Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07761.t1 | XP_013444323.1 | 98.8 | 586 | 7 | 0 | 1 | 586 | 1 | 586 | 0.00E+00 | 1178.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07761.t1 | Q9S746 | 69.4 | 533 | 163 | 0 | 54 | 586 | 62 | 594 | 4.4e-218 | 758.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07761.t1 | A0A072TXW2 | 98.8 | 586 | 7 | 0 | 1 | 586 | 1 | 586 | 0.0e+00 | 1178.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049369 | MS.gene07761 | 0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene07761 | 0.810401 | 1.17E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene07761 | 0.801508 | 8.71E-49 | -1.69E-46 |
| MS.gene049828 | MS.gene07761 | 0.80255 | 5.32E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene07761 | 0.826591 | 2.49E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene07761 | 0.86518 | 7.12E-65 | -1.69E-46 |
| MS.gene050301 | MS.gene07761 | 0.846926 | 1.60E-59 | -1.69E-46 |
| MS.gene050581 | MS.gene07761 | 0.837506 | 4.99E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene07761 | 0.816526 | 5.29E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene07761 | 0.815048 | 1.13E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene07761 | 0.807237 | 5.57E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene07761 | 0.838138 | 3.44E-57 | -1.69E-46 |
| MS.gene051360 | MS.gene07761 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene051692 | MS.gene07761 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene07761 | 0.842116 | 3.15E-58 | -1.69E-46 |
| MS.gene052287 | MS.gene07761 | 0.843832 | 1.10E-58 | -1.69E-46 |
| MS.gene052326 | MS.gene07761 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene07761 | 0.810655 | 1.03E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene07761 | 0.806383 | 8.45E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene07761 | 0.832381 | 9.76E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene07761 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene053813 | MS.gene07761 | 0.855146 | 7.67E-62 | -1.69E-46 |
| MS.gene054010 | MS.gene07761 | 0.872217 | 3.77E-67 | -1.69E-46 |
| MS.gene054011 | MS.gene07761 | 0.867315 | 1.50E-65 | -1.69E-46 |
| MS.gene054012 | MS.gene07761 | 0.87056 | 1.33E-66 | -1.69E-46 |
| MS.gene054013 | MS.gene07761 | 0.87566 | 2.59E-68 | -1.69E-46 |
| MS.gene054214 | MS.gene07761 | 0.820506 | 6.62E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene07761 | 0.822431 | 2.38E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene07761 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene07761 | 0.821816 | 3.30E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene07761 | 0.842485 | 2.51E-58 | -1.69E-46 |
| MS.gene055802 | MS.gene07761 | 0.811719 | 6.08E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene07761 | 0.853327 | 2.57E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene07761 | 0.873863 | 1.06E-67 | -1.69E-46 |
| MS.gene056611 | MS.gene07761 | 0.826191 | 3.11E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene07761 | 0.857147 | 1.99E-62 | -1.69E-46 |
| MS.gene056931 | MS.gene07761 | 0.863154 | 3.05E-64 | -1.69E-46 |
| MS.gene056933 | MS.gene07761 | 0.860746 | 1.67E-63 | -1.69E-46 |
| MS.gene056935 | MS.gene07761 | 0.848439 | 6.13E-60 | -1.69E-46 |
| MS.gene05733 | MS.gene07761 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene057449 | MS.gene07761 | 0.802882 | 4.54E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene07761 | 0.807382 | 5.19E-50 | -1.69E-46 |
| MS.gene057779 | MS.gene07761 | 0.805932 | 1.05E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene07761 | 0.815397 | 9.44E-52 | -1.69E-46 |
| MS.gene05806 | MS.gene07761 | 0.814162 | 1.77E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene07761 | 0.836465 | 9.21E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene07761 | 0.806513 | 7.93E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene07761 | 0.81702 | 4.09E-52 | -1.69E-46 |
| MS.gene058459 | MS.gene07761 | 0.810544 | 1.09E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene07761 | 0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene058903 | MS.gene07761 | 0.821736 | 3.45E-53 | -1.69E-46 |
| MS.gene058995 | MS.gene07761 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene07761 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene07761 | 0.858999 | 5.60E-63 | -1.69E-46 |
| MS.gene059530 | MS.gene07761 | 0.830329 | 3.12E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene07761 | 0.815958 | 7.08E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene07761 | 0.802336 | 5.89E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene07761 | 0.817055 | 4.02E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene07761 | 0.815543 | 8.76E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene07761 | 0.832741 | 7.95E-56 | -1.69E-46 |
| MS.gene059807 | MS.gene07761 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene07761 | 0.900958 | 4.35E-78 | -1.69E-46 |
| MS.gene060005 | MS.gene07761 | 0.879699 | 1.01E-69 | -1.69E-46 |
| MS.gene060356 | MS.gene07761 | 0.808304 | 3.31E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene07761 | 0.858077 | 1.06E-62 | -1.69E-46 |
| MS.gene060559 | MS.gene07761 | 0.849881 | 2.43E-60 | -1.69E-46 |
| MS.gene060799 | MS.gene07761 | 0.837706 | 4.44E-57 | -1.69E-46 |
| MS.gene060800 | MS.gene07761 | 0.862356 | 5.37E-64 | -1.69E-46 |
| MS.gene060801 | MS.gene07761 | 0.847477 | 1.13E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene07761 | 0.819035 | 1.44E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene07761 | 0.815348 | 9.68E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07761 | MS.gene98150 | PPI |
| MS.gene07761 | MS.gene034273 | PPI |
| MS.gene07761 | MS.gene34288 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07761.t1 | MTR_8g016320 | 98.805 | 586 | 7 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1199 |
| MS.gene07761.t1 | MTR_2g100070 | 77.983 | 595 | 121 | 4 | 1 | 586 | 1 | 594 | 0.0 | 960 |
| MS.gene07761.t1 | MTR_5g011020 | 56.121 | 531 | 226 | 3 | 55 | 581 | 13 | 540 | 0.0 | 613 |
| MS.gene07761.t1 | MTR_5g011010 | 55.026 | 567 | 234 | 7 | 23 | 580 | 20 | 574 | 0.0 | 612 |
| MS.gene07761.t1 | MTR_1g101770 | 51.060 | 566 | 262 | 7 | 21 | 582 | 20 | 574 | 0.0 | 555 |
| MS.gene07761.t1 | MTR_4g005860 | 44.909 | 550 | 240 | 11 | 55 | 582 | 54 | 562 | 1.08e-142 | 425 |
| MS.gene07761.t1 | MTR_5g041340 | 40.238 | 589 | 264 | 12 | 7 | 579 | 15 | 531 | 1.12e-130 | 393 |
| MS.gene07761.t1 | MTR_1g101760 | 43.006 | 479 | 195 | 9 | 21 | 475 | 20 | 444 | 7.33e-114 | 347 |
| MS.gene07761.t1 | MTR_5g024110 | 73.333 | 60 | 16 | 0 | 187 | 246 | 19 | 78 | 4.24e-22 | 92.8 |
| MS.gene07761.t1 | MTR_5g082740 | 84.211 | 38 | 6 | 0 | 213 | 250 | 13 | 50 | 7.10e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07761.t1 | AT1G72970 | 68.929 | 560 | 169 | 3 | 31 | 586 | 36 | 594 | 0.0 | 778 |
| MS.gene07761.t1 | AT1G72970 | 66.250 | 560 | 157 | 4 | 31 | 586 | 36 | 567 | 0.0 | 734 |
| MS.gene07761.t1 | AT1G12570 | 51.552 | 580 | 255 | 9 | 8 | 580 | 9 | 569 | 0.0 | 563 |
| MS.gene07761.t1 | AT3G56060 | 51.625 | 554 | 249 | 7 | 32 | 581 | 31 | 569 | 0.0 | 546 |
| MS.gene07761.t1 | AT5G51950 | 49.396 | 579 | 271 | 9 | 14 | 579 | 5 | 574 | 0.0 | 535 |
| MS.gene07761.t1 | AT5G51950 | 48.881 | 581 | 273 | 8 | 14 | 579 | 5 | 576 | 0.0 | 534 |
| MS.gene07761.t1 | AT5G51950 | 51.887 | 530 | 249 | 5 | 55 | 579 | 13 | 541 | 0.0 | 534 |
| MS.gene07761.t1 | AT5G51930 | 50.540 | 556 | 252 | 9 | 29 | 579 | 8 | 545 | 2.14e-180 | 521 |
| MS.gene07761.t1 | AT5G51930 | 50.277 | 541 | 254 | 7 | 34 | 569 | 52 | 582 | 4.89e-174 | 506 |
| MS.gene07761.t1 | AT1G73050 | 45.307 | 554 | 253 | 12 | 34 | 580 | 41 | 551 | 2.42e-152 | 449 |
| MS.gene07761.t1 | AT1G14190 | 41.264 | 538 | 237 | 10 | 53 | 579 | 14 | 483 | 1.03e-127 | 384 |
| MS.gene07761.t1 | AT1G14190 | 39.794 | 583 | 259 | 14 | 8 | 579 | 3 | 504 | 1.24e-127 | 385 |
| MS.gene07761.t1 | AT1G14185 | 42.007 | 538 | 230 | 10 | 53 | 578 | 35 | 502 | 5.62e-127 | 382 |
Find 134 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGTTATGCTTAATTCTA+TGG | 0.207984 | 8.1:-81377332 | MS.gene07761:CDS |
| CTCAATGTATATACCTTTCT+TGG | 0.222864 | 8.1:+81368483 | None:intergenic |
| CATCAGTTGAAACAAAATAT+TGG | 0.263596 | 8.1:+81375795 | None:intergenic |
| AAAATAACCCCTATAGCTTT+TGG | 0.265030 | 8.1:+81368772 | None:intergenic |
| AAGACACTGTTATCACAATT+TGG | 0.265270 | 8.1:-81367844 | MS.gene07761:CDS |
| TCCCAACAAAAGGATTATTA+AGG | 0.280926 | 8.1:+81368593 | None:intergenic |
| GGTAGTTAGTCCTGATTATA+AGG | 0.296398 | 8.1:-81367792 | MS.gene07761:CDS |
| GCTGCCGAACTTCTTGCTTC+TGG | 0.307768 | 8.1:-81372109 | MS.gene07761:CDS |
| TTCTGAAGAAATGTTACATT+TGG | 0.311997 | 8.1:+81375860 | None:intergenic |
| GAGAGACTCCATTGTCTATA+AGG | 0.313156 | 8.1:+81372215 | None:intergenic |
| TTCACCTATGATCATATATA+TGG | 0.316069 | 8.1:-81372181 | MS.gene07761:CDS |
| GGAAGATTGGCTGGTATATA+AGG | 0.322423 | 8.1:-81367545 | None:intergenic |
| AAGTTCTGAAGTTCAACTTT+AGG | 0.335800 | 8.1:+81368631 | None:intergenic |
| CCCTGACAAACTGACTGTTT+TGG | 0.340997 | 8.1:-81372083 | MS.gene07761:CDS |
| TGTTCCATATATATGATCAT+AGG | 0.344794 | 8.1:+81372177 | None:intergenic |
| GAGAGATAGGTTGGGAAGAT+TGG | 0.344950 | 8.1:-81367558 | MS.gene07761:CDS |
| CCACTTAGCAATAGCATTTG+AGG | 0.351329 | 8.1:+81368661 | None:intergenic |
| TCATAGGTGAAACCATTAAA+AGG | 0.352465 | 8.1:+81372193 | None:intergenic |
| GTAAAAGACCAAAAGCTATA+GGG | 0.355550 | 8.1:-81368780 | MS.gene07761:CDS |
| ATCAGTTGAAACAAAATATT+GGG | 0.358528 | 8.1:+81375796 | None:intergenic |
| ATGCTATTGCTAAGTGGAAT+TGG | 0.367928 | 8.1:-81368655 | MS.gene07761:CDS |
| CTTTGAAATGGTGAAAACTT+TGG | 0.370638 | 8.1:+81372253 | None:intergenic |
| GTGGCTTGAGGATTTGTTCC+TGG | 0.372285 | 8.1:+81367716 | None:intergenic |
| ATTGATGTAGTTGAAATTGA+TGG | 0.375829 | 8.1:+81376004 | None:intergenic |
| CACCATTTCAAAGAGCAGTT+AGG | 0.377077 | 8.1:-81372243 | MS.gene07761:CDS |
| ACCAAAACAGTCAGTTTGTC+AGG | 0.378706 | 8.1:+81372082 | None:intergenic |
| GGTAAAAGACCAAAAGCTAT+AGG | 0.384043 | 8.1:-81368781 | MS.gene07761:CDS |
| AACTTCTATTGATCTTTGCT+TGG | 0.387184 | 8.1:+81368219 | None:intergenic |
| TGACCAAGCACTGCCAACTT+TGG | 0.396020 | 8.1:+81368129 | None:intergenic |
| GTTGTGTCATTGGCATGTTT+TGG | 0.396676 | 8.1:+81367887 | None:intergenic |
| CTCTAGGGAAGTTGTGTCAT+TGG | 0.417433 | 8.1:+81367877 | None:intergenic |
| ACCATTTCAAAGAGCAGTTA+GGG | 0.418863 | 8.1:-81372242 | MS.gene07761:CDS |
| ACTTCTATTGATCTTTGCTT+GGG | 0.420945 | 8.1:+81368220 | None:intergenic |
| ATCATTCCCTTCCCAACAAA+AGG | 0.421128 | 8.1:+81368583 | None:intergenic |
| TCCCTAACTGCTCTTTGAAA+TGG | 0.424341 | 8.1:+81372241 | None:intergenic |
| AGCTTATGATTACATAATAG+TGG | 0.425179 | 8.1:-81375975 | MS.gene07761:CDS |
| TGATGAACTGGCCTATTAGA+AGG | 0.425489 | 8.1:+81368532 | None:intergenic |
| TATGCTTAATTCTATGGCTA+TGG | 0.429582 | 8.1:-81377326 | MS.gene07761:CDS |
| ATATTGTCTAGTGGGGCAAT+TGG | 0.437071 | 8.1:-81368688 | MS.gene07761:CDS |
| TGAGATAATGTTGCAGCTAA+AGG | 0.437925 | 8.1:+81375932 | None:intergenic |
| CATATATATGGAACAAAAGT+TGG | 0.443993 | 8.1:-81372169 | MS.gene07761:CDS |
| TGTCCAAAGTTGGCAGTGCT+TGG | 0.445458 | 8.1:-81368132 | MS.gene07761:CDS |
| TTTATGTTTGTACAGGTACA+TGG | 0.453526 | 8.1:-81367594 | MS.gene07761:intron |
| ACATCAAGAACCTTATAATC+AGG | 0.455898 | 8.1:+81367782 | None:intergenic |
| TATTGTCTAGTGGGGCAATT+GGG | 0.458461 | 8.1:-81368687 | MS.gene07761:CDS |
| GATAGGTTGGGAAGATTGGC+TGG | 0.469904 | 8.1:-81367554 | MS.gene07761:CDS |
| GGCTTTGTCTTGTCCAAAGT+TGG | 0.471094 | 8.1:-81368142 | MS.gene07761:CDS |
| TGTCTTTGCAGAATTGCTCT+AGG | 0.474027 | 8.1:+81367861 | None:intergenic |
| GTTTCCAGAAGCAAGAAGTT+CGG | 0.478164 | 8.1:+81372105 | None:intergenic |
| ATAGTGGGAGGTGGAACTGC+AGG | 0.480876 | 8.1:-81375959 | MS.gene07761:CDS |
| CATACCGGTTGAAGCATTCA+AGG | 0.487710 | 8.1:-81368167 | MS.gene07761:CDS |
| TGCAGGTTTATAAACAAGGC+AGG | 0.495373 | 8.1:-81372337 | MS.gene07761:intron |
| GTTACATTTGGATTAGTGAA+AGG | 0.501737 | 8.1:+81375872 | None:intergenic |
| TCACAGTAGTCTTCACACTA+AGG | 0.504403 | 8.1:+81367918 | None:intergenic |
| TGTATGAGTGACTGATGAAC+TGG | 0.507225 | 8.1:+81368520 | None:intergenic |
| CCTCCCTTGAATGCTTCAAC+CGG | 0.507817 | 8.1:+81368163 | None:intergenic |
| GTGAAGTGATATTGTCTAGT+GGG | 0.511977 | 8.1:-81368696 | MS.gene07761:CDS |
| GTTGGCAGTGCTTGGTCAGT+AGG | 0.515504 | 8.1:-81368124 | MS.gene07761:CDS |
| ATCTGAAGCGCTGCGTCGAA+GGG | 0.519425 | 8.1:-81368027 | MS.gene07761:CDS |
| GGAGGTAGTTCTATCAATGC+TGG | 0.520008 | 8.1:-81375740 | MS.gene07761:CDS |
| ACTGTAGGTATCACCAAGAA+AGG | 0.520351 | 8.1:-81368496 | MS.gene07761:CDS |
| AGTAAATGAGTCATACCCTT+GGG | 0.521799 | 8.1:-81372299 | MS.gene07761:CDS |
| GAAGAATAAGCGAGACATAC+CGG | 0.522534 | 8.1:-81368182 | MS.gene07761:CDS |
| AGTGTATTAGTACTTGAAAG+AGG | 0.535526 | 8.1:-81375902 | MS.gene07761:CDS |
| CCTCAAATGCTATTGCTAAG+TGG | 0.535945 | 8.1:-81368661 | MS.gene07761:CDS |
| GACAGACTCCGAGTCGTCGA+TGG | 0.540302 | 8.1:-81367758 | MS.gene07761:CDS |
| AGTTTGTGAAGTGTTCTGAC+TGG | 0.541458 | 8.1:+81367981 | None:intergenic |
| ATGGCAGTGAATGCTGCTGT+TGG | 0.541836 | 8.1:+81368438 | None:intergenic |
| TCAAGCCACTGTGATGATGA+TGG | 0.542953 | 8.1:-81367702 | MS.gene07761:CDS |
| ACTGTACCAACTGAAGCCAT+TGG | 0.544672 | 8.1:+81377360 | None:intergenic |
| GTTTATAAACAAGGCAGGGT+GGG | 0.546987 | 8.1:-81372332 | MS.gene07761:CDS |
| TCTATTGATCTTTGCTTGGG+AGG | 0.547038 | 8.1:+81368223 | None:intergenic |
| GTCTTTGCAGAATTGCTCTA+GGG | 0.551481 | 8.1:+81367862 | None:intergenic |
| AACTTTCTACCTCATTGTCA+AGG | 0.552525 | 8.1:-81377297 | MS.gene07761:intron |
| CCAAAACAGTCAGTTTGTCA+GGG | 0.555053 | 8.1:+81372083 | None:intergenic |
| GAAACAACATGAGGCAAGGT+TGG | 0.555365 | 8.1:-81368734 | MS.gene07761:CDS |
| ATATATGGAACAAAAGTTGG+TGG | 0.555460 | 8.1:-81372166 | MS.gene07761:CDS |
| AGCAGCATTCACTGCCATCA+TGG | 0.557126 | 8.1:-81368433 | MS.gene07761:CDS |
| ACGTTGAACCATCGACGACT+CGG | 0.557454 | 8.1:+81367750 | None:intergenic |
| GATCTGAAGCGCTGCGTCGA+AGG | 0.557566 | 8.1:-81368028 | MS.gene07761:CDS |
| ACAATTTGCTTCTCAACCCA+AGG | 0.558080 | 8.1:+81372283 | None:intergenic |
| ACGCAGCGCTTCAGATCGTA+TGG | 0.564086 | 8.1:+81368034 | None:intergenic |
| TGGATGACTGAAGTAGTTGA+AGG | 0.572474 | 8.1:+81368054 | None:intergenic |
| TGGTGGATGTCATGTGGGGA+AGG | 0.574542 | 8.1:-81367813 | MS.gene07761:CDS |
| TCAGAACTTCCACATTACCT+TGG | 0.575737 | 8.1:-81375843 | MS.gene07761:CDS |
| TACCATGGTGGATGTCATGT+GGG | 0.575939 | 8.1:-81367818 | MS.gene07761:CDS |
| TAAAAGACCAAAAGCTATAG+GGG | 0.577729 | 8.1:-81368779 | MS.gene07761:CDS |
| AAATATTGGGATGCTGAAGT+TGG | 0.582484 | 8.1:+81375809 | None:intergenic |
| GAAATTCCAATGGCTTCAGT+TGG | 0.585684 | 8.1:-81377366 | None:intergenic |
| TAGTAAATGAGTCATACCCT+TGG | 0.585979 | 8.1:-81372300 | MS.gene07761:CDS |
| GAAGTTCGGCAGCTGTATGT+CGG | 0.587570 | 8.1:+81372119 | None:intergenic |
| ATCACAATTTGGCATTACCA+TGG | 0.588471 | 8.1:-81367833 | MS.gene07761:CDS |
| AAGTAGTTGAAGGTAACAGC+AGG | 0.592244 | 8.1:+81368064 | None:intergenic |
| TTATGTTTGTACAGGTACAT+GGG | 0.592434 | 8.1:-81367593 | MS.gene07761:intron |
| AAAGGTCTGCCAAGGTAATG+TGG | 0.593850 | 8.1:+81375834 | None:intergenic |
| GTCAGTAGGTGAGCTCAAGT+TGG | 0.595081 | 8.1:-81368110 | MS.gene07761:CDS |
| GATTACATAATAGTGGGAGG+TGG | 0.596948 | 8.1:-81375968 | MS.gene07761:CDS |
| GCTTATGATTACATAATAGT+GGG | 0.598220 | 8.1:-81375974 | MS.gene07761:CDS |
| TTACCATGGTGGATGTCATG+TGG | 0.600001 | 8.1:-81367819 | MS.gene07761:CDS |
| ATCATCATCACAGTGGCTTG+AGG | 0.602679 | 8.1:+81367704 | None:intergenic |
| CAAGAAAGGTATATACATTG+AGG | 0.602724 | 8.1:-81368482 | MS.gene07761:CDS |
| GGCATGCAGGTTTATAAACA+AGG | 0.603259 | 8.1:-81372341 | MS.gene07761:intron |
| AGCAGGATTGTCATTCACAT+TGG | 0.603483 | 8.1:+81368081 | None:intergenic |
| AAGAATGAACCTTGACAATG+AGG | 0.604252 | 8.1:+81377288 | None:intergenic |
| ATATACATTGAGGCTAGTAG+TGG | 0.605558 | 8.1:-81368472 | MS.gene07761:CDS |
| CAAGCCACTGTGATGATGAT+GGG | 0.617926 | 8.1:-81367701 | MS.gene07761:CDS |
| CAGTCACTCATACAAACTGT+AGG | 0.619113 | 8.1:-81368511 | MS.gene07761:CDS |
| GGTTTATAAACAAGGCAGGG+TGG | 0.624131 | 8.1:-81372333 | MS.gene07761:CDS |
| ACAATTTGGCATTACCATGG+TGG | 0.626064 | 8.1:-81367830 | MS.gene07761:CDS |
| ATGGGAAACAACATGAGGCA+AGG | 0.628125 | 8.1:-81368738 | MS.gene07761:CDS |
| TAGTGGGAGGTGGAACTGCA+GGG | 0.634105 | 8.1:-81375958 | MS.gene07761:CDS |
| TCTATACTAGAGCAAGCTCA+AGG | 0.634433 | 8.1:-81375715 | MS.gene07761:intron |
| TCAACGTTTACTGAATCACC+AGG | 0.636189 | 8.1:-81367734 | MS.gene07761:CDS |
| AGTTGGTGAAAGGTCTGCCA+AGG | 0.638962 | 8.1:+81375826 | None:intergenic |
| AGTGAAGTGATATTGTCTAG+TGG | 0.640229 | 8.1:-81368697 | MS.gene07761:CDS |
| TGAAGTGATATTGTCTAGTG+GGG | 0.641566 | 8.1:-81368695 | MS.gene07761:CDS |
| CAATTTGCTTCTCAACCCAA+GGG | 0.641897 | 8.1:+81372284 | None:intergenic |
| AGGGATAGCCTTATAGACAA+TGG | 0.642396 | 8.1:-81372223 | MS.gene07761:CDS |
| GCAGGTTTATAAACAAGGCA+GGG | 0.645860 | 8.1:-81372336 | MS.gene07761:intron |
| CAGGTGACATGATACCATGA+TGG | 0.646745 | 8.1:+81368419 | None:intergenic |
| CCGGTTGAAGCATTCAAGGG+AGG | 0.653682 | 8.1:-81368163 | MS.gene07761:CDS |
| ATACCGGTTGAAGCATTCAA+GGG | 0.659872 | 8.1:-81368166 | MS.gene07761:CDS |
| TATGATTACATAATAGTGGG+AGG | 0.665381 | 8.1:-81375971 | MS.gene07761:CDS |
| CCACTGTGATGATGATGGGA+AGG | 0.666047 | 8.1:-81367697 | MS.gene07761:intron |
| TCATGGTATCATGTCACCTG+AGG | 0.666139 | 8.1:-81368416 | MS.gene07761:intron |
| CTGCGTCGAAGGGATCAGCA+TGG | 0.676042 | 8.1:-81368017 | MS.gene07761:CDS |
| GTATTAGTACTTGAAAGAGG+TGG | 0.684983 | 8.1:-81375899 | MS.gene07761:CDS |
| TGAAAATGGGAAACAACATG+AGG | 0.689884 | 8.1:-81368743 | MS.gene07761:CDS |
| GGGATGCTGAAGTTGGTGAA+AGG | 0.694848 | 8.1:+81375816 | None:intergenic |
| TCCCCACATGACATCCACCA+TGG | 0.705965 | 8.1:+81367816 | None:intergenic |
| TCAGAACTTGAATATCTCAG+TGG | 0.710333 | 8.1:-81368617 | MS.gene07761:CDS |
| ACCATGGTGGATGTCATGTG+GGG | 0.735002 | 8.1:-81367817 | MS.gene07761:CDS |
| AAGGTTAAGAAGTCTCTCTG+CGG | 0.750641 | 8.1:+81367937 | None:intergenic |
| CCTTCCCATCATCATCACAG+TGG | 0.775919 | 8.1:+81367697 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 81367547 | 81377379 | 81367547 | ID=MS.gene07761 |
| chr8.1 | mRNA | 81367547 | 81377379 | 81367547 | ID=MS.gene07761.t1;Parent=MS.gene07761 |
| chr8.1 | exon | 81377298 | 81377379 | 81377298 | ID=MS.gene07761.t1.exon1;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81377298 | 81377379 | 81377298 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| chr8.1 | exon | 81375716 | 81376073 | 81375716 | ID=MS.gene07761.t1.exon2;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81375716 | 81376073 | 81375716 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| chr8.1 | exon | 81372044 | 81372354 | 81372044 | ID=MS.gene07761.t1.exon3;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81372044 | 81372354 | 81372044 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| chr8.1 | exon | 81368417 | 81368802 | 81368417 | ID=MS.gene07761.t1.exon4;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81368417 | 81368802 | 81368417 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| chr8.1 | exon | 81367698 | 81368266 | 81367698 | ID=MS.gene07761.t1.exon5;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81367698 | 81368266 | 81367698 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| chr8.1 | exon | 81367547 | 81367601 | 81367547 | ID=MS.gene07761.t1.exon6;Parent=MS.gene07761.t1 |
| chr8.1 | CDS | 81367547 | 81367601 | 81367547 | ID=cds.MS.gene07761.t1;Parent=MS.gene07761.t1 |
| Gene Sequence |
| Protein sequence |
