Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34302.t1 | XP_013454502.1 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 3.10E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34302.t1 | Q9FZ45 | 71.2 | 483 | 127 | 3 | 1 | 480 | 1 | 474 | 2.4e-177 | 623.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34302.t1 | A0A072UHD8 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 2.2e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053281 | MS.gene34302 | 0.924589 | 5.76E-90 | -1.69E-46 |
| MS.gene053283 | MS.gene34302 | 0.995851 | 1.37E-220 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34302.t1 | MTR_4g005510 | 99.167 | 480 | 2 | 1 | 1 | 480 | 1 | 478 | 0.0 | 969 |
| MS.gene34302.t1 | MTR_4g007930 | 79.098 | 488 | 93 | 3 | 1 | 480 | 1 | 487 | 0.0 | 785 |
| MS.gene34302.t1 | MTR_4g007930 | 70.697 | 488 | 83 | 4 | 1 | 480 | 1 | 436 | 0.0 | 678 |
| MS.gene34302.t1 | MTR_2g025190 | 48.866 | 485 | 186 | 10 | 1 | 480 | 1 | 428 | 6.09e-150 | 434 |
| MS.gene34302.t1 | MTR_4g094505 | 98.148 | 108 | 2 | 0 | 345 | 452 | 36 | 143 | 6.64e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34302.t1 | AT1G16860 | 74.433 | 485 | 108 | 6 | 1 | 480 | 1 | 474 | 0.0 | 717 |
| MS.gene34302.t1 | AT1G78880 | 74.433 | 485 | 102 | 7 | 1 | 480 | 1 | 468 | 0.0 | 716 |
| MS.gene34302.t1 | AT4G22290 | 49.170 | 482 | 206 | 8 | 1 | 480 | 1 | 445 | 2.39e-148 | 431 |
Find 139 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 4.3:+88971125 | MS.gene34302:CDS |
| CTTGAAGGAGCGTTGTTTAA+TGG | 0.228567 | 4.3:-88970462 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 4.3:+88970390 | MS.gene34302:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 4.3:-88970324 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 4.3:+88973835 | MS.gene34302:CDS |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 4.3:-88971117 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 4.3:+88970765 | MS.gene34302:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 4.3:-88970372 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 4.3:+88970480 | MS.gene34302:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 4.3:+88970744 | MS.gene34302:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 4.3:+88973712 | MS.gene34302:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 4.3:+88970438 | MS.gene34302:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 4.3:+88973834 | MS.gene34302:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 4.3:-88970714 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 4.3:-88973836 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.377574 | 4.3:+88970936 | MS.gene34302:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 4.3:-88970903 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 4.3:-88970692 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 4.3:+88973736 | MS.gene34302:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 4.3:-88970705 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 4.3:+88970783 | MS.gene34302:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 4.3:-88970789 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 4.3:-88973835 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 4.3:-88970988 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 4.3:+88973742 | MS.gene34302:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 4.3:+88974007 | MS.gene34302:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 4.3:-88970909 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 4.3:-88970333 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 4.3:+88970711 | MS.gene34302:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 4.3:+88971126 | MS.gene34302:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 4.3:-88970723 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 4.3:-88974126 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 4.3:+88970629 | MS.gene34302:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 4.3:+88970530 | MS.gene34302:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 4.3:-88970995 | None:intergenic |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 4.3:-88973726 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 4.3:+88970726 | MS.gene34302:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 4.3:-88971095 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 4.3:+88971024 | MS.gene34302:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 4.3:-88970648 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 4.3:+88970871 | MS.gene34302:CDS |
| ACAATACCTTCAAGGCTAGC+TGG | 0.445053 | 4.3:-88974118 | None:intergenic |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 4.3:+88970784 | MS.gene34302:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 4.3:+88970657 | MS.gene34302:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 4.3:+88973836 | MS.gene34302:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 4.3:-88970902 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 4.3:+88970498 | MS.gene34302:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 4.3:+88970391 | MS.gene34302:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 4.3:+88973883 | MS.gene34302:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 4.3:+88974070 | MS.gene34302:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 4.3:-88971516 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 4.3:-88970477 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 4.3:-88974073 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 4.3:+88970745 | MS.gene34302:CDS |
| GGGGACATGTCTTTATTCTC+CGG | 0.465892 | 4.3:-88973814 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 4.3:+88971056 | MS.gene34302:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 4.3:+88970680 | MS.gene34302:CDS |
| CATTAAACAACGCTCCTTCA+AGG | 0.481983 | 4.3:+88970463 | MS.gene34302:CDS |
| CGTTGTAATTGATGTCAATC+CGG | 0.482923 | 4.3:+88973795 | MS.gene34302:CDS |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 4.3:+88970546 | MS.gene34302:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 4.3:+88971460 | MS.gene34302:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 4.3:-88970799 | None:intergenic |
| ATGTTTGATATTCCTATGGA+TGG | 0.490543 | 4.3:+88970417 | MS.gene34302:CDS |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 4.3:+88974006 | MS.gene34302:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 4.3:-88974079 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 4.3:-88974089 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 4.3:-88970771 | None:intergenic |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 4.3:-88974067 | None:intergenic |
| GAAAATGTTTGATATTCCTA+TGG | 0.498329 | 4.3:+88970413 | MS.gene34302:CDS |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 4.3:+88970592 | MS.gene34302:CDS |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 4.3:-88973778 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 4.3:-88970348 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 4.3:+88970381 | MS.gene34302:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 4.3:-88971439 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 4.3:+88973726 | MS.gene34302:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 4.3:-88970886 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 4.3:+88970564 | MS.gene34302:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 4.3:+88970322 | MS.gene34302:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 4.3:+88970663 | MS.gene34302:CDS |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 4.3:+88971104 | MS.gene34302:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 4.3:+88970297 | MS.gene34302:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 4.3:+88970360 | MS.gene34302:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 4.3:+88970645 | MS.gene34302:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 4.3:+88973750 | MS.gene34302:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 4.3:-88970282 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 4.3:+88973749 | MS.gene34302:CDS |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 4.3:+88970296 | MS.gene34302:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 4.3:+88970758 | MS.gene34302:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 4.3:-88970749 | None:intergenic |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 4.3:+88971464 | MS.gene34302:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 4.3:-88973843 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.546115 | 4.3:-88970429 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 4.3:+88970256 | None:intergenic |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 4.3:+88971042 | MS.gene34302:CDS |
| AACAACGCTCCTTCAAGGAC+TGG | 0.554039 | 4.3:+88970468 | MS.gene34302:CDS |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 4.3:-88970305 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 4.3:-88971458 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 4.3:-88971524 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 4.3:-88973867 | None:intergenic |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 4.3:+88970754 | MS.gene34302:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 4.3:+88970660 | MS.gene34302:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 4.3:-88970281 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 4.3:-88970849 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 4.3:+88971118 | MS.gene34302:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 4.3:-88970320 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 4.3:-88974070 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 4.3:+88971465 | MS.gene34302:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 4.3:+88970681 | MS.gene34302:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 4.3:-88971398 | None:intergenic |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 4.3:+88971038 | MS.gene34302:CDS |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 4.3:-88970627 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 4.3:+88974080 | MS.gene34302:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 4.3:-88970379 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 4.3:+88970939 | MS.gene34302:CDS |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 4.3:+88970603 | MS.gene34302:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 4.3:-88970367 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 4.3:-88970750 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 4.3:+88970282 | MS.gene34302:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 4.3:+88973884 | MS.gene34302:CDS |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 4.3:+88973681 | MS.gene34302:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 4.3:+88970622 | MS.gene34302:CDS |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 4.3:-88970711 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 4.3:-88970661 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 4.3:+88971127 | MS.gene34302:CDS |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 4.3:-88973834 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 4.3:+88970621 | MS.gene34302:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 4.3:+88971090 | MS.gene34302:CDS |
| CGGATTGACATCAATTACAA+CGG | 0.656746 | 4.3:-88973794 | None:intergenic |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 4.3:+88970746 | MS.gene34302:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 4.3:+88973994 | MS.gene34302:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 4.3:+88974081 | MS.gene34302:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 4.3:+88970363 | MS.gene34302:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 4.3:+88971525 | MS.gene34302:CDS |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 4.3:+88970898 | MS.gene34302:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 4.3:-88970980 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 4.3:-88970669 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 4.3:+88970851 | MS.gene34302:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 4.3:-88973833 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 4.3:+88970623 | MS.gene34302:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTCTTTCAAATAA+AGG | - | chr4.3:88973292-88973311 | None:intergenic | 10.0% |
| !! | AACTTATATACAATGAATTT+GGG | + | chr4.3:88971813-88971832 | MS.gene34302:intron | 15.0% |
| !! | TAACTTATATACAATGAATT+TGG | + | chr4.3:88971812-88971831 | MS.gene34302:intron | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | + | chr4.3:88973221-88973240 | MS.gene34302:intron | 15.0% |
| !!! | ATAATTATTTCTTTCTTGTT+TGG | + | chr4.3:88973167-88973186 | MS.gene34302:intron | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | + | chr4.3:88973013-88973032 | MS.gene34302:intron | 15.0% |
| !!! | TAATTATTTCTTTCTTGTTT+GGG | + | chr4.3:88973168-88973187 | MS.gene34302:intron | 15.0% |
| !! | AAAGAATTACTACAACAATA+AGG | - | chr4.3:88970998-88971017 | None:intergenic | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | - | chr4.3:88971640-88971659 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | - | chr4.3:88973213-88973232 | None:intergenic | 20.0% |
| !! | CAAAAGTTAGAATATATCAA+TGG | - | chr4.3:88971368-88971387 | None:intergenic | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | - | chr4.3:88973674-88973693 | None:intergenic | 20.0% |
| !! | TAGATTATACCATGTAATTA+GGG | - | chr4.3:88971794-88971813 | None:intergenic | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | - | chr4.3:88973080-88973099 | None:intergenic | 20.0% |
| !! | TTAGATTATACCATGTAATT+AGG | - | chr4.3:88971795-88971814 | None:intergenic | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | + | chr4.3:88971916-88971935 | MS.gene34302:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | + | chr4.3:88971917-88971936 | MS.gene34302:intron | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | + | chr4.3:88973023-88973042 | MS.gene34302:intron | 20.0% |
| !!! | TGATATATTCTAACTTTTGA+AGG | + | chr4.3:88971369-88971388 | MS.gene34302:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | - | chr4.3:88972540-88972559 | None:intergenic | 20.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | + | chr4.3:88973951-88973970 | MS.gene34302:intron | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | - | chr4.3:88972483-88972502 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | + | chr4.3:88971782-88971801 | MS.gene34302:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | + | chr4.3:88971883-88971902 | MS.gene34302:intron | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | + | chr4.3:88972726-88972745 | MS.gene34302:intron | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | - | chr4.3:88972729-88972748 | None:intergenic | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | - | chr4.3:88971966-88971985 | None:intergenic | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | + | chr4.3:88971884-88971903 | MS.gene34302:intron | 25.0% |
| ! | GAAAATGTTTGATATTCCTA+TGG | + | chr4.3:88970413-88970432 | MS.gene34302:CDS | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | + | chr4.3:88973559-88973578 | MS.gene34302:intron | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | - | chr4.3:88973541-88973560 | None:intergenic | 25.0% |
| ! | TTCAAATCATGAATGATTGA+TGG | + | chr4.3:88971335-88971354 | MS.gene34302:intron | 25.0% |
| ! | TTTCTTTCAATCTACAGTAA+GGG | - | chr4.3:88972595-88972614 | None:intergenic | 25.0% |
| !! | AATGCAAATTGCATATTTTG+GGG | + | chr4.3:88973602-88973621 | MS.gene34302:intron | 25.0% |
| !! | AGAATGCAAATTGCATATTT+TGG | + | chr4.3:88973600-88973619 | MS.gene34302:intron | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | + | chr4.3:88972067-88972086 | MS.gene34302:intron | 25.0% |
| !! | GAATGCAAATTGCATATTTT+GGG | + | chr4.3:88973601-88973620 | MS.gene34302:intron | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | - | chr4.3:88971729-88971748 | None:intergenic | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | + | chr4.3:88972068-88972087 | MS.gene34302:intron | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | - | chr4.3:88972458-88972477 | None:intergenic | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | + | chr4.3:88973322-88973341 | MS.gene34302:intron | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | - | chr4.3:88972459-88972478 | None:intergenic | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | + | chr4.3:88973986-88974005 | MS.gene34302:intron | 25.0% |
| !!! | TATATTCTAACTTTTGAAGG+TGG | + | chr4.3:88971372-88971391 | MS.gene34302:intron | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | + | chr4.3:88973537-88973556 | MS.gene34302:intron | 25.0% |
| AAATACAGTCAAACAATGTG+TGG | - | chr4.3:88971241-88971260 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | - | chr4.3:88972143-88972162 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | + | chr4.3:88972143-88972162 | MS.gene34302:intron | 30.0% | |
| ACTGGTAAGAGATAATCAAA+AGG | + | chr4.3:88971693-88971712 | MS.gene34302:intron | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | - | chr4.3:88972142-88972161 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | - | chr4.3:88973276-88973295 | None:intergenic | 30.0% | |
| ATCAAGAATAGTCCCTTATT+AGG | + | chr4.3:88973434-88973453 | MS.gene34302:intron | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | - | chr4.3:88974129-88974148 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | - | chr4.3:88972111-88972130 | None:intergenic | 30.0% | |
| ATGCAACTTATAAATGGTAG+AGG | - | chr4.3:88972534-88972553 | None:intergenic | 30.0% | |
| ATGTTTGATATTCCTATGGA+TGG | + | chr4.3:88970417-88970436 | MS.gene34302:CDS | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | + | chr4.3:88972551-88972570 | MS.gene34302:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | - | chr4.3:88971839-88971858 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | + | chr4.3:88971964-88971983 | MS.gene34302:intron | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | - | chr4.3:88971967-88971986 | None:intergenic | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | + | chr4.3:88971694-88971713 | MS.gene34302:intron | 30.0% | |
| CTTGTATGAATATAGAGGAT+GGG | + | chr4.3:88971465-88971484 | MS.gene34302:CDS | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | + | chr4.3:88973884-88973903 | MS.gene34302:CDS | 30.0% | |
| GTTTCTTTCAATCTACAGTA+AGG | - | chr4.3:88972596-88972615 | None:intergenic | 30.0% | |
| TAAAGGCTAGATAGAAACTA+GGG | - | chr4.3:88973275-88973294 | None:intergenic | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | + | chr4.3:88971967-88971986 | MS.gene34302:intron | 30.0% | |
| TACTACAACAATAAGGAGTA+TGG | - | chr4.3:88970991-88971010 | None:intergenic | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | - | chr4.3:88972572-88972591 | None:intergenic | 30.0% | |
| TCTATATTCATACAAGCTAG+TGG | - | chr4.3:88971461-88971480 | None:intergenic | 30.0% | |
| TCTTACAAACCAACTTTGTA+GGG | - | chr4.3:88972110-88972129 | None:intergenic | 30.0% | |
| TGCAATTTGCATTCTGATAT+AGG | - | chr4.3:88973595-88973614 | None:intergenic | 30.0% | |
| TGTCGAGTTCAAATAAAACT+TGG | - | chr4.3:88971588-88971607 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | + | chr4.3:88972820-88972839 | MS.gene34302:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | - | chr4.3:88971428-88971447 | None:intergenic | 30.0% |
| ! | ACTAGCTTGTATGAATATAG+AGG | + | chr4.3:88971460-88971479 | MS.gene34302:CDS | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | + | chr4.3:88973376-88973395 | MS.gene34302:intron | 30.0% |
| ! | ATGGACAATGTATCTAGAAT+AGG | + | chr4.3:88972034-88972053 | MS.gene34302:intron | 30.0% |
| ! | ATTTGATTTCATTGACCCTA+AGG | - | chr4.3:88970802-88970821 | None:intergenic | 30.0% |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | + | chr4.3:88973375-88973394 | MS.gene34302:intron | 30.0% |
| ! | GTATTTTTCTCATTCATCCA+TGG | + | chr4.3:88971255-88971274 | MS.gene34302:intron | 30.0% |
| ! | GTGATTCTCATTTTCGTTAT+GGG | + | chr4.3:88970924-88970943 | MS.gene34302:CDS | 30.0% |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | + | chr4.3:88971004-88971023 | MS.gene34302:CDS | 30.0% |
| ! | TGTGATTCTCATTTTCGTTA+TGG | + | chr4.3:88970923-88970942 | MS.gene34302:CDS | 30.0% |
| ! | TTCATTTTGTGCCAGAAAAT+TGG | - | chr4.3:88972649-88972668 | None:intergenic | 30.0% |
| !! | TCTTCTTTAGGGCTAATAAT+TGG | - | chr4.3:88972447-88972466 | None:intergenic | 30.0% |
| !! | TGTAATTTGCTTATGTGAAC+TGG | + | chr4.3:88971675-88971694 | MS.gene34302:intron | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | + | chr4.3:88972849-88972868 | MS.gene34302:intron | 30.0% |
| AACTTTCATCGAAGATGAGA+TGG | + | chr4.3:88972940-88972959 | MS.gene34302:intron | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | - | chr4.3:88970912-88970931 | None:intergenic | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | - | chr4.3:88972073-88972092 | None:intergenic | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | + | chr4.3:88972386-88972405 | MS.gene34302:intron | 35.0% | |
| ATATCTTCACTATGTCGTAG+TGG | - | chr4.3:88972339-88972358 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | + | chr4.3:88970390-88970409 | MS.gene34302:CDS | 35.0% | |
| ATTGTTGGAGTCCTTTCTTT+CGG | - | chr4.3:88970336-88970355 | None:intergenic | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | - | chr4.3:88972821-88972840 | None:intergenic | 35.0% | |
| CATATAAGCATCTTCTAACG+CGG | + | chr4.3:88972701-88972720 | MS.gene34302:intron | 35.0% | |
| CCACTTTATGAACTAATCCA+TGG | - | chr4.3:88971275-88971294 | None:intergenic | 35.0% | |
| CGGATTGACATCAATTACAA+CGG | - | chr4.3:88973797-88973816 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | + | chr4.3:88973883-88973902 | MS.gene34302:CDS | 35.0% | |
| CGTTGTAATTGATGTCAATC+CGG | + | chr4.3:88973795-88973814 | MS.gene34302:CDS | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | - | chr4.3:88970726-88970745 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | - | chr4.3:88972147-88972166 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | + | chr4.3:88971464-88971483 | MS.gene34302:CDS | 35.0% | |
| GGTTCCAAATCTAGAAAATC+TGG | + | chr4.3:88970438-88970457 | MS.gene34302:CDS | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | + | chr4.3:88973994-88974013 | MS.gene34302:CDS | 35.0% | |
| GTGGATGTATATACACATCT+TGG | - | chr4.3:88971442-88971461 | None:intergenic | 35.0% | |
| TATCTTCACTATGTCGTAGT+GGG | - | chr4.3:88972338-88972357 | None:intergenic | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | + | chr4.3:88970391-88970410 | MS.gene34302:CDS | 35.0% | |
| TCAATGAAAAGGACAAACTC+AGG | + | chr4.3:88970603-88970622 | MS.gene34302:CDS | 35.0% | |
| TCATCTTCGATGAAAGTTCT+TGG | - | chr4.3:88972938-88972957 | None:intergenic | 35.0% | |
| TCCAACACTTTCATTGTTGT+TGG | - | chr4.3:88972211-88972230 | None:intergenic | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | + | chr4.3:88973954-88973973 | MS.gene34302:intron | 35.0% | |
| TGACATAGCAAACATCAGAA+TGG | + | chr4.3:88972382-88972401 | MS.gene34302:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | - | chr4.3:88973870-88973889 | None:intergenic | 35.0% | |
| TGGATGATGAATATTCCTTC+AGG | + | chr4.3:88970871-88970890 | MS.gene34302:CDS | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | + | chr4.3:88973681-88973700 | MS.gene34302:intron | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | + | chr4.3:88971830-88971849 | MS.gene34302:intron | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | + | chr4.3:88972819-88972838 | MS.gene34302:intron | 35.0% |
| ! | CCAACACTTTCATTGTTGTT+GGG | - | chr4.3:88972210-88972229 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | + | chr4.3:88973377-88973396 | MS.gene34302:intron | 35.0% |
| ! | GAAGGCATACTACCTAATAA+GGG | - | chr4.3:88973449-88973468 | None:intergenic | 35.0% |
| ! | TACACGTTCAACCAATTTTC+TGG | + | chr4.3:88972635-88972654 | MS.gene34302:intron | 35.0% |
| ! | TGAAGGCATACTACCTAATA+AGG | - | chr4.3:88973450-88973469 | None:intergenic | 35.0% |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | - | chr4.3:88973069-88973088 | None:intergenic | 35.0% |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | - | chr4.3:88970604-88970623 | None:intergenic | 35.0% |
| ! | TGGACCAGATTTTCTAGATT+TGG | - | chr4.3:88970445-88970464 | None:intergenic | 35.0% |
| ! | TGGGTTACTTAAGCTTTAGT+GGG | + | chr4.3:88972893-88972912 | MS.gene34302:intron | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | + | chr4.3:88972862-88972881 | MS.gene34302:intron | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | + | chr4.3:88973378-88973397 | MS.gene34302:intron | 35.0% |
| ! | TTGGGTTACTTAAGCTTTAG+TGG | + | chr4.3:88972892-88972911 | MS.gene34302:intron | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | + | chr4.3:88973389-88973408 | MS.gene34302:intron | 35.0% |
| !! | AACAACAATGAAAGTGTTGG+AGG | + | chr4.3:88972210-88972229 | MS.gene34302:intron | 35.0% |
| !! | ACAACTGGTTTGATTACATC+TGG | + | chr4.3:88970726-88970745 | MS.gene34302:CDS | 35.0% |
| !! | ATTGCATATTTTGGGGACTT+TGG | + | chr4.3:88973609-88973628 | MS.gene34302:intron | 35.0% |
| !! | CCATGGATTAGTTCATAAAG+TGG | + | chr4.3:88971272-88971291 | MS.gene34302:intron | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | - | chr4.3:88971425-88971444 | None:intergenic | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | - | chr4.3:88972376-88972395 | None:intergenic | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | - | chr4.3:88971415-88971434 | None:intergenic | 35.0% |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | + | chr4.3:88970951-88970970 | MS.gene34302:CDS | 35.0% |
| AAACAATGTGTGGCAAGTGT+TGG | - | chr4.3:88971231-88971250 | None:intergenic | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | - | chr4.3:88970717-88970736 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | - | chr4.3:88972523-88972542 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | + | chr4.3:88970296-88970315 | MS.gene34302:CDS | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | - | chr4.3:88972522-88972541 | None:intergenic | 40.0% | |
| ACAACGGAATCGTCAACATA+AGG | - | chr4.3:88973781-88973800 | None:intergenic | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | + | chr4.3:88971127-88971146 | MS.gene34302:CDS | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | + | chr4.3:88970898-88970917 | MS.gene34302:CDS | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | - | chr4.3:88972029-88972048 | None:intergenic | 40.0% | |
| ATGAAACAAGGGGGGATATT+TGG | + | chr4.3:88972873-88972892 | MS.gene34302:intron | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | - | chr4.3:88970792-88970811 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | - | chr4.3:88972100-88972119 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | + | chr4.3:88971118-88971137 | MS.gene34302:CDS | 40.0% | |
| CATTAAACAACGCTCCTTCA+AGG | + | chr4.3:88970463-88970482 | MS.gene34302:CDS | 40.0% | |
| CATTGCTTAGCTGATGAGAT+GGG | - | chr4.3:88970284-88970303 | None:intergenic | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | - | chr4.3:88973137-88973156 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | + | chr4.3:88972098-88972117 | MS.gene34302:intron | 40.0% | |
| CTACTTCAGCCTCAATGAAA+AGG | + | chr4.3:88970592-88970611 | MS.gene34302:CDS | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | + | chr4.3:88972156-88972175 | MS.gene34302:intron | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | - | chr4.3:88971120-88971139 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | - | chr4.3:88974099-88974118 | None:intergenic | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | + | chr4.3:88971126-88971145 | MS.gene34302:CDS | 40.0% | |
| GATGATGTTATGGTGCAACA+AGG | - | chr4.3:88973203-88973222 | None:intergenic | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | - | chr4.3:88971215-88971234 | None:intergenic | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | - | chr4.3:88971980-88971999 | None:intergenic | 40.0% | |
| TACATCTCTGACTTCCAATC+TGG | + | chr4.3:88973712-88973731 | MS.gene34302:CDS | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | + | chr4.3:88970621-88970640 | MS.gene34302:CDS | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | + | chr4.3:88972874-88972893 | MS.gene34302:intron | 40.0% | |
| TGCCATAACATCAGACATGA+AGG | - | chr4.3:88973467-88973486 | None:intergenic | 40.0% | |
| TGCCTTCATGTCTGATGTTA+TGG | + | chr4.3:88973462-88973481 | MS.gene34302:intron | 40.0% | |
| TGCGACTGCTTGAAATACTT+TGG | + | chr4.3:88971614-88971633 | MS.gene34302:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | + | chr4.3:88971620-88971639 | MS.gene34302:intron | 40.0% | |
| TTCACTTGGAATAGTTGTCG+TGG | + | chr4.3:88971038-88971057 | MS.gene34302:CDS | 40.0% | |
| TTCGTTATGGGATTCATTGC+TGG | + | chr4.3:88970936-88970955 | MS.gene34302:CDS | 40.0% | |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | + | chr4.3:88971007-88971026 | MS.gene34302:CDS | 40.0% |
| ! | CAATAAGGAGTATGGCATTG+CGG | - | chr4.3:88970983-88971002 | None:intergenic | 40.0% |
| ! | CCATCATAGTCATCGACTAT+TGG | + | chr4.3:88973134-88973153 | MS.gene34302:intron | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | + | chr4.3:88972207-88972226 | MS.gene34302:intron | 40.0% |
| ! | CTAGATTTGGAACCATCCAT+AGG | - | chr4.3:88970432-88970451 | None:intergenic | 40.0% |
| ! | GGGTTACTTAAGCTTTAGTG+GGG | + | chr4.3:88972894-88972913 | MS.gene34302:intron | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | + | chr4.3:88972863-88972882 | MS.gene34302:intron | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | + | chr4.3:88972861-88972880 | MS.gene34302:intron | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | + | chr4.3:88973750-88973769 | MS.gene34302:CDS | 40.0% |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | + | chr4.3:88972839-88972858 | MS.gene34302:intron | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | + | chr4.3:88972864-88972883 | MS.gene34302:intron | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | + | chr4.3:88973749-88973768 | MS.gene34302:CDS | 40.0% |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | - | chr4.3:88972203-88972222 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | - | chr4.3:88970906-88970925 | None:intergenic | 40.0% |
| !! | CAGACCACAATATTGGCTTT+GGG | - | chr4.3:88970905-88970924 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | + | chr4.3:88973736-88973755 | MS.gene34302:CDS | 40.0% |
| !! | CTTGAAGGAGCGTTGTTTAA+TGG | - | chr4.3:88970465-88970484 | None:intergenic | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | + | chr4.3:88973742-88973761 | MS.gene34302:CDS | 40.0% |
| !! | TAAACATCGCCGTTTTACCT+GGG | + | chr4.3:88971507-88971526 | MS.gene34302:CDS | 40.0% |
| !!! | ATTTTTCCAGCTAGCCTTGA+AGG | + | chr4.3:88974112-88974131 | MS.gene34302:CDS | 40.0% |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | - | chr4.3:88973738-88973757 | None:intergenic | 40.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | - | chr4.3:88971519-88971538 | None:intergenic | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | + | chr4.3:88971090-88971109 | MS.gene34302:CDS | 45.0% | |
| AATGGACCAGAAACCTTCCT+TGG | - | chr4.3:88970774-88970793 | None:intergenic | 45.0% | |
| ACAATACCTTCAAGGCTAGC+TGG | - | chr4.3:88974121-88974140 | None:intergenic | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | + | chr4.3:88970297-88970316 | MS.gene34302:CDS | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | + | chr4.3:88970623-88970642 | MS.gene34302:CDS | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | - | chr4.3:88970351-88970370 | None:intergenic | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | + | chr4.3:88970622-88970641 | MS.gene34302:CDS | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | + | chr4.3:88970282-88970301 | MS.gene34302:CDS | 45.0% | |
| CCATTGCTTAGCTGATGAGA+TGG | - | chr4.3:88970285-88970304 | None:intergenic | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | + | chr4.3:88971056-88971075 | MS.gene34302:CDS | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | + | chr4.3:88970784-88970803 | MS.gene34302:CDS | 45.0% | |
| CTTGGAATAGTTGTCGTGGA+AGG | + | chr4.3:88971042-88971061 | MS.gene34302:CDS | 45.0% | |
| GCCATATCTCTAGGCAATGT+GGG | + | chr4.3:88972165-88972184 | MS.gene34302:intron | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | + | chr4.3:88971125-88971144 | MS.gene34302:CDS | 45.0% | |
| GGGGACATGTCTTTATTCTC+CGG | - | chr4.3:88973817-88973836 | None:intergenic | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | - | chr4.3:88970630-88970649 | None:intergenic | 45.0% | |
| GTTATGGGATTCATTGCTGG+AGG | + | chr4.3:88970939-88970958 | MS.gene34302:CDS | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | + | chr4.3:88970629-88970648 | MS.gene34302:CDS | 45.0% | |
| TCAGGTAATCTATCTGCTGC+AGG | + | chr4.3:88970564-88970583 | MS.gene34302:CDS | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | + | chr4.3:88970360-88970379 | MS.gene34302:CDS | 45.0% | |
| TCATCGAAGATGAGATGGAG+TGG | + | chr4.3:88972945-88972964 | MS.gene34302:intron | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | - | chr4.3:88972169-88972188 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | + | chr4.3:88970783-88970802 | MS.gene34302:CDS | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | + | chr4.3:88973392-88973411 | MS.gene34302:intron | 45.0% | |
| TTAGCTGATCCCACTTGTGT+TGG | - | chr4.3:88972832-88972851 | None:intergenic | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | - | chr4.3:88970323-88970342 | None:intergenic | 45.0% | |
| ! | AACTAGGAGTGTGAGACAGA+TGG | + | chr4.3:88972742-88972761 | MS.gene34302:intron | 45.0% |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | + | chr4.3:88971010-88971029 | MS.gene34302:CDS | 45.0% |
| ! | ACTAGGAGTGTGAGACAGAT+GGG | + | chr4.3:88972743-88972762 | MS.gene34302:intron | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | - | chr4.3:88972204-88972223 | None:intergenic | 45.0% |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | - | chr4.3:88970889-88970908 | None:intergenic | 45.0% |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | - | chr4.3:88970525-88970544 | None:intergenic | 45.0% |
| ! | GTAAAGGCATGAAACAAGGG+GGG | + | chr4.3:88972865-88972884 | MS.gene34302:intron | 45.0% |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | - | chr4.3:88970708-88970727 | None:intergenic | 45.0% |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | - | chr4.3:88972202-88972221 | None:intergenic | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | + | chr4.3:88971508-88971527 | MS.gene34302:CDS | 45.0% |
| !! | CATATTTTGGGGACTTTGGC+AGG | + | chr4.3:88973613-88973632 | MS.gene34302:intron | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | + | chr4.3:88971506-88971525 | MS.gene34302:CDS | 45.0% |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | + | chr4.3:88971382-88971401 | MS.gene34302:intron | 45.0% |
| !! | GGCGGCTATGATGTTTTTGT+AGG | + | chr4.3:88973972-88973991 | MS.gene34302:intron | 45.0% |
| AACAACGCTCCTTCAAGGAC+TGG | + | chr4.3:88970468-88970487 | MS.gene34302:CDS | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | + | chr4.3:88970657-88970676 | MS.gene34302:CDS | 50.0% | |
| ACACTGAGAGTAGTCACAGC+TGG | - | chr4.3:88970852-88970871 | None:intergenic | 50.0% | |
| AGACAGATGGGAGAGTCATC+TGG | + | chr4.3:88972755-88972774 | MS.gene34302:intron | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | + | chr4.3:88970851-88970870 | MS.gene34302:CDS | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | + | chr4.3:88974006-88974025 | MS.gene34302:CDS | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | + | chr4.3:88972954-88972973 | MS.gene34302:intron | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | - | chr4.3:88973836-88973855 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | - | chr4.3:88973837-88973856 | None:intergenic | 50.0% | |
| CCAGTTGTTGGAAGAACTGG+AGG | - | chr4.3:88970714-88970733 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | - | chr4.3:88973838-88973857 | None:intergenic | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | - | chr4.3:88973839-88973858 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | + | chr4.3:88973835-88973854 | MS.gene34302:CDS | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | + | chr4.3:88973836-88973855 | MS.gene34302:CDS | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | + | chr4.3:88970711-88970730 | MS.gene34302:CDS | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | + | chr4.3:88970546-88970565 | MS.gene34302:CDS | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | - | chr4.3:88971401-88971420 | None:intergenic | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | + | chr4.3:88970645-88970664 | MS.gene34302:CDS | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | + | chr4.3:88972419-88972438 | MS.gene34302:intron | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | - | chr4.3:88970480-88970499 | None:intergenic | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | - | chr4.3:88970651-88970670 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | + | chr4.3:88972164-88972183 | MS.gene34302:intron | 50.0% | |
| GGTAGCACGGTTAGCGTAAT+GGG | + | chr4.3:88974007-88974026 | MS.gene34302:CDS | 50.0% | |
| GTCCTGAACAGCCGAAAGAA+AGG | + | chr4.3:88970322-88970341 | MS.gene34302:CDS | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | - | chr4.3:88970327-88970346 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | + | chr4.3:88970480-88970499 | MS.gene34302:CDS | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | - | chr4.3:88970382-88970401 | None:intergenic | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | + | chr4.3:88972955-88972974 | MS.gene34302:intron | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | - | chr4.3:88973846-88973865 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | - | chr4.3:88970375-88970394 | None:intergenic | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | + | chr4.3:88972405-88972424 | MS.gene34302:intron | 50.0% | |
| ! | AAGCTTTAGTGGGGTCAGAC+TGG | + | chr4.3:88972903-88972922 | MS.gene34302:intron | 50.0% |
| ! | TCATTGTTGTTGGGTGCAGG+GGG | - | chr4.3:88972201-88972220 | None:intergenic | 50.0% |
| ! | TGAATTCATCTGGGGCTCCA+AGG | + | chr4.3:88970754-88970773 | MS.gene34302:CDS | 50.0% |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | - | chr4.3:88970695-88970714 | None:intergenic | 50.0% |
| ACATTTCGCCCACTGGCATC+CGG | - | chr4.3:88974092-88974111 | None:intergenic | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | - | chr4.3:88970664-88970683 | None:intergenic | 55.0% | |
| CAACGAAGGCAGCTCAAGTG+TGG | + | chr4.3:88972236-88972255 | MS.gene34302:intron | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | - | chr4.3:88973729-88973748 | None:intergenic | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | + | chr4.3:88973834-88973853 | MS.gene34302:CDS | 55.0% | |
| CCCTCATGACCAAACCCGAT+GGG | + | chr4.3:88972003-88972022 | MS.gene34302:intron | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | - | chr4.3:88971527-88971546 | None:intergenic | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | + | chr4.3:88970745-88970764 | MS.gene34302:CDS | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | + | chr4.3:88971525-88971544 | MS.gene34302:CDS | 55.0% | |
| GAGATGGAGTGGTTGCAGAG+GGG | + | chr4.3:88972956-88972975 | MS.gene34302:intron | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | - | chr4.3:88970752-88970771 | None:intergenic | 55.0% | |
| GAGCTGAGGACAGCCAAGAA+TGG | + | chr4.3:88971104-88971123 | MS.gene34302:CDS | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | + | chr4.3:88970530-88970549 | MS.gene34302:CDS | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | - | chr4.3:88970753-88970772 | None:intergenic | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | + | chr4.3:88970381-88970400 | MS.gene34302:CDS | 55.0% | |
| GTTGCCATGCCTTATACCGG+CGG | + | chr4.3:88970363-88970382 | MS.gene34302:CDS | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | + | chr4.3:88970660-88970679 | MS.gene34302:CDS | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | + | chr4.3:88970744-88970763 | MS.gene34302:CDS | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | + | chr4.3:88970663-88970682 | MS.gene34302:CDS | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | + | chr4.3:88970746-88970765 | MS.gene34302:CDS | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | + | chr4.3:88970680-88970699 | MS.gene34302:CDS | 55.0% | |
| TGTCCCCCGATTTCCTTCGA+TGG | + | chr4.3:88973830-88973849 | MS.gene34302:CDS | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | + | chr4.3:88974081-88974100 | MS.gene34302:CDS | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | + | chr4.3:88972222-88972241 | MS.gene34302:intron | 55.0% |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | - | chr4.3:88972003-88972022 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | - | chr4.3:88972004-88972023 | None:intergenic | 55.0% |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | + | chr4.3:88973726-88973745 | MS.gene34302:CDS | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | - | chr4.3:88972005-88972024 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | - | chr4.3:88972006-88972025 | None:intergenic | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | + | chr4.3:88971024-88971043 | MS.gene34302:CDS | 55.0% |
| ! | GGCACCAGATTCGAGTTTCC+TGG | - | chr4.3:88972426-88972445 | None:intergenic | 55.0% |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | + | chr4.3:88970758-88970777 | MS.gene34302:CDS | 55.0% |
| CACTGGCATCCGGTCGTCAA+AGG | - | chr4.3:88974082-88974101 | None:intergenic | 60.0% | |
| CAGGACGGCCCGATACATAC+AGG | - | chr4.3:88970308-88970327 | None:intergenic | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | - | chr4.3:88974076-88974095 | None:intergenic | 60.0% | |
| CATGACCAAACCCGATGGGC+CGG | + | chr4.3:88972007-88972026 | MS.gene34302:intron | 60.0% | |
| CCCCTCATGACCAAACCCGA+TGG | + | chr4.3:88972002-88972021 | MS.gene34302:intron | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | + | chr4.3:88974070-88974089 | MS.gene34302:CDS | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | - | chr4.3:88970672-88970691 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | + | chr4.3:88974080-88974099 | MS.gene34302:CDS | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | - | chr4.3:88971098-88971117 | None:intergenic | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | + | chr4.3:88970765-88970784 | MS.gene34302:CDS | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | + | chr4.3:88970681-88970700 | MS.gene34302:CDS | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | - | chr4.3:88970370-88970389 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | - | chr4.3:88974070-88974089 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | - | chr4.3:88971998-88972017 | None:intergenic | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | - | chr4.3:88972021-88972040 | None:intergenic | 60.0% | |
| TGTTGTTGGGTGCAGGGGGT+GGG | - | chr4.3:88972197-88972216 | None:intergenic | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | - | chr4.3:88972007-88972026 | None:intergenic | 60.0% |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | - | chr4.3:88972002-88972021 | None:intergenic | 60.0% |
| ! | TTGTTGTTGGGTGCAGGGGG+TGG | - | chr4.3:88972198-88972217 | None:intergenic | 60.0% |
| !! | AGTGGGGTCAGACTGGTCTC+AGG | + | chr4.3:88972910-88972929 | MS.gene34302:intron | 60.0% |
| AACCCGATGGGCCGGAAGCA+TGG | + | chr4.3:88972015-88972034 | MS.gene34302:intron | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | - | chr4.3:88974073-88974092 | None:intergenic | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | - | chr4.3:88972020-88972039 | None:intergenic | 65.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | - | chr4.3:88972015-88972034 | None:intergenic | 65.0% | |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | + | chr4.3:88970498-88970517 | MS.gene34302:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 88970267 | 88974186 | 88970267 | ID=MS.gene34302 |
| chr4.3 | mRNA | 88970267 | 88974186 | 88970267 | ID=MS.gene34302.t1;Parent=MS.gene34302 |
| chr4.3 | exon | 88970267 | 88971148 | 88970267 | ID=MS.gene34302.t1.exon1;Parent=MS.gene34302.t1 |
| chr4.3 | CDS | 88970267 | 88971148 | 88970267 | ID=cds.MS.gene34302.t1;Parent=MS.gene34302.t1 |
| chr4.3 | exon | 88971391 | 88971546 | 88971391 | ID=MS.gene34302.t1.exon2;Parent=MS.gene34302.t1 |
| chr4.3 | CDS | 88971391 | 88971546 | 88971391 | ID=cds.MS.gene34302.t1;Parent=MS.gene34302.t1 |
| chr4.3 | exon | 88973694 | 88973905 | 88973694 | ID=MS.gene34302.t1.exon3;Parent=MS.gene34302.t1 |
| chr4.3 | CDS | 88973694 | 88973905 | 88973694 | ID=cds.MS.gene34302.t1;Parent=MS.gene34302.t1 |
| chr4.3 | exon | 88973994 | 88974186 | 88973994 | ID=MS.gene34302.t1.exon4;Parent=MS.gene34302.t1 |
| chr4.3 | CDS | 88973994 | 88974186 | 88973994 | ID=cds.MS.gene34302.t1;Parent=MS.gene34302.t1 |
| Gene Sequence |
| Protein sequence |
