Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053283.t1 | XP_013454502.1 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 3.10E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053283.t1 | Q9FZ45 | 71.2 | 483 | 127 | 3 | 1 | 480 | 1 | 474 | 2.4e-177 | 623.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053283.t1 | A0A072UHD8 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 2.2e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053281 | MS.gene053283 | 0.916184 | 2.42E-85 | -1.69E-46 |
| MS.gene053283 | MS.gene05652 | 0.8069 | 6.57E-50 | -1.69E-46 |
| MS.gene053283 | MS.gene070324 | 0.825366 | 4.87E-54 | -1.69E-46 |
| MS.gene053283 | MS.gene25932 | 0.81449 | 1.50E-51 | -1.69E-46 |
| MS.gene053283 | MS.gene34302 | 0.995851 | 1.37E-220 | -1.69E-46 |
| MS.gene053283 | MS.gene34348 | 0.91796 | 2.80E-86 | -1.69E-46 |
| MS.gene053283 | MS.gene34350 | 0.90298 | 5.56E-79 | -1.69E-46 |
| MS.gene053283 | MS.gene34503 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene053283 | MS.gene34573 | 0.820946 | 5.24E-53 | -1.69E-46 |
| MS.gene053283 | MS.gene46636 | 0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene053283 | MS.gene48447 | 0.801661 | 8.11E-49 | -1.69E-46 |
| MS.gene053283 | MS.gene57734 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene053283 | MS.gene58738 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene053283 | MS.gene61081 | 0.826633 | 2.44E-54 | -1.69E-46 |
| MS.gene053283 | MS.gene61745 | 0.823896 | 1.08E-53 | -1.69E-46 |
| MS.gene053283 | MS.gene64007 | 0.830069 | 3.61E-55 | -1.69E-46 |
| MS.gene053283 | MS.gene70604 | 0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene053283 | MS.gene72164 | 0.814008 | 1.92E-51 | -1.69E-46 |
| MS.gene053283 | MS.gene88464 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene053283 | MS.gene91133 | 0.821533 | 3.84E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053283.t1 | MTR_4g005510 | 99.167 | 480 | 2 | 1 | 1 | 480 | 1 | 478 | 0.0 | 969 |
| MS.gene053283.t1 | MTR_4g007930 | 79.098 | 488 | 93 | 3 | 1 | 480 | 1 | 487 | 0.0 | 785 |
| MS.gene053283.t1 | MTR_4g007930 | 70.697 | 488 | 83 | 4 | 1 | 480 | 1 | 436 | 0.0 | 678 |
| MS.gene053283.t1 | MTR_2g025190 | 48.866 | 485 | 186 | 10 | 1 | 480 | 1 | 428 | 6.09e-150 | 434 |
| MS.gene053283.t1 | MTR_4g094505 | 98.148 | 108 | 2 | 0 | 345 | 452 | 36 | 143 | 6.64e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053283.t1 | AT1G16860 | 74.433 | 485 | 108 | 6 | 1 | 480 | 1 | 474 | 0.0 | 717 |
| MS.gene053283.t1 | AT1G78880 | 74.433 | 485 | 102 | 7 | 1 | 480 | 1 | 468 | 0.0 | 716 |
| MS.gene053283.t1 | AT4G22290 | 49.170 | 482 | 206 | 8 | 1 | 480 | 1 | 445 | 2.39e-148 | 431 |
Find 139 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 4.3:+88932530 | MS.gene053283:CDS |
| CTTGAAGGAGCGTTGTTTAA+TGG | 0.228567 | 4.3:-88931867 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 4.3:+88931795 | MS.gene053283:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 4.3:-88931729 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 4.3:+88935240 | MS.gene053283:CDS |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 4.3:-88932522 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 4.3:+88932170 | MS.gene053283:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 4.3:-88931777 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 4.3:+88931885 | MS.gene053283:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 4.3:+88932149 | MS.gene053283:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 4.3:+88935117 | MS.gene053283:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 4.3:+88931843 | MS.gene053283:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 4.3:+88935239 | MS.gene053283:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 4.3:-88932119 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 4.3:-88935241 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.377574 | 4.3:+88932341 | MS.gene053283:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 4.3:-88932308 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 4.3:-88932097 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 4.3:+88935141 | MS.gene053283:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 4.3:-88932110 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 4.3:+88932188 | MS.gene053283:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 4.3:-88932194 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 4.3:-88935240 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 4.3:-88932393 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 4.3:+88935147 | MS.gene053283:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 4.3:+88935412 | MS.gene053283:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 4.3:-88932314 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 4.3:-88931738 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 4.3:+88932116 | MS.gene053283:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 4.3:+88932531 | MS.gene053283:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 4.3:-88932128 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 4.3:-88935531 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 4.3:+88932034 | MS.gene053283:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 4.3:+88931935 | MS.gene053283:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 4.3:-88932400 | None:intergenic |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 4.3:-88935131 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 4.3:+88932131 | MS.gene053283:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 4.3:-88932500 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 4.3:+88932429 | MS.gene053283:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 4.3:-88932053 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 4.3:+88932276 | MS.gene053283:CDS |
| ACAATACCTTCAAGGCTAGC+TGG | 0.445053 | 4.3:-88935523 | None:intergenic |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 4.3:+88932189 | MS.gene053283:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 4.3:+88932062 | MS.gene053283:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 4.3:+88935241 | MS.gene053283:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 4.3:-88932307 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 4.3:+88931903 | MS.gene053283:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 4.3:+88931796 | MS.gene053283:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 4.3:+88935288 | MS.gene053283:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 4.3:+88935475 | MS.gene053283:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 4.3:-88932921 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 4.3:-88931882 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 4.3:-88935478 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 4.3:+88932150 | MS.gene053283:CDS |
| GGGGACATGTCTTTATTCTC+CGG | 0.465892 | 4.3:-88935219 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 4.3:+88932461 | MS.gene053283:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 4.3:+88932085 | MS.gene053283:CDS |
| CATTAAACAACGCTCCTTCA+AGG | 0.481983 | 4.3:+88931868 | MS.gene053283:CDS |
| CGTTGTAATTGATGTCAATC+CGG | 0.482923 | 4.3:+88935200 | MS.gene053283:CDS |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 4.3:+88931951 | MS.gene053283:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 4.3:+88932865 | MS.gene053283:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 4.3:-88932204 | None:intergenic |
| ATGTTTGATATTCCTATGGA+TGG | 0.490543 | 4.3:+88931822 | MS.gene053283:CDS |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 4.3:+88935411 | MS.gene053283:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 4.3:-88935484 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 4.3:-88935494 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 4.3:-88932176 | None:intergenic |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 4.3:-88935472 | None:intergenic |
| GAAAATGTTTGATATTCCTA+TGG | 0.498329 | 4.3:+88931818 | MS.gene053283:CDS |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 4.3:+88931997 | MS.gene053283:CDS |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 4.3:-88935183 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 4.3:-88931753 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 4.3:+88931786 | MS.gene053283:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 4.3:-88932844 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 4.3:+88935131 | MS.gene053283:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 4.3:-88932291 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 4.3:+88931969 | MS.gene053283:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 4.3:+88931727 | MS.gene053283:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 4.3:+88932068 | MS.gene053283:CDS |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 4.3:+88932509 | MS.gene053283:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 4.3:+88931702 | MS.gene053283:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 4.3:+88931765 | MS.gene053283:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 4.3:+88932050 | MS.gene053283:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 4.3:+88935155 | MS.gene053283:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 4.3:-88931687 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 4.3:+88935154 | MS.gene053283:CDS |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 4.3:+88931701 | MS.gene053283:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 4.3:+88932163 | MS.gene053283:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 4.3:-88932154 | None:intergenic |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 4.3:+88932869 | MS.gene053283:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 4.3:-88935248 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.546115 | 4.3:-88931834 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 4.3:+88931661 | None:intergenic |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 4.3:+88932447 | MS.gene053283:CDS |
| AACAACGCTCCTTCAAGGAC+TGG | 0.554039 | 4.3:+88931873 | MS.gene053283:CDS |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 4.3:-88931710 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 4.3:-88932863 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 4.3:-88932929 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 4.3:-88935272 | None:intergenic |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 4.3:+88932159 | MS.gene053283:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 4.3:+88932065 | MS.gene053283:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 4.3:-88931686 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 4.3:-88932254 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 4.3:+88932523 | MS.gene053283:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 4.3:-88931725 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 4.3:-88935475 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 4.3:+88932870 | MS.gene053283:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 4.3:+88932086 | MS.gene053283:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 4.3:-88932803 | None:intergenic |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 4.3:+88932443 | MS.gene053283:CDS |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 4.3:-88932032 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 4.3:+88935485 | MS.gene053283:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 4.3:-88931784 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 4.3:+88932344 | MS.gene053283:CDS |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 4.3:+88932008 | MS.gene053283:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 4.3:-88931772 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 4.3:-88932155 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 4.3:+88931687 | MS.gene053283:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 4.3:+88935289 | MS.gene053283:CDS |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 4.3:+88935086 | MS.gene053283:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 4.3:+88932027 | MS.gene053283:CDS |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 4.3:-88932116 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 4.3:-88932066 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 4.3:+88932532 | MS.gene053283:CDS |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 4.3:-88935239 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 4.3:+88932026 | MS.gene053283:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 4.3:+88932495 | MS.gene053283:CDS |
| CGGATTGACATCAATTACAA+CGG | 0.656746 | 4.3:-88935199 | None:intergenic |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 4.3:+88932151 | MS.gene053283:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 4.3:+88935399 | MS.gene053283:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 4.3:+88935486 | MS.gene053283:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 4.3:+88931768 | MS.gene053283:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 4.3:+88932930 | MS.gene053283:CDS |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 4.3:+88932303 | MS.gene053283:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 4.3:-88932385 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 4.3:-88932074 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 4.3:+88932256 | MS.gene053283:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 4.3:-88935238 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 4.3:+88932028 | MS.gene053283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTCTTTCAAATAA+AGG | - | chr4.3:88934697-88934716 | None:intergenic | 10.0% |
| !! | AACTTATATACAATGAATTT+GGG | + | chr4.3:88933218-88933237 | MS.gene053283:intron | 15.0% |
| !! | TAACTTATATACAATGAATT+TGG | + | chr4.3:88933217-88933236 | MS.gene053283:intron | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | + | chr4.3:88934626-88934645 | MS.gene053283:intron | 15.0% |
| !!! | ATAATTATTTCTTTCTTGTT+TGG | + | chr4.3:88934572-88934591 | MS.gene053283:intron | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | + | chr4.3:88934418-88934437 | MS.gene053283:intron | 15.0% |
| !!! | TAATTATTTCTTTCTTGTTT+GGG | + | chr4.3:88934573-88934592 | MS.gene053283:intron | 15.0% |
| !! | AAAGAATTACTACAACAATA+AGG | - | chr4.3:88932403-88932422 | None:intergenic | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | - | chr4.3:88933045-88933064 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | - | chr4.3:88934618-88934637 | None:intergenic | 20.0% |
| !! | CAAAAGTTAGAATATATCAA+TGG | - | chr4.3:88932773-88932792 | None:intergenic | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | - | chr4.3:88935079-88935098 | None:intergenic | 20.0% |
| !! | TAGATTATACCATGTAATTA+GGG | - | chr4.3:88933199-88933218 | None:intergenic | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | - | chr4.3:88934485-88934504 | None:intergenic | 20.0% |
| !! | TTAGATTATACCATGTAATT+AGG | - | chr4.3:88933200-88933219 | None:intergenic | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | + | chr4.3:88933321-88933340 | MS.gene053283:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | + | chr4.3:88933322-88933341 | MS.gene053283:intron | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | + | chr4.3:88934428-88934447 | MS.gene053283:intron | 20.0% |
| !!! | TGATATATTCTAACTTTTGA+AGG | + | chr4.3:88932774-88932793 | MS.gene053283:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | - | chr4.3:88933945-88933964 | None:intergenic | 20.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | + | chr4.3:88935356-88935375 | MS.gene053283:intron | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | - | chr4.3:88933888-88933907 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | + | chr4.3:88933187-88933206 | MS.gene053283:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | + | chr4.3:88933288-88933307 | MS.gene053283:intron | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | + | chr4.3:88934131-88934150 | MS.gene053283:intron | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | - | chr4.3:88934134-88934153 | None:intergenic | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | - | chr4.3:88933371-88933390 | None:intergenic | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | + | chr4.3:88933289-88933308 | MS.gene053283:intron | 25.0% |
| ! | GAAAATGTTTGATATTCCTA+TGG | + | chr4.3:88931818-88931837 | MS.gene053283:CDS | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | + | chr4.3:88934964-88934983 | MS.gene053283:intron | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | - | chr4.3:88934946-88934965 | None:intergenic | 25.0% |
| ! | TTCAAATCATGAATGATTGA+TGG | + | chr4.3:88932740-88932759 | MS.gene053283:intron | 25.0% |
| ! | TTTCTTTCAATCTACAGTAA+GGG | - | chr4.3:88934000-88934019 | None:intergenic | 25.0% |
| !! | AATGCAAATTGCATATTTTG+GGG | + | chr4.3:88935007-88935026 | MS.gene053283:intron | 25.0% |
| !! | AGAATGCAAATTGCATATTT+TGG | + | chr4.3:88935005-88935024 | MS.gene053283:intron | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | + | chr4.3:88933472-88933491 | MS.gene053283:intron | 25.0% |
| !! | GAATGCAAATTGCATATTTT+GGG | + | chr4.3:88935006-88935025 | MS.gene053283:intron | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | - | chr4.3:88933134-88933153 | None:intergenic | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | + | chr4.3:88933473-88933492 | MS.gene053283:intron | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | - | chr4.3:88933863-88933882 | None:intergenic | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | + | chr4.3:88934727-88934746 | MS.gene053283:intron | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | - | chr4.3:88933864-88933883 | None:intergenic | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | + | chr4.3:88935391-88935410 | MS.gene053283:intron | 25.0% |
| !!! | TATATTCTAACTTTTGAAGG+TGG | + | chr4.3:88932777-88932796 | MS.gene053283:intron | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | + | chr4.3:88934942-88934961 | MS.gene053283:intron | 25.0% |
| AAATACAGTCAAACAATGTG+TGG | - | chr4.3:88932646-88932665 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | - | chr4.3:88933548-88933567 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | + | chr4.3:88933548-88933567 | MS.gene053283:intron | 30.0% | |
| ACTGGTAAGAGATAATCAAA+AGG | + | chr4.3:88933098-88933117 | MS.gene053283:intron | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | - | chr4.3:88933547-88933566 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | - | chr4.3:88934681-88934700 | None:intergenic | 30.0% | |
| ATCAAGAATAGTCCCTTATT+AGG | + | chr4.3:88934839-88934858 | MS.gene053283:intron | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | - | chr4.3:88935534-88935553 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | - | chr4.3:88933516-88933535 | None:intergenic | 30.0% | |
| ATGCAACTTATAAATGGTAG+AGG | - | chr4.3:88933939-88933958 | None:intergenic | 30.0% | |
| ATGTTTGATATTCCTATGGA+TGG | + | chr4.3:88931822-88931841 | MS.gene053283:CDS | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | + | chr4.3:88933956-88933975 | MS.gene053283:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | - | chr4.3:88933244-88933263 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | + | chr4.3:88933369-88933388 | MS.gene053283:intron | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | - | chr4.3:88933372-88933391 | None:intergenic | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | + | chr4.3:88933099-88933118 | MS.gene053283:intron | 30.0% | |
| CTTGTATGAATATAGAGGAT+GGG | + | chr4.3:88932870-88932889 | MS.gene053283:CDS | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | + | chr4.3:88935289-88935308 | MS.gene053283:CDS | 30.0% | |
| GTTTCTTTCAATCTACAGTA+AGG | - | chr4.3:88934001-88934020 | None:intergenic | 30.0% | |
| TAAAGGCTAGATAGAAACTA+GGG | - | chr4.3:88934680-88934699 | None:intergenic | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | + | chr4.3:88933372-88933391 | MS.gene053283:intron | 30.0% | |
| TACTACAACAATAAGGAGTA+TGG | - | chr4.3:88932396-88932415 | None:intergenic | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | - | chr4.3:88933977-88933996 | None:intergenic | 30.0% | |
| TCTATATTCATACAAGCTAG+TGG | - | chr4.3:88932866-88932885 | None:intergenic | 30.0% | |
| TCTTACAAACCAACTTTGTA+GGG | - | chr4.3:88933515-88933534 | None:intergenic | 30.0% | |
| TGCAATTTGCATTCTGATAT+AGG | - | chr4.3:88935000-88935019 | None:intergenic | 30.0% | |
| TGTCGAGTTCAAATAAAACT+TGG | - | chr4.3:88932993-88933012 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | + | chr4.3:88934225-88934244 | MS.gene053283:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | - | chr4.3:88932833-88932852 | None:intergenic | 30.0% |
| ! | ACTAGCTTGTATGAATATAG+AGG | + | chr4.3:88932865-88932884 | MS.gene053283:CDS | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | + | chr4.3:88934781-88934800 | MS.gene053283:intron | 30.0% |
| ! | ATGGACAATGTATCTAGAAT+AGG | + | chr4.3:88933439-88933458 | MS.gene053283:intron | 30.0% |
| ! | ATTTGATTTCATTGACCCTA+AGG | - | chr4.3:88932207-88932226 | None:intergenic | 30.0% |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | + | chr4.3:88934780-88934799 | MS.gene053283:intron | 30.0% |
| ! | GTATTTTTCTCATTCATCCA+TGG | + | chr4.3:88932660-88932679 | MS.gene053283:intron | 30.0% |
| ! | GTGATTCTCATTTTCGTTAT+GGG | + | chr4.3:88932329-88932348 | MS.gene053283:CDS | 30.0% |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | + | chr4.3:88932409-88932428 | MS.gene053283:CDS | 30.0% |
| ! | TGTGATTCTCATTTTCGTTA+TGG | + | chr4.3:88932328-88932347 | MS.gene053283:CDS | 30.0% |
| ! | TTCATTTTGTGCCAGAAAAT+TGG | - | chr4.3:88934054-88934073 | None:intergenic | 30.0% |
| !! | TCTTCTTTAGGGCTAATAAT+TGG | - | chr4.3:88933852-88933871 | None:intergenic | 30.0% |
| !! | TGTAATTTGCTTATGTGAAC+TGG | + | chr4.3:88933080-88933099 | MS.gene053283:intron | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | + | chr4.3:88934254-88934273 | MS.gene053283:intron | 30.0% |
| AACTTTCATCGAAGATGAGA+TGG | + | chr4.3:88934345-88934364 | MS.gene053283:intron | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | - | chr4.3:88932317-88932336 | None:intergenic | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | - | chr4.3:88933478-88933497 | None:intergenic | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | + | chr4.3:88933791-88933810 | MS.gene053283:intron | 35.0% | |
| ATATCTTCACTATGTCGTAG+TGG | - | chr4.3:88933744-88933763 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | + | chr4.3:88931795-88931814 | MS.gene053283:CDS | 35.0% | |
| ATTGTTGGAGTCCTTTCTTT+CGG | - | chr4.3:88931741-88931760 | None:intergenic | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | - | chr4.3:88934226-88934245 | None:intergenic | 35.0% | |
| CATATAAGCATCTTCTAACG+CGG | + | chr4.3:88934106-88934125 | MS.gene053283:intron | 35.0% | |
| CCACTTTATGAACTAATCCA+TGG | - | chr4.3:88932680-88932699 | None:intergenic | 35.0% | |
| CGGATTGACATCAATTACAA+CGG | - | chr4.3:88935202-88935221 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | + | chr4.3:88935288-88935307 | MS.gene053283:CDS | 35.0% | |
| CGTTGTAATTGATGTCAATC+CGG | + | chr4.3:88935200-88935219 | MS.gene053283:CDS | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | - | chr4.3:88932131-88932150 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | - | chr4.3:88933552-88933571 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | + | chr4.3:88932869-88932888 | MS.gene053283:CDS | 35.0% | |
| GGTTCCAAATCTAGAAAATC+TGG | + | chr4.3:88931843-88931862 | MS.gene053283:CDS | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | + | chr4.3:88935399-88935418 | MS.gene053283:CDS | 35.0% | |
| GTGGATGTATATACACATCT+TGG | - | chr4.3:88932847-88932866 | None:intergenic | 35.0% | |
| TATCTTCACTATGTCGTAGT+GGG | - | chr4.3:88933743-88933762 | None:intergenic | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | + | chr4.3:88931796-88931815 | MS.gene053283:CDS | 35.0% | |
| TCAATGAAAAGGACAAACTC+AGG | + | chr4.3:88932008-88932027 | MS.gene053283:CDS | 35.0% | |
| TCATCTTCGATGAAAGTTCT+TGG | - | chr4.3:88934343-88934362 | None:intergenic | 35.0% | |
| TCCAACACTTTCATTGTTGT+TGG | - | chr4.3:88933616-88933635 | None:intergenic | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | + | chr4.3:88935359-88935378 | MS.gene053283:intron | 35.0% | |
| TGACATAGCAAACATCAGAA+TGG | + | chr4.3:88933787-88933806 | MS.gene053283:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | - | chr4.3:88935275-88935294 | None:intergenic | 35.0% | |
| TGGATGATGAATATTCCTTC+AGG | + | chr4.3:88932276-88932295 | MS.gene053283:CDS | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | + | chr4.3:88935086-88935105 | MS.gene053283:intron | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | + | chr4.3:88933235-88933254 | MS.gene053283:intron | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | + | chr4.3:88934224-88934243 | MS.gene053283:intron | 35.0% |
| ! | CCAACACTTTCATTGTTGTT+GGG | - | chr4.3:88933615-88933634 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | + | chr4.3:88934782-88934801 | MS.gene053283:intron | 35.0% |
| ! | GAAGGCATACTACCTAATAA+GGG | - | chr4.3:88934854-88934873 | None:intergenic | 35.0% |
| ! | TACACGTTCAACCAATTTTC+TGG | + | chr4.3:88934040-88934059 | MS.gene053283:intron | 35.0% |
| ! | TGAAGGCATACTACCTAATA+AGG | - | chr4.3:88934855-88934874 | None:intergenic | 35.0% |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | - | chr4.3:88934474-88934493 | None:intergenic | 35.0% |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | - | chr4.3:88932009-88932028 | None:intergenic | 35.0% |
| ! | TGGACCAGATTTTCTAGATT+TGG | - | chr4.3:88931850-88931869 | None:intergenic | 35.0% |
| ! | TGGGTTACTTAAGCTTTAGT+GGG | + | chr4.3:88934298-88934317 | MS.gene053283:intron | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | + | chr4.3:88934267-88934286 | MS.gene053283:intron | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | + | chr4.3:88934783-88934802 | MS.gene053283:intron | 35.0% |
| ! | TTGGGTTACTTAAGCTTTAG+TGG | + | chr4.3:88934297-88934316 | MS.gene053283:intron | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | + | chr4.3:88934794-88934813 | MS.gene053283:intron | 35.0% |
| !! | AACAACAATGAAAGTGTTGG+AGG | + | chr4.3:88933615-88933634 | MS.gene053283:intron | 35.0% |
| !! | ACAACTGGTTTGATTACATC+TGG | + | chr4.3:88932131-88932150 | MS.gene053283:CDS | 35.0% |
| !! | ATTGCATATTTTGGGGACTT+TGG | + | chr4.3:88935014-88935033 | MS.gene053283:intron | 35.0% |
| !! | CCATGGATTAGTTCATAAAG+TGG | + | chr4.3:88932677-88932696 | MS.gene053283:intron | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | - | chr4.3:88932830-88932849 | None:intergenic | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | - | chr4.3:88933781-88933800 | None:intergenic | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | - | chr4.3:88932820-88932839 | None:intergenic | 35.0% |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | + | chr4.3:88932356-88932375 | MS.gene053283:CDS | 35.0% |
| AAACAATGTGTGGCAAGTGT+TGG | - | chr4.3:88932636-88932655 | None:intergenic | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | - | chr4.3:88932122-88932141 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | - | chr4.3:88933928-88933947 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | + | chr4.3:88931701-88931720 | MS.gene053283:CDS | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | - | chr4.3:88933927-88933946 | None:intergenic | 40.0% | |
| ACAACGGAATCGTCAACATA+AGG | - | chr4.3:88935186-88935205 | None:intergenic | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | + | chr4.3:88932532-88932551 | MS.gene053283:CDS | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | + | chr4.3:88932303-88932322 | MS.gene053283:CDS | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | - | chr4.3:88933434-88933453 | None:intergenic | 40.0% | |
| ATGAAACAAGGGGGGATATT+TGG | + | chr4.3:88934278-88934297 | MS.gene053283:intron | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | - | chr4.3:88932197-88932216 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | - | chr4.3:88933505-88933524 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | + | chr4.3:88932523-88932542 | MS.gene053283:CDS | 40.0% | |
| CATTAAACAACGCTCCTTCA+AGG | + | chr4.3:88931868-88931887 | MS.gene053283:CDS | 40.0% | |
| CATTGCTTAGCTGATGAGAT+GGG | - | chr4.3:88931689-88931708 | None:intergenic | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | - | chr4.3:88934542-88934561 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | + | chr4.3:88933503-88933522 | MS.gene053283:intron | 40.0% | |
| CTACTTCAGCCTCAATGAAA+AGG | + | chr4.3:88931997-88932016 | MS.gene053283:CDS | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | + | chr4.3:88933561-88933580 | MS.gene053283:intron | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | - | chr4.3:88932525-88932544 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | - | chr4.3:88935504-88935523 | None:intergenic | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | + | chr4.3:88932531-88932550 | MS.gene053283:CDS | 40.0% | |
| GATGATGTTATGGTGCAACA+AGG | - | chr4.3:88934608-88934627 | None:intergenic | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | - | chr4.3:88932620-88932639 | None:intergenic | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | - | chr4.3:88933385-88933404 | None:intergenic | 40.0% | |
| TACATCTCTGACTTCCAATC+TGG | + | chr4.3:88935117-88935136 | MS.gene053283:CDS | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | + | chr4.3:88932026-88932045 | MS.gene053283:CDS | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | + | chr4.3:88934279-88934298 | MS.gene053283:intron | 40.0% | |
| TGCCATAACATCAGACATGA+AGG | - | chr4.3:88934872-88934891 | None:intergenic | 40.0% | |
| TGCCTTCATGTCTGATGTTA+TGG | + | chr4.3:88934867-88934886 | MS.gene053283:intron | 40.0% | |
| TGCGACTGCTTGAAATACTT+TGG | + | chr4.3:88933019-88933038 | MS.gene053283:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | + | chr4.3:88933025-88933044 | MS.gene053283:intron | 40.0% | |
| TTCACTTGGAATAGTTGTCG+TGG | + | chr4.3:88932443-88932462 | MS.gene053283:CDS | 40.0% | |
| TTCGTTATGGGATTCATTGC+TGG | + | chr4.3:88932341-88932360 | MS.gene053283:CDS | 40.0% | |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | + | chr4.3:88932412-88932431 | MS.gene053283:CDS | 40.0% |
| ! | CAATAAGGAGTATGGCATTG+CGG | - | chr4.3:88932388-88932407 | None:intergenic | 40.0% |
| ! | CCATCATAGTCATCGACTAT+TGG | + | chr4.3:88934539-88934558 | MS.gene053283:intron | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | + | chr4.3:88933612-88933631 | MS.gene053283:intron | 40.0% |
| ! | CTAGATTTGGAACCATCCAT+AGG | - | chr4.3:88931837-88931856 | None:intergenic | 40.0% |
| ! | GGGTTACTTAAGCTTTAGTG+GGG | + | chr4.3:88934299-88934318 | MS.gene053283:intron | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | + | chr4.3:88934268-88934287 | MS.gene053283:intron | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | + | chr4.3:88934266-88934285 | MS.gene053283:intron | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | + | chr4.3:88935155-88935174 | MS.gene053283:CDS | 40.0% |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | + | chr4.3:88934244-88934263 | MS.gene053283:intron | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | + | chr4.3:88934269-88934288 | MS.gene053283:intron | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | + | chr4.3:88935154-88935173 | MS.gene053283:CDS | 40.0% |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | - | chr4.3:88933608-88933627 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | - | chr4.3:88932311-88932330 | None:intergenic | 40.0% |
| !! | CAGACCACAATATTGGCTTT+GGG | - | chr4.3:88932310-88932329 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | + | chr4.3:88935141-88935160 | MS.gene053283:CDS | 40.0% |
| !! | CTTGAAGGAGCGTTGTTTAA+TGG | - | chr4.3:88931870-88931889 | None:intergenic | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | + | chr4.3:88935147-88935166 | MS.gene053283:CDS | 40.0% |
| !! | TAAACATCGCCGTTTTACCT+GGG | + | chr4.3:88932912-88932931 | MS.gene053283:CDS | 40.0% |
| !!! | ATTTTTCCAGCTAGCCTTGA+AGG | + | chr4.3:88935517-88935536 | MS.gene053283:CDS | 40.0% |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | - | chr4.3:88935143-88935162 | None:intergenic | 40.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | - | chr4.3:88932924-88932943 | None:intergenic | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | + | chr4.3:88932495-88932514 | MS.gene053283:CDS | 45.0% | |
| AATGGACCAGAAACCTTCCT+TGG | - | chr4.3:88932179-88932198 | None:intergenic | 45.0% | |
| ACAATACCTTCAAGGCTAGC+TGG | - | chr4.3:88935526-88935545 | None:intergenic | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | + | chr4.3:88931702-88931721 | MS.gene053283:CDS | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | + | chr4.3:88932028-88932047 | MS.gene053283:CDS | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | - | chr4.3:88931756-88931775 | None:intergenic | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | + | chr4.3:88932027-88932046 | MS.gene053283:CDS | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | + | chr4.3:88931687-88931706 | MS.gene053283:CDS | 45.0% | |
| CCATTGCTTAGCTGATGAGA+TGG | - | chr4.3:88931690-88931709 | None:intergenic | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | + | chr4.3:88932461-88932480 | MS.gene053283:CDS | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | + | chr4.3:88932189-88932208 | MS.gene053283:CDS | 45.0% | |
| CTTGGAATAGTTGTCGTGGA+AGG | + | chr4.3:88932447-88932466 | MS.gene053283:CDS | 45.0% | |
| GCCATATCTCTAGGCAATGT+GGG | + | chr4.3:88933570-88933589 | MS.gene053283:intron | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | + | chr4.3:88932530-88932549 | MS.gene053283:CDS | 45.0% | |
| GGGGACATGTCTTTATTCTC+CGG | - | chr4.3:88935222-88935241 | None:intergenic | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | - | chr4.3:88932035-88932054 | None:intergenic | 45.0% | |
| GTTATGGGATTCATTGCTGG+AGG | + | chr4.3:88932344-88932363 | MS.gene053283:CDS | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | + | chr4.3:88932034-88932053 | MS.gene053283:CDS | 45.0% | |
| TCAGGTAATCTATCTGCTGC+AGG | + | chr4.3:88931969-88931988 | MS.gene053283:CDS | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | + | chr4.3:88931765-88931784 | MS.gene053283:CDS | 45.0% | |
| TCATCGAAGATGAGATGGAG+TGG | + | chr4.3:88934350-88934369 | MS.gene053283:intron | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | - | chr4.3:88933574-88933593 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | + | chr4.3:88932188-88932207 | MS.gene053283:CDS | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | + | chr4.3:88934797-88934816 | MS.gene053283:intron | 45.0% | |
| TTAGCTGATCCCACTTGTGT+TGG | - | chr4.3:88934237-88934256 | None:intergenic | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | - | chr4.3:88931728-88931747 | None:intergenic | 45.0% | |
| ! | AACTAGGAGTGTGAGACAGA+TGG | + | chr4.3:88934147-88934166 | MS.gene053283:intron | 45.0% |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | + | chr4.3:88932415-88932434 | MS.gene053283:CDS | 45.0% |
| ! | ACTAGGAGTGTGAGACAGAT+GGG | + | chr4.3:88934148-88934167 | MS.gene053283:intron | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | - | chr4.3:88933609-88933628 | None:intergenic | 45.0% |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | - | chr4.3:88932294-88932313 | None:intergenic | 45.0% |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | - | chr4.3:88931930-88931949 | None:intergenic | 45.0% |
| ! | GTAAAGGCATGAAACAAGGG+GGG | + | chr4.3:88934270-88934289 | MS.gene053283:intron | 45.0% |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | - | chr4.3:88932113-88932132 | None:intergenic | 45.0% |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | - | chr4.3:88933607-88933626 | None:intergenic | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | + | chr4.3:88932913-88932932 | MS.gene053283:CDS | 45.0% |
| !! | CATATTTTGGGGACTTTGGC+AGG | + | chr4.3:88935018-88935037 | MS.gene053283:intron | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | + | chr4.3:88932911-88932930 | MS.gene053283:CDS | 45.0% |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | + | chr4.3:88932787-88932806 | MS.gene053283:intron | 45.0% |
| !! | GGCGGCTATGATGTTTTTGT+AGG | + | chr4.3:88935377-88935396 | MS.gene053283:intron | 45.0% |
| AACAACGCTCCTTCAAGGAC+TGG | + | chr4.3:88931873-88931892 | MS.gene053283:CDS | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | + | chr4.3:88932062-88932081 | MS.gene053283:CDS | 50.0% | |
| ACACTGAGAGTAGTCACAGC+TGG | - | chr4.3:88932257-88932276 | None:intergenic | 50.0% | |
| AGACAGATGGGAGAGTCATC+TGG | + | chr4.3:88934160-88934179 | MS.gene053283:intron | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | + | chr4.3:88932256-88932275 | MS.gene053283:CDS | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | + | chr4.3:88935411-88935430 | MS.gene053283:CDS | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | + | chr4.3:88934359-88934378 | MS.gene053283:intron | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | - | chr4.3:88935241-88935260 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | - | chr4.3:88935242-88935261 | None:intergenic | 50.0% | |
| CCAGTTGTTGGAAGAACTGG+AGG | - | chr4.3:88932119-88932138 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | - | chr4.3:88935243-88935262 | None:intergenic | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | - | chr4.3:88935244-88935263 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | + | chr4.3:88935240-88935259 | MS.gene053283:CDS | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | + | chr4.3:88935241-88935260 | MS.gene053283:CDS | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | + | chr4.3:88932116-88932135 | MS.gene053283:CDS | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | + | chr4.3:88931951-88931970 | MS.gene053283:CDS | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | - | chr4.3:88932806-88932825 | None:intergenic | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | + | chr4.3:88932050-88932069 | MS.gene053283:CDS | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | + | chr4.3:88933824-88933843 | MS.gene053283:intron | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | - | chr4.3:88931885-88931904 | None:intergenic | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | - | chr4.3:88932056-88932075 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | + | chr4.3:88933569-88933588 | MS.gene053283:intron | 50.0% | |
| GGTAGCACGGTTAGCGTAAT+GGG | + | chr4.3:88935412-88935431 | MS.gene053283:CDS | 50.0% | |
| GTCCTGAACAGCCGAAAGAA+AGG | + | chr4.3:88931727-88931746 | MS.gene053283:CDS | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | - | chr4.3:88931732-88931751 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | + | chr4.3:88931885-88931904 | MS.gene053283:CDS | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | - | chr4.3:88931787-88931806 | None:intergenic | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | + | chr4.3:88934360-88934379 | MS.gene053283:intron | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | - | chr4.3:88935251-88935270 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | - | chr4.3:88931780-88931799 | None:intergenic | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | + | chr4.3:88933810-88933829 | MS.gene053283:intron | 50.0% | |
| ! | AAGCTTTAGTGGGGTCAGAC+TGG | + | chr4.3:88934308-88934327 | MS.gene053283:intron | 50.0% |
| ! | TCATTGTTGTTGGGTGCAGG+GGG | - | chr4.3:88933606-88933625 | None:intergenic | 50.0% |
| ! | TGAATTCATCTGGGGCTCCA+AGG | + | chr4.3:88932159-88932178 | MS.gene053283:CDS | 50.0% |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | - | chr4.3:88932100-88932119 | None:intergenic | 50.0% |
| ACATTTCGCCCACTGGCATC+CGG | - | chr4.3:88935497-88935516 | None:intergenic | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | - | chr4.3:88932069-88932088 | None:intergenic | 55.0% | |
| CAACGAAGGCAGCTCAAGTG+TGG | + | chr4.3:88933641-88933660 | MS.gene053283:intron | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | - | chr4.3:88935134-88935153 | None:intergenic | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | + | chr4.3:88935239-88935258 | MS.gene053283:CDS | 55.0% | |
| CCCTCATGACCAAACCCGAT+GGG | + | chr4.3:88933408-88933427 | MS.gene053283:intron | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | - | chr4.3:88932932-88932951 | None:intergenic | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | + | chr4.3:88932150-88932169 | MS.gene053283:CDS | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | + | chr4.3:88932930-88932949 | MS.gene053283:CDS | 55.0% | |
| GAGATGGAGTGGTTGCAGAG+GGG | + | chr4.3:88934361-88934380 | MS.gene053283:intron | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | - | chr4.3:88932157-88932176 | None:intergenic | 55.0% | |
| GAGCTGAGGACAGCCAAGAA+TGG | + | chr4.3:88932509-88932528 | MS.gene053283:CDS | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | + | chr4.3:88931935-88931954 | MS.gene053283:CDS | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | - | chr4.3:88932158-88932177 | None:intergenic | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | + | chr4.3:88931786-88931805 | MS.gene053283:CDS | 55.0% | |
| GTTGCCATGCCTTATACCGG+CGG | + | chr4.3:88931768-88931787 | MS.gene053283:CDS | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | + | chr4.3:88932065-88932084 | MS.gene053283:CDS | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | + | chr4.3:88932149-88932168 | MS.gene053283:CDS | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | + | chr4.3:88932068-88932087 | MS.gene053283:CDS | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | + | chr4.3:88932151-88932170 | MS.gene053283:CDS | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | + | chr4.3:88932085-88932104 | MS.gene053283:CDS | 55.0% | |
| TGTCCCCCGATTTCCTTCGA+TGG | + | chr4.3:88935235-88935254 | MS.gene053283:CDS | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | + | chr4.3:88935486-88935505 | MS.gene053283:CDS | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | + | chr4.3:88933627-88933646 | MS.gene053283:intron | 55.0% |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | - | chr4.3:88933408-88933427 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | - | chr4.3:88933409-88933428 | None:intergenic | 55.0% |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | + | chr4.3:88935131-88935150 | MS.gene053283:CDS | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | - | chr4.3:88933410-88933429 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | - | chr4.3:88933411-88933430 | None:intergenic | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | + | chr4.3:88932429-88932448 | MS.gene053283:CDS | 55.0% |
| ! | GGCACCAGATTCGAGTTTCC+TGG | - | chr4.3:88933831-88933850 | None:intergenic | 55.0% |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | + | chr4.3:88932163-88932182 | MS.gene053283:CDS | 55.0% |
| CACTGGCATCCGGTCGTCAA+AGG | - | chr4.3:88935487-88935506 | None:intergenic | 60.0% | |
| CAGGACGGCCCGATACATAC+AGG | - | chr4.3:88931713-88931732 | None:intergenic | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | - | chr4.3:88935481-88935500 | None:intergenic | 60.0% | |
| CATGACCAAACCCGATGGGC+CGG | + | chr4.3:88933412-88933431 | MS.gene053283:intron | 60.0% | |
| CCCCTCATGACCAAACCCGA+TGG | + | chr4.3:88933407-88933426 | MS.gene053283:intron | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | + | chr4.3:88935475-88935494 | MS.gene053283:CDS | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | - | chr4.3:88932077-88932096 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | + | chr4.3:88935485-88935504 | MS.gene053283:CDS | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | - | chr4.3:88932503-88932522 | None:intergenic | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | + | chr4.3:88932170-88932189 | MS.gene053283:CDS | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | + | chr4.3:88932086-88932105 | MS.gene053283:CDS | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | - | chr4.3:88931775-88931794 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | - | chr4.3:88935475-88935494 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | - | chr4.3:88933403-88933422 | None:intergenic | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | - | chr4.3:88933426-88933445 | None:intergenic | 60.0% | |
| TGTTGTTGGGTGCAGGGGGT+GGG | - | chr4.3:88933602-88933621 | None:intergenic | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | - | chr4.3:88933412-88933431 | None:intergenic | 60.0% |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | - | chr4.3:88933407-88933426 | None:intergenic | 60.0% |
| ! | TTGTTGTTGGGTGCAGGGGG+TGG | - | chr4.3:88933603-88933622 | None:intergenic | 60.0% |
| !! | AGTGGGGTCAGACTGGTCTC+AGG | + | chr4.3:88934315-88934334 | MS.gene053283:intron | 60.0% |
| AACCCGATGGGCCGGAAGCA+TGG | + | chr4.3:88933420-88933439 | MS.gene053283:intron | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | - | chr4.3:88935478-88935497 | None:intergenic | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | - | chr4.3:88933425-88933444 | None:intergenic | 65.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | - | chr4.3:88933420-88933439 | None:intergenic | 65.0% | |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | + | chr4.3:88931903-88931922 | MS.gene053283:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 88931672 | 88935591 | 88931672 | ID=MS.gene053283 |
| chr4.3 | mRNA | 88931672 | 88935591 | 88931672 | ID=MS.gene053283.t1;Parent=MS.gene053283 |
| chr4.3 | exon | 88931672 | 88932553 | 88931672 | ID=MS.gene053283.t1.exon1;Parent=MS.gene053283.t1 |
| chr4.3 | CDS | 88931672 | 88932553 | 88931672 | ID=cds.MS.gene053283.t1;Parent=MS.gene053283.t1 |
| chr4.3 | exon | 88932796 | 88932951 | 88932796 | ID=MS.gene053283.t1.exon2;Parent=MS.gene053283.t1 |
| chr4.3 | CDS | 88932796 | 88932951 | 88932796 | ID=cds.MS.gene053283.t1;Parent=MS.gene053283.t1 |
| chr4.3 | exon | 88935099 | 88935310 | 88935099 | ID=MS.gene053283.t1.exon3;Parent=MS.gene053283.t1 |
| chr4.3 | CDS | 88935099 | 88935310 | 88935099 | ID=cds.MS.gene053283.t1;Parent=MS.gene053283.t1 |
| chr4.3 | exon | 88935399 | 88935591 | 88935399 | ID=MS.gene053283.t1.exon4;Parent=MS.gene053283.t1 |
| chr4.3 | CDS | 88935399 | 88935591 | 88935399 | ID=cds.MS.gene053283.t1;Parent=MS.gene053283.t1 |
| Gene Sequence |
| Protein sequence |
