Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053281.t1 | XP_013454502.1 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 3.10E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053281.t1 | Q9FZ45 | 71.2 | 483 | 127 | 3 | 1 | 480 | 1 | 474 | 2.4e-177 | 623.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053281.t1 | A0A072UHD8 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 2.2e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053281 | MS.gene053283 | 0.916184 | 2.42E-85 | -1.69E-46 |
| MS.gene053281 | MS.gene073062 | 0.806084 | 9.77E-50 | -1.69E-46 |
| MS.gene053281 | MS.gene34302 | 0.924589 | 5.76E-90 | -1.69E-46 |
| MS.gene053281 | MS.gene34348 | 0.991587 | 1.91E-188 | -1.69E-46 |
| MS.gene053281 | MS.gene34350 | 0.876836 | 1.02E-68 | -1.69E-46 |
| MS.gene053281 | MS.gene35668 | 0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene053281 | MS.gene46636 | 0.816405 | 5.62E-52 | -1.69E-46 |
| MS.gene053281 | MS.gene58738 | 0.805835 | 1.10E-49 | -1.69E-46 |
| MS.gene053281 | MS.gene58761 | 0.800109 | 1.68E-48 | -1.69E-46 |
| MS.gene053281 | MS.gene61081 | 0.801114 | 1.05E-48 | -1.69E-46 |
| MS.gene053281 | MS.gene61722 | 0.804589 | 2.01E-49 | -1.69E-46 |
| MS.gene053281 | MS.gene75918 | 0.803145 | 4.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053281.t1 | MTR_4g005510 | 99.167 | 480 | 2 | 1 | 1 | 480 | 1 | 478 | 0.0 | 969 |
| MS.gene053281.t1 | MTR_4g007930 | 79.098 | 488 | 93 | 3 | 1 | 480 | 1 | 487 | 0.0 | 785 |
| MS.gene053281.t1 | MTR_4g007930 | 70.697 | 488 | 83 | 4 | 1 | 480 | 1 | 436 | 0.0 | 678 |
| MS.gene053281.t1 | MTR_2g025190 | 48.866 | 485 | 186 | 10 | 1 | 480 | 1 | 428 | 6.09e-150 | 434 |
| MS.gene053281.t1 | MTR_4g094505 | 98.148 | 108 | 2 | 0 | 345 | 452 | 36 | 143 | 6.64e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053281.t1 | AT1G16860 | 74.433 | 485 | 108 | 6 | 1 | 480 | 1 | 474 | 0.0 | 717 |
| MS.gene053281.t1 | AT1G78880 | 74.433 | 485 | 102 | 7 | 1 | 480 | 1 | 468 | 0.0 | 716 |
| MS.gene053281.t1 | AT4G22290 | 49.170 | 482 | 206 | 8 | 1 | 480 | 1 | 445 | 2.39e-148 | 431 |
Find 139 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 4.3:-88997023 | MS.gene053281:CDS |
| CTTGAAGGAGCGTTGTTTAA+TGG | 0.228567 | 4.3:+88997686 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 4.3:-88997758 | MS.gene053281:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 4.3:+88997824 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 4.3:-88994312 | MS.gene053281:CDS |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 4.3:+88997031 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 4.3:-88997383 | MS.gene053281:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 4.3:+88997776 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 4.3:-88997668 | MS.gene053281:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 4.3:-88997404 | MS.gene053281:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 4.3:-88994435 | MS.gene053281:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 4.3:-88997710 | MS.gene053281:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 4.3:-88994313 | MS.gene053281:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 4.3:+88997434 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 4.3:+88994311 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.377574 | 4.3:-88997212 | MS.gene053281:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 4.3:+88997245 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 4.3:+88997456 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 4.3:-88994411 | MS.gene053281:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 4.3:+88997443 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 4.3:-88997365 | MS.gene053281:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 4.3:+88997359 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 4.3:+88994312 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 4.3:+88997160 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 4.3:-88994405 | MS.gene053281:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 4.3:-88994140 | MS.gene053281:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 4.3:+88997239 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 4.3:+88997815 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 4.3:-88997437 | MS.gene053281:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 4.3:-88997022 | MS.gene053281:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 4.3:+88997425 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 4.3:+88994021 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 4.3:-88997519 | MS.gene053281:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 4.3:-88997618 | MS.gene053281:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 4.3:+88997153 | None:intergenic |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 4.3:+88994421 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 4.3:-88997422 | MS.gene053281:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 4.3:+88997053 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 4.3:-88997124 | MS.gene053281:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 4.3:+88997500 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 4.3:-88997277 | MS.gene053281:CDS |
| ACAATACCTTCAAGGCTAGC+TGG | 0.445053 | 4.3:+88994029 | None:intergenic |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 4.3:-88997364 | MS.gene053281:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 4.3:-88997491 | MS.gene053281:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 4.3:-88994311 | MS.gene053281:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 4.3:+88997246 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 4.3:-88997650 | MS.gene053281:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 4.3:-88997757 | MS.gene053281:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 4.3:-88994264 | MS.gene053281:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 4.3:-88994077 | MS.gene053281:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 4.3:+88996632 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 4.3:+88997671 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 4.3:+88994074 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 4.3:-88997403 | MS.gene053281:CDS |
| GGGGACATGTCTTTATTCTC+CGG | 0.465892 | 4.3:+88994333 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 4.3:-88997092 | MS.gene053281:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 4.3:-88997468 | MS.gene053281:CDS |
| CATTAAACAACGCTCCTTCA+AGG | 0.481983 | 4.3:-88997685 | MS.gene053281:CDS |
| CGTTGTAATTGATGTCAATC+CGG | 0.482923 | 4.3:-88994352 | MS.gene053281:CDS |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 4.3:-88997602 | MS.gene053281:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 4.3:-88996688 | MS.gene053281:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 4.3:+88997349 | None:intergenic |
| ATGTTTGATATTCCTATGGA+TGG | 0.490543 | 4.3:-88997731 | MS.gene053281:CDS |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 4.3:-88994141 | MS.gene053281:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 4.3:+88994068 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 4.3:+88994058 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 4.3:+88997377 | None:intergenic |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 4.3:+88994080 | None:intergenic |
| GAAAATGTTTGATATTCCTA+TGG | 0.498329 | 4.3:-88997735 | MS.gene053281:CDS |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 4.3:-88997556 | MS.gene053281:CDS |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 4.3:+88994369 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 4.3:+88997800 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 4.3:-88997767 | MS.gene053281:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 4.3:+88996709 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 4.3:-88994421 | MS.gene053281:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 4.3:+88997262 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 4.3:-88997584 | MS.gene053281:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 4.3:-88997826 | MS.gene053281:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 4.3:-88997485 | MS.gene053281:CDS |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 4.3:-88997044 | MS.gene053281:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 4.3:-88997851 | MS.gene053281:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 4.3:-88997788 | MS.gene053281:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 4.3:-88997503 | MS.gene053281:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 4.3:-88994397 | MS.gene053281:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 4.3:+88997866 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 4.3:-88994398 | MS.gene053281:CDS |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 4.3:-88997852 | MS.gene053281:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 4.3:-88997390 | MS.gene053281:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 4.3:+88997399 | None:intergenic |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 4.3:-88996684 | MS.gene053281:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 4.3:+88994304 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.546115 | 4.3:+88997719 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 4.3:-88997892 | None:intergenic |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 4.3:-88997106 | MS.gene053281:CDS |
| AACAACGCTCCTTCAAGGAC+TGG | 0.554039 | 4.3:-88997680 | MS.gene053281:CDS |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 4.3:+88997843 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 4.3:+88996690 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 4.3:+88996624 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 4.3:+88994280 | None:intergenic |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 4.3:-88997394 | MS.gene053281:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 4.3:-88997488 | MS.gene053281:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 4.3:+88997867 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 4.3:+88997299 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 4.3:-88997030 | MS.gene053281:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 4.3:+88997828 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 4.3:+88994077 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 4.3:-88996683 | MS.gene053281:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 4.3:-88997467 | MS.gene053281:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 4.3:+88996750 | None:intergenic |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 4.3:-88997110 | MS.gene053281:CDS |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 4.3:+88997521 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 4.3:-88994067 | MS.gene053281:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 4.3:+88997769 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 4.3:-88997209 | MS.gene053281:CDS |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 4.3:-88997545 | MS.gene053281:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 4.3:+88997781 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 4.3:+88997398 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 4.3:-88997866 | MS.gene053281:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 4.3:-88994263 | MS.gene053281:intron |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 4.3:-88994466 | MS.gene053281:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 4.3:-88997526 | MS.gene053281:CDS |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 4.3:+88997437 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 4.3:+88997487 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 4.3:-88997021 | MS.gene053281:intron |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 4.3:+88994313 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 4.3:-88997527 | MS.gene053281:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 4.3:-88997058 | MS.gene053281:CDS |
| CGGATTGACATCAATTACAA+CGG | 0.656746 | 4.3:+88994353 | None:intergenic |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 4.3:-88997402 | MS.gene053281:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 4.3:-88994153 | MS.gene053281:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 4.3:-88994066 | MS.gene053281:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 4.3:-88997785 | MS.gene053281:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 4.3:-88996623 | MS.gene053281:intron |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 4.3:-88997250 | MS.gene053281:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 4.3:+88997168 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 4.3:+88997479 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 4.3:-88997297 | MS.gene053281:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 4.3:+88994314 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 4.3:-88997525 | MS.gene053281:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTCTTTCAAATAA+AGG | + | chr4.3:88997008-88997027 | None:intergenic | 10.0% |
| !! | AACTTATATACAATGAATTT+GGG | - | chr4.3:88995529-88995548 | MS.gene053281:intron | 15.0% |
| !! | TAACTTATATACAATGAATT+TGG | - | chr4.3:88995528-88995547 | MS.gene053281:intron | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | - | chr4.3:88996937-88996956 | MS.gene053281:intron | 15.0% |
| !!! | ATAATTATTTCTTTCTTGTT+TGG | - | chr4.3:88996883-88996902 | MS.gene053281:intron | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | - | chr4.3:88996729-88996748 | MS.gene053281:CDS | 15.0% |
| !!! | TAATTATTTCTTTCTTGTTT+GGG | - | chr4.3:88996884-88996903 | MS.gene053281:intron | 15.0% |
| !! | AAAGAATTACTACAACAATA+AGG | + | chr4.3:88994714-88994733 | None:intergenic | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | + | chr4.3:88995356-88995375 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | + | chr4.3:88996929-88996948 | None:intergenic | 20.0% |
| !! | CAAAAGTTAGAATATATCAA+TGG | + | chr4.3:88995084-88995103 | None:intergenic | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | + | chr4.3:88997391-88997410 | None:intergenic | 20.0% |
| !! | TAGATTATACCATGTAATTA+GGG | + | chr4.3:88995510-88995529 | None:intergenic | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | + | chr4.3:88996796-88996815 | None:intergenic | 20.0% |
| !! | TTAGATTATACCATGTAATT+AGG | + | chr4.3:88995511-88995530 | None:intergenic | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | - | chr4.3:88995632-88995651 | MS.gene053281:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | - | chr4.3:88995633-88995652 | MS.gene053281:intron | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | - | chr4.3:88996739-88996758 | MS.gene053281:CDS | 20.0% |
| !!! | TGATATATTCTAACTTTTGA+AGG | - | chr4.3:88995085-88995104 | MS.gene053281:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | + | chr4.3:88996256-88996275 | None:intergenic | 20.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | - | chr4.3:88997668-88997687 | MS.gene053281:CDS | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | + | chr4.3:88996199-88996218 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | - | chr4.3:88995498-88995517 | MS.gene053281:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | - | chr4.3:88995599-88995618 | MS.gene053281:intron | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | - | chr4.3:88996442-88996461 | MS.gene053281:intron | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | + | chr4.3:88996445-88996464 | None:intergenic | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | + | chr4.3:88995682-88995701 | None:intergenic | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | - | chr4.3:88995600-88995619 | MS.gene053281:intron | 25.0% |
| ! | GAAAATGTTTGATATTCCTA+TGG | - | chr4.3:88994129-88994148 | MS.gene053281:CDS | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | - | chr4.3:88997276-88997295 | MS.gene053281:CDS | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | + | chr4.3:88997258-88997277 | None:intergenic | 25.0% |
| ! | TTCAAATCATGAATGATTGA+TGG | - | chr4.3:88995051-88995070 | MS.gene053281:intron | 25.0% |
| ! | TTTCTTTCAATCTACAGTAA+GGG | + | chr4.3:88996311-88996330 | None:intergenic | 25.0% |
| !! | AATGCAAATTGCATATTTTG+GGG | - | chr4.3:88997319-88997338 | MS.gene053281:CDS | 25.0% |
| !! | AGAATGCAAATTGCATATTT+TGG | - | chr4.3:88997317-88997336 | MS.gene053281:CDS | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | - | chr4.3:88995783-88995802 | MS.gene053281:intron | 25.0% |
| !! | GAATGCAAATTGCATATTTT+GGG | - | chr4.3:88997318-88997337 | MS.gene053281:CDS | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | + | chr4.3:88995445-88995464 | None:intergenic | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | - | chr4.3:88995784-88995803 | MS.gene053281:intron | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | + | chr4.3:88996174-88996193 | None:intergenic | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | - | chr4.3:88997038-88997057 | MS.gene053281:CDS | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | + | chr4.3:88996175-88996194 | None:intergenic | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | - | chr4.3:88997703-88997722 | MS.gene053281:CDS | 25.0% |
| !!! | TATATTCTAACTTTTGAAGG+TGG | - | chr4.3:88995088-88995107 | MS.gene053281:intron | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | - | chr4.3:88997254-88997273 | MS.gene053281:CDS | 25.0% |
| AAATACAGTCAAACAATGTG+TGG | + | chr4.3:88994957-88994976 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | + | chr4.3:88995859-88995878 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | - | chr4.3:88995859-88995878 | MS.gene053281:intron | 30.0% | |
| ACTGGTAAGAGATAATCAAA+AGG | - | chr4.3:88995409-88995428 | MS.gene053281:intron | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | + | chr4.3:88995858-88995877 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | + | chr4.3:88996992-88997011 | None:intergenic | 30.0% | |
| ATCAAGAATAGTCCCTTATT+AGG | - | chr4.3:88997150-88997169 | MS.gene053281:CDS | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | + | chr4.3:88997846-88997865 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | + | chr4.3:88995827-88995846 | None:intergenic | 30.0% | |
| ATGCAACTTATAAATGGTAG+AGG | + | chr4.3:88996250-88996269 | None:intergenic | 30.0% | |
| ATGTTTGATATTCCTATGGA+TGG | - | chr4.3:88994133-88994152 | MS.gene053281:CDS | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | - | chr4.3:88996267-88996286 | MS.gene053281:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | + | chr4.3:88995555-88995574 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | - | chr4.3:88995680-88995699 | MS.gene053281:intron | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | + | chr4.3:88995683-88995702 | None:intergenic | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | - | chr4.3:88995410-88995429 | MS.gene053281:intron | 30.0% | |
| CTTGTATGAATATAGAGGAT+GGG | - | chr4.3:88995181-88995200 | MS.gene053281:intron | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | - | chr4.3:88997601-88997620 | MS.gene053281:CDS | 30.0% | |
| GTTTCTTTCAATCTACAGTA+AGG | + | chr4.3:88996312-88996331 | None:intergenic | 30.0% | |
| TAAAGGCTAGATAGAAACTA+GGG | + | chr4.3:88996991-88997010 | None:intergenic | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | - | chr4.3:88995683-88995702 | MS.gene053281:intron | 30.0% | |
| TACTACAACAATAAGGAGTA+TGG | + | chr4.3:88994707-88994726 | None:intergenic | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | + | chr4.3:88996288-88996307 | None:intergenic | 30.0% | |
| TCTATATTCATACAAGCTAG+TGG | + | chr4.3:88995177-88995196 | None:intergenic | 30.0% | |
| TCTTACAAACCAACTTTGTA+GGG | + | chr4.3:88995826-88995845 | None:intergenic | 30.0% | |
| TGCAATTTGCATTCTGATAT+AGG | + | chr4.3:88997312-88997331 | None:intergenic | 30.0% | |
| TGTCGAGTTCAAATAAAACT+TGG | + | chr4.3:88995304-88995323 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | - | chr4.3:88996536-88996555 | MS.gene053281:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | + | chr4.3:88995144-88995163 | None:intergenic | 30.0% |
| ! | ACTAGCTTGTATGAATATAG+AGG | - | chr4.3:88995176-88995195 | MS.gene053281:intron | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | - | chr4.3:88997092-88997111 | MS.gene053281:CDS | 30.0% |
| ! | ATGGACAATGTATCTAGAAT+AGG | - | chr4.3:88995750-88995769 | MS.gene053281:intron | 30.0% |
| ! | ATTTGATTTCATTGACCCTA+AGG | + | chr4.3:88994518-88994537 | None:intergenic | 30.0% |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | - | chr4.3:88997091-88997110 | MS.gene053281:CDS | 30.0% |
| ! | GTATTTTTCTCATTCATCCA+TGG | - | chr4.3:88994971-88994990 | MS.gene053281:intron | 30.0% |
| ! | GTGATTCTCATTTTCGTTAT+GGG | - | chr4.3:88994640-88994659 | MS.gene053281:intron | 30.0% |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | - | chr4.3:88994720-88994739 | MS.gene053281:intron | 30.0% |
| ! | TGTGATTCTCATTTTCGTTA+TGG | - | chr4.3:88994639-88994658 | MS.gene053281:intron | 30.0% |
| ! | TTCATTTTGTGCCAGAAAAT+TGG | + | chr4.3:88996365-88996384 | None:intergenic | 30.0% |
| !! | TCTTCTTTAGGGCTAATAAT+TGG | + | chr4.3:88996163-88996182 | None:intergenic | 30.0% |
| !! | TGTAATTTGCTTATGTGAAC+TGG | - | chr4.3:88995391-88995410 | MS.gene053281:intron | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | - | chr4.3:88996565-88996584 | MS.gene053281:intron | 30.0% |
| AACTTTCATCGAAGATGAGA+TGG | - | chr4.3:88996656-88996675 | MS.gene053281:CDS | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | + | chr4.3:88994628-88994647 | None:intergenic | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | + | chr4.3:88995789-88995808 | None:intergenic | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | - | chr4.3:88996102-88996121 | MS.gene053281:intron | 35.0% | |
| ATATCTTCACTATGTCGTAG+TGG | + | chr4.3:88996055-88996074 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | - | chr4.3:88994106-88994125 | MS.gene053281:CDS | 35.0% | |
| ATTGTTGGAGTCCTTTCTTT+CGG | + | chr4.3:88994052-88994071 | None:intergenic | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | + | chr4.3:88996537-88996556 | None:intergenic | 35.0% | |
| CATATAAGCATCTTCTAACG+CGG | - | chr4.3:88996417-88996436 | MS.gene053281:intron | 35.0% | |
| CCACTTTATGAACTAATCCA+TGG | + | chr4.3:88994991-88995010 | None:intergenic | 35.0% | |
| CGGATTGACATCAATTACAA+CGG | + | chr4.3:88997514-88997533 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | - | chr4.3:88997600-88997619 | MS.gene053281:CDS | 35.0% | |
| CGTTGTAATTGATGTCAATC+CGG | - | chr4.3:88997512-88997531 | MS.gene053281:CDS | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | + | chr4.3:88994442-88994461 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | + | chr4.3:88995863-88995882 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | - | chr4.3:88995180-88995199 | MS.gene053281:intron | 35.0% | |
| GGTTCCAAATCTAGAAAATC+TGG | - | chr4.3:88994154-88994173 | MS.gene053281:CDS | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | - | chr4.3:88997711-88997730 | MS.gene053281:CDS | 35.0% | |
| GTGGATGTATATACACATCT+TGG | + | chr4.3:88995158-88995177 | None:intergenic | 35.0% | |
| TATCTTCACTATGTCGTAGT+GGG | + | chr4.3:88996054-88996073 | None:intergenic | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | - | chr4.3:88994107-88994126 | MS.gene053281:CDS | 35.0% | |
| TCAATGAAAAGGACAAACTC+AGG | - | chr4.3:88994319-88994338 | MS.gene053281:CDS | 35.0% | |
| TCATCTTCGATGAAAGTTCT+TGG | + | chr4.3:88996654-88996673 | None:intergenic | 35.0% | |
| TCCAACACTTTCATTGTTGT+TGG | + | chr4.3:88995927-88995946 | None:intergenic | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | - | chr4.3:88997671-88997690 | MS.gene053281:CDS | 35.0% | |
| TGACATAGCAAACATCAGAA+TGG | - | chr4.3:88996098-88996117 | MS.gene053281:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | + | chr4.3:88997587-88997606 | None:intergenic | 35.0% | |
| TGGATGATGAATATTCCTTC+AGG | - | chr4.3:88994587-88994606 | MS.gene053281:intron | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | - | chr4.3:88997398-88997417 | MS.gene053281:CDS | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | - | chr4.3:88995546-88995565 | MS.gene053281:intron | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | - | chr4.3:88996535-88996554 | MS.gene053281:intron | 35.0% |
| ! | CCAACACTTTCATTGTTGTT+GGG | + | chr4.3:88995926-88995945 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | - | chr4.3:88997093-88997112 | MS.gene053281:CDS | 35.0% |
| ! | GAAGGCATACTACCTAATAA+GGG | + | chr4.3:88997165-88997184 | None:intergenic | 35.0% |
| ! | TACACGTTCAACCAATTTTC+TGG | - | chr4.3:88996351-88996370 | MS.gene053281:intron | 35.0% |
| ! | TGAAGGCATACTACCTAATA+AGG | + | chr4.3:88997166-88997185 | None:intergenic | 35.0% |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | + | chr4.3:88996785-88996804 | None:intergenic | 35.0% |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | + | chr4.3:88994320-88994339 | None:intergenic | 35.0% |
| ! | TGGACCAGATTTTCTAGATT+TGG | + | chr4.3:88994161-88994180 | None:intergenic | 35.0% |
| ! | TGGGTTACTTAAGCTTTAGT+GGG | - | chr4.3:88996609-88996628 | MS.gene053281:intron | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | - | chr4.3:88996578-88996597 | MS.gene053281:intron | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | - | chr4.3:88997094-88997113 | MS.gene053281:CDS | 35.0% |
| ! | TTGGGTTACTTAAGCTTTAG+TGG | - | chr4.3:88996608-88996627 | MS.gene053281:intron | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | - | chr4.3:88997105-88997124 | MS.gene053281:CDS | 35.0% |
| !! | AACAACAATGAAAGTGTTGG+AGG | - | chr4.3:88995926-88995945 | MS.gene053281:intron | 35.0% |
| !! | ACAACTGGTTTGATTACATC+TGG | - | chr4.3:88994442-88994461 | MS.gene053281:CDS | 35.0% |
| !! | ATTGCATATTTTGGGGACTT+TGG | - | chr4.3:88997326-88997345 | MS.gene053281:CDS | 35.0% |
| !! | CCATGGATTAGTTCATAAAG+TGG | - | chr4.3:88994988-88995007 | MS.gene053281:intron | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | + | chr4.3:88995141-88995160 | None:intergenic | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | + | chr4.3:88996092-88996111 | None:intergenic | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | + | chr4.3:88995131-88995150 | None:intergenic | 35.0% |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | - | chr4.3:88994667-88994686 | MS.gene053281:intron | 35.0% |
| AAACAATGTGTGGCAAGTGT+TGG | + | chr4.3:88994947-88994966 | None:intergenic | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | + | chr4.3:88994433-88994452 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | + | chr4.3:88996239-88996258 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | - | chr4.3:88994012-88994031 | MS.gene053281:CDS | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | + | chr4.3:88996238-88996257 | None:intergenic | 40.0% | |
| ACAACGGAATCGTCAACATA+AGG | + | chr4.3:88997498-88997517 | None:intergenic | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | - | chr4.3:88994843-88994862 | MS.gene053281:intron | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | - | chr4.3:88994614-88994633 | MS.gene053281:intron | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | + | chr4.3:88995745-88995764 | None:intergenic | 40.0% | |
| ATGAAACAAGGGGGGATATT+TGG | - | chr4.3:88996589-88996608 | MS.gene053281:intron | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | + | chr4.3:88994508-88994527 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | + | chr4.3:88995816-88995835 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | - | chr4.3:88994834-88994853 | MS.gene053281:intron | 40.0% | |
| CATTAAACAACGCTCCTTCA+AGG | - | chr4.3:88994179-88994198 | MS.gene053281:intron | 40.0% | |
| CATTGCTTAGCTGATGAGAT+GGG | + | chr4.3:88994000-88994019 | None:intergenic | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | + | chr4.3:88996853-88996872 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | - | chr4.3:88995814-88995833 | MS.gene053281:intron | 40.0% | |
| CTACTTCAGCCTCAATGAAA+AGG | - | chr4.3:88994308-88994327 | MS.gene053281:CDS | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | - | chr4.3:88995872-88995891 | MS.gene053281:intron | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | + | chr4.3:88994836-88994855 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | + | chr4.3:88997816-88997835 | None:intergenic | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | - | chr4.3:88994842-88994861 | MS.gene053281:intron | 40.0% | |
| GATGATGTTATGGTGCAACA+AGG | + | chr4.3:88996919-88996938 | None:intergenic | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | + | chr4.3:88994931-88994950 | None:intergenic | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | + | chr4.3:88995696-88995715 | None:intergenic | 40.0% | |
| TACATCTCTGACTTCCAATC+TGG | - | chr4.3:88997429-88997448 | MS.gene053281:CDS | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | - | chr4.3:88994337-88994356 | MS.gene053281:CDS | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | - | chr4.3:88996590-88996609 | MS.gene053281:intron | 40.0% | |
| TGCCATAACATCAGACATGA+AGG | + | chr4.3:88997183-88997202 | None:intergenic | 40.0% | |
| TGCCTTCATGTCTGATGTTA+TGG | - | chr4.3:88997178-88997197 | MS.gene053281:CDS | 40.0% | |
| TGCGACTGCTTGAAATACTT+TGG | - | chr4.3:88995330-88995349 | MS.gene053281:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | - | chr4.3:88995336-88995355 | MS.gene053281:intron | 40.0% | |
| TTCACTTGGAATAGTTGTCG+TGG | - | chr4.3:88994754-88994773 | MS.gene053281:intron | 40.0% | |
| TTCGTTATGGGATTCATTGC+TGG | - | chr4.3:88994652-88994671 | MS.gene053281:intron | 40.0% | |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | - | chr4.3:88994723-88994742 | MS.gene053281:intron | 40.0% |
| ! | CAATAAGGAGTATGGCATTG+CGG | + | chr4.3:88994699-88994718 | None:intergenic | 40.0% |
| ! | CCATCATAGTCATCGACTAT+TGG | - | chr4.3:88996850-88996869 | MS.gene053281:intron | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | - | chr4.3:88995923-88995942 | MS.gene053281:intron | 40.0% |
| ! | CTAGATTTGGAACCATCCAT+AGG | + | chr4.3:88994148-88994167 | None:intergenic | 40.0% |
| ! | GGGTTACTTAAGCTTTAGTG+GGG | - | chr4.3:88996610-88996629 | MS.gene053281:intron | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | - | chr4.3:88996579-88996598 | MS.gene053281:intron | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | - | chr4.3:88996577-88996596 | MS.gene053281:intron | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | - | chr4.3:88997467-88997486 | MS.gene053281:CDS | 40.0% |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | - | chr4.3:88996555-88996574 | MS.gene053281:intron | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | - | chr4.3:88996580-88996599 | MS.gene053281:intron | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | - | chr4.3:88997466-88997485 | MS.gene053281:CDS | 40.0% |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | + | chr4.3:88995919-88995938 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | + | chr4.3:88994622-88994641 | None:intergenic | 40.0% |
| !! | CAGACCACAATATTGGCTTT+GGG | + | chr4.3:88994621-88994640 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | - | chr4.3:88997453-88997472 | MS.gene053281:CDS | 40.0% |
| !! | CTTGAAGGAGCGTTGTTTAA+TGG | + | chr4.3:88994181-88994200 | None:intergenic | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | - | chr4.3:88997459-88997478 | MS.gene053281:CDS | 40.0% |
| !! | TAAACATCGCCGTTTTACCT+GGG | - | chr4.3:88995223-88995242 | MS.gene053281:intron | 40.0% |
| !!! | ATTTTTCCAGCTAGCCTTGA+AGG | - | chr4.3:88997829-88997848 | MS.gene053281:CDS | 40.0% |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | + | chr4.3:88997455-88997474 | None:intergenic | 40.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | + | chr4.3:88995235-88995254 | None:intergenic | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | - | chr4.3:88994806-88994825 | MS.gene053281:intron | 45.0% | |
| AATGGACCAGAAACCTTCCT+TGG | + | chr4.3:88994490-88994509 | None:intergenic | 45.0% | |
| ACAATACCTTCAAGGCTAGC+TGG | + | chr4.3:88997838-88997857 | None:intergenic | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | - | chr4.3:88994013-88994032 | MS.gene053281:CDS | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | - | chr4.3:88994339-88994358 | MS.gene053281:CDS | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | + | chr4.3:88994067-88994086 | None:intergenic | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | - | chr4.3:88994338-88994357 | MS.gene053281:CDS | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | - | chr4.3:88993998-88994017 | MS.gene053281:CDS | 45.0% | |
| CCATTGCTTAGCTGATGAGA+TGG | + | chr4.3:88994001-88994020 | None:intergenic | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | - | chr4.3:88994772-88994791 | MS.gene053281:intron | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | - | chr4.3:88994500-88994519 | MS.gene053281:intron | 45.0% | |
| CTTGGAATAGTTGTCGTGGA+AGG | - | chr4.3:88994758-88994777 | MS.gene053281:intron | 45.0% | |
| GCCATATCTCTAGGCAATGT+GGG | - | chr4.3:88995881-88995900 | MS.gene053281:intron | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | - | chr4.3:88994841-88994860 | MS.gene053281:intron | 45.0% | |
| GGGGACATGTCTTTATTCTC+CGG | + | chr4.3:88997534-88997553 | None:intergenic | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | + | chr4.3:88994346-88994365 | None:intergenic | 45.0% | |
| GTTATGGGATTCATTGCTGG+AGG | - | chr4.3:88994655-88994674 | MS.gene053281:intron | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | - | chr4.3:88994345-88994364 | MS.gene053281:CDS | 45.0% | |
| TCAGGTAATCTATCTGCTGC+AGG | - | chr4.3:88994280-88994299 | MS.gene053281:CDS | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | - | chr4.3:88994076-88994095 | MS.gene053281:CDS | 45.0% | |
| TCATCGAAGATGAGATGGAG+TGG | - | chr4.3:88996661-88996680 | MS.gene053281:CDS | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | + | chr4.3:88995885-88995904 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | - | chr4.3:88994499-88994518 | MS.gene053281:intron | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | - | chr4.3:88997108-88997127 | MS.gene053281:CDS | 45.0% | |
| TTAGCTGATCCCACTTGTGT+TGG | + | chr4.3:88996548-88996567 | None:intergenic | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | + | chr4.3:88994039-88994058 | None:intergenic | 45.0% | |
| ! | AACTAGGAGTGTGAGACAGA+TGG | - | chr4.3:88996458-88996477 | MS.gene053281:intron | 45.0% |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | - | chr4.3:88994726-88994745 | MS.gene053281:intron | 45.0% |
| ! | ACTAGGAGTGTGAGACAGAT+GGG | - | chr4.3:88996459-88996478 | MS.gene053281:intron | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | + | chr4.3:88995920-88995939 | None:intergenic | 45.0% |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | + | chr4.3:88994605-88994624 | None:intergenic | 45.0% |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | + | chr4.3:88994241-88994260 | None:intergenic | 45.0% |
| ! | GTAAAGGCATGAAACAAGGG+GGG | - | chr4.3:88996581-88996600 | MS.gene053281:intron | 45.0% |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | + | chr4.3:88994424-88994443 | None:intergenic | 45.0% |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | + | chr4.3:88995918-88995937 | None:intergenic | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | - | chr4.3:88995224-88995243 | MS.gene053281:intron | 45.0% |
| !! | CATATTTTGGGGACTTTGGC+AGG | - | chr4.3:88997330-88997349 | MS.gene053281:CDS | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | - | chr4.3:88995222-88995241 | MS.gene053281:intron | 45.0% |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | - | chr4.3:88995098-88995117 | MS.gene053281:intron | 45.0% |
| !! | GGCGGCTATGATGTTTTTGT+AGG | - | chr4.3:88997689-88997708 | MS.gene053281:CDS | 45.0% |
| AACAACGCTCCTTCAAGGAC+TGG | - | chr4.3:88994184-88994203 | MS.gene053281:intron | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | - | chr4.3:88994373-88994392 | MS.gene053281:CDS | 50.0% | |
| ACACTGAGAGTAGTCACAGC+TGG | + | chr4.3:88994568-88994587 | None:intergenic | 50.0% | |
| AGACAGATGGGAGAGTCATC+TGG | - | chr4.3:88996471-88996490 | MS.gene053281:intron | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | - | chr4.3:88994567-88994586 | MS.gene053281:intron | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | - | chr4.3:88997723-88997742 | MS.gene053281:CDS | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | - | chr4.3:88996670-88996689 | MS.gene053281:CDS | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | + | chr4.3:88997553-88997572 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | + | chr4.3:88997554-88997573 | None:intergenic | 50.0% | |
| CCAGTTGTTGGAAGAACTGG+AGG | + | chr4.3:88994430-88994449 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | + | chr4.3:88997555-88997574 | None:intergenic | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | + | chr4.3:88997556-88997575 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | - | chr4.3:88997552-88997571 | MS.gene053281:CDS | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | - | chr4.3:88997553-88997572 | MS.gene053281:CDS | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | - | chr4.3:88994427-88994446 | MS.gene053281:CDS | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | - | chr4.3:88994262-88994281 | MS.gene053281:intron | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | + | chr4.3:88995117-88995136 | None:intergenic | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | - | chr4.3:88994361-88994380 | MS.gene053281:CDS | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | - | chr4.3:88996135-88996154 | MS.gene053281:intron | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | + | chr4.3:88994196-88994215 | None:intergenic | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | + | chr4.3:88994367-88994386 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | - | chr4.3:88995880-88995899 | MS.gene053281:intron | 50.0% | |
| GGTAGCACGGTTAGCGTAAT+GGG | - | chr4.3:88997724-88997743 | MS.gene053281:CDS | 50.0% | |
| GTCCTGAACAGCCGAAAGAA+AGG | - | chr4.3:88994038-88994057 | MS.gene053281:CDS | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | + | chr4.3:88994043-88994062 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | - | chr4.3:88994196-88994215 | MS.gene053281:intron | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | + | chr4.3:88994098-88994117 | None:intergenic | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | - | chr4.3:88996671-88996690 | MS.gene053281:CDS | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | + | chr4.3:88997563-88997582 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | + | chr4.3:88994091-88994110 | None:intergenic | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | - | chr4.3:88996121-88996140 | MS.gene053281:intron | 50.0% | |
| ! | AAGCTTTAGTGGGGTCAGAC+TGG | - | chr4.3:88996619-88996638 | MS.gene053281:intron | 50.0% |
| ! | TCATTGTTGTTGGGTGCAGG+GGG | + | chr4.3:88995917-88995936 | None:intergenic | 50.0% |
| ! | TGAATTCATCTGGGGCTCCA+AGG | - | chr4.3:88994470-88994489 | MS.gene053281:intron | 50.0% |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | + | chr4.3:88994411-88994430 | None:intergenic | 50.0% |
| ACATTTCGCCCACTGGCATC+CGG | + | chr4.3:88997809-88997828 | None:intergenic | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | + | chr4.3:88994380-88994399 | None:intergenic | 55.0% | |
| CAACGAAGGCAGCTCAAGTG+TGG | - | chr4.3:88995952-88995971 | MS.gene053281:intron | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | + | chr4.3:88997446-88997465 | None:intergenic | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | - | chr4.3:88997551-88997570 | MS.gene053281:CDS | 55.0% | |
| CCCTCATGACCAAACCCGAT+GGG | - | chr4.3:88995719-88995738 | MS.gene053281:intron | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | + | chr4.3:88995243-88995262 | None:intergenic | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | - | chr4.3:88994461-88994480 | MS.gene053281:intron | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | - | chr4.3:88995241-88995260 | MS.gene053281:intron | 55.0% | |
| GAGATGGAGTGGTTGCAGAG+GGG | - | chr4.3:88996672-88996691 | MS.gene053281:CDS | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | + | chr4.3:88994468-88994487 | None:intergenic | 55.0% | |
| GAGCTGAGGACAGCCAAGAA+TGG | - | chr4.3:88994820-88994839 | MS.gene053281:intron | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | - | chr4.3:88994246-88994265 | MS.gene053281:intron | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | + | chr4.3:88994469-88994488 | None:intergenic | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | - | chr4.3:88994097-88994116 | MS.gene053281:CDS | 55.0% | |
| GTTGCCATGCCTTATACCGG+CGG | - | chr4.3:88994079-88994098 | MS.gene053281:CDS | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | - | chr4.3:88994376-88994395 | MS.gene053281:CDS | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | - | chr4.3:88994460-88994479 | MS.gene053281:intron | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | - | chr4.3:88994379-88994398 | MS.gene053281:CDS | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | - | chr4.3:88994462-88994481 | MS.gene053281:intron | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | - | chr4.3:88994396-88994415 | MS.gene053281:CDS | 55.0% | |
| TGTCCCCCGATTTCCTTCGA+TGG | - | chr4.3:88997547-88997566 | MS.gene053281:CDS | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | - | chr4.3:88997798-88997817 | MS.gene053281:CDS | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | - | chr4.3:88995938-88995957 | MS.gene053281:intron | 55.0% |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | + | chr4.3:88995719-88995738 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | + | chr4.3:88995720-88995739 | None:intergenic | 55.0% |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | - | chr4.3:88997443-88997462 | MS.gene053281:CDS | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | + | chr4.3:88995721-88995740 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | + | chr4.3:88995722-88995741 | None:intergenic | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | - | chr4.3:88994740-88994759 | MS.gene053281:intron | 55.0% |
| ! | GGCACCAGATTCGAGTTTCC+TGG | + | chr4.3:88996142-88996161 | None:intergenic | 55.0% |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | - | chr4.3:88994474-88994493 | MS.gene053281:intron | 55.0% |
| CACTGGCATCCGGTCGTCAA+AGG | + | chr4.3:88997799-88997818 | None:intergenic | 60.0% | |
| CAGGACGGCCCGATACATAC+AGG | + | chr4.3:88994024-88994043 | None:intergenic | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | + | chr4.3:88997793-88997812 | None:intergenic | 60.0% | |
| CATGACCAAACCCGATGGGC+CGG | - | chr4.3:88995723-88995742 | MS.gene053281:intron | 60.0% | |
| CCCCTCATGACCAAACCCGA+TGG | - | chr4.3:88995718-88995737 | MS.gene053281:intron | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | - | chr4.3:88997787-88997806 | MS.gene053281:CDS | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | + | chr4.3:88994388-88994407 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | - | chr4.3:88997797-88997816 | MS.gene053281:CDS | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | + | chr4.3:88994814-88994833 | None:intergenic | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | - | chr4.3:88994481-88994500 | MS.gene053281:intron | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | - | chr4.3:88994397-88994416 | MS.gene053281:CDS | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | + | chr4.3:88994086-88994105 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | + | chr4.3:88997787-88997806 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | + | chr4.3:88995714-88995733 | None:intergenic | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | + | chr4.3:88995737-88995756 | None:intergenic | 60.0% | |
| TGTTGTTGGGTGCAGGGGGT+GGG | + | chr4.3:88995913-88995932 | None:intergenic | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | + | chr4.3:88995723-88995742 | None:intergenic | 60.0% |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | + | chr4.3:88995718-88995737 | None:intergenic | 60.0% |
| ! | TTGTTGTTGGGTGCAGGGGG+TGG | + | chr4.3:88995914-88995933 | None:intergenic | 60.0% |
| !! | AGTGGGGTCAGACTGGTCTC+AGG | - | chr4.3:88996626-88996645 | MS.gene053281:CDS | 60.0% |
| AACCCGATGGGCCGGAAGCA+TGG | - | chr4.3:88995731-88995750 | MS.gene053281:intron | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | + | chr4.3:88997790-88997809 | None:intergenic | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | + | chr4.3:88995736-88995755 | None:intergenic | 65.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | + | chr4.3:88995731-88995750 | None:intergenic | 65.0% | |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | - | chr4.3:88994214-88994233 | MS.gene053281:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 88993983 | 88997903 | 88993983 | ID=MS.gene053281 |
| chr4.3 | mRNA | 88993983 | 88997903 | 88993983 | ID=MS.gene053281.t1;Parent=MS.gene053281 |
| chr4.3 | exon | 88997022 | 88997903 | 88997022 | ID=MS.gene053281.t1.exon1;Parent=MS.gene053281.t1 |
| chr4.3 | CDS | 88997022 | 88997903 | 88997022 | ID=cds.MS.gene053281.t1;Parent=MS.gene053281.t1 |
| chr4.3 | exon | 88996624 | 88996779 | 88996624 | ID=MS.gene053281.t1.exon2;Parent=MS.gene053281.t1 |
| chr4.3 | CDS | 88996624 | 88996779 | 88996624 | ID=cds.MS.gene053281.t1;Parent=MS.gene053281.t1 |
| chr4.3 | exon | 88994264 | 88994475 | 88994264 | ID=MS.gene053281.t1.exon3;Parent=MS.gene053281.t1 |
| chr4.3 | CDS | 88994264 | 88994475 | 88994264 | ID=cds.MS.gene053281.t1;Parent=MS.gene053281.t1 |
| chr4.3 | exon | 88993983 | 88994175 | 88993983 | ID=MS.gene053281.t1.exon4;Parent=MS.gene053281.t1 |
| chr4.3 | CDS | 88993983 | 88994175 | 88993983 | ID=cds.MS.gene053281.t1;Parent=MS.gene053281.t1 |
| Gene Sequence |
| Protein sequence |
