Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34348.t1 | XP_013454502.1 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 3.10E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34348.t1 | Q9FZ45 | 71.2 | 483 | 127 | 3 | 1 | 480 | 1 | 474 | 2.4e-177 | 623.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34348.t1 | A0A072UHD8 | 98.8 | 480 | 4 | 1 | 1 | 480 | 1 | 478 | 2.2e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053281 | MS.gene34348 | 0.991587 | 1.91E-188 | -1.69E-46 |
| MS.gene053283 | MS.gene34348 | 0.91796 | 2.80E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34348.t1 | MTR_4g005510 | 99.167 | 480 | 2 | 1 | 1 | 480 | 1 | 478 | 0.0 | 969 |
| MS.gene34348.t1 | MTR_4g007930 | 79.098 | 488 | 93 | 3 | 1 | 480 | 1 | 487 | 0.0 | 785 |
| MS.gene34348.t1 | MTR_4g007930 | 70.697 | 488 | 83 | 4 | 1 | 480 | 1 | 436 | 0.0 | 678 |
| MS.gene34348.t1 | MTR_2g025190 | 48.866 | 485 | 186 | 10 | 1 | 480 | 1 | 428 | 6.09e-150 | 434 |
| MS.gene34348.t1 | MTR_4g094505 | 98.148 | 108 | 2 | 0 | 345 | 452 | 36 | 143 | 6.64e-72 | 224 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34348.t1 | AT1G16860 | 74.433 | 485 | 108 | 6 | 1 | 480 | 1 | 474 | 0.0 | 717 |
| MS.gene34348.t1 | AT1G78880 | 74.433 | 485 | 102 | 7 | 1 | 480 | 1 | 468 | 0.0 | 716 |
| MS.gene34348.t1 | AT4G22290 | 49.170 | 482 | 206 | 8 | 1 | 480 | 1 | 445 | 2.39e-148 | 431 |
Find 139 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACAGTTTGTGAAGGTTTC+TGG | 0.153440 | 4.3:-89057747 | MS.gene34348:CDS |
| CTTGAAGGAGCGTTGTTTAA+TGG | 0.228567 | 4.3:+89058410 | None:intergenic |
| ATCAAGAAGTCAGGAGAATT+AGG | 0.233497 | 4.3:-89058482 | MS.gene34348:CDS |
| GTCCTTTCTTTCGGCTGTTC+AGG | 0.252687 | 4.3:+89058548 | None:intergenic |
| CCCGATTTCCTTCGATGGTT+GGG | 0.253082 | 4.3:-89055037 | MS.gene34348:CDS |
| CTTCACAAACTGTCCATTCT+TGG | 0.261830 | 4.3:+89057755 | None:intergenic |
| GGGGCTCCAAGGAAGGTTTC+TGG | 0.291580 | 4.3:-89058107 | MS.gene34348:CDS |
| TTGATGTCACCGCCGGTATA+AGG | 0.304998 | 4.3:+89058500 | None:intergenic |
| TCAAGGACTGGATCGTTTGC+AGG | 0.330635 | 4.3:-89058392 | MS.gene34348:CDS |
| TCTGGCCCGCTGAATTCATC+TGG | 0.342002 | 4.3:-89058128 | MS.gene34348:CDS |
| TACATCTCTGACTTCCAATC+TGG | 0.350537 | 4.3:-89055160 | MS.gene34348:CDS |
| GGTTCCAAATCTAGAAAATC+TGG | 0.360653 | 4.3:-89058434 | MS.gene34348:CDS |
| CCCCGATTTCCTTCGATGGT+TGG | 0.361108 | 4.3:-89055038 | MS.gene34348:CDS |
| AAACCAGTTGTTGGAAGAAC+TGG | 0.362727 | 4.3:+89058158 | None:intergenic |
| CCCCAACCATCGAAGGAAAT+CGG | 0.367647 | 4.3:+89055036 | None:intergenic |
| TTCGTTATGGGATTCATTGC+TGG | 0.377574 | 4.3:-89057936 | MS.gene34348:CDS |
| ACAGACCACAATATTGGCTT+TGG | 0.378088 | 4.3:+89057969 | None:intergenic |
| GAGGTATTGGACCCGAGTTT+TGG | 0.382636 | 4.3:+89058180 | None:intergenic |
| CTGAGAGCATTGGTTAAAAC+AGG | 0.383057 | 4.3:-89055136 | MS.gene34348:CDS |
| GTTGGAAGAACTGGAGGTAT+TGG | 0.387217 | 4.3:+89058167 | None:intergenic |
| TCTGGTCCATTAGAGTCCTT+AGG | 0.387635 | 4.3:-89058089 | MS.gene34348:CDS |
| ATTGACCCTAAGGACTCTAA+TGG | 0.391975 | 4.3:+89058083 | None:intergenic |
| CCCAACCATCGAAGGAAATC+GGG | 0.393298 | 4.3:+89055037 | None:intergenic |
| TACTACAACAATAAGGAGTA+TGG | 0.395337 | 4.3:+89057884 | None:intergenic |
| GCATTGGTTAAAACAGGCTT+TGG | 0.395936 | 4.3:-89055130 | MS.gene34348:CDS |
| GGTAGCACGGTTAGCGTAAT+GGG | 0.397403 | 4.3:-89054865 | MS.gene34348:CDS |
| AGAATCACAGACCACAATAT+TGG | 0.401174 | 4.3:+89057963 | None:intergenic |
| ATTGTTGGAGTCCTTTCTTT+CGG | 0.401281 | 4.3:+89058539 | None:intergenic |
| CCTCCAGTTCTTCCAACAAC+TGG | 0.402248 | 4.3:-89058161 | MS.gene34348:CDS |
| GACAGTTTGTGAAGGTTTCT+GGG | 0.407064 | 4.3:-89057746 | MS.gene34348:CDS |
| GATGTAATCAAACCAGTTGT+TGG | 0.409587 | 4.3:+89058149 | None:intergenic |
| ATCTCAAAACAATACCTTCA+AGG | 0.409889 | 4.3:+89054746 | None:intergenic |
| GTTGAATAAACACGGGGAAC+CGG | 0.414266 | 4.3:-89058243 | MS.gene34348:CDS |
| GCAAAACGCAGCAGCTCGTT+CGG | 0.414432 | 4.3:-89058342 | MS.gene34348:CDS |
| AAAGAATTACTACAACAATA+AGG | 0.422326 | 4.3:+89057877 | None:intergenic |
| CCAATGCTCTCAGGCCAGAT+TGG | 0.427585 | 4.3:+89055146 | None:intergenic |
| ACAACTGGTTTGATTACATC+TGG | 0.434300 | 4.3:-89058146 | MS.gene34348:CDS |
| GCTGTCCTCAGCTCTGCATC+AGG | 0.437236 | 4.3:+89057777 | None:intergenic |
| CGGTGGCGGCATTATTCACT+TGG | 0.440693 | 4.3:-89057848 | MS.gene34348:CDS |
| GGACCAGAGGACTTCTTAAC+CGG | 0.441130 | 4.3:+89058224 | None:intergenic |
| TGGATGATGAATATTCCTTC+AGG | 0.443248 | 4.3:-89058001 | MS.gene34348:CDS |
| ACAATACCTTCAAGGCTAGC+TGG | 0.445053 | 4.3:+89054754 | None:intergenic |
| CTGGTCCATTAGAGTCCTTA+GGG | 0.448812 | 4.3:-89058088 | MS.gene34348:CDS |
| AAGTCCTCTGGTCCTCAATC+AGG | 0.449552 | 4.3:-89058215 | MS.gene34348:CDS |
| CCGATTTCCTTCGATGGTTG+GGG | 0.450657 | 4.3:-89055036 | MS.gene34348:CDS |
| CAGACCACAATATTGGCTTT+GGG | 0.455761 | 4.3:+89057970 | None:intergenic |
| GCAGGCGCTGCTTCGCACTC+TGG | 0.461695 | 4.3:-89058374 | MS.gene34348:CDS |
| TCAAGAAGTCAGGAGAATTA+GGG | 0.462102 | 4.3:-89058481 | MS.gene34348:CDS |
| CGTATCATGCAGTTAAAAGA+AGG | 0.462235 | 4.3:-89054989 | MS.gene34348:CDS |
| CCTCCTGAGCCTTTGACGAC+CGG | 0.462807 | 4.3:-89054802 | MS.gene34348:CDS |
| AACGAAGTCCCCAGGTAAAA+CGG | 0.463388 | 4.3:+89057356 | None:intergenic |
| GCAAACGATCCAGTCCTTGA+AGG | 0.463630 | 4.3:+89058395 | None:intergenic |
| CATCCGGTCGTCAAAGGCTC+AGG | 0.463709 | 4.3:+89054799 | None:intergenic |
| CTGGCCCGCTGAATTCATCT+GGG | 0.463840 | 4.3:-89058127 | MS.gene34348:CDS |
| GGGGACATGTCTTTATTCTC+CGG | 0.465892 | 4.3:+89055058 | None:intergenic |
| CGTGGAAGGAAAGCTATTGT+TGG | 0.472794 | 4.3:-89057816 | MS.gene34348:CDS |
| TGGTGGCACACGCCAAAACT+CGG | 0.478089 | 4.3:-89058192 | MS.gene34348:CDS |
| CATTAAACAACGCTCCTTCA+AGG | 0.481983 | 4.3:-89058409 | MS.gene34348:CDS |
| CGTTGTAATTGATGTCAATC+CGG | 0.482923 | 4.3:-89055077 | MS.gene34348:CDS |
| CGTTCGGCTTATGTCACATC+AGG | 0.483108 | 4.3:-89058326 | MS.gene34348:CDS |
| ACTAGCTTGTATGAATATAG+AGG | 0.487035 | 4.3:-89057412 | MS.gene34348:CDS |
| ATTTGATTTCATTGACCCTA+AGG | 0.487683 | 4.3:+89058073 | None:intergenic |
| ATGTTTGATATTCCTATGGA+TGG | 0.490543 | 4.3:-89058455 | MS.gene34348:CDS |
| AGGTAGCACGGTTAGCGTAA+TGG | 0.490906 | 4.3:-89054866 | MS.gene34348:CDS |
| CACTGGCATCCGGTCGTCAA+AGG | 0.491248 | 4.3:+89054793 | None:intergenic |
| ACATTTCGCCCACTGGCATC+CGG | 0.492145 | 4.3:+89054783 | None:intergenic |
| AATGGACCAGAAACCTTCCT+TGG | 0.496121 | 4.3:+89058101 | None:intergenic |
| GTCGTCAAAGGCTCAGGAGG+AGG | 0.497151 | 4.3:+89054805 | None:intergenic |
| GAAAATGTTTGATATTCCTA+TGG | 0.498329 | 4.3:-89058459 | MS.gene34348:CDS |
| CTACTTCAGCCTCAATGAAA+AGG | 0.499132 | 4.3:-89058280 | MS.gene34348:CDS |
| ACAACGGAATCGTCAACATA+AGG | 0.503635 | 4.3:+89055094 | None:intergenic |
| ATGGCAACTGAGCTCATTGT+TGG | 0.505538 | 4.3:+89058524 | None:intergenic |
| GGCGGTGACATCAAGAAGTC+AGG | 0.506595 | 4.3:-89058491 | MS.gene34348:CDS |
| GTGGATGTATATACACATCT+TGG | 0.506836 | 4.3:+89057433 | None:intergenic |
| CCAATCTGGCCTGAGAGCAT+TGG | 0.509660 | 4.3:-89055146 | MS.gene34348:CDS |
| CTTTGGGAAGTTCTTCCTGA+AGG | 0.511332 | 4.3:+89057986 | None:intergenic |
| TCAGGTAATCTATCTGCTGC+AGG | 0.515107 | 4.3:-89058308 | MS.gene34348:CDS |
| GTCCTGAACAGCCGAAAGAA+AGG | 0.519111 | 4.3:-89058550 | MS.gene34348:CDS |
| TCTGGTCCTCAATCAGGTGG+TGG | 0.523811 | 4.3:-89058209 | MS.gene34348:CDS |
| GAGCTGAGGACAGCCAAGAA+TGG | 0.527974 | 4.3:-89057768 | MS.gene34348:CDS |
| AGCAATGGCCTGTATGTATC+GGG | 0.528003 | 4.3:-89058575 | MS.gene34348:CDS |
| TCAGTTGCCATGCCTTATAC+CGG | 0.528246 | 4.3:-89058512 | MS.gene34348:CDS |
| GAACCGGTTAAGAAGTCCTC+TGG | 0.529575 | 4.3:-89058227 | MS.gene34348:CDS |
| TAAAACAGGCTTTGGTGCAA+GGG | 0.531505 | 4.3:-89055122 | MS.gene34348:CDS |
| CCATTGCTTAGCTGATGAGA+TGG | 0.532954 | 4.3:+89058590 | None:intergenic |
| TTAAAACAGGCTTTGGTGCA+AGG | 0.533222 | 4.3:-89055123 | MS.gene34348:CDS |
| AAGCAATGGCCTGTATGTAT+CGG | 0.538649 | 4.3:-89058576 | MS.gene34348:CDS |
| TTCATCTGGGGCTCCAAGGA+AGG | 0.539779 | 4.3:-89058114 | MS.gene34348:CDS |
| GAGCCCCAGATGAATTCAGC+GGG | 0.540465 | 4.3:+89058123 | None:intergenic |
| GCTTGTATGAATATAGAGGA+TGG | 0.540592 | 4.3:-89057408 | MS.gene34348:CDS |
| TTCTCTTCCCCAACCATCGA+AGG | 0.543040 | 4.3:+89055029 | None:intergenic |
| CTAGATTTGGAACCATCCAT+AGG | 0.546115 | 4.3:+89058443 | None:intergenic |
| AGATATCAGTGATGGGTTCG+AGG | 0.547275 | 4.3:-89058616 | None:intergenic |
| CTTGGAATAGTTGTCGTGGA+AGG | 0.550581 | 4.3:-89057830 | MS.gene34348:CDS |
| AACAACGCTCCTTCAAGGAC+TGG | 0.554039 | 4.3:-89058404 | MS.gene34348:CDS |
| CAGGACGGCCCGATACATAC+AGG | 0.557100 | 4.3:+89058567 | None:intergenic |
| TCTATATTCATACAAGCTAG+TGG | 0.559080 | 4.3:+89057414 | None:intergenic |
| CTCAGTTGAACGAAGTCCCC+AGG | 0.559128 | 4.3:+89057348 | None:intergenic |
| TGATACGATCATCACTAGAA+AGG | 0.559142 | 4.3:+89055005 | None:intergenic |
| TGAATTCATCTGGGGCTCCA+AGG | 0.561974 | 4.3:-89058118 | MS.gene34348:CDS |
| TCCTCTGGTCCTCAATCAGG+TGG | 0.562994 | 4.3:-89058212 | MS.gene34348:CDS |
| CATTGCTTAGCTGATGAGAT+GGG | 0.563787 | 4.3:+89058591 | None:intergenic |
| ACACTGAGAGTAGTCACAGC+TGG | 0.564624 | 4.3:+89058023 | None:intergenic |
| CAAGAATGGACAGTTTGTGA+AGG | 0.570520 | 4.3:-89057754 | MS.gene34348:CDS |
| TTTCTTTCGGCTGTTCAGGA+CGG | 0.577953 | 4.3:+89058552 | None:intergenic |
| CCGGTCGTCAAAGGCTCAGG+AGG | 0.581282 | 4.3:+89054802 | None:intergenic |
| CTTGTATGAATATAGAGGAT+GGG | 0.582610 | 4.3:-89057407 | MS.gene34348:CDS |
| GGTGGCACACGCCAAAACTC+GGG | 0.583014 | 4.3:-89058191 | MS.gene34348:CDS |
| CTCTAATGGAACATTGCCGC+AGG | 0.583097 | 4.3:+89057474 | None:intergenic |
| TTCACTTGGAATAGTTGTCG+TGG | 0.586701 | 4.3:-89057834 | MS.gene34348:CDS |
| GGTTCCCCGTGTTTATTCAA+CGG | 0.589761 | 4.3:+89058245 | None:intergenic |
| CTTTGACGACCGGATGCCAG+TGG | 0.590601 | 4.3:-89054792 | MS.gene34348:CDS |
| TGACTTCTTGATGTCACCGC+CGG | 0.591147 | 4.3:+89058493 | None:intergenic |
| GTTATGGGATTCATTGCTGG+AGG | 0.597123 | 4.3:-89057933 | MS.gene34348:CDS |
| TCAATGAAAAGGACAAACTC+AGG | 0.614891 | 4.3:-89058269 | MS.gene34348:CDS |
| GTCACCGCCGGTATAAGGCA+TGG | 0.615654 | 4.3:+89058505 | None:intergenic |
| GGAGCCCCAGATGAATTCAG+CGG | 0.619447 | 4.3:+89058122 | None:intergenic |
| CCATCTCATCAGCTAAGCAA+TGG | 0.621590 | 4.3:-89058590 | MS.gene34348:CDS |
| GTATCATGCAGTTAAAAGAA+GGG | 0.623123 | 4.3:-89054988 | MS.gene34348:intron |
| TTATTCAATGCAGAGACATG+TGG | 0.627545 | 4.3:-89055191 | MS.gene34348:intron |
| CAGGTCCGTTGAATAAACAC+GGG | 0.631654 | 4.3:-89058250 | MS.gene34348:CDS |
| CCAGTTGTTGGAAGAACTGG+AGG | 0.633647 | 4.3:+89058161 | None:intergenic |
| ACCACCTGATTGAGGACCAG+AGG | 0.634928 | 4.3:+89058211 | None:intergenic |
| ACAGTTTGTGAAGGTTTCTG+GGG | 0.638708 | 4.3:-89057745 | MS.gene34348:intron |
| CCAACCATCGAAGGAAATCG+GGG | 0.644123 | 4.3:+89055038 | None:intergenic |
| TCAGGTCCGTTGAATAAACA+CGG | 0.649376 | 4.3:-89058251 | MS.gene34348:CDS |
| AATATCCTGATGCAGAGCTG+AGG | 0.654877 | 4.3:-89057782 | MS.gene34348:CDS |
| CGGATTGACATCAATTACAA+CGG | 0.656746 | 4.3:+89055078 | None:intergenic |
| TGGCCCGCTGAATTCATCTG+GGG | 0.657399 | 4.3:-89058126 | MS.gene34348:CDS |
| GTACATAAAAGAAGGTAGCA+CGG | 0.660164 | 4.3:-89054878 | MS.gene34348:CDS |
| TTTGACGACCGGATGCCAGT+GGG | 0.664024 | 4.3:-89054791 | MS.gene34348:CDS |
| GTTGCCATGCCTTATACCGG+CGG | 0.664295 | 4.3:-89058509 | MS.gene34348:CDS |
| CTGGGGACTTCGTTCAACTG+AGG | 0.664974 | 4.3:-89057347 | MS.gene34348:intron |
| ACTTCCCAAAGCCAATATTG+TGG | 0.667244 | 4.3:-89057974 | MS.gene34348:CDS |
| CAATAAGGAGTATGGCATTG+CGG | 0.670570 | 4.3:+89057892 | None:intergenic |
| CGTGTGCCACCACCTGATTG+AGG | 0.677788 | 4.3:+89058203 | None:intergenic |
| AGCTGTGACTACTCTCAGTG+TGG | 0.690771 | 4.3:-89058021 | MS.gene34348:CDS |
| CAACCATCGAAGGAAATCGG+GGG | 0.713932 | 4.3:+89055039 | None:intergenic |
| AGGTCCGTTGAATAAACACG+GGG | 0.753684 | 4.3:-89058249 | MS.gene34348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTCTTTCAAATAA+AGG | + | chr4.3:89057733-89057752 | None:intergenic | 10.0% |
| !! | AACTTATATACAATGAATTT+GGG | - | chr4.3:89056254-89056273 | MS.gene34348:intron | 15.0% |
| !! | TAACTTATATACAATGAATT+TGG | - | chr4.3:89056253-89056272 | MS.gene34348:intron | 15.0% |
| !! | TCTATCTTATATCTATTAAA+AGG | - | chr4.3:89057662-89057681 | MS.gene34348:intron | 15.0% |
| !!! | ATAATTATTTCTTTCTTGTT+TGG | - | chr4.3:89057608-89057627 | MS.gene34348:intron | 15.0% |
| !!! | CACATTAGTATATTTTAAAT+AGG | - | chr4.3:89057454-89057473 | MS.gene34348:CDS | 15.0% |
| !!! | TAATTATTTCTTTCTTGTTT+GGG | - | chr4.3:89057609-89057628 | MS.gene34348:intron | 15.0% |
| !! | AAAGAATTACTACAACAATA+AGG | + | chr4.3:89055439-89055458 | None:intergenic | 20.0% |
| !! | AAATATATAATTCACATCCA+TGG | + | chr4.3:89056081-89056100 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATGATGTTA+TGG | + | chr4.3:89057654-89057673 | None:intergenic | 20.0% |
| !! | CAAAAGTTAGAATATATCAA+TGG | + | chr4.3:89055809-89055828 | None:intergenic | 20.0% |
| !! | CTGCATTGAATAAAAAATTA+AGG | + | chr4.3:89058115-89058134 | None:intergenic | 20.0% |
| !! | TAGATTATACCATGTAATTA+GGG | + | chr4.3:89056235-89056254 | None:intergenic | 20.0% |
| !! | TTAATTTAATGTGAAGTTTG+AGG | + | chr4.3:89057521-89057540 | None:intergenic | 20.0% |
| !! | TTAGATTATACCATGTAATT+AGG | + | chr4.3:89056236-89056255 | None:intergenic | 20.0% |
| !!! | AATATTTTCTCATTGATTTC+AGG | - | chr4.3:89056357-89056376 | MS.gene34348:intron | 20.0% |
| !!! | ATATTTTCTCATTGATTTCA+GGG | - | chr4.3:89056358-89056377 | MS.gene34348:intron | 20.0% |
| !!! | TATTTTAAATAGGAACAACA+CGG | - | chr4.3:89057464-89057483 | MS.gene34348:CDS | 20.0% |
| !!! | TGATATATTCTAACTTTTGA+AGG | - | chr4.3:89055810-89055829 | MS.gene34348:intron | 20.0% |
| !!! | TTTTCAATGCAACTTATAAA+TGG | + | chr4.3:89056981-89057000 | None:intergenic | 20.0% |
| ! | AAATGAAGTTCTTATGAAAG+TGG | - | chr4.3:89058392-89058411 | MS.gene34348:CDS | 25.0% |
| ! | AAGTTTCAATGCAATGAATT+TGG | + | chr4.3:89056924-89056943 | None:intergenic | 25.0% |
| ! | ACTTAATTTCCCTAATTACA+TGG | - | chr4.3:89056223-89056242 | MS.gene34348:intron | 25.0% |
| ! | ACTTGATTACATATTCTACA+TGG | - | chr4.3:89056324-89056343 | MS.gene34348:intron | 25.0% |
| ! | CCAACAACAATATTTAAACT+AGG | - | chr4.3:89057167-89057186 | MS.gene34348:intron | 25.0% |
| ! | CCTAGTTTAAATATTGTTGT+TGG | + | chr4.3:89057170-89057189 | None:intergenic | 25.0% |
| ! | CTTAATTGGCAGTTAATTAA+GGG | + | chr4.3:89056407-89056426 | None:intergenic | 25.0% |
| ! | CTTGATTACATATTCTACAT+GGG | - | chr4.3:89056325-89056344 | MS.gene34348:intron | 25.0% |
| ! | GAAAATGTTTGATATTCCTA+TGG | - | chr4.3:89054854-89054873 | MS.gene34348:CDS | 25.0% |
| ! | GATTCAAATCTCATTTAATG+TGG | - | chr4.3:89058000-89058019 | MS.gene34348:CDS | 25.0% |
| ! | TCCAATCAATACTTTCATAA+AGG | + | chr4.3:89057982-89058001 | None:intergenic | 25.0% |
| ! | TTCAAATCATGAATGATTGA+TGG | - | chr4.3:89055776-89055795 | MS.gene34348:intron | 25.0% |
| ! | TTTCTTTCAATCTACAGTAA+GGG | + | chr4.3:89057036-89057055 | None:intergenic | 25.0% |
| !! | AATGCAAATTGCATATTTTG+GGG | - | chr4.3:89058043-89058062 | MS.gene34348:CDS | 25.0% |
| !! | AGAATGCAAATTGCATATTT+TGG | - | chr4.3:89058041-89058060 | MS.gene34348:CDS | 25.0% |
| !! | ATACCATCATAGAATTTGTT+TGG | - | chr4.3:89056508-89056527 | MS.gene34348:intron | 25.0% |
| !! | GAATGCAAATTGCATATTTT+GGG | - | chr4.3:89058042-89058061 | MS.gene34348:CDS | 25.0% |
| !! | GTGTCTATGATGTAATTTTA+TGG | + | chr4.3:89056170-89056189 | None:intergenic | 25.0% |
| !! | TACCATCATAGAATTTGTTT+GGG | - | chr4.3:89056509-89056528 | MS.gene34348:intron | 25.0% |
| !! | TTAACACTGTTTCTTCTTTA+GGG | + | chr4.3:89056899-89056918 | None:intergenic | 25.0% |
| !! | TTGCAAGTTTTCAAAAAAGA+TGG | - | chr4.3:89057763-89057782 | MS.gene34348:CDS | 25.0% |
| !! | TTTAACACTGTTTCTTCTTT+AGG | + | chr4.3:89056900-89056919 | None:intergenic | 25.0% |
| !! | TTTTGTAGGTACATAAAAGA+AGG | - | chr4.3:89058427-89058446 | MS.gene34348:CDS | 25.0% |
| !!! | TATATTCTAACTTTTGAAGG+TGG | - | chr4.3:89055813-89055832 | MS.gene34348:intron | 25.0% |
| !!! | TCCTTTATGAAAGTATTGAT+TGG | - | chr4.3:89057978-89057997 | MS.gene34348:CDS | 25.0% |
| AAATACAGTCAAACAATGTG+TGG | + | chr4.3:89055682-89055701 | None:intergenic | 30.0% | |
| AAGTAAGTGCTTATAAAGGT+TGG | + | chr4.3:89056584-89056603 | None:intergenic | 30.0% | |
| ACCTTTATAAGCACTTACTT+AGG | - | chr4.3:89056584-89056603 | MS.gene34348:intron | 30.0% | |
| ACTGGTAAGAGATAATCAAA+AGG | - | chr4.3:89056134-89056153 | MS.gene34348:intron | 30.0% | |
| AGTAAGTGCTTATAAAGGTT+GGG | + | chr4.3:89056583-89056602 | None:intergenic | 30.0% | |
| ATAAAGGCTAGATAGAAACT+AGG | + | chr4.3:89057717-89057736 | None:intergenic | 30.0% | |
| ATCAAGAATAGTCCCTTATT+AGG | - | chr4.3:89057875-89057894 | MS.gene34348:CDS | 30.0% | |
| ATCTCAAAACAATACCTTCA+AGG | + | chr4.3:89058570-89058589 | None:intergenic | 30.0% | |
| ATCTTACAAACCAACTTTGT+AGG | + | chr4.3:89056552-89056571 | None:intergenic | 30.0% | |
| ATGCAACTTATAAATGGTAG+AGG | + | chr4.3:89056975-89056994 | None:intergenic | 30.0% | |
| ATGTTTGATATTCCTATGGA+TGG | - | chr4.3:89054858-89054877 | MS.gene34348:CDS | 30.0% | |
| CATTGAAAACTAAGATTTCC+TGG | - | chr4.3:89056992-89057011 | MS.gene34348:intron | 30.0% | |
| CATTGTCCATACAATTAGTA+AGG | + | chr4.3:89056280-89056299 | None:intergenic | 30.0% | |
| CCTTAATTAACTGCCAATTA+AGG | - | chr4.3:89056405-89056424 | MS.gene34348:intron | 30.0% | |
| CCTTAATTGGCAGTTAATTA+AGG | + | chr4.3:89056408-89056427 | None:intergenic | 30.0% | |
| CTGGTAAGAGATAATCAAAA+GGG | - | chr4.3:89056135-89056154 | MS.gene34348:intron | 30.0% | |
| CTTGTATGAATATAGAGGAT+GGG | - | chr4.3:89055906-89055925 | MS.gene34348:intron | 30.0% | |
| GTATCATGCAGTTAAAAGAA+GGG | - | chr4.3:89058325-89058344 | MS.gene34348:CDS | 30.0% | |
| GTTTCTTTCAATCTACAGTA+AGG | + | chr4.3:89057037-89057056 | None:intergenic | 30.0% | |
| TAAAGGCTAGATAGAAACTA+GGG | + | chr4.3:89057716-89057735 | None:intergenic | 30.0% | |
| TAATTAACTGCCAATTAAGG+CGG | - | chr4.3:89056408-89056427 | MS.gene34348:intron | 30.0% | |
| TACTACAACAATAAGGAGTA+TGG | + | chr4.3:89055432-89055451 | None:intergenic | 30.0% | |
| TCAAGATTCTTTATTCATCC+AGG | + | chr4.3:89057013-89057032 | None:intergenic | 30.0% | |
| TCTATATTCATACAAGCTAG+TGG | + | chr4.3:89055902-89055921 | None:intergenic | 30.0% | |
| TCTTACAAACCAACTTTGTA+GGG | + | chr4.3:89056551-89056570 | None:intergenic | 30.0% | |
| TGCAATTTGCATTCTGATAT+AGG | + | chr4.3:89058036-89058055 | None:intergenic | 30.0% | |
| TGTCGAGTTCAAATAAAACT+TGG | + | chr4.3:89056029-89056048 | None:intergenic | 30.0% | |
| ! | AATGATTTTCCAACACAAGT+GGG | - | chr4.3:89057261-89057280 | MS.gene34348:intron | 30.0% |
| ! | ACATCTTGGAACTTTTTGAA+AGG | + | chr4.3:89055869-89055888 | None:intergenic | 30.0% |
| ! | ACTAGCTTGTATGAATATAG+AGG | - | chr4.3:89055901-89055920 | MS.gene34348:intron | 30.0% |
| ! | ACTTCTTTCTTTCTTTTGAC+GGG | - | chr4.3:89057817-89057836 | MS.gene34348:CDS | 30.0% |
| ! | ATGGACAATGTATCTAGAAT+AGG | - | chr4.3:89056475-89056494 | MS.gene34348:intron | 30.0% |
| ! | ATTTGATTTCATTGACCCTA+AGG | + | chr4.3:89055243-89055262 | None:intergenic | 30.0% |
| ! | CACTTCTTTCTTTCTTTTGA+CGG | - | chr4.3:89057816-89057835 | MS.gene34348:CDS | 30.0% |
| ! | GTATTTTTCTCATTCATCCA+TGG | - | chr4.3:89055696-89055715 | MS.gene34348:intron | 30.0% |
| ! | GTGATTCTCATTTTCGTTAT+GGG | - | chr4.3:89055365-89055384 | MS.gene34348:intron | 30.0% |
| ! | TGTAGTAATTCTTTTTGCTG+CGG | - | chr4.3:89055445-89055464 | MS.gene34348:intron | 30.0% |
| ! | TGTGATTCTCATTTTCGTTA+TGG | - | chr4.3:89055364-89055383 | MS.gene34348:intron | 30.0% |
| ! | TTCATTTTGTGCCAGAAAAT+TGG | + | chr4.3:89057090-89057109 | None:intergenic | 30.0% |
| !! | TCTTCTTTAGGGCTAATAAT+TGG | + | chr4.3:89056888-89056907 | None:intergenic | 30.0% |
| !! | TGTAATTTGCTTATGTGAAC+TGG | - | chr4.3:89056116-89056135 | MS.gene34348:intron | 30.0% |
| !!! | TAAGTTTTTCAGGTGTGTAA+AGG | - | chr4.3:89057290-89057309 | MS.gene34348:intron | 30.0% |
| AACTTTCATCGAAGATGAGA+TGG | - | chr4.3:89057381-89057400 | MS.gene34348:CDS | 35.0% | |
| AGAATCACAGACCACAATAT+TGG | + | chr4.3:89055353-89055372 | None:intergenic | 35.0% | |
| AGCCCAAACAAATTCTATGA+TGG | + | chr4.3:89056514-89056533 | None:intergenic | 35.0% | |
| ATAGCAAACATCAGAATGGT+TGG | - | chr4.3:89056827-89056846 | MS.gene34348:intron | 35.0% | |
| ATATCTTCACTATGTCGTAG+TGG | + | chr4.3:89056780-89056799 | None:intergenic | 35.0% | |
| ATCAAGAAGTCAGGAGAATT+AGG | - | chr4.3:89054831-89054850 | MS.gene34348:CDS | 35.0% | |
| ATTGTTGGAGTCCTTTCTTT+CGG | + | chr4.3:89054777-89054796 | None:intergenic | 35.0% | |
| CACTTGTGTTGGAAAATCAT+TGG | + | chr4.3:89057262-89057281 | None:intergenic | 35.0% | |
| CATATAAGCATCTTCTAACG+CGG | - | chr4.3:89057142-89057161 | MS.gene34348:intron | 35.0% | |
| CCACTTTATGAACTAATCCA+TGG | + | chr4.3:89055716-89055735 | None:intergenic | 35.0% | |
| CGGATTGACATCAATTACAA+CGG | + | chr4.3:89058238-89058257 | None:intergenic | 35.0% | |
| CGTATCATGCAGTTAAAAGA+AGG | - | chr4.3:89058324-89058343 | MS.gene34348:CDS | 35.0% | |
| CGTTGTAATTGATGTCAATC+CGG | - | chr4.3:89058236-89058255 | MS.gene34348:CDS | 35.0% | |
| GATGTAATCAAACCAGTTGT+TGG | + | chr4.3:89055167-89055186 | None:intergenic | 35.0% | |
| GCCTAAGTAAGTGCTTATAA+AGG | + | chr4.3:89056588-89056607 | None:intergenic | 35.0% | |
| GCTTGTATGAATATAGAGGA+TGG | - | chr4.3:89055905-89055924 | MS.gene34348:intron | 35.0% | |
| GGTTCCAAATCTAGAAAATC+TGG | - | chr4.3:89054879-89054898 | MS.gene34348:CDS | 35.0% | |
| GTACATAAAAGAAGGTAGCA+CGG | - | chr4.3:89058435-89058454 | MS.gene34348:CDS | 35.0% | |
| GTGGATGTATATACACATCT+TGG | + | chr4.3:89055883-89055902 | None:intergenic | 35.0% | |
| TATCTTCACTATGTCGTAGT+GGG | + | chr4.3:89056779-89056798 | None:intergenic | 35.0% | |
| TCAAGAAGTCAGGAGAATTA+GGG | - | chr4.3:89054832-89054851 | MS.gene34348:CDS | 35.0% | |
| TCAATGAAAAGGACAAACTC+AGG | - | chr4.3:89055044-89055063 | MS.gene34348:CDS | 35.0% | |
| TCATCTTCGATGAAAGTTCT+TGG | + | chr4.3:89057379-89057398 | None:intergenic | 35.0% | |
| TCCAACACTTTCATTGTTGT+TGG | + | chr4.3:89056652-89056671 | None:intergenic | 35.0% | |
| TGAAGTTCTTATGAAAGTGG+CGG | - | chr4.3:89058395-89058414 | MS.gene34348:CDS | 35.0% | |
| TGACATAGCAAACATCAGAA+TGG | - | chr4.3:89056823-89056842 | MS.gene34348:intron | 35.0% | |
| TGATACGATCATCACTAGAA+AGG | + | chr4.3:89058311-89058330 | None:intergenic | 35.0% | |
| TGGATGATGAATATTCCTTC+AGG | - | chr4.3:89055312-89055331 | MS.gene34348:intron | 35.0% | |
| TTATTCAATGCAGAGACATG+TGG | - | chr4.3:89058122-89058141 | MS.gene34348:CDS | 35.0% | |
| TTTGGGCCTTACTAATTGTA+TGG | - | chr4.3:89056271-89056290 | MS.gene34348:intron | 35.0% | |
| ! | CAATGATTTTCCAACACAAG+TGG | - | chr4.3:89057260-89057279 | MS.gene34348:intron | 35.0% |
| ! | CCAACACTTTCATTGTTGTT+GGG | + | chr4.3:89056651-89056670 | None:intergenic | 35.0% |
| ! | CTTCTTTCTTTCTTTTGACG+GGG | - | chr4.3:89057818-89057837 | MS.gene34348:CDS | 35.0% |
| ! | GAAGGCATACTACCTAATAA+GGG | + | chr4.3:89057890-89057909 | None:intergenic | 35.0% |
| ! | TACACGTTCAACCAATTTTC+TGG | - | chr4.3:89057076-89057095 | MS.gene34348:intron | 35.0% |
| ! | TGAAGGCATACTACCTAATA+AGG | + | chr4.3:89057891-89057910 | None:intergenic | 35.0% |
| ! | TGAAGTTTGAGGCAAAACTT+AGG | + | chr4.3:89057510-89057529 | None:intergenic | 35.0% |
| ! | TGAGTTTGTCCTTTTCATTG+AGG | + | chr4.3:89055045-89055064 | None:intergenic | 35.0% |
| ! | TGGACCAGATTTTCTAGATT+TGG | + | chr4.3:89054886-89054905 | None:intergenic | 35.0% |
| ! | TGGGTTACTTAAGCTTTAGT+GGG | - | chr4.3:89057334-89057353 | MS.gene34348:intron | 35.0% |
| ! | TGTGTAAAGGCATGAAACAA+GGG | - | chr4.3:89057303-89057322 | MS.gene34348:intron | 35.0% |
| ! | TTCTTTCTTTCTTTTGACGG+GGG | - | chr4.3:89057819-89057838 | MS.gene34348:CDS | 35.0% |
| ! | TTGGGTTACTTAAGCTTTAG+TGG | - | chr4.3:89057333-89057352 | MS.gene34348:intron | 35.0% |
| ! | TTTTGACGGGGGATTTATTA+TGG | - | chr4.3:89057830-89057849 | MS.gene34348:CDS | 35.0% |
| !! | AACAACAATGAAAGTGTTGG+AGG | - | chr4.3:89056651-89056670 | MS.gene34348:intron | 35.0% |
| !! | ACAACTGGTTTGATTACATC+TGG | - | chr4.3:89055167-89055186 | MS.gene34348:CDS | 35.0% |
| !! | ATTGCATATTTTGGGGACTT+TGG | - | chr4.3:89058050-89058069 | MS.gene34348:CDS | 35.0% |
| !! | CCATGGATTAGTTCATAAAG+TGG | - | chr4.3:89055713-89055732 | MS.gene34348:intron | 35.0% |
| !! | TCTTGGAACTTTTTGAAAGG+AGG | + | chr4.3:89055866-89055885 | None:intergenic | 35.0% |
| !! | TGTTTGCTATGTCACAATGT+TGG | + | chr4.3:89056817-89056836 | None:intergenic | 35.0% |
| !! | TTTTGAAAGGAGGACTCTAA+TGG | + | chr4.3:89055856-89055875 | None:intergenic | 35.0% |
| !!! | ATTGCTGGAGGTTTTATTCT+TGG | - | chr4.3:89055392-89055411 | MS.gene34348:intron | 35.0% |
| AAACAATGTGTGGCAAGTGT+TGG | + | chr4.3:89055672-89055691 | None:intergenic | 40.0% | |
| AAACCAGTTGTTGGAAGAAC+TGG | + | chr4.3:89055158-89055177 | None:intergenic | 40.0% | |
| AAATGGTAGAGGTGATGAGA+TGG | + | chr4.3:89056964-89056983 | None:intergenic | 40.0% | |
| AAGCAATGGCCTGTATGTAT+CGG | - | chr4.3:89054737-89054756 | MS.gene34348:CDS | 40.0% | |
| AATGGTAGAGGTGATGAGAT+GGG | + | chr4.3:89056963-89056982 | None:intergenic | 40.0% | |
| ACAACGGAATCGTCAACATA+AGG | + | chr4.3:89058222-89058241 | None:intergenic | 40.0% | |
| ACAGTTTGTGAAGGTTTCTG+GGG | - | chr4.3:89055568-89055587 | MS.gene34348:intron | 40.0% | |
| ACTTCCCAAAGCCAATATTG+TGG | - | chr4.3:89055339-89055358 | MS.gene34348:intron | 40.0% | |
| AGATACATTGTCCATGCTTC+CGG | + | chr4.3:89056470-89056489 | None:intergenic | 40.0% | |
| ATGAAACAAGGGGGGATATT+TGG | - | chr4.3:89057314-89057333 | MS.gene34348:intron | 40.0% | |
| ATTGACCCTAAGGACTCTAA+TGG | + | chr4.3:89055233-89055252 | None:intergenic | 40.0% | |
| CAACTTTGTAGGGTTGAGTT+AGG | + | chr4.3:89056541-89056560 | None:intergenic | 40.0% | |
| CAAGAATGGACAGTTTGTGA+AGG | - | chr4.3:89055559-89055578 | MS.gene34348:intron | 40.0% | |
| CATTAAACAACGCTCCTTCA+AGG | - | chr4.3:89054904-89054923 | MS.gene34348:intron | 40.0% | |
| CATTGCTTAGCTGATGAGAT+GGG | + | chr4.3:89054725-89054744 | None:intergenic | 40.0% | |
| CCAATAGTCGATGACTATGA+TGG | + | chr4.3:89057578-89057597 | None:intergenic | 40.0% | |
| CTAACTCAACCCTACAAAGT+TGG | - | chr4.3:89056539-89056558 | MS.gene34348:intron | 40.0% | |
| CTACTTCAGCCTCAATGAAA+AGG | - | chr4.3:89055033-89055052 | MS.gene34348:CDS | 40.0% | |
| CTTACTTAGGCCATATCTCT+AGG | - | chr4.3:89056597-89056616 | MS.gene34348:intron | 40.0% | |
| CTTCACAAACTGTCCATTCT+TGG | + | chr4.3:89055561-89055580 | None:intergenic | 40.0% | |
| GAAAAATACATTTCGCCCAC+TGG | + | chr4.3:89058540-89058559 | None:intergenic | 40.0% | |
| GACAGTTTGTGAAGGTTTCT+GGG | - | chr4.3:89055567-89055586 | MS.gene34348:intron | 40.0% | |
| GATGATGTTATGGTGCAACA+AGG | + | chr4.3:89057644-89057663 | None:intergenic | 40.0% | |
| GTGTTGGATGTGTGTGTATT+TGG | + | chr4.3:89055656-89055675 | None:intergenic | 40.0% | |
| GTTGGAAATTCCGCCTTAAT+TGG | + | chr4.3:89056421-89056440 | None:intergenic | 40.0% | |
| TACATCTCTGACTTCCAATC+TGG | - | chr4.3:89058153-89058172 | MS.gene34348:CDS | 40.0% | |
| TCAGGTCCGTTGAATAAACA+CGG | - | chr4.3:89055062-89055081 | MS.gene34348:CDS | 40.0% | |
| TGAAACAAGGGGGGATATTT+GGG | - | chr4.3:89057315-89057334 | MS.gene34348:intron | 40.0% | |
| TGCCATAACATCAGACATGA+AGG | + | chr4.3:89057908-89057927 | None:intergenic | 40.0% | |
| TGCCTTCATGTCTGATGTTA+TGG | - | chr4.3:89057903-89057922 | MS.gene34348:CDS | 40.0% | |
| TGCGACTGCTTGAAATACTT+TGG | - | chr4.3:89056055-89056074 | MS.gene34348:intron | 40.0% | |
| TGCTTGAAATACTTTGGCCA+TGG | - | chr4.3:89056061-89056080 | MS.gene34348:intron | 40.0% | |
| TTCACTTGGAATAGTTGTCG+TGG | - | chr4.3:89055479-89055498 | MS.gene34348:intron | 40.0% | |
| TTCGTTATGGGATTCATTGC+TGG | - | chr4.3:89055377-89055396 | MS.gene34348:intron | 40.0% | |
| ! | AGTAATTCTTTTTGCTGCGG+TGG | - | chr4.3:89055448-89055467 | MS.gene34348:intron | 40.0% |
| ! | CAATAAGGAGTATGGCATTG+CGG | + | chr4.3:89055424-89055443 | None:intergenic | 40.0% |
| ! | CCATCATAGTCATCGACTAT+TGG | - | chr4.3:89057575-89057594 | MS.gene34348:intron | 40.0% |
| ! | CCCAACAACAATGAAAGTGT+TGG | - | chr4.3:89056648-89056667 | MS.gene34348:intron | 40.0% |
| ! | CTAGATTTGGAACCATCCAT+AGG | + | chr4.3:89054873-89054892 | None:intergenic | 40.0% |
| ! | GGGTTACTTAAGCTTTAGTG+GGG | - | chr4.3:89057335-89057354 | MS.gene34348:intron | 40.0% |
| ! | GTGTAAAGGCATGAAACAAG+GGG | - | chr4.3:89057304-89057323 | MS.gene34348:intron | 40.0% |
| ! | GTGTGTAAAGGCATGAAACA+AGG | - | chr4.3:89057302-89057321 | MS.gene34348:intron | 40.0% |
| ! | TAAAACAGGCTTTGGTGCAA+GGG | - | chr4.3:89058191-89058210 | MS.gene34348:CDS | 40.0% |
| ! | TGGGATCAGCTAAGTTTTTC+AGG | - | chr4.3:89057280-89057299 | MS.gene34348:intron | 40.0% |
| ! | TGTAAAGGCATGAAACAAGG+GGG | - | chr4.3:89057305-89057324 | MS.gene34348:intron | 40.0% |
| ! | TTAAAACAGGCTTTGGTGCA+AGG | - | chr4.3:89058190-89058209 | MS.gene34348:CDS | 40.0% |
| ! | TTTCATTGTTGTTGGGTGCA+GGG | + | chr4.3:89056644-89056663 | None:intergenic | 40.0% |
| !! | ACAGACCACAATATTGGCTT+TGG | + | chr4.3:89055347-89055366 | None:intergenic | 40.0% |
| !! | CAGACCACAATATTGGCTTT+GGG | + | chr4.3:89055346-89055365 | None:intergenic | 40.0% |
| !! | CTGAGAGCATTGGTTAAAAC+AGG | - | chr4.3:89058177-89058196 | MS.gene34348:CDS | 40.0% |
| !! | CTTGAAGGAGCGTTGTTTAA+TGG | + | chr4.3:89054906-89054925 | None:intergenic | 40.0% |
| !! | GCATTGGTTAAAACAGGCTT+TGG | - | chr4.3:89058183-89058202 | MS.gene34348:CDS | 40.0% |
| !! | TAAACATCGCCGTTTTACCT+GGG | - | chr4.3:89055948-89055967 | MS.gene34348:intron | 40.0% |
| !!! | ATTTTTCCAGCTAGCCTTGA+AGG | - | chr4.3:89058553-89058572 | MS.gene34348:CDS | 40.0% |
| !!! | CTGTTTTAACCAATGCTCTC+AGG | + | chr4.3:89058179-89058198 | None:intergenic | 40.0% |
| AACGAAGTCCCCAGGTAAAA+CGG | + | chr4.3:89055960-89055979 | None:intergenic | 45.0% | |
| AATATCCTGATGCAGAGCTG+AGG | - | chr4.3:89055531-89055550 | MS.gene34348:intron | 45.0% | |
| AATGGACCAGAAACCTTCCT+TGG | + | chr4.3:89055215-89055234 | None:intergenic | 45.0% | |
| ACAATACCTTCAAGGCTAGC+TGG | + | chr4.3:89058562-89058581 | None:intergenic | 45.0% | |
| AGCAATGGCCTGTATGTATC+GGG | - | chr4.3:89054738-89054757 | MS.gene34348:CDS | 45.0% | |
| AGGTCCGTTGAATAAACACG+GGG | - | chr4.3:89055064-89055083 | MS.gene34348:CDS | 45.0% | |
| ATGGCAACTGAGCTCATTGT+TGG | + | chr4.3:89054792-89054811 | None:intergenic | 45.0% | |
| CAGGTCCGTTGAATAAACAC+GGG | - | chr4.3:89055063-89055082 | MS.gene34348:CDS | 45.0% | |
| CCATCTCATCAGCTAAGCAA+TGG | - | chr4.3:89054723-89054742 | MS.gene34348:CDS | 45.0% | |
| CCATTGCTTAGCTGATGAGA+TGG | + | chr4.3:89054726-89054745 | None:intergenic | 45.0% | |
| CGTGGAAGGAAAGCTATTGT+TGG | - | chr4.3:89055497-89055516 | MS.gene34348:intron | 45.0% | |
| CTGGTCCATTAGAGTCCTTA+GGG | - | chr4.3:89055225-89055244 | MS.gene34348:intron | 45.0% | |
| CTTGGAATAGTTGTCGTGGA+AGG | - | chr4.3:89055483-89055502 | MS.gene34348:intron | 45.0% | |
| GCCATATCTCTAGGCAATGT+GGG | - | chr4.3:89056606-89056625 | MS.gene34348:intron | 45.0% | |
| GGACAGTTTGTGAAGGTTTC+TGG | - | chr4.3:89055566-89055585 | MS.gene34348:intron | 45.0% | |
| GGGGACATGTCTTTATTCTC+CGG | + | chr4.3:89058258-89058277 | None:intergenic | 45.0% | |
| GGTTCCCCGTGTTTATTCAA+CGG | + | chr4.3:89055071-89055090 | None:intergenic | 45.0% | |
| GTTATGGGATTCATTGCTGG+AGG | - | chr4.3:89055380-89055399 | MS.gene34348:intron | 45.0% | |
| GTTGAATAAACACGGGGAAC+CGG | - | chr4.3:89055070-89055089 | MS.gene34348:CDS | 45.0% | |
| TCAGGTAATCTATCTGCTGC+AGG | - | chr4.3:89055005-89055024 | MS.gene34348:CDS | 45.0% | |
| TCAGTTGCCATGCCTTATAC+CGG | - | chr4.3:89054801-89054820 | MS.gene34348:CDS | 45.0% | |
| TCATCGAAGATGAGATGGAG+TGG | - | chr4.3:89057386-89057405 | MS.gene34348:CDS | 45.0% | |
| TCCCACATTGCCTAGAGATA+TGG | + | chr4.3:89056610-89056629 | None:intergenic | 45.0% | |
| TCTGGTCCATTAGAGTCCTT+AGG | - | chr4.3:89055224-89055243 | MS.gene34348:intron | 45.0% | |
| TGACGGGGGATTTATTATGG+TGG | - | chr4.3:89057833-89057852 | MS.gene34348:CDS | 45.0% | |
| TTAGCTGATCCCACTTGTGT+TGG | + | chr4.3:89057273-89057292 | None:intergenic | 45.0% | |
| TTTCTTTCGGCTGTTCAGGA+CGG | + | chr4.3:89054764-89054783 | None:intergenic | 45.0% | |
| ! | AACTAGGAGTGTGAGACAGA+TGG | - | chr4.3:89057183-89057202 | MS.gene34348:intron | 45.0% |
| ! | AATTCTTTTTGCTGCGGTGG+CGG | - | chr4.3:89055451-89055470 | MS.gene34348:intron | 45.0% |
| ! | ACTAGGAGTGTGAGACAGAT+GGG | - | chr4.3:89057184-89057203 | MS.gene34348:intron | 45.0% |
| ! | CTTTCATTGTTGTTGGGTGC+AGG | + | chr4.3:89056645-89056664 | None:intergenic | 45.0% |
| ! | CTTTGGGAAGTTCTTCCTGA+AGG | + | chr4.3:89055330-89055349 | None:intergenic | 45.0% |
| ! | GCTGCTGCGTTTTGCATAAT+AGG | + | chr4.3:89054966-89054985 | None:intergenic | 45.0% |
| ! | GTAAAGGCATGAAACAAGGG+GGG | - | chr4.3:89057306-89057325 | MS.gene34348:intron | 45.0% |
| ! | GTTGGAAGAACTGGAGGTAT+TGG | + | chr4.3:89055149-89055168 | None:intergenic | 45.0% |
| ! | TTCATTGTTGTTGGGTGCAG+GGG | + | chr4.3:89056643-89056662 | None:intergenic | 45.0% |
| !! | AAACATCGCCGTTTTACCTG+GGG | - | chr4.3:89055949-89055968 | MS.gene34348:intron | 45.0% |
| !! | CATATTTTGGGGACTTTGGC+AGG | - | chr4.3:89058054-89058073 | MS.gene34348:CDS | 45.0% |
| !! | CTAAACATCGCCGTTTTACC+TGG | - | chr4.3:89055947-89055966 | MS.gene34348:intron | 45.0% |
| !! | CTTTTGAAGGTGGTAACCTG+CGG | - | chr4.3:89055823-89055842 | MS.gene34348:intron | 45.0% |
| !! | GGCGGCTATGATGTTTTTGT+AGG | - | chr4.3:89058413-89058432 | MS.gene34348:CDS | 45.0% |
| AACAACGCTCCTTCAAGGAC+TGG | - | chr4.3:89054909-89054928 | MS.gene34348:intron | 50.0% | |
| AAGTCCTCTGGTCCTCAATC+AGG | - | chr4.3:89055098-89055117 | MS.gene34348:CDS | 50.0% | |
| ACACTGAGAGTAGTCACAGC+TGG | + | chr4.3:89055293-89055312 | None:intergenic | 50.0% | |
| AGACAGATGGGAGAGTCATC+TGG | - | chr4.3:89057196-89057215 | MS.gene34348:intron | 50.0% | |
| AGCTGTGACTACTCTCAGTG+TGG | - | chr4.3:89055292-89055311 | MS.gene34348:intron | 50.0% | |
| AGGTAGCACGGTTAGCGTAA+TGG | - | chr4.3:89058447-89058466 | MS.gene34348:CDS | 50.0% | |
| ATGAGATGGAGTGGTTGCAG+AGG | - | chr4.3:89057395-89057414 | MS.gene34348:CDS | 50.0% | |
| CAACCATCGAAGGAAATCGG+GGG | + | chr4.3:89058277-89058296 | None:intergenic | 50.0% | |
| CCAACCATCGAAGGAAATCG+GGG | + | chr4.3:89058278-89058297 | None:intergenic | 50.0% | |
| CCAGTTGTTGGAAGAACTGG+AGG | + | chr4.3:89055155-89055174 | None:intergenic | 50.0% | |
| CCCAACCATCGAAGGAAATC+GGG | + | chr4.3:89058279-89058298 | None:intergenic | 50.0% | |
| CCCCAACCATCGAAGGAAAT+CGG | + | chr4.3:89058280-89058299 | None:intergenic | 50.0% | |
| CCCGATTTCCTTCGATGGTT+GGG | - | chr4.3:89058276-89058295 | MS.gene34348:CDS | 50.0% | |
| CCGATTTCCTTCGATGGTTG+GGG | - | chr4.3:89058277-89058296 | MS.gene34348:CDS | 50.0% | |
| CCTCCAGTTCTTCCAACAAC+TGG | - | chr4.3:89055152-89055171 | MS.gene34348:CDS | 50.0% | |
| CGTTCGGCTTATGTCACATC+AGG | - | chr4.3:89054987-89055006 | MS.gene34348:intron | 50.0% | |
| CTCTAATGGAACATTGCCGC+AGG | + | chr4.3:89055842-89055861 | None:intergenic | 50.0% | |
| GAACCGGTTAAGAAGTCCTC+TGG | - | chr4.3:89055086-89055105 | MS.gene34348:CDS | 50.0% | |
| GAAGCCAGGAAACTCGAATC+TGG | - | chr4.3:89056860-89056879 | MS.gene34348:intron | 50.0% | |
| GCAAACGATCCAGTCCTTGA+AGG | + | chr4.3:89054921-89054940 | None:intergenic | 50.0% | |
| GGACCAGAGGACTTCTTAAC+CGG | + | chr4.3:89055092-89055111 | None:intergenic | 50.0% | |
| GGCCATATCTCTAGGCAATG+TGG | - | chr4.3:89056605-89056624 | MS.gene34348:intron | 50.0% | |
| GGTAGCACGGTTAGCGTAAT+GGG | - | chr4.3:89058448-89058467 | MS.gene34348:CDS | 50.0% | |
| GTCCTGAACAGCCGAAAGAA+AGG | - | chr4.3:89054763-89054782 | MS.gene34348:CDS | 50.0% | |
| GTCCTTTCTTTCGGCTGTTC+AGG | + | chr4.3:89054768-89054787 | None:intergenic | 50.0% | |
| TCAAGGACTGGATCGTTTGC+AGG | - | chr4.3:89054921-89054940 | MS.gene34348:intron | 50.0% | |
| TGACTTCTTGATGTCACCGC+CGG | + | chr4.3:89054823-89054842 | None:intergenic | 50.0% | |
| TGAGATGGAGTGGTTGCAGA+GGG | - | chr4.3:89057396-89057415 | MS.gene34348:CDS | 50.0% | |
| TTCTCTTCCCCAACCATCGA+AGG | + | chr4.3:89058287-89058306 | None:intergenic | 50.0% | |
| TTGATGTCACCGCCGGTATA+AGG | + | chr4.3:89054816-89054835 | None:intergenic | 50.0% | |
| TTGGAGAGCTTGTAGAAGCC+AGG | - | chr4.3:89056846-89056865 | MS.gene34348:intron | 50.0% | |
| ! | AAGCTTTAGTGGGGTCAGAC+TGG | - | chr4.3:89057344-89057363 | MS.gene34348:intron | 50.0% |
| ! | TCATTGTTGTTGGGTGCAGG+GGG | + | chr4.3:89056642-89056661 | None:intergenic | 50.0% |
| ! | TGAATTCATCTGGGGCTCCA+AGG | - | chr4.3:89055195-89055214 | MS.gene34348:intron | 50.0% |
| !!! | GAGGTATTGGACCCGAGTTT+TGG | + | chr4.3:89055136-89055155 | None:intergenic | 50.0% |
| ACATTTCGCCCACTGGCATC+CGG | + | chr4.3:89058533-89058552 | None:intergenic | 55.0% | |
| ACCACCTGATTGAGGACCAG+AGG | + | chr4.3:89055105-89055124 | None:intergenic | 55.0% | |
| CAACGAAGGCAGCTCAAGTG+TGG | - | chr4.3:89056677-89056696 | MS.gene34348:intron | 55.0% | |
| CCAATGCTCTCAGGCCAGAT+TGG | + | chr4.3:89058170-89058189 | None:intergenic | 55.0% | |
| CCCCGATTTCCTTCGATGGT+TGG | - | chr4.3:89058275-89058294 | MS.gene34348:CDS | 55.0% | |
| CCCTCATGACCAAACCCGAT+GGG | - | chr4.3:89056444-89056463 | MS.gene34348:intron | 55.0% | |
| CTCAGTTGAACGAAGTCCCC+AGG | + | chr4.3:89055968-89055987 | None:intergenic | 55.0% | |
| CTGGCCCGCTGAATTCATCT+GGG | - | chr4.3:89055186-89055205 | MS.gene34348:intron | 55.0% | |
| CTGGGGACTTCGTTCAACTG+AGG | - | chr4.3:89055966-89055985 | MS.gene34348:intron | 55.0% | |
| GAGATGGAGTGGTTGCAGAG+GGG | - | chr4.3:89057397-89057416 | MS.gene34348:CDS | 55.0% | |
| GAGCCCCAGATGAATTCAGC+GGG | + | chr4.3:89055193-89055212 | None:intergenic | 55.0% | |
| GAGCTGAGGACAGCCAAGAA+TGG | - | chr4.3:89055545-89055564 | MS.gene34348:intron | 55.0% | |
| GCAAAACGCAGCAGCTCGTT+CGG | - | chr4.3:89054971-89054990 | MS.gene34348:intron | 55.0% | |
| GGAGCCCCAGATGAATTCAG+CGG | + | chr4.3:89055194-89055213 | None:intergenic | 55.0% | |
| GGCGGTGACATCAAGAAGTC+AGG | - | chr4.3:89054822-89054841 | MS.gene34348:CDS | 55.0% | |
| GTTGCCATGCCTTATACCGG+CGG | - | chr4.3:89054804-89054823 | MS.gene34348:CDS | 55.0% | |
| TCCTCTGGTCCTCAATCAGG+TGG | - | chr4.3:89055101-89055120 | MS.gene34348:CDS | 55.0% | |
| TCTGGCCCGCTGAATTCATC+TGG | - | chr4.3:89055185-89055204 | MS.gene34348:intron | 55.0% | |
| TCTGGTCCTCAATCAGGTGG+TGG | - | chr4.3:89055104-89055123 | MS.gene34348:CDS | 55.0% | |
| TGGCCCGCTGAATTCATCTG+GGG | - | chr4.3:89055187-89055206 | MS.gene34348:intron | 55.0% | |
| TGGTGGCACACGCCAAAACT+CGG | - | chr4.3:89055121-89055140 | MS.gene34348:CDS | 55.0% | |
| TGTCCCCCGATTTCCTTCGA+TGG | - | chr4.3:89058271-89058290 | MS.gene34348:CDS | 55.0% | |
| TTTGACGACCGGATGCCAGT+GGG | - | chr4.3:89058522-89058541 | MS.gene34348:CDS | 55.0% | |
| ! | AGTGTTGGAGGCTGCAACGA+AGG | - | chr4.3:89056663-89056682 | MS.gene34348:intron | 55.0% |
| ! | ATCGGGTTTGGTCATGAGGG+GGG | + | chr4.3:89056444-89056463 | None:intergenic | 55.0% |
| ! | CATCGGGTTTGGTCATGAGG+GGG | + | chr4.3:89056445-89056464 | None:intergenic | 55.0% |
| ! | CCAATCTGGCCTGAGAGCAT+TGG | - | chr4.3:89058167-89058186 | MS.gene34348:CDS | 55.0% |
| ! | CCATCGGGTTTGGTCATGAG+GGG | + | chr4.3:89056446-89056465 | None:intergenic | 55.0% |
| ! | CCCATCGGGTTTGGTCATGA+GGG | + | chr4.3:89056447-89056466 | None:intergenic | 55.0% |
| ! | CGGTGGCGGCATTATTCACT+TGG | - | chr4.3:89055465-89055484 | MS.gene34348:intron | 55.0% |
| ! | GGCACCAGATTCGAGTTTCC+TGG | + | chr4.3:89056867-89056886 | None:intergenic | 55.0% |
| ! | TTCATCTGGGGCTCCAAGGA+AGG | - | chr4.3:89055199-89055218 | MS.gene34348:intron | 55.0% |
| CACTGGCATCCGGTCGTCAA+AGG | + | chr4.3:89058523-89058542 | None:intergenic | 60.0% | |
| CAGGACGGCCCGATACATAC+AGG | + | chr4.3:89054749-89054768 | None:intergenic | 60.0% | |
| CATCCGGTCGTCAAAGGCTC+AGG | + | chr4.3:89058517-89058536 | None:intergenic | 60.0% | |
| CATGACCAAACCCGATGGGC+CGG | - | chr4.3:89056448-89056467 | MS.gene34348:intron | 60.0% | |
| CCCCTCATGACCAAACCCGA+TGG | - | chr4.3:89056443-89056462 | MS.gene34348:intron | 60.0% | |
| CCTCCTGAGCCTTTGACGAC+CGG | - | chr4.3:89058511-89058530 | MS.gene34348:CDS | 60.0% | |
| CGTGTGCCACCACCTGATTG+AGG | + | chr4.3:89055113-89055132 | None:intergenic | 60.0% | |
| CTTTGACGACCGGATGCCAG+TGG | - | chr4.3:89058521-89058540 | MS.gene34348:CDS | 60.0% | |
| GCTGTCCTCAGCTCTGCATC+AGG | + | chr4.3:89055539-89055558 | None:intergenic | 60.0% | |
| GGGGCTCCAAGGAAGGTTTC+TGG | - | chr4.3:89055206-89055225 | MS.gene34348:intron | 60.0% | |
| GGTGGCACACGCCAAAACTC+GGG | - | chr4.3:89055122-89055141 | MS.gene34348:CDS | 60.0% | |
| GTCACCGCCGGTATAAGGCA+TGG | + | chr4.3:89054811-89054830 | None:intergenic | 60.0% | |
| GTCGTCAAAGGCTCAGGAGG+AGG | + | chr4.3:89058511-89058530 | None:intergenic | 60.0% | |
| GTTTGGTCATGAGGGGGGGT+TGG | + | chr4.3:89056439-89056458 | None:intergenic | 60.0% | |
| TGTCCATGCTTCCGGCCCAT+CGG | + | chr4.3:89056462-89056481 | None:intergenic | 60.0% | |
| TGTTGTTGGGTGCAGGGGGT+GGG | + | chr4.3:89056638-89056657 | None:intergenic | 60.0% | |
| ! | GCCCATCGGGTTTGGTCATG+AGG | + | chr4.3:89056448-89056467 | None:intergenic | 60.0% |
| ! | TCGGGTTTGGTCATGAGGGG+GGG | + | chr4.3:89056443-89056462 | None:intergenic | 60.0% |
| ! | TTGTTGTTGGGTGCAGGGGG+TGG | + | chr4.3:89056639-89056658 | None:intergenic | 60.0% |
| !! | AGTGGGGTCAGACTGGTCTC+AGG | - | chr4.3:89057351-89057370 | MS.gene34348:CDS | 60.0% |
| AACCCGATGGGCCGGAAGCA+TGG | - | chr4.3:89056456-89056475 | MS.gene34348:intron | 65.0% | |
| CCGGTCGTCAAAGGCTCAGG+AGG | + | chr4.3:89058514-89058533 | None:intergenic | 65.0% | |
| GTCCATGCTTCCGGCCCATC+GGG | + | chr4.3:89056461-89056480 | None:intergenic | 65.0% | |
| TGCTTCCGGCCCATCGGGTT+TGG | + | chr4.3:89056456-89056475 | None:intergenic | 65.0% | |
| ! | GCAGGCGCTGCTTCGCACTC+TGG | - | chr4.3:89054939-89054958 | MS.gene34348:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 89054708 | 89058627 | 89054708 | ID=MS.gene34348 |
| chr4.3 | mRNA | 89054708 | 89058627 | 89054708 | ID=MS.gene34348.t1;Parent=MS.gene34348 |
| chr4.3 | exon | 89057746 | 89058627 | 89057746 | ID=MS.gene34348.t1.exon1;Parent=MS.gene34348.t1 |
| chr4.3 | CDS | 89057746 | 89058627 | 89057746 | ID=cds.MS.gene34348.t1;Parent=MS.gene34348.t1 |
| chr4.3 | exon | 89057348 | 89057503 | 89057348 | ID=MS.gene34348.t1.exon2;Parent=MS.gene34348.t1 |
| chr4.3 | CDS | 89057348 | 89057503 | 89057348 | ID=cds.MS.gene34348.t1;Parent=MS.gene34348.t1 |
| chr4.3 | exon | 89054989 | 89055200 | 89054989 | ID=MS.gene34348.t1.exon3;Parent=MS.gene34348.t1 |
| chr4.3 | CDS | 89054989 | 89055200 | 89054989 | ID=cds.MS.gene34348.t1;Parent=MS.gene34348.t1 |
| chr4.3 | exon | 89054708 | 89054900 | 89054708 | ID=MS.gene34348.t1.exon4;Parent=MS.gene34348.t1 |
| chr4.3 | CDS | 89054708 | 89054900 | 89054708 | ID=cds.MS.gene34348.t1;Parent=MS.gene34348.t1 |
| Gene Sequence |
| Protein sequence |
