Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35129.t1 | XP_013457326.1 | 89 | 318 | 35 | 0 | 1 | 318 | 1 | 318 | 6.90E-158 | 567.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35129.t1 | Q7DNC3 | 67.7 | 288 | 87 | 2 | 24 | 311 | 17 | 298 | 2.7e-110 | 400.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35129.t1 | A0A072UNZ1 | 89.0 | 318 | 35 | 0 | 1 | 318 | 1 | 318 | 5.0e-158 | 567.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene060122 | MS.gene35129 | 0.821826 | 3.28E-53 | -1.69E-46 |
MS.gene060125 | MS.gene35129 | 0.812311 | 4.52E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35129.t1 | MTR_4g094578 | 92.453 | 318 | 24 | 0 | 1 | 318 | 1 | 318 | 0.0 | 590 |
MS.gene35129.t1 | MTR_5g024770 | 56.766 | 303 | 107 | 3 | 24 | 326 | 16 | 294 | 2.54e-116 | 345 |
MS.gene35129.t1 | MTR_6g033280 | 43.945 | 289 | 160 | 1 | 23 | 311 | 57 | 343 | 1.83e-86 | 271 |
MS.gene35129.t1 | MTR_8g099910 | 44.483 | 290 | 155 | 4 | 23 | 310 | 67 | 352 | 2.42e-84 | 265 |
MS.gene35129.t1 | MTR_7g083790 | 42.857 | 287 | 162 | 1 | 24 | 310 | 77 | 361 | 7.34e-84 | 265 |
MS.gene35129.t1 | MTR_4g094580 | 98.438 | 128 | 0 | 1 | 396 | 521 | 2 | 129 | 1.62e-80 | 247 |
MS.gene35129.t1 | MTR_5g073040 | 26.578 | 301 | 196 | 7 | 13 | 300 | 23 | 311 | 9.17e-18 | 84.7 |
MS.gene35129.t1 | MTR_4g018750 | 25.632 | 277 | 171 | 7 | 25 | 279 | 11 | 274 | 5.98e-16 | 79.0 |
MS.gene35129.t1 | MTR_7g066690 | 25.448 | 279 | 169 | 8 | 27 | 279 | 11 | 276 | 2.03e-15 | 77.4 |
MS.gene35129.t1 | MTR_4g018750 | 25.660 | 265 | 162 | 7 | 25 | 267 | 11 | 262 | 7.55e-15 | 75.5 |
MS.gene35129.t1 | MTR_5g009500 | 22.189 | 338 | 211 | 11 | 4 | 305 | 19 | 340 | 2.61e-14 | 74.7 |
MS.gene35129.t1 | MTR_8g027975 | 21.472 | 326 | 210 | 10 | 18 | 305 | 38 | 355 | 6.30e-14 | 73.6 |
MS.gene35129.t1 | MTR_4g057850 | 26.990 | 289 | 180 | 11 | 30 | 299 | 23 | 299 | 6.76e-14 | 73.2 |
MS.gene35129.t1 | MTR_7g064980 | 25.543 | 184 | 121 | 4 | 27 | 201 | 132 | 308 | 2.54e-13 | 71.2 |
MS.gene35129.t1 | MTR_7g084400 | 24.823 | 282 | 190 | 9 | 29 | 300 | 213 | 482 | 1.53e-12 | 70.1 |
MS.gene35129.t1 | MTR_1g090330 | 23.860 | 285 | 178 | 9 | 45 | 305 | 30 | 299 | 2.74e-12 | 68.2 |
MS.gene35129.t1 | MTR_7g109135 | 29.651 | 172 | 108 | 5 | 39 | 201 | 133 | 300 | 3.87e-12 | 67.8 |
MS.gene35129.t1 | MTR_5g055410 | 28.824 | 170 | 109 | 4 | 42 | 201 | 132 | 299 | 5.43e-12 | 67.8 |
MS.gene35129.t1 | MTR_7g109135 | 30.714 | 140 | 91 | 3 | 66 | 201 | 156 | 293 | 2.84e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35129.t1 | AT2G17270 | 66.113 | 301 | 87 | 4 | 19 | 311 | 5 | 298 | 3.29e-143 | 414 |
MS.gene35129.t1 | AT3G48850 | 47.038 | 287 | 150 | 1 | 24 | 310 | 66 | 350 | 1.39e-91 | 284 |
MS.gene35129.t1 | AT5G14040 | 43.750 | 288 | 160 | 1 | 24 | 311 | 77 | 362 | 5.54e-86 | 270 |
MS.gene35129.t1 | AT1G29850 | 81.538 | 130 | 18 | 2 | 396 | 521 | 2 | 129 | 5.75e-64 | 204 |
MS.gene35129.t1 | AT1G29850 | 80.916 | 131 | 18 | 2 | 396 | 521 | 2 | 130 | 7.67e-64 | 204 |
MS.gene35129.t1 | AT1G29850 | 80.556 | 108 | 17 | 1 | 408 | 511 | 1 | 108 | 8.40e-52 | 173 |
MS.gene35129.t1 | AT1G07030 | 27.368 | 285 | 181 | 8 | 30 | 300 | 41 | 313 | 6.48e-18 | 85.5 |
MS.gene35129.t1 | AT2G30160 | 25.552 | 317 | 205 | 9 | 6 | 300 | 11 | 318 | 1.59e-16 | 81.3 |
MS.gene35129.t1 | AT5G58970 | 26.740 | 273 | 165 | 7 | 29 | 279 | 16 | 275 | 2.81e-15 | 77.0 |
MS.gene35129.t1 | AT3G53940 | 26.630 | 184 | 119 | 4 | 27 | 201 | 178 | 354 | 2.44e-14 | 75.1 |
MS.gene35129.t1 | AT3G54110 | 24.231 | 260 | 166 | 6 | 40 | 279 | 26 | 274 | 3.32e-14 | 73.9 |
MS.gene35129.t1 | AT4G01100 | 25.123 | 203 | 127 | 4 | 26 | 207 | 96 | 294 | 3.65e-14 | 73.9 |
MS.gene35129.t1 | AT4G01100 | 23.000 | 300 | 187 | 9 | 42 | 305 | 5 | 296 | 7.39e-12 | 67.0 |
MS.gene35129.t1 | AT4G01100 | 23.220 | 323 | 200 | 11 | 22 | 305 | 33 | 346 | 5.38e-14 | 73.9 |
MS.gene35129.t1 | AT4G01100 | 25.381 | 197 | 122 | 4 | 32 | 207 | 166 | 358 | 1.01e-13 | 73.2 |
MS.gene35129.t1 | AT4G01100 | 22.823 | 333 | 203 | 12 | 22 | 305 | 33 | 360 | 1.92e-13 | 72.4 |
MS.gene35129.t1 | AT5G58970 | 28.151 | 238 | 141 | 6 | 29 | 249 | 16 | 240 | 1.54e-13 | 71.6 |
MS.gene35129.t1 | AT5G01340 | 26.087 | 299 | 186 | 13 | 30 | 308 | 18 | 301 | 9.23e-13 | 69.7 |
MS.gene35129.t1 | AT5G61810 | 23.944 | 284 | 185 | 9 | 29 | 300 | 208 | 472 | 2.21e-12 | 69.7 |
MS.gene35129.t1 | AT5G61810 | 23.592 | 284 | 186 | 9 | 29 | 300 | 65 | 329 | 2.72e-12 | 68.6 |
MS.gene35129.t1 | AT3G51870 | 25.368 | 272 | 170 | 9 | 45 | 302 | 107 | 359 | 2.78e-12 | 68.9 |
MS.gene35129.t1 | AT4G03115 | 26.866 | 201 | 126 | 7 | 16 | 210 | 29 | 214 | 4.25e-12 | 66.2 |
MS.gene35129.t1 | AT2G37890 | 25.683 | 183 | 122 | 3 | 27 | 201 | 150 | 326 | 5.50e-12 | 67.8 |
MS.gene35129.t1 | AT4G03115 | 26.866 | 201 | 126 | 7 | 16 | 210 | 29 | 214 | 6.82e-12 | 65.9 |
MS.gene35129.t1 | AT1G25380 | 26.163 | 172 | 116 | 4 | 39 | 201 | 131 | 300 | 9.25e-12 | 67.0 |
MS.gene35129.t1 | AT1G25380 | 26.163 | 172 | 116 | 4 | 39 | 201 | 131 | 300 | 9.25e-12 | 67.0 |
MS.gene35129.t1 | AT5G07320 | 24.265 | 272 | 173 | 9 | 42 | 300 | 222 | 473 | 3.08e-11 | 66.2 |
MS.gene35129.t1 | AT4G26180 | 24.749 | 299 | 187 | 11 | 29 | 301 | 21 | 307 | 7.29e-11 | 63.9 |
Find 116 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTATTCGCATTGCACTTCT+AGG | 0.169803 | 4.4:-19637926 | MS.gene35129:CDS |
TCCTGGGCACTCTGTTGTTC+AGG | 0.184238 | 4.4:+19633452 | None:intergenic |
ATGGGTTGATTAAGCTTAAT+AGG | 0.252810 | 4.4:-19640215 | MS.gene35129:CDS |
ACTAAACCCTTAGCAAAATT+AGG | 0.268377 | 4.4:+19640096 | None:intergenic |
AAACCAAACGGTGGTATTAA+AGG | 0.272206 | 4.4:+19636098 | None:intergenic |
GAGAAGGATGCAGGAGCTTA+TGG | 0.276747 | 4.4:-19633601 | MS.gene35129:CDS |
AGGAAGGTTCTTATGCTCTT+TGG | 0.276947 | 4.4:-19640338 | MS.gene35129:CDS |
TTCAACAGAATTCAAATGTC+TGG | 0.287778 | 4.4:-19636511 | MS.gene35129:intron |
TGTCTGGGGTGTTTAGTATT+AGG | 0.287894 | 4.4:-19636495 | MS.gene35129:CDS |
TATTACGGAGTTTGCTTTAT+CGG | 0.292082 | 4.4:-19640492 | MS.gene35129:CDS |
CCTGGGCACTCTGTTGTTCA+GGG | 0.335041 | 4.4:+19633453 | None:intergenic |
CTAACCTCTTTGCATCTTCC+TGG | 0.348654 | 4.4:+19633435 | None:intergenic |
GCACTCTGTTGTTCAGGGTT+TGG | 0.349627 | 4.4:+19633458 | None:intergenic |
GACACTATAAAAGTGCTATC+TGG | 0.354014 | 4.4:-19637872 | MS.gene35129:CDS |
CTTATGCTCTTTGGAGAGGC+TGG | 0.373010 | 4.4:-19640329 | MS.gene35129:CDS |
TCTCCGGCATTGCCACCATT+TGG | 0.391023 | 4.4:-19640365 | MS.gene35129:CDS |
GCTCTTTGGAGAGGCTGGTC+TGG | 0.391117 | 4.4:-19640324 | MS.gene35129:CDS |
ATCGGAGGTATGCTTAGTTC+CGG | 0.392486 | 4.4:-19640474 | MS.gene35129:CDS |
TTCGACGGAGGAGGAGGAGG+GGG | 0.409531 | 4.4:+19640528 | None:intergenic |
AATTCTGTATTCTTTCTTAG+TGG | 0.410645 | 4.4:-19640192 | MS.gene35129:CDS |
ATACTGCAGTCGGTCACATC+TGG | 0.420740 | 4.4:-19636190 | MS.gene35129:CDS |
TTCAGGCTATCAAGAACATT+GGG | 0.434940 | 4.4:-19637976 | MS.gene35129:intron |
TGTCTGATTGCTTCAAGCTC+AGG | 0.435885 | 4.4:+19633624 | None:intergenic |
TGCAGTTGCTCGAATTGCTT+TGG | 0.438478 | 4.4:-19632024 | MS.gene35129:intron |
TATAGAAATGAAGGTCTTGC+TGG | 0.438554 | 4.4:-19640054 | MS.gene35129:CDS |
GACTTCGACGGAGGAGGAGG+AGG | 0.440031 | 4.4:+19640525 | None:intergenic |
TCAACAGAATTCAAATGTCT+GGG | 0.440219 | 4.4:-19636510 | MS.gene35129:intron |
TATATTGAGAGCTGCTCAAA+TGG | 0.442321 | 4.4:-19631967 | MS.gene35129:CDS |
CTGGACTGTCCGATCAAGAT+TGG | 0.444309 | 4.4:-19636171 | MS.gene35129:CDS |
TTGCTAAGGGTTTAGTGGAT+GGG | 0.449338 | 4.4:-19640089 | MS.gene35129:CDS |
TCTGGCAAATTATGTGGATA+TGG | 0.450956 | 4.4:-19640306 | MS.gene35129:CDS |
TTCGACTTCGACGGAGGAGG+AGG | 0.452260 | 4.4:+19640522 | None:intergenic |
TTTCCAAATGGTGGCAATGC+CGG | 0.458362 | 4.4:+19640362 | None:intergenic |
CCTAGAAGTGCAATGCGAAT+AGG | 0.459578 | 4.4:+19637926 | None:intergenic |
ACCAACAGCACCAGCTGTAT+AGG | 0.459878 | 4.4:+19638148 | None:intergenic |
TATGCCGCCGACGATGATCA+TGG | 0.461553 | 4.4:-19640234 | MS.gene35129:CDS |
TTTGCTAAGGGTTTAGTGGA+TGG | 0.461579 | 4.4:-19640090 | MS.gene35129:CDS |
CATTGCCACCATTTGGAAAG+AGG | 0.471057 | 4.4:-19640358 | MS.gene35129:CDS |
AGAAGGATGCAGGAGCTTAT+GGG | 0.471110 | 4.4:-19633600 | MS.gene35129:CDS |
AATGGGTCAGATAGCTGAAA+AGG | 0.471285 | 4.4:-19631949 | MS.gene35129:intron |
AATCCTTTAATACCACCGTT+TGG | 0.477778 | 4.4:-19636101 | MS.gene35129:CDS |
TTATGTGGATATGGTATTCA+AGG | 0.477831 | 4.4:-19640297 | MS.gene35129:CDS |
AACCACTGCAAAGTTACAAC+TGG | 0.478193 | 4.4:+19637902 | None:intergenic |
AAAGGCTGAATCTGCTATGC+AGG | 0.479856 | 4.4:-19638075 | MS.gene35129:intron |
TAATTAATTTAGGGAGGCAG+AGG | 0.482187 | 4.4:-19633254 | MS.gene35129:intron |
AAGTCGAAATATGATTATTA+CGG | 0.492331 | 4.4:-19640507 | MS.gene35129:CDS |
CGAGAGGTGTTATAGCGAGA+TGG | 0.495438 | 4.4:+19640445 | None:intergenic |
CATGACATTGTCAGCCGGGT+TGG | 0.497330 | 4.4:+19638115 | None:intergenic |
TAAACCGATCAGCAATGGTA+AGG | 0.497564 | 4.4:-19634711 | MS.gene35129:intron |
TTTCAGGCTATCAAGAACAT+TGG | 0.498796 | 4.4:-19637977 | MS.gene35129:intron |
CTTCGACGGAGGAGGAGGAG+GGG | 0.499284 | 4.4:+19640527 | None:intergenic |
CCGTTAGTATATAGAAATGA+AGG | 0.501561 | 4.4:-19640063 | MS.gene35129:CDS |
AGAACCTTCCTCTTTCCAAA+TGG | 0.504249 | 4.4:+19640350 | None:intergenic |
TGCTTAGCAGCCTATACAGC+TGG | 0.506119 | 4.4:-19638158 | MS.gene35129:CDS |
CAGGAGCTTATGGGCCGACA+TGG | 0.509267 | 4.4:-19633591 | MS.gene35129:CDS |
AGTATTAGGAAAACTTCTGA+AGG | 0.519425 | 4.4:-19636481 | MS.gene35129:CDS |
ACCTTCCTCTTTCCAAATGG+TGG | 0.519775 | 4.4:+19640353 | None:intergenic |
ATTCAAGGAGGGTTCAAATA+CGG | 0.527451 | 4.4:-19640282 | MS.gene35129:CDS |
TGTTCTACAGCACAACAACT+TGG | 0.529039 | 4.4:-19638188 | MS.gene35129:CDS |
AGCAAAGCAGACAAAAGTTA+CGG | 0.530115 | 4.4:-19630534 | MS.gene35129:intron |
GCCTATACAGCTGGTGCTGT+TGG | 0.530443 | 4.4:-19638149 | MS.gene35129:CDS |
GTGAAACCAGAGAAAGCAAA+AGG | 0.534388 | 4.4:-19632002 | MS.gene35129:CDS |
CCTTCATTTCTATATACTAA+CGG | 0.535894 | 4.4:+19640063 | None:intergenic |
GGTTCTTATGCTCTTTGGAG+AGG | 0.538976 | 4.4:-19640333 | MS.gene35129:CDS |
GGCTGGTCTGGCAAATTATG+TGG | 0.540924 | 4.4:-19640312 | MS.gene35129:CDS |
TATTTCGACTTCGACGGAGG+AGG | 0.542024 | 4.4:+19640519 | None:intergenic |
ATAGGGGCCTTGTTCCATTG+TGG | 0.544225 | 4.4:-19640026 | MS.gene35129:CDS |
AGATTACCGCGGCGCCATGT+CGG | 0.545977 | 4.4:+19633577 | None:intergenic |
CTGGTCATGACATTGTCAGC+CGG | 0.546536 | 4.4:+19638110 | None:intergenic |
GCCACCATTTGGAAAGAGGA+AGG | 0.547817 | 4.4:-19640354 | MS.gene35129:CDS |
TAACCTCTTTGCATCTTCCT+GGG | 0.550727 | 4.4:+19633436 | None:intergenic |
AATCAGACAGAGAAGGATGC+AGG | 0.552488 | 4.4:-19633610 | MS.gene35129:CDS |
AAGAACAATGGAATTCTCTC+CGG | 0.553563 | 4.4:-19640381 | MS.gene35129:CDS |
ACTTCGACGGAGGAGGAGGA+GGG | 0.554033 | 4.4:+19640526 | None:intergenic |
TGGTCATGACATTGTCAGCC+GGG | 0.555343 | 4.4:+19638111 | None:intergenic |
GAGAGGTGTTATAGCGAGAT+GGG | 0.556978 | 4.4:+19640446 | None:intergenic |
ATATTGAGAGCTGCTCAAAT+GGG | 0.560634 | 4.4:-19631966 | MS.gene35129:CDS |
AATCTCCTTATAAAACCAAA+CGG | 0.560779 | 4.4:+19636086 | None:intergenic |
TATAGCGAGATGGGTGGCGC+CGG | 0.561187 | 4.4:+19640455 | None:intergenic |
AGAAAGACTCATAACACTGC+TGG | 0.563869 | 4.4:-19630576 | MS.gene35129:CDS |
TCATATTTCGACTTCGACGG+AGG | 0.567633 | 4.4:+19640516 | None:intergenic |
TTCAACATTTGAGCATTCAG+TGG | 0.570746 | 4.4:-19638252 | MS.gene35129:CDS |
CAACAGAATTCAAATGTCTG+GGG | 0.573112 | 4.4:-19636509 | MS.gene35129:intron |
TGAAAGGCGTGGAAAGATCA+AGG | 0.574781 | 4.4:-19634684 | MS.gene35129:intron |
TGTGGATATGGTATTCAAGG+AGG | 0.580547 | 4.4:-19640294 | MS.gene35129:CDS |
TAATCATATTTCGACTTCGA+CGG | 0.584152 | 4.4:+19640513 | None:intergenic |
ATGCCGCCGACGATGATCAT+GGG | 0.585288 | 4.4:-19640233 | MS.gene35129:CDS |
TATTAGGAAAACTTCTGAAG+GGG | 0.585653 | 4.4:-19636479 | MS.gene35129:CDS |
CTAGACCGTCCAATCTTGAT+CGG | 0.585880 | 4.4:+19636162 | None:intergenic |
AAACCGATCAGCAATGGTAA+GGG | 0.587221 | 4.4:-19634710 | MS.gene35129:intron |
GTATTAGGAAAACTTCTGAA+GGG | 0.588019 | 4.4:-19636480 | MS.gene35129:CDS |
GACCAGTTGTAACTTTGCAG+TGG | 0.589165 | 4.4:-19637904 | MS.gene35129:CDS |
GGAAGATTGCGGCTCCACAA+TGG | 0.591214 | 4.4:+19640012 | None:intergenic |
TACGGAGTTTGCTTTATCGG+AGG | 0.594304 | 4.4:-19640489 | MS.gene35129:CDS |
GTGGATATGGTATTCAAGGA+GGG | 0.604464 | 4.4:-19640293 | MS.gene35129:CDS |
CCCTGAACAACAGAGTGCCC+AGG | 0.607259 | 4.4:-19633453 | MS.gene35129:CDS |
AATTAGGTTGAATTTGAACA+CGG | 0.611292 | 4.4:+19640112 | None:intergenic |
TGCGGCTCCACAATGGAACA+AGG | 0.613581 | 4.4:+19640019 | None:intergenic |
CTGGGTTGTGTGCAGTCGGG+AGG | 0.615982 | 4.4:-19636221 | MS.gene35129:intron |
TTGAAGCAATCAGACAGAGA+AGG | 0.625366 | 4.4:-19633617 | MS.gene35129:CDS |
CTTACTTACAGGGAAGATTG+CGG | 0.626511 | 4.4:+19640001 | None:intergenic |
ACTGTCCGATCAAGATTGGA+CGG | 0.626530 | 4.4:-19636167 | MS.gene35129:CDS |
TGGTACTGTAATTTCCAACC+CGG | 0.633731 | 4.4:-19638129 | MS.gene35129:CDS |
GAGACGTCGAAGTGTTCTTG+AGG | 0.641596 | 4.4:-19630417 | MS.gene35129:CDS |
GGTAGTGACTATACTGCAGT+CGG | 0.642321 | 4.4:-19636200 | MS.gene35129:CDS |
AATCATGCATAGAAGAAAGG+AGG | 0.643254 | 4.4:-19638213 | MS.gene35129:CDS |
AATCAACCCATGATCATCGT+CGG | 0.653686 | 4.4:+19640227 | None:intergenic |
GGTAAGGGATGTGAAAGGCG+TGG | 0.659007 | 4.4:-19634695 | MS.gene35129:CDS |
GTGCCCAGGAAGATGCAAAG+AGG | 0.668495 | 4.4:-19633439 | MS.gene35129:intron |
TGAACTATGTATCTCAACGT+GGG | 0.681593 | 4.4:-19636446 | MS.gene35129:intron |
CAACCCATGATCATCGTCGG+CGG | 0.684784 | 4.4:+19640230 | None:intergenic |
AGGTGTTATAGCGAGATGGG+TGG | 0.698855 | 4.4:+19640449 | None:intergenic |
CTCCTTATAAAACCAAACGG+TGG | 0.706204 | 4.4:+19636089 | None:intergenic |
GTGAACTATGTATCTCAACG+TGG | 0.706294 | 4.4:-19636447 | MS.gene35129:CDS |
TTGACTTTGAGTACATCGAG+AGG | 0.707069 | 4.4:+19640429 | None:intergenic |
GCAATGGTAAGGGATGTGAA+AGG | 0.716059 | 4.4:-19634700 | MS.gene35129:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 19630406 | 19640583 | 19630406 | ID=MS.gene35129 |
chr4.4 | mRNA | 19630406 | 19640583 | 19630406 | ID=MS.gene35129.t1;Parent=MS.gene35129 |
chr4.4 | exon | 19640010 | 19640583 | 19640010 | ID=MS.gene35129.t1.exon1;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19640010 | 19640583 | 19640010 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19638076 | 19638290 | 19638076 | ID=MS.gene35129.t1.exon2;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19638076 | 19638290 | 19638076 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19637869 | 19637993 | 19637869 | ID=MS.gene35129.t1.exon3;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19637869 | 19637993 | 19637869 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19636447 | 19636525 | 19636447 | ID=MS.gene35129.t1.exon4;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19636447 | 19636525 | 19636447 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19636074 | 19636228 | 19636074 | ID=MS.gene35129.t1.exon5;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19636074 | 19636228 | 19636074 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19634685 | 19634721 | 19634685 | ID=MS.gene35129.t1.exon6;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19634685 | 19634721 | 19634685 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19633590 | 19633652 | 19633590 | ID=MS.gene35129.t1.exon7;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19633590 | 19633652 | 19633590 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19633440 | 19633489 | 19633440 | ID=MS.gene35129.t1.exon8;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19633440 | 19633489 | 19633440 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19633200 | 19633264 | 19633200 | ID=MS.gene35129.t1.exon9;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19633200 | 19633264 | 19633200 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19631950 | 19632041 | 19631950 | ID=MS.gene35129.t1.exon10;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19631950 | 19632041 | 19631950 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19630535 | 19630606 | 19630535 | ID=MS.gene35129.t1.exon11;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19630535 | 19630606 | 19630535 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
chr4.4 | exon | 19630406 | 19630444 | 19630406 | ID=MS.gene35129.t1.exon12;Parent=MS.gene35129.t1 |
chr4.4 | CDS | 19630406 | 19630444 | 19630406 | ID=cds.MS.gene35129.t1;Parent=MS.gene35129.t1 |
Gene Sequence |
Protein sequence |