Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36230.t1 | XP_003597861.1 | 98.7 | 224 | 3 | 0 | 1 | 224 | 1 | 224 | 4.60E-111 | 410.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36230.t1 | O22224 | 77.9 | 226 | 47 | 3 | 1 | 224 | 1 | 225 | 9.9e-86 | 317.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36230.t1 | Q2HVW5 | 98.7 | 224 | 3 | 0 | 1 | 224 | 1 | 224 | 3.4e-111 | 410.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052661 | MS.gene36230 | 0.837779 | 4.25E-57 | -1.69E-46 |
| MS.gene052662 | MS.gene36230 | 0.835607 | 1.52E-56 | -1.69E-46 |
| MS.gene052663 | MS.gene36230 | 0.83258 | 8.71E-56 | -1.69E-46 |
| MS.gene060878 | MS.gene36230 | 0.950934 | 5.88E-109 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36230.t1 | MTR_2g103370 | 98.661 | 224 | 3 | 0 | 1 | 224 | 1 | 224 | 3.19e-154 | 449 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36230.t1 | AT2G41620 | 77.876 | 226 | 47 | 3 | 1 | 224 | 1 | 225 | 2.01e-115 | 349 |
| MS.gene36230.t1 | AT3G57350 | 75.221 | 226 | 51 | 4 | 1 | 224 | 1 | 223 | 5.30e-110 | 335 |
Find 0 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAAAATAACAGTTAT+TGG | + | 15689:27208-27227 | MS.gene36230:intron | 10.0% |
| !! | TTTATAAAATAACAGTTATT+GGG | + | 15689:27209-27228 | MS.gene36230:intron | 10.0% |
| !!! | ATATTTGCAATTTTATAATT+GGG | + | 15689:27823-27842 | MS.gene36230:intron | 10.0% |
| !!! | GTTTTTTTTTTTTTTTGAAA+CGG | - | 15689:26079-26098 | None:intergenic | 10.0% |
| !!! | TTTCTATTCATTTTTAATAT+TGG | - | 15689:27575-27594 | None:intergenic | 10.0% |
| !! | TTATAAAATAACAGTTATTG+GGG | + | 15689:27210-27229 | MS.gene36230:intron | 15.0% |
| !!! | ATTGATTTTTACTATGATTT+TGG | + | 15689:25175-25194 | MS.gene36230:intron | 15.0% |
| !!! | ATTTAAGATAGAATCAATTA+TGG | + | 15689:25588-25607 | MS.gene36230:intron | 15.0% |
| !!! | ATTTTATTGCATTGTTATAT+TGG | + | 15689:27852-27871 | MS.gene36230:intron | 15.0% |
| !!! | CATATTTGCAATTTTATAAT+TGG | + | 15689:27822-27841 | MS.gene36230:intron | 15.0% |
| !!! | TGTTTTACATATTTCTAATA+GGG | + | 15689:25747-25766 | MS.gene36230:intron | 15.0% |
| !!! | TTGATTTTTACTATGATTTT+GGG | + | 15689:25176-25195 | MS.gene36230:intron | 15.0% |
| !!! | TTGTTTTACATATTTCTAAT+AGG | + | 15689:25746-25765 | MS.gene36230:intron | 15.0% |
| !! | AAAAAAGAAGAGTGAAAAAA+TGG | - | 15689:25035-25054 | None:intergenic | 20.0% |
| !! | AAAGAATACAGAAAAAATCA+TGG | - | 15689:27135-27154 | None:intergenic | 20.0% |
| !! | ATCAATGAAAACTATAATGT+CGG | + | 15689:26701-26720 | MS.gene36230:intron | 20.0% |
| !! | ATTGCAAAATATATGTTAAG+TGG | - | 15689:25977-25996 | None:intergenic | 20.0% |
| !! | ATTGTAAAAGGATTTATGTT+TGG | + | 15689:25484-25503 | MS.gene36230:intron | 20.0% |
| !! | TATTTGTTCTTGATATTATG+TGG | + | 15689:27890-27909 | MS.gene36230:intron | 20.0% |
| !! | TGTATTCTTTGTGTAATTAT+TGG | + | 15689:27145-27164 | MS.gene36230:intron | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | 15689:25642-25661 | None:intergenic | 20.0% |
| !!! | TAAGTTGTTCTATTATGTTT+TGG | + | 15689:25360-25379 | MS.gene36230:intron | 20.0% |
| !!! | TACAAAATCAATTTTTGTCA+CGG | - | 15689:25433-25452 | None:intergenic | 20.0% |
| !!! | TATTTCCTTTTGAAAGTTTA+AGG | - | 15689:27362-27381 | None:intergenic | 20.0% |
| !!! | TGATTATATGATGAAAGTTT+TGG | + | 15689:27073-27092 | MS.gene36230:CDS | 20.0% |
| !!! | TGATTTTTACTATGATTTTG+GGG | + | 15689:25177-25196 | MS.gene36230:intron | 20.0% |
| !!! | TTATATTTTTGTGTGGATAT+GGG | + | 15689:27389-27408 | MS.gene36230:intron | 20.0% |
| !!! | TTTTCATGATATAACCTATT+TGG | + | 15689:26221-26240 | MS.gene36230:intron | 20.0% |
| !!! | TTTTTCACTCTTCTTTTTTT+AGG | + | 15689:25036-25055 | MS.gene36230:intron | 20.0% |
| !!! | TTTTTTTTAAGATAGTTCAG+AGG | - | 15689:26786-26805 | None:intergenic | 20.0% |
| ! | AAAAGCCTTAAACTTTCAAA+AGG | + | 15689:27354-27373 | MS.gene36230:intron | 25.0% |
| ! | AAATGAAAGCAAACTCAAAA+AGG | - | 15689:26656-26675 | None:intergenic | 25.0% |
| ! | AATTAAGTTTACATCCAGTT+AGG | - | 15689:26323-26342 | None:intergenic | 25.0% |
| ! | ACATTGAGTATCCAAATTAA+TGG | - | 15689:27250-27269 | None:intergenic | 25.0% |
| ! | AGAATTAAAGCTAAAAATCC+TGG | + | 15689:25565-25584 | MS.gene36230:intron | 25.0% |
| ! | ATTATGACAAAGGAATTGAT+GGG | + | 15689:27418-27437 | MS.gene36230:intron | 25.0% |
| ! | CATATCCACACAAAAATATA+AGG | - | 15689:27390-27409 | None:intergenic | 25.0% |
| ! | CTATGCTCATAAAAAATAAG+GGG | - | 15689:26852-26871 | None:intergenic | 25.0% |
| ! | CTTTACAAAACAACAAAAAC+AGG | - | 15689:26442-26461 | None:intergenic | 25.0% |
| ! | GCTATGCTCATAAAAAATAA+GGG | - | 15689:26853-26872 | None:intergenic | 25.0% |
| ! | GCTGAAAATAAGATATCTTA+TGG | + | 15689:27292-27311 | MS.gene36230:intron | 25.0% |
| ! | GGATTTATCGAACTATAATA+AGG | + | 15689:27439-27458 | MS.gene36230:intron | 25.0% |
| ! | GTGCATAAATTATAGTGTAA+GGG | - | 15689:26142-26161 | None:intergenic | 25.0% |
| ! | TAAAAGGATTTATGTTTGGT+TGG | + | 15689:25488-25507 | MS.gene36230:intron | 25.0% |
| ! | TAAGATAGAATCAATTATGG+AGG | + | 15689:25591-25610 | MS.gene36230:intron | 25.0% |
| ! | TAGGTTATATCATGAAAACA+AGG | - | 15689:26219-26238 | None:intergenic | 25.0% |
| ! | TATAATCATTGAAACTCCTA+AGG | - | 15689:27061-27080 | None:intergenic | 25.0% |
| ! | TATGCTCATAAAAAATAAGG+GGG | - | 15689:26851-26870 | None:intergenic | 25.0% |
| ! | TGCTATGCTCATAAAAAATA+AGG | - | 15689:26854-26873 | None:intergenic | 25.0% |
| ! | TGTCTATACAACTTAAAGTA+TGG | - | 15689:26280-26299 | None:intergenic | 25.0% |
| ! | TGTGCATAAATTATAGTGTA+AGG | - | 15689:26143-26162 | None:intergenic | 25.0% |
| ! | TTAAAAATCTGAATAGAGCA+AGG | + | 15689:28176-28195 | MS.gene36230:CDS | 25.0% |
| ! | TTATCGAACTATAATAAGGT+TGG | + | 15689:27443-27462 | MS.gene36230:intron | 25.0% |
| !! | AAAACATCTTTACCTTTTCT+TGG | + | 15689:26094-26113 | MS.gene36230:intron | 25.0% |
| !! | ATTGATTCTATCTTAAATCC+AGG | - | 15689:25586-25605 | None:intergenic | 25.0% |
| !! | ATTTTTGTGAACATTTTTGC+TGG | - | 15689:26683-26702 | None:intergenic | 25.0% |
| !! | GATTTGGTAAACCATTAATT+TGG | + | 15689:27236-27255 | MS.gene36230:intron | 25.0% |
| !! | GGATGTAAACTTAATTTTGT+TGG | + | 15689:26327-26346 | MS.gene36230:intron | 25.0% |
| !! | GGTTAAGTTTATATGCATTT+TGG | + | 15689:25057-25076 | MS.gene36230:intron | 25.0% |
| !! | GTGTAATTATTGGTTATTAC+TGG | + | 15689:27155-27174 | MS.gene36230:intron | 25.0% |
| !! | TTTACTTAAAAGTGAGTTGA+AGG | + | 15689:25461-25480 | MS.gene36230:intron | 25.0% |
| !! | TTTTGTAAAGACAACTTTTG+AGG | + | 15689:26452-26471 | MS.gene36230:intron | 25.0% |
| !!! | CTTATATTTTTGTGTGGATA+TGG | + | 15689:27388-27407 | MS.gene36230:intron | 25.0% |
| !!! | CTTTAGCTTTAAGAAAATGA+TGG | - | 15689:25811-25830 | None:intergenic | 25.0% |
| !!! | GTTTTCCATAATTTTGACTT+TGG | + | 15689:27641-27660 | MS.gene36230:intron | 25.0% |
| !!! | TAGCATTTAATGTTTTTGAC+AGG | + | 15689:27934-27953 | MS.gene36230:intron | 25.0% |
| !!! | TTATATGATGAAAGTTTTGG+AGG | + | 15689:27076-27095 | MS.gene36230:CDS | 25.0% |
| !!! | TTATTTTCACTGTTGTTTAG+AGG | + | 15689:25205-25224 | MS.gene36230:intron | 25.0% |
| !!! | TTTTTGCATACTTTTTGATG+AGG | + | 15689:27469-27488 | MS.gene36230:intron | 25.0% |
| AAAACAACAAAAACAGGCAA+AGG | - | 15689:26436-26455 | None:intergenic | 30.0% | |
| AAAACAATCAATCAGCCAAA+TGG | - | 15689:27714-27733 | None:intergenic | 30.0% | |
| AAACAACAAAAACAGGCAAA+GGG | - | 15689:26435-26454 | None:intergenic | 30.0% | |
| AAACAATCAATCAGCCAAAT+GGG | - | 15689:27713-27732 | None:intergenic | 30.0% | |
| ACAAGGAATTCTATCCAAAT+AGG | - | 15689:26238-26257 | None:intergenic | 30.0% | |
| ACATCAGGAAAGTTTATACA+AGG | - | 15689:26255-26274 | None:intergenic | 30.0% | |
| ACTTAAAGTATGGTTACATC+AGG | - | 15689:26270-26289 | None:intergenic | 30.0% | |
| AGTGATAACTAAATCCAAGA+TGG | - | 15689:26554-26573 | None:intergenic | 30.0% | |
| AGTTTGTGCAACTTTAAGTA+TGG | - | 15689:26195-26214 | None:intergenic | 30.0% | |
| ATGATTGCTAATAGCAATGT+GGG | + | 15689:28028-28047 | MS.gene36230:CDS | 30.0% | |
| ATGTTTGGTTGGATACATTT+AGG | + | 15689:25499-25518 | MS.gene36230:intron | 30.0% | |
| CATGTGAACTTCAATATGAA+AGG | + | 15689:27757-27776 | MS.gene36230:intron | 30.0% | |
| CATTGCCAAAGTCAAAATTA+TGG | - | 15689:27649-27668 | None:intergenic | 30.0% | |
| GAATAGTACAATCCAAGAAA+AGG | - | 15689:26109-26128 | None:intergenic | 30.0% | |
| GATTATGACAAAGGAATTGA+TGG | + | 15689:27417-27436 | MS.gene36230:intron | 30.0% | |
| GTTTATTAGGACATGTATGA+TGG | - | 15689:25782-25801 | None:intergenic | 30.0% | |
| TAGGTTATATCAGGAAAACA+AGG | - | 15689:26304-26323 | None:intergenic | 30.0% | |
| TGTCACAATTCTATTCAGAA+AGG | - | 15689:26961-26980 | None:intergenic | 30.0% | |
| ! | GAGAAATTTTCATACACAGA+GGG | - | 15689:27536-27555 | None:intergenic | 30.0% |
| ! | GATGAGGATATATCCTTTTT+CGG | + | 15689:27485-27504 | MS.gene36230:intron | 30.0% |
| ! | TGAGAAATTTTCATACACAG+AGG | - | 15689:27537-27556 | None:intergenic | 30.0% |
| ! | TTTTCCTGATATAACCTAAC+TGG | + | 15689:26306-26325 | MS.gene36230:intron | 30.0% |
| !! | AAATTGCTTGTTATCCATCT+TGG | + | 15689:26537-26556 | MS.gene36230:intron | 30.0% |
| !! | AGCTTTAAGAAAATGATGGA+AGG | - | 15689:25807-25826 | None:intergenic | 30.0% |
| !! | CATTTAATGTTTTTGACAGG+AGG | + | 15689:27937-27956 | MS.gene36230:intron | 30.0% |
| !! | TCAGTCCTTATATTTTTGTG+TGG | + | 15689:27382-27401 | MS.gene36230:intron | 30.0% |
| !! | TGGTAAGTTTCTAGTTTAGT+TGG | + | 15689:25380-25399 | MS.gene36230:intron | 30.0% |
| !! | TTTGAAGTCATTTGAGTTGA+AGG | + | 15689:25949-25968 | MS.gene36230:CDS | 30.0% |
| !!! | CTTTTTTTGCTTTCTCAGTA+GGG | + | 15689:25714-25733 | MS.gene36230:intron | 30.0% |
| !!! | TAATTTTGACTTTGGCAATG+AGG | + | 15689:27649-27668 | MS.gene36230:intron | 30.0% |
| !!! | TTTATTTTGCACTCACATAC+AGG | + | 15689:25882-25901 | MS.gene36230:intron | 30.0% |
| !!! | TTTTTTTGCTTTCTCAGTAG+GGG | + | 15689:25715-25734 | MS.gene36230:intron | 30.0% |
| AAATCCTGCTTAAACTCTGA+AGG | - | 15689:27988-28007 | None:intergenic | 35.0% | |
| ACAGTTATTGGGGTAAGATT+TGG | + | 15689:27220-27239 | MS.gene36230:intron | 35.0% | |
| ACATCCAGTTAGGTTATATC+AGG | - | 15689:26313-26332 | None:intergenic | 35.0% | |
| ACCAATCAAATCATCCCATT+TGG | + | 15689:27696-27715 | MS.gene36230:intron | 35.0% | |
| ATTTCCTTCAGAGTTTAAGC+AGG | + | 15689:27981-28000 | MS.gene36230:CDS | 35.0% | |
| CATGATTGCTAATAGCAATG+TGG | + | 15689:28027-28046 | MS.gene36230:CDS | 35.0% | |
| GAAGAGTAAGGAGACTTAAT+TGG | - | 15689:26926-26945 | None:intergenic | 35.0% | |
| GATTGGTGAGAAGTTTAAGT+AGG | - | 15689:27683-27702 | None:intergenic | 35.0% | |
| TAATCTTGCCTTTCATGTCA+TGG | + | 15689:27105-27124 | MS.gene36230:intron | 35.0% | |
| TGAAGTTATGTACCTTGCTA+TGG | + | 15689:26896-26915 | MS.gene36230:intron | 35.0% | |
| TGGGTACAAGATTATGACAA+AGG | + | 15689:27408-27427 | MS.gene36230:intron | 35.0% | |
| TTAGCAATCATGTTTGTCCT+TGG | - | 15689:28019-28038 | None:intergenic | 35.0% | |
| TTGAATTCACGACAGCATAT+AGG | + | 15689:25835-25854 | MS.gene36230:intron | 35.0% | |
| ! | ATGATGGAAGGCAGTTTATT+AGG | - | 15689:25795-25814 | None:intergenic | 35.0% |
| ! | CATATTTCTAATAGGGCATG+TGG | + | 15689:25754-25773 | MS.gene36230:intron | 35.0% |
| ! | GAAGTTATGTACCTTGCTAT+GGG | + | 15689:26897-26916 | MS.gene36230:intron | 35.0% |
| ! | GTGAGTTGAAGGATTGTAAA+AGG | + | 15689:25472-25491 | MS.gene36230:intron | 35.0% |
| ! | TTAATTGGTTTCCCATAGCA+AGG | - | 15689:26911-26930 | None:intergenic | 35.0% |
| !! | AATGTTTTTGACAGGAGGAT+TGG | + | 15689:27942-27961 | MS.gene36230:intron | 35.0% |
| !! | ATAATGTCGGAGTTCTGAAT+AGG | + | 15689:26714-26733 | MS.gene36230:intron | 35.0% |
| !! | GAATACTCTTTTTCGTTCTC+AGG | + | 15689:26986-27005 | MS.gene36230:intron | 35.0% |
| !! | GATTGCTTTTAGTGCATGTT+TGG | + | 15689:25402-25421 | MS.gene36230:intron | 35.0% |
| !!! | GCTTTTTTTGCTTTCTCAGT+AGG | + | 15689:25713-25732 | MS.gene36230:intron | 35.0% |
| AAGCTCAGAAGGATAACCTT+AGG | + | 15689:27042-27061 | MS.gene36230:CDS | 40.0% | |
| AATACCACGCACATCAACAA+AGG | - | 15689:26818-26837 | None:intergenic | 40.0% | |
| AATGCTACTGAGCAGTAAGA+AGG | - | 15689:27921-27940 | None:intergenic | 40.0% | |
| ACAAGCTTAGTTGCTCTTGT+TGG | + | 15689:26366-26385 | MS.gene36230:intron | 40.0% | |
| ACCAAGTCAAGTGAAGAGTA+AGG | - | 15689:26938-26957 | None:intergenic | 40.0% | |
| ACCATAGACACAATTTGACC+AGG | - | 15689:28061-28080 | None:intergenic | 40.0% | |
| AGCCAAAGCAAGAAAAAGAC+AGG | - | 15689:27275-27294 | None:intergenic | 40.0% | |
| CAAGCTTAGTTGCTCTTGTT+GGG | + | 15689:26367-26386 | MS.gene36230:intron | 40.0% | |
| CCATAGACACAATTTGACCA+GGG | - | 15689:28060-28079 | None:intergenic | 40.0% | |
| CGAACGAAGATTTATCCAGT+TGG | + | 15689:24922-24941 | MS.gene36230:CDS | 40.0% | |
| GCAGGATTTCAACATTACCA+AGG | + | 15689:27999-28018 | MS.gene36230:CDS | 40.0% | |
| GCCAAATGGGATGATTTGAT+TGG | - | 15689:27700-27719 | None:intergenic | 40.0% | |
| GGAAACAAGGATTACAGACA+AGG | - | 15689:27515-27534 | None:intergenic | 40.0% | |
| TAGACCCATCGCAGATAAAA+AGG | + | 15689:28132-28151 | MS.gene36230:CDS | 40.0% | |
| TCAGGTTCATGAAATGGCAA+TGG | + | 15689:27004-27023 | MS.gene36230:intron | 40.0% | |
| TCCTTACTCTTCACTTGACT+TGG | + | 15689:26934-26953 | MS.gene36230:intron | 40.0% | |
| TCGTTCTCAGGTTCATGAAA+TGG | + | 15689:26998-27017 | MS.gene36230:intron | 40.0% | |
| TTCATACACAGAGGGAAACA+AGG | - | 15689:27528-27547 | None:intergenic | 40.0% | |
| ! | AGATGCCTTTTTATCTGCGA+TGG | - | 15689:28140-28159 | None:intergenic | 40.0% |
| ! | CACTGTTGTTTAGAGGAACT+TGG | + | 15689:25212-25231 | MS.gene36230:intron | 40.0% |
| ! | GATGCCTTTTTATCTGCGAT+GGG | - | 15689:28139-28158 | None:intergenic | 40.0% |
| ! | GTCCTGTCTTTTTCTTGCTT+TGG | + | 15689:27270-27289 | MS.gene36230:intron | 40.0% |
| ! | TGAGGATGTTTTTCCTGTTG+AGG | + | 15689:26470-26489 | MS.gene36230:CDS | 40.0% |
| AAATGCAGAGCAGCTTGCAA+GGG | + | 15689:25925-25944 | MS.gene36230:CDS | 45.0% | |
| ACAAGTCTCTTCTGGTAGCA+TGG | + | 15689:28090-28109 | MS.gene36230:CDS | 45.0% | |
| ATGCTACCAGAAGAGACTTG+TGG | - | 15689:28091-28110 | None:intergenic | 45.0% | |
| ATGGTGTGCCATGACATGAA+AGG | - | 15689:27116-27135 | None:intergenic | 45.0% | |
| ATTGAGAGAACCTGAAGAGG+AGG | - | 15689:25008-25027 | None:intergenic | 45.0% | |
| CAGACAAGGTTCACCGAAAA+AGG | - | 15689:27501-27520 | None:intergenic | 45.0% | |
| CCCTGGTCAAATTGTGTCTA+TGG | + | 15689:28057-28076 | MS.gene36230:CDS | 45.0% | |
| GAGATTGAGAGAACCTGAAG+AGG | - | 15689:25011-25030 | None:intergenic | 45.0% | |
| GGAGGAAGAGTGAAGTAGAT+CGG | - | 15689:24949-24968 | None:intergenic | 45.0% | |
| TAAATGCAGAGCAGCTTGCA+AGG | + | 15689:25924-25943 | MS.gene36230:CDS | 45.0% | |
| TAGACACAATTTGACCAGGG+CGG | - | 15689:28057-28076 | None:intergenic | 45.0% | |
| TCTACTCCACAAGTCTCTTC+TGG | + | 15689:28082-28101 | MS.gene36230:CDS | 45.0% | |
| TTGAGAGAACCTGAAGAGGA+GGG | - | 15689:25007-25026 | None:intergenic | 45.0% | |
| ! | AGAGTACCTAGTTGCAGCAA+TGG | - | 15689:25304-25323 | None:intergenic | 45.0% |
| !! | AATAATAAAGAAAATAAAAT+AGG | - | 15689:27323-27342 | None:intergenic | 5.0% |
| AGACACAATTTGACCAGGGC+GGG | - | 15689:28056-28075 | None:intergenic | 50.0% | |
| ATACAGGCTTCTTGCTCGTG+AGG | + | 15689:25898-25917 | MS.gene36230:intron | 50.0% | |
| ATCCTTCTGAGCTTCCTGGA+CGG | - | 15689:27036-27055 | None:intergenic | 50.0% | |
| CACAGTCCATTGCTGCAACT+AGG | + | 15689:25295-25314 | MS.gene36230:CDS | 50.0% | |
| CGCTTCAGCTCTTACAGTCT+TGG | - | 15689:25271-25290 | None:intergenic | 50.0% | |
| CTGAATAGAGCAAGGCAGTC+TGG | + | 15689:28184-28203 | MS.gene36230:CDS | 50.0% | |
| CTGTCCTTTGTTGATGTGCG+TGG | + | 15689:26811-26830 | MS.gene36230:intron | 50.0% | |
| GCGATGGGTCTACTAGTCAT+GGG | - | 15689:28124-28143 | None:intergenic | 50.0% | |
| GGTTATCCTTCTGAGCTTCC+TGG | - | 15689:27040-27059 | None:intergenic | 50.0% | |
| GTGAAGTAGATCGGTCCAAC+TGG | - | 15689:24940-24959 | None:intergenic | 50.0% | |
| TACAGGCTTCTTGCTCGTGA+GGG | + | 15689:25899-25918 | MS.gene36230:intron | 50.0% | |
| TGCGATGGGTCTACTAGTCA+TGG | - | 15689:28125-28144 | None:intergenic | 50.0% | |
| !! | GTTGCAGCAATGGACTGTGA+CGG | - | 15689:25294-25313 | None:intergenic | 50.0% |
| ATACCCGCACAAGACGCACA+TGG | - | 15689:26040-26059 | None:intergenic | 55.0% | |
| CGTACCATGTGCGTCTTGTG+CGG | + | 15689:26033-26052 | MS.gene36230:intron | 55.0% | |
| CTGAAGAGGAGGGAACTGAG+CGG | - | 15689:24997-25016 | None:intergenic | 55.0% | |
| GTACCATGTGCGTCTTGTGC+GGG | + | 15689:26034-26053 | MS.gene36230:intron | 55.0% | |
| ! | AGCGGCTTGTTCGAGAAGCT+TGG | - | 15689:24970-24989 | None:intergenic | 55.0% |
| ! | GGCTTGTTCGAGAAGCTTGG+AGG | - | 15689:24967-24986 | None:intergenic | 55.0% |
| ! | TCGACGCTTGTTGCCTCAAC+AGG | - | 15689:26486-26505 | None:intergenic | 55.0% |
| !! | CGTCGAAGAGTATCTGCAGC+AGG | + | 15689:26500-26519 | MS.gene36230:CDS | 55.0% |
| AGAGGAGGGAACTGAGCGGA+AGG | - | 15689:24993-25012 | None:intergenic | 60.0% | |
| AGGGAACTGAGCGGAAGGAG+CGG | - | 15689:24988-25007 | None:intergenic | 60.0% | |
| CGCTCAGTTCCCTCCTCTTC+AGG | + | 15689:24995-25014 | MS.gene36230:CDS | 60.0% | |
| TGCCGTCCAGGAAGCTCAGA+AGG | + | 15689:27031-27050 | MS.gene36230:CDS | 60.0% | |
| GGCAATGGTCTCTGCCGTCC+AGG | + | 15689:27019-27038 | MS.gene36230:CDS | 65.0% | |
| AGCAATGTGGGTGCCCGCCC+TGG | + | 15689:28040-28059 | MS.gene36230:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15689 | gene | 24918 | 28219 | 24918 | ID=MS.gene36230 |
| 15689 | mRNA | 24918 | 28219 | 24918 | ID=MS.gene36230.t1;Parent=MS.gene36230 |
| 15689 | exon | 24918 | 25016 | 24918 | ID=MS.gene36230.t1.exon1;Parent=MS.gene36230.t1 |
| 15689 | CDS | 24918 | 25016 | 24918 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| 15689 | exon | 25225 | 25316 | 25225 | ID=MS.gene36230.t1.exon2;Parent=MS.gene36230.t1 |
| 15689 | CDS | 25225 | 25316 | 25225 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| 15689 | exon | 25904 | 25970 | 25904 | ID=MS.gene36230.t1.exon3;Parent=MS.gene36230.t1 |
| 15689 | CDS | 25904 | 25970 | 25904 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| 15689 | exon | 26462 | 26521 | 26462 | ID=MS.gene36230.t1.exon4;Parent=MS.gene36230.t1 |
| 15689 | CDS | 26462 | 26521 | 26462 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| 15689 | exon | 27008 | 27097 | 27008 | ID=MS.gene36230.t1.exon5;Parent=MS.gene36230.t1 |
| 15689 | CDS | 27008 | 27097 | 27008 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| 15689 | exon | 27956 | 28219 | 27956 | ID=MS.gene36230.t1.exon6;Parent=MS.gene36230.t1 |
| 15689 | CDS | 27956 | 28219 | 27956 | ID=cds.MS.gene36230.t1;Parent=MS.gene36230.t1 |
| Gene Sequence |
| Protein sequence |
