Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36272.t1 | XP_003597804.1 | 98.1 | 371 | 7 | 0 | 4 | 374 | 60 | 430 | 3.70E-214 | 753.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36272.t1 | Q944I4 | 72.2 | 371 | 99 | 1 | 6 | 372 | 84 | 454 | 8.3e-162 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36272.t1 | G7IME0 | 98.1 | 371 | 7 | 0 | 4 | 374 | 60 | 430 | 2.7e-214 | 753.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049805 | MS.gene36272 | 0.801139 | 1.04E-48 | -1.69E-46 |
| MS.gene050747 | MS.gene36272 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene36272 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene36272 | 0.848652 | 5.35E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene36272 | 0.801126 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36272.t1 | MTR_2g102510 | 98.113 | 371 | 7 | 0 | 4 | 374 | 60 | 430 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36272.t1 | AT1G80380 | 72.312 | 372 | 99 | 2 | 6 | 373 | 84 | 455 | 0.0 | 573 |
| MS.gene36272.t1 | AT1G80380 | 76.081 | 347 | 82 | 1 | 28 | 373 | 17 | 363 | 0.0 | 570 |
| MS.gene36272.t1 | AT1G80380 | 71.237 | 372 | 97 | 3 | 6 | 373 | 84 | 449 | 0.0 | 556 |
| MS.gene36272.t1 | AT1G80380 | 71.196 | 368 | 80 | 1 | 32 | 373 | 22 | 389 | 0.0 | 553 |
| MS.gene36272.t1 | AT1G80380 | 75.828 | 302 | 72 | 1 | 28 | 328 | 17 | 318 | 7.98e-178 | 497 |
| MS.gene36272.t1 | AT1G80380 | 71.148 | 305 | 78 | 1 | 32 | 336 | 22 | 316 | 8.78e-168 | 471 |
| MS.gene36272.t1 | AT1G80380 | 71.148 | 305 | 78 | 1 | 32 | 336 | 22 | 316 | 8.78e-168 | 471 |
| MS.gene36272.t1 | AT1G80380 | 78.205 | 156 | 34 | 0 | 218 | 373 | 206 | 361 | 5.67e-88 | 270 |
| MS.gene36272.t1 | AT1G80380 | 58.871 | 124 | 47 | 2 | 6 | 125 | 84 | 207 | 3.09e-43 | 154 |
Find 93 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACCTTCTTTAGACATTT+TGG | 0.145843 | 2.1:+3080700 | None:intergenic |
| GTCTTCTTTATCTTTGAATT+TGG | 0.191076 | 2.1:+3081383 | None:intergenic |
| GGACCTTTGCTTGACAAAAT+TGG | 0.212489 | 2.1:-3081582 | MS.gene36272:CDS |
| ATGGATAGTCATTAAGATTA+AGG | 0.292516 | 2.1:-3079642 | MS.gene36272:CDS |
| TGTCTATCAGTGGCGCTTGC+AGG | 0.297010 | 2.1:-3079609 | MS.gene36272:intron |
| TGGTATTTGCAGTCTGCTTT+TGG | 0.299436 | 2.1:-3080499 | MS.gene36272:intron |
| TCCCTTACTTTATCATATCT+TGG | 0.308071 | 2.1:+3080586 | None:intergenic |
| GTCAAAGTTTCAACCGAAAA+AGG | 0.310671 | 2.1:+3080731 | None:intergenic |
| CTTTGAATTTGGCCTGATGC+TGG | 0.334036 | 2.1:+3081394 | None:intergenic |
| ATAGACTCGGCCACCTTCTC+TGG | 0.337691 | 2.1:+3081552 | None:intergenic |
| ACCTCAAGAAGTGCATTTCC+TGG | 0.343475 | 2.1:+3080871 | None:intergenic |
| AAGCATACCTGCCAATCATT+TGG | 0.369193 | 2.1:+3081162 | None:intergenic |
| ATGAGGGAGGCAGGCAATCC+TGG | 0.392865 | 2.1:-3079485 | MS.gene36272:CDS |
| AGGTTGTGTTGTTTGAAGGC+TGG | 0.409447 | 2.1:-3079943 | MS.gene36272:CDS |
| CTGTATGAATTTATTTGCTC+AGG | 0.412090 | 2.1:-3081603 | MS.gene36272:CDS |
| ATATTTATTTGTACCACTAA+AGG | 0.423885 | 2.1:+3081354 | None:intergenic |
| TTCCAGTATCGTGGAAATGC+TGG | 0.431484 | 2.1:-3080767 | MS.gene36272:intron |
| ACGCATCATAATACACTTTG+AGG | 0.437091 | 2.1:+3079684 | None:intergenic |
| AAATAAATTCATACAGATCT+TGG | 0.440314 | 2.1:+3081610 | None:intergenic |
| AAGTGAGATTGCCCAGCATC+AGG | 0.458306 | 2.1:-3081406 | MS.gene36272:CDS |
| ATATCTTGGTAACTTCATCT+TGG | 0.462952 | 2.1:+3080600 | None:intergenic |
| CTGCAGGTAATGGAAGTTCA+TGG | 0.469173 | 2.1:-3081725 | MS.gene36272:intron |
| AGAAGACATACCTCCTTTAG+TGG | 0.474427 | 2.1:-3081367 | MS.gene36272:intron |
| TTGTTTGAAGGCTGGATGCT+TGG | 0.477539 | 2.1:-3079935 | MS.gene36272:CDS |
| GAAGGAAATACTGAATATAC+AGG | 0.480015 | 2.1:+3081657 | None:intergenic |
| TTATTTGACGGCTGAAGGCC+AGG | 0.485153 | 2.1:-3081008 | MS.gene36272:intron |
| TCGACATGGCCTGAAATTGA+AGG | 0.485478 | 2.1:-3080451 | MS.gene36272:CDS |
| CGCCACTGATAGACACAGCT+TGG | 0.491413 | 2.1:+3079617 | None:intergenic |
| GATCTTGGACAGATGAAACT+TGG | 0.496573 | 2.1:+3081625 | None:intergenic |
| GAAACTTGGGCAGGTGATGA+AGG | 0.496749 | 2.1:+3081639 | None:intergenic |
| ATAGATAAGTGGTTGTCGTA+TGG | 0.496942 | 2.1:-3081531 | MS.gene36272:CDS |
| ACATCGAAATAGACGAAAAG+AGG | 0.497510 | 2.1:-3079271 | MS.gene36272:CDS |
| AAACTAAGAGAGGCTAATCC+AGG | 0.500572 | 2.1:-3080889 | MS.gene36272:CDS |
| ACCTGCCAATCATTTGGAAA+AGG | 0.500879 | 2.1:+3081168 | None:intergenic |
| CGATGTTTAGTAGATGTTGA+GGG | 0.501714 | 2.1:+3079288 | None:intergenic |
| TTTGAATTTGGCCTGATGCT+GGG | 0.505536 | 2.1:+3081395 | None:intergenic |
| TGTAAAAGCTGTTGATCCCC+AGG | 0.506872 | 2.1:-3079888 | MS.gene36272:intron |
| GAAATTGCTATGAGGGAGGC+AGG | 0.507235 | 2.1:-3079494 | MS.gene36272:CDS |
| TAGATAAGTGGTTGTCGTAT+GGG | 0.507325 | 2.1:-3081530 | MS.gene36272:CDS |
| ACTATATACCAGTCTTCCTA+TGG | 0.513671 | 2.1:-3081434 | MS.gene36272:CDS |
| TACTCAATCACCATGGATCA+AGG | 0.515168 | 2.1:-3083593 | None:intergenic |
| CTTTCACACCATAGGAAGAC+TGG | 0.516172 | 2.1:+3081426 | None:intergenic |
| ATTGAGTTTACCTTGATCCA+TGG | 0.521432 | 2.1:+3083583 | None:intergenic |
| TTTACAACTTCAACTGGAAG+GGG | 0.530128 | 2.1:+3079905 | None:intergenic |
| TTAACCAAAATGTCTAAAGA+AGG | 0.530262 | 2.1:-3080704 | MS.gene36272:intron |
| TGCAGGCTGAAATTGCTATG+AGG | 0.535129 | 2.1:-3079502 | MS.gene36272:intron |
| TAAAACTAGACACCTAGGAT+AGG | 0.545011 | 2.1:+3079245 | None:intergenic |
| AAAGACTCTCTTACAGTAAG+GGG | 0.546340 | 2.1:+3080427 | None:intergenic |
| AAAAGACTCTCTTACAGTAA+GGG | 0.546930 | 2.1:+3080426 | None:intergenic |
| AAAACTAGACACCTAGGATA+GGG | 0.553770 | 2.1:+3079246 | None:intergenic |
| ACCTCATCATCAGACATTCC+AGG | 0.554754 | 2.1:+3079467 | None:intergenic |
| GTGCTCAATGCTGTCAGCGG+TGG | 0.555979 | 2.1:+3081689 | None:intergenic |
| TTTATTTGTACCACTAAAGG+AGG | 0.557917 | 2.1:+3081357 | None:intergenic |
| GCCACTGATAGACACAGCTT+GGG | 0.558179 | 2.1:+3079618 | None:intergenic |
| GCAGGCTGAAATTGCTATGA+GGG | 0.558189 | 2.1:-3079501 | MS.gene36272:intron |
| TTTAGTGCTCCTCAAGGCTG+TGG | 0.562339 | 2.1:-3081221 | MS.gene36272:CDS |
| TCGATGTTTAGTAGATGTTG+AGG | 0.562348 | 2.1:+3079287 | None:intergenic |
| GGAAGGTATGCATTGTATGC+TGG | 0.567246 | 2.1:+3079344 | None:intergenic |
| TCCAGGAAATGCACTTCTTG+AGG | 0.570132 | 2.1:-3080872 | MS.gene36272:intron |
| GAAAAGAGGAACCCTATCCT+AGG | 0.571438 | 2.1:-3079257 | MS.gene36272:CDS |
| AATTGGTTTGACGCCAGAGA+AGG | 0.573002 | 2.1:-3081565 | MS.gene36272:CDS |
| GGACCCTCCGAGTAAAGAGT+TGG | 0.574147 | 2.1:+3079323 | None:intergenic |
| TCAATTTCAGGCCATGTCGA+AGG | 0.574554 | 2.1:+3080454 | None:intergenic |
| CAACCACTTATCTATAGACT+CGG | 0.575289 | 2.1:+3081539 | None:intergenic |
| TGACAGCATTGAGCACAAGA+AGG | 0.580366 | 2.1:-3081682 | MS.gene36272:CDS |
| TGGTTTGACGCCAGAGAAGG+TGG | 0.580593 | 2.1:-3081562 | MS.gene36272:CDS |
| ATACCTTCCAACTCTTTACT+CGG | 0.582923 | 2.1:-3079330 | MS.gene36272:CDS |
| TGGACAGATGAAACTTGGGC+AGG | 0.585302 | 2.1:+3081630 | None:intergenic |
| CTTCCAACTCTTTACTCGGA+GGG | 0.585681 | 2.1:-3079326 | MS.gene36272:CDS |
| ATCTTGGACAGATGAAACTT+GGG | 0.587689 | 2.1:+3081626 | None:intergenic |
| GACAGCATTGAGCACAAGAA+GGG | 0.591677 | 2.1:-3081681 | MS.gene36272:CDS |
| GGTATGCATTGTATGCTGGC+AGG | 0.592576 | 2.1:+3079348 | None:intergenic |
| TCAAAGTGTATTATGATGCG+TGG | 0.594422 | 2.1:-3079682 | MS.gene36272:CDS |
| GGGACAAATATATACAGTCA+TGG | 0.595095 | 2.1:-3079661 | MS.gene36272:CDS |
| TGGCCGAGTCTATAGATAAG+TGG | 0.602394 | 2.1:-3081542 | MS.gene36272:CDS |
| GTTGTCTTTCCACAGCCTTG+AGG | 0.610134 | 2.1:+3081212 | None:intergenic |
| CAATCTCACTTTCACACCAT+AGG | 0.614857 | 2.1:+3081418 | None:intergenic |
| TCCTGGAATGTCTGATGATG+AGG | 0.616904 | 2.1:-3079468 | MS.gene36272:intron |
| ATTGCAGAATAAACTAAGAG+AGG | 0.621674 | 2.1:-3080899 | MS.gene36272:intron |
| GGAAGTCAAGAGCAAAGACG+AGG | 0.621761 | 2.1:+3081189 | None:intergenic |
| TCTAGTAAAACTAGACACCT+AGG | 0.633296 | 2.1:+3079240 | None:intergenic |
| CAAAGTGTATTATGATGCGT+GGG | 0.642925 | 2.1:-3079681 | MS.gene36272:CDS |
| GGCTGAAATTGCTATGAGGG+AGG | 0.647453 | 2.1:-3079498 | MS.gene36272:CDS |
| CTTGTGCTCAATGCTGTCAG+CGG | 0.649974 | 2.1:+3081686 | None:intergenic |
| ATCGTGCTGATCCTTCGACA+TGG | 0.652153 | 2.1:-3080465 | MS.gene36272:CDS |
| ATTGGATTTAGTGCTCCTCA+AGG | 0.652405 | 2.1:-3081227 | MS.gene36272:CDS |
| TGTTGAGGGTCTGATCCACT+CGG | 0.661134 | 2.1:+3079302 | None:intergenic |
| ACCCAAGCTGTGTCTATCAG+TGG | 0.661336 | 2.1:-3079619 | MS.gene36272:CDS |
| CCTCCGAGTAAAGAGTTGGA+AGG | 0.667200 | 2.1:+3079327 | None:intergenic |
| CCTTCCAACTCTTTACTCGG+AGG | 0.667853 | 2.1:-3079327 | MS.gene36272:CDS |
| GAAGTCAAGAGCAAAGACGA+GGG | 0.668490 | 2.1:+3081190 | None:intergenic |
| CTTTACTCGGAGGGTCCGAG+TGG | 0.677283 | 2.1:-3079317 | MS.gene36272:CDS |
| AAGACTCTCTTACAGTAAGG+GGG | 0.686782 | 2.1:+3080428 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAATAACTACAAA+AGG | + | chr2.1:3080444-3080463 | None:intergenic | 10.0% |
| !! | TTGTATAAAGAAATAATAAA+CGG | - | chr2.1:3083090-3083109 | MS.gene36272:intron | 10.0% |
| !!! | ATATATTATTCTATTTTTTC+TGG | - | chr2.1:3079691-3079710 | MS.gene36272:CDS | 10.0% |
| !!! | ATTGTTTTAACTATAAAAAT+AGG | + | chr2.1:3082613-3082632 | None:intergenic | 10.0% |
| !! | AAAAATAACTTATGATCATT+TGG | - | chr2.1:3082521-3082540 | MS.gene36272:intron | 15.0% |
| !! | TAACTATAAAAATAGGATTT+GGG | + | chr2.1:3082606-3082625 | None:intergenic | 15.0% |
| !! | TACAAAATGAAAAAATTATG+AGG | + | chr2.1:3081576-3081595 | None:intergenic | 15.0% |
| !! | TATTACTTAGATAAGTAAAA+GGG | - | chr2.1:3080085-3080104 | MS.gene36272:intron | 15.0% |
| !! | TTAAAATACAATCTTAAACA+TGG | - | chr2.1:3079312-3079331 | MS.gene36272:CDS | 15.0% |
| !! | TTAACTATAAAAATAGGATT+TGG | + | chr2.1:3082607-3082626 | None:intergenic | 15.0% |
| !! | TTAACTGTAAATATAACTAT+AGG | - | chr2.1:3081522-3081541 | MS.gene36272:CDS | 15.0% |
| !! | TTATTACTTAGATAAGTAAA+AGG | - | chr2.1:3080084-3080103 | MS.gene36272:intron | 15.0% |
| !!! | TATAGATGATTTTTATTTGA+CGG | - | chr2.1:3081811-3081830 | MS.gene36272:intron | 15.0% |
| !!! | TATTGTATGTTAAAATTTTC+AGG | - | chr2.1:3081771-3081790 | MS.gene36272:intron | 15.0% |
| !! | AAACCTTAAACAAATGTTTA+AGG | + | chr2.1:3080317-3080336 | None:intergenic | 20.0% |
| !! | AAATAAATTCATACAGATCT+TGG | + | chr2.1:3081224-3081243 | None:intergenic | 20.0% |
| !! | AACCTTAAACAAATGTTTAA+GGG | + | chr2.1:3080316-3080335 | None:intergenic | 20.0% |
| !! | AACTATAAAAATAGGATTTG+GGG | + | chr2.1:3082605-3082624 | None:intergenic | 20.0% |
| !! | ACTATATATGGTATATACTT+AGG | - | chr2.1:3080289-3080308 | MS.gene36272:intron | 20.0% |
| !! | AGAAGACTAAAAATACAAAT+TGG | + | chr2.1:3080041-3080060 | None:intergenic | 20.0% |
| !! | AGTAAACTAAAATTCATTCA+AGG | + | chr2.1:3080368-3080387 | None:intergenic | 20.0% |
| !! | ATATTTATTTGTACCACTAA+AGG | + | chr2.1:3081480-3081499 | None:intergenic | 20.0% |
| !! | ATGTATAGATAGAATAGAAT+AGG | - | chr2.1:3079633-3079652 | MS.gene36272:CDS | 20.0% |
| !! | CTTAAAATACAAGATGATAA+AGG | + | chr2.1:3082179-3082198 | None:intergenic | 20.0% |
| !! | GCTTATTAAACTTACATTTA+CGG | - | chr2.1:3082681-3082700 | MS.gene36272:intron | 20.0% |
| !! | GTTACAAATAATTAGAACTT+TGG | - | chr2.1:3079500-3079519 | MS.gene36272:CDS | 20.0% |
| !! | TAAATACATAAATGCCTAAT+TGG | + | chr2.1:3080981-3081000 | None:intergenic | 20.0% |
| !! | TAGAAGTAAACTAGTTAAAA+AGG | + | chr2.1:3079417-3079436 | None:intergenic | 20.0% |
| !! | TATTCTTGCCATAAAAAAAT+TGG | - | chr2.1:3082789-3082808 | MS.gene36272:intron | 20.0% |
| !! | TGAAAGAAAATTCATATCTT+TGG | - | chr2.1:3080217-3080236 | MS.gene36272:intron | 20.0% |
| !!! | ATAACTATAGGATTTTGTAA+GGG | - | chr2.1:3081534-3081553 | MS.gene36272:CDS | 20.0% |
| !!! | TATAACTATAGGATTTTGTA+AGG | - | chr2.1:3081533-3081552 | MS.gene36272:CDS | 20.0% |
| !!! | TATTTTTATTTGAAGTATCC+AGG | - | chr2.1:3082206-3082225 | MS.gene36272:intron | 20.0% |
| !!! | TCTTGTTTAGAAACTATATA+TGG | - | chr2.1:3080277-3080296 | MS.gene36272:intron | 20.0% |
| !!! | TTTTTTTTAAATTGGTCTAG+TGG | - | chr2.1:3080825-3080844 | MS.gene36272:intron | 20.0% |
| ! | AAAGAAGATGAAATTGTAGT+AGG | + | chr2.1:3079874-3079893 | None:intergenic | 25.0% |
| ! | AAGAAGATGAAATTGTAGTA+GGG | + | chr2.1:3079873-3079892 | None:intergenic | 25.0% |
| ! | ACCAAGATATGATAAAGTAA+GGG | - | chr2.1:3082244-3082263 | MS.gene36272:intron | 25.0% |
| ! | AGAGAAATAAGACCAATAAT+GGG | + | chr2.1:3080491-3080510 | None:intergenic | 25.0% |
| ! | ATGGATAGTCATTAAGATTA+AGG | - | chr2.1:3083189-3083208 | MS.gene36272:intron | 25.0% |
| ! | CGAAAGAAAAAGAATAAGAT+GGG | + | chr2.1:3081892-3081911 | None:intergenic | 25.0% |
| ! | GTCTTCTTTATCTTTGAATT+TGG | + | chr2.1:3081451-3081470 | None:intergenic | 25.0% |
| ! | GTTCTCAGATTATACTTAAT+TGG | + | chr2.1:3082011-3082030 | None:intergenic | 25.0% |
| ! | TACCAAGATATGATAAAGTA+AGG | - | chr2.1:3082243-3082262 | MS.gene36272:intron | 25.0% |
| ! | TATTTACACACATATATGAG+AGG | - | chr2.1:3081982-3082001 | MS.gene36272:intron | 25.0% |
| ! | TCGAAAGAAAAAGAATAAGA+TGG | + | chr2.1:3081893-3081912 | None:intergenic | 25.0% |
| ! | TTAACCAAAATGTCTAAAGA+AGG | - | chr2.1:3082127-3082146 | MS.gene36272:intron | 25.0% |
| ! | TTACAGTTAAAGCTTATTGA+AGG | + | chr2.1:3081512-3081531 | None:intergenic | 25.0% |
| ! | TTGTAACAAACTAACAATGA+GGG | - | chr2.1:3080940-3080959 | MS.gene36272:intron | 25.0% |
| !! | GAATCATAGATCAATTTTCA+TGG | - | chr2.1:3079281-3079300 | MS.gene36272:CDS | 25.0% |
| !! | TCTGAAATGTTAAGTTCAAT+TGG | - | chr2.1:3082449-3082468 | MS.gene36272:intron | 25.0% |
| !! | TGAAAGTATATATTCACAAG+AGG | + | chr2.1:3082822-3082841 | None:intergenic | 25.0% |
| !!! | ATGAATTTTAGTTTACTTCG+AGG | - | chr2.1:3080371-3080390 | MS.gene36272:intron | 25.0% |
| !!! | CTACTTTTTTTTATGAGTTG+AGG | - | chr2.1:3083046-3083065 | MS.gene36272:intron | 25.0% |
| !!! | TGAATTTTAGTTTACTTCGA+GGG | - | chr2.1:3080372-3080391 | MS.gene36272:intron | 25.0% |
| !!! | TGTACGTTTTAGTTTTCATA+TGG | + | chr2.1:3079544-3079563 | None:intergenic | 25.0% |
| !!! | TTTTTTATGAGTTGAGGAAT+TGG | - | chr2.1:3083052-3083071 | MS.gene36272:intron | 25.0% |
| AAAAGACTCTCTTACAGTAA+GGG | + | chr2.1:3082408-3082427 | None:intergenic | 30.0% | |
| AATTACAAAGTTTGTGATCC+TGG | - | chr2.1:3083272-3083291 | MS.gene36272:intron | 30.0% | |
| AGTTAGCAATCATACCAATT+AGG | - | chr2.1:3080964-3080983 | MS.gene36272:intron | 30.0% | |
| ATTAGATAGCTTAGAAAGTG+TGG | + | chr2.1:3079974-3079993 | None:intergenic | 30.0% | |
| ATTGCAGAATAAACTAAGAG+AGG | - | chr2.1:3081932-3081951 | MS.gene36272:intron | 30.0% | |
| ATTTCAGCCTGCAATTTAAA+CGG | + | chr2.1:3083322-3083341 | None:intergenic | 30.0% | |
| CAGAGAAATAAGACCAATAA+TGG | + | chr2.1:3080492-3080511 | None:intergenic | 30.0% | |
| CTGTATGAATTTATTTGCTC+AGG | - | chr2.1:3081228-3081247 | MS.gene36272:CDS | 30.0% | |
| GAAGGAAATACTGAATATAC+AGG | + | chr2.1:3081177-3081196 | None:intergenic | 30.0% | |
| GAGCACTAAAGAGATATATT+TGG | - | chr2.1:3079472-3079491 | MS.gene36272:CDS | 30.0% | |
| GTAAGGGAAAAAATGTTCAA+GGG | - | chr2.1:3081550-3081569 | MS.gene36272:CDS | 30.0% | |
| GTCCCTTAAACATTTGTTTA+AGG | - | chr2.1:3080311-3080330 | MS.gene36272:intron | 30.0% | |
| GTGTTTATTTGAGTATGTGT+TGG | + | chr2.1:3080851-3080870 | None:intergenic | 30.0% | |
| GTTGTAACAAACTAACAATG+AGG | - | chr2.1:3080939-3080958 | MS.gene36272:intron | 30.0% | |
| TAAAAGACTCTCTTACAGTA+AGG | + | chr2.1:3082409-3082428 | None:intergenic | 30.0% | |
| TAATTTACTGATCTGAACCT+GGG | + | chr2.1:3082963-3082982 | None:intergenic | 30.0% | |
| TACTCAAATAAACACAGACA+CGG | - | chr2.1:3080856-3080875 | MS.gene36272:intron | 30.0% | |
| TATAGATATGCACATTGAAG+AGG | + | chr2.1:3082653-3082672 | None:intergenic | 30.0% | |
| TATATATTCACAAGAGGCAA+AGG | + | chr2.1:3082816-3082835 | None:intergenic | 30.0% | |
| TCCCTTACTTTATCATATCT+TGG | + | chr2.1:3082248-3082267 | None:intergenic | 30.0% | |
| TGTAAGGGAAAAAATGTTCA+AGG | - | chr2.1:3081549-3081568 | MS.gene36272:CDS | 30.0% | |
| TTTATCTAAACCACTTCATG+TGG | - | chr2.1:3082562-3082581 | MS.gene36272:intron | 30.0% | |
| TTTATTTGTACCACTAAAGG+AGG | + | chr2.1:3081477-3081496 | None:intergenic | 30.0% | |
| TTTCTCATTCTGTTGGAATT+AGG | - | chr2.1:3080781-3080800 | MS.gene36272:intron | 30.0% | |
| ! | AAACCAATTTTGTCAAGCAA+AGG | + | chr2.1:3081255-3081274 | None:intergenic | 30.0% |
| ! | ATATCTTGGTAACTTCATCT+TGG | + | chr2.1:3082234-3082253 | None:intergenic | 30.0% |
| ! | GAAAACAGATTTTGTATACC+TGG | + | chr2.1:3081844-3081863 | None:intergenic | 30.0% |
| ! | GGGAATGAATTTGCATATTT+TGG | - | chr2.1:3082264-3082283 | MS.gene36272:intron | 30.0% |
| ! | GGTTTTTGTCGAATACAAAA+GGG | - | chr2.1:3079333-3079352 | MS.gene36272:CDS | 30.0% |
| ! | GTTTTTGTCGAATACAAAAG+GGG | - | chr2.1:3079334-3079353 | MS.gene36272:CDS | 30.0% |
| ! | TCATTTTGTATGACTCAGAT+TGG | - | chr2.1:3081586-3081605 | MS.gene36272:CDS | 30.0% |
| ! | TGATAAAGCCTAACTTTTTG+AGG | + | chr2.1:3081375-3081394 | None:intergenic | 30.0% |
| ! | TGGTTTTTGTCGAATACAAA+AGG | - | chr2.1:3079332-3079351 | MS.gene36272:CDS | 30.0% |
| ! | TGTTTAAGGTTTAATCCTGT+CGG | - | chr2.1:3080325-3080344 | MS.gene36272:intron | 30.0% |
| ! | TTAGATAGCTTAGAAAGTGT+GGG | + | chr2.1:3079973-3079992 | None:intergenic | 30.0% |
| ! | TTTTACAACTTCAACTGGAA+GGG | + | chr2.1:3082930-3082949 | None:intergenic | 30.0% |
| !! | ATTAGTCTCTGTAGGATTTT+GGG | - | chr2.1:3080395-3080414 | MS.gene36272:intron | 30.0% |
| !! | TCTCTTCTTTTAAGAATTGG+AGG | + | chr2.1:3079454-3079473 | None:intergenic | 30.0% |
| !! | TGCTCTCTTCTTTTAAGAAT+TGG | + | chr2.1:3079457-3079476 | None:intergenic | 30.0% |
| !!! | GCAAAGGACCAATTTTTTTA+TGG | + | chr2.1:3082800-3082819 | None:intergenic | 30.0% |
| !!! | TACTCTTGTTTTCCCATTAT+TGG | - | chr2.1:3080476-3080495 | MS.gene36272:CDS | 30.0% |
| !!! | TTTTAGGTTGTGTTGTTTGA+AGG | - | chr2.1:3082884-3082903 | MS.gene36272:intron | 30.0% |
| AAAGACTCTCTTACAGTAAG+GGG | + | chr2.1:3082407-3082426 | None:intergenic | 35.0% | |
| AAGAATAGGCAAAGATTACG+TGG | - | chr2.1:3079745-3079764 | MS.gene36272:intron | 35.0% | |
| AATTTACTGATCTGAACCTG+GGG | + | chr2.1:3082962-3082981 | None:intergenic | 35.0% | |
| ACAATTACAATACTTCCTGC+AGG | - | chr2.1:3081090-3081109 | MS.gene36272:intron | 35.0% | |
| ACATCGAAATAGACGAAAAG+AGG | - | chr2.1:3083560-3083579 | MS.gene36272:intron | 35.0% | |
| ACCAAAATGTCTAAAGAAGG+TGG | - | chr2.1:3082130-3082149 | MS.gene36272:intron | 35.0% | |
| ACGCATCATAATACACTTTG+AGG | + | chr2.1:3083150-3083169 | None:intergenic | 35.0% | |
| ACTATATACCAGTCTTCCTA+TGG | - | chr2.1:3081397-3081416 | MS.gene36272:CDS | 35.0% | |
| ACTCAAATAAACACAGACAC+GGG | - | chr2.1:3080857-3080876 | MS.gene36272:intron | 35.0% | |
| AGAAAAGAGAGACACAAACA+TGG | - | chr2.1:3079816-3079835 | MS.gene36272:intron | 35.0% | |
| ATACCTTCCAACTCTTTACT+CGG | - | chr2.1:3083501-3083520 | MS.gene36272:intron | 35.0% | |
| ATAGATAAGTGGTTGTCGTA+TGG | - | chr2.1:3081300-3081319 | MS.gene36272:intron | 35.0% | |
| ATCTTGGACAGATGAAACTT+GGG | + | chr2.1:3081208-3081227 | None:intergenic | 35.0% | |
| CAAAGTGTATTATGATGCGT+GGG | - | chr2.1:3083150-3083169 | MS.gene36272:intron | 35.0% | |
| CAACCACTTATCTATAGACT+CGG | + | chr2.1:3081295-3081314 | None:intergenic | 35.0% | |
| CACTATTCATAGAAGAGACA+TGG | + | chr2.1:3079361-3079380 | None:intergenic | 35.0% | |
| CGATGTTTAGTAGATGTTGA+GGG | + | chr2.1:3083546-3083565 | None:intergenic | 35.0% | |
| CTACATTACCAACTATCTTG+GGG | + | chr2.1:3082766-3082785 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr2.1:3079901-3079920 | None:intergenic | 35.0% | |
| GCTACATTACCAACTATCTT+GGG | + | chr2.1:3082767-3082786 | None:intergenic | 35.0% | |
| GGGACAAATATATACAGTCA+TGG | - | chr2.1:3083170-3083189 | MS.gene36272:intron | 35.0% | |
| GTAATTTACTGATCTGAACC+TGG | + | chr2.1:3082964-3082983 | None:intergenic | 35.0% | |
| GTCAAAGTTTCAACCGAAAA+AGG | + | chr2.1:3082103-3082122 | None:intergenic | 35.0% | |
| TAGATAAGTGGTTGTCGTAT+GGG | - | chr2.1:3081301-3081320 | MS.gene36272:intron | 35.0% | |
| TCAAAGTGTATTATGATGCG+TGG | - | chr2.1:3083149-3083168 | MS.gene36272:intron | 35.0% | |
| TCGATGTTTAGTAGATGTTG+AGG | + | chr2.1:3083547-3083566 | None:intergenic | 35.0% | |
| TGACAGAACCTCAAAAAGTT+AGG | - | chr2.1:3081364-3081383 | MS.gene36272:intron | 35.0% | |
| TGCAACAAAAAAGTCAGCAA+AGG | + | chr2.1:3079781-3079800 | None:intergenic | 35.0% | |
| TGCTACATTACCAACTATCT+TGG | + | chr2.1:3082768-3082787 | None:intergenic | 35.0% | |
| TTTACAACTTCAACTGGAAG+GGG | + | chr2.1:3082929-3082948 | None:intergenic | 35.0% | |
| ! | AAGCCATGATCTTCCTTTTT+CGG | - | chr2.1:3082087-3082106 | MS.gene36272:intron | 35.0% |
| ! | ACAGCTTTTACAACTTCAAC+TGG | + | chr2.1:3082935-3082954 | None:intergenic | 35.0% |
| ! | ACCACCTTCTTTAGACATTT+TGG | + | chr2.1:3082134-3082153 | None:intergenic | 35.0% |
| ! | ATGTTTTCTTTCCAGTATCG+TGG | - | chr2.1:3082055-3082074 | MS.gene36272:intron | 35.0% |
| ! | CACTCATTGCAAGATTTTGA+CGG | - | chr2.1:3080654-3080673 | MS.gene36272:intron | 35.0% |
| ! | CTTTTACAACTTCAACTGGA+AGG | + | chr2.1:3082931-3082950 | None:intergenic | 35.0% |
| ! | GACATTTTATGTGGAATCTC+AGG | + | chr2.1:3080900-3080919 | None:intergenic | 35.0% |
| ! | GACTTCCTTTTCCAAATGAT+TGG | - | chr2.1:3081658-3081677 | MS.gene36272:CDS | 35.0% |
| ! | GTTTAAGGTTTAATCCTGTC+GGG | - | chr2.1:3080326-3080345 | MS.gene36272:intron | 35.0% |
| !! | GAATTGAGTTGGCATCAAAT+TGG | - | chr2.1:3080528-3080547 | MS.gene36272:intron | 35.0% |
| !! | GATTTTTATTTGACGGCTGA+AGG | - | chr2.1:3081818-3081837 | MS.gene36272:intron | 35.0% |
| !! | GTTAGTTTGTTACAACCTAG+TGG | + | chr2.1:3080935-3080954 | None:intergenic | 35.0% |
| !! | TTCAAGTTGAAGCTTCAACA+AGG | + | chr2.1:3080201-3080220 | None:intergenic | 35.0% |
| !!! | GATTAGTCTCTGTAGGATTT+TGG | - | chr2.1:3080394-3080413 | MS.gene36272:intron | 35.0% |
| !!! | TTTTTTCTGGTGCAAATCTG+TGG | - | chr2.1:3079704-3079723 | MS.gene36272:CDS | 35.0% |
| AAAAGCAGACTGCAAATACC+AGG | + | chr2.1:3082333-3082352 | None:intergenic | 40.0% | |
| AAACTAAGAGAGGCTAATCC+AGG | - | chr2.1:3081942-3081961 | MS.gene36272:intron | 40.0% | |
| AAGACTCTCTTACAGTAAGG+GGG | + | chr2.1:3082406-3082425 | None:intergenic | 40.0% | |
| AAGCATACCTGCCAATCATT+TGG | + | chr2.1:3081672-3081691 | None:intergenic | 40.0% | |
| AATAGGCAAAGATTACGTGG+CGG | - | chr2.1:3079748-3079767 | MS.gene36272:intron | 40.0% | |
| ACAATACTTCCTGCAGGTAA+TGG | - | chr2.1:3081096-3081115 | MS.gene36272:intron | 40.0% | |
| ACCTGCCAATCATTTGGAAA+AGG | + | chr2.1:3081666-3081685 | None:intergenic | 40.0% | |
| AGAAGACATACCTCCTTTAG+TGG | - | chr2.1:3081464-3081483 | MS.gene36272:CDS | 40.0% | |
| AGAATAAGCTCCACATGAAG+TGG | + | chr2.1:3082575-3082594 | None:intergenic | 40.0% | |
| ATGTACCTGACTTAGAGAAG+TGG | + | chr2.1:3080008-3080027 | None:intergenic | 40.0% | |
| ATTGGATTTAGTGCTCCTCA+AGG | - | chr2.1:3081604-3081623 | MS.gene36272:CDS | 40.0% | |
| CAACCGAAAAAGGAAGATCA+TGG | + | chr2.1:3082093-3082112 | None:intergenic | 40.0% | |
| CAATCTCACTTTCACACCAT+AGG | + | chr2.1:3081416-3081435 | None:intergenic | 40.0% | |
| CGTCAAAATCTTGCAATGAG+TGG | + | chr2.1:3080656-3080675 | None:intergenic | 40.0% | |
| CTCAAATAAACACAGACACG+GGG | - | chr2.1:3080858-3080877 | MS.gene36272:intron | 40.0% | |
| CTGAAATTCCCCAAGATAGT+TGG | - | chr2.1:3082755-3082774 | MS.gene36272:intron | 40.0% | |
| GAAATTGTAGTAGGGTGCAA+TGG | + | chr2.1:3079865-3079884 | None:intergenic | 40.0% | |
| GATCCTTCTGTTAACAAGCA+CGG | - | chr2.1:3082854-3082873 | MS.gene36272:intron | 40.0% | |
| GATCTTGGACAGATGAAACT+TGG | + | chr2.1:3081209-3081228 | None:intergenic | 40.0% | |
| GCCTAAAACTTATCTCAGAG+AGG | + | chr2.1:3080179-3080198 | None:intergenic | 40.0% | |
| GCTACACTTTCTCATTCTGT+TGG | - | chr2.1:3080774-3080793 | MS.gene36272:intron | 40.0% | |
| GGACCTTTGCTTGACAAAAT+TGG | - | chr2.1:3081249-3081268 | MS.gene36272:intron | 40.0% | |
| GTTGCTAATGATGAATTGCC+TGG | - | chr2.1:3082312-3082331 | MS.gene36272:intron | 40.0% | |
| TCGAGATGACAAAGTGTGTT+TGG | - | chr2.1:3081909-3081928 | MS.gene36272:intron | 40.0% | |
| TGTACCTGACTTAGAGAAGT+GGG | + | chr2.1:3080007-3080026 | None:intergenic | 40.0% | |
| TTTGAATTTGGCCTGATGCT+GGG | + | chr2.1:3081439-3081458 | None:intergenic | 40.0% | |
| ! | CAAGCACGGATGATACTTTT+AGG | - | chr2.1:3082868-3082887 | MS.gene36272:intron | 40.0% |
| ! | TCCTTTTCCAAATGATTGGC+AGG | - | chr2.1:3081662-3081681 | MS.gene36272:CDS | 40.0% |
| ! | TGGTATTTGCAGTCTGCTTT+TGG | - | chr2.1:3082332-3082351 | MS.gene36272:intron | 40.0% |
| !! | ATTTTGGGTCTGTGGGATTT+AGG | - | chr2.1:3080410-3080429 | MS.gene36272:intron | 40.0% |
| !! | TATTTGCAGTCTGCTTTTGG+TGG | - | chr2.1:3082335-3082354 | MS.gene36272:intron | 40.0% |
| !!! | GCCTCTCTGAGATAAGTTTT+AGG | - | chr2.1:3080175-3080194 | MS.gene36272:intron | 40.0% |
| AAATAAACACAGACACGGGG+AGG | - | chr2.1:3080861-3080880 | MS.gene36272:intron | 45.0% | |
| AATAAACACAGACACGGGGA+GGG | - | chr2.1:3080862-3080881 | MS.gene36272:intron | 45.0% | |
| ACAGGCTTCTGTGCTATATG+TGG | + | chr2.1:3080750-3080769 | None:intergenic | 45.0% | |
| ACCTCATCATCAGACATTCC+AGG | + | chr2.1:3083367-3083386 | None:intergenic | 45.0% | |
| CATCGAGCCGTTTAAATTGC+AGG | - | chr2.1:3083312-3083331 | MS.gene36272:intron | 45.0% | |
| CATGAACTTCCATTACCTGC+AGG | + | chr2.1:3081108-3081127 | None:intergenic | 45.0% | |
| CTTCCAACTCTTTACTCGGA+GGG | - | chr2.1:3083505-3083524 | MS.gene36272:intron | 45.0% | |
| CTTTCACACCATAGGAAGAC+TGG | + | chr2.1:3081408-3081427 | None:intergenic | 45.0% | |
| CTTTGAATTTGGCCTGATGC+TGG | + | chr2.1:3081440-3081459 | None:intergenic | 45.0% | |
| CTTTGCCTATTCTTGCTCTC+TGG | + | chr2.1:3079739-3079758 | None:intergenic | 45.0% | |
| GAAAAGAGGAACCCTATCCT+AGG | - | chr2.1:3083574-3083593 | MS.gene36272:intron | 45.0% | |
| GAAGTCAAGAGCAAAGACGA+GGG | + | chr2.1:3081644-3081663 | None:intergenic | 45.0% | |
| GATGCATGGATGTTACAACC+AGG | + | chr2.1:3083293-3083312 | None:intergenic | 45.0% | |
| GCAGGCTGAAATTGCTATGA+GGG | - | chr2.1:3083330-3083349 | MS.gene36272:intron | 45.0% | |
| GGTAACTTCATCTTGGTACC+TGG | + | chr2.1:3082227-3082246 | None:intergenic | 45.0% | |
| TCAATTTCAGGCCATGTCGA+AGG | + | chr2.1:3082380-3082399 | None:intergenic | 45.0% | |
| TCATTGCTTGTGCTCTGTTC+AGG | - | chr2.1:3083438-3083457 | MS.gene36272:intron | 45.0% | |
| TCCAGGAAATGCACTTCTTG+AGG | - | chr2.1:3081959-3081978 | MS.gene36272:intron | 45.0% | |
| TCGACATGGCCTGAAATTGA+AGG | - | chr2.1:3082380-3082399 | MS.gene36272:intron | 45.0% | |
| TGATGCCAACTCAATTCACG+CGG | + | chr2.1:3080525-3080544 | None:intergenic | 45.0% | |
| TGCAGGCTGAAATTGCTATG+AGG | - | chr2.1:3083329-3083348 | MS.gene36272:intron | 45.0% | |
| TGGCCGAGTCTATAGATAAG+TGG | - | chr2.1:3081289-3081308 | MS.gene36272:intron | 45.0% | |
| TGTAAAAGCTGTTGATCCCC+AGG | - | chr2.1:3082943-3082962 | MS.gene36272:intron | 45.0% | |
| TTAAACGGCTCGATGATGCA+TGG | + | chr2.1:3083307-3083326 | None:intergenic | 45.0% | |
| TTCCAGCATTTCCACGATAC+TGG | + | chr2.1:3082069-3082088 | None:intergenic | 45.0% | |
| TTCCAGTATCGTGGAAATGC+TGG | - | chr2.1:3082064-3082083 | MS.gene36272:intron | 45.0% | |
| TTCTACCGCGTGAATTGAGT+TGG | - | chr2.1:3080517-3080536 | MS.gene36272:intron | 45.0% | |
| TTCTGGTGCAAATCTGTGGT+TGG | - | chr2.1:3079708-3079727 | MS.gene36272:intron | 45.0% | |
| TTGTTTGAAGGCTGGATGCT+TGG | - | chr2.1:3082896-3082915 | MS.gene36272:intron | 45.0% | |
| ! | ACCTCAAGAAGTGCATTTCC+TGG | + | chr2.1:3081963-3081982 | None:intergenic | 45.0% |
| ! | ATCAAATTGGTCTGACCTGC+CGG | - | chr2.1:3080541-3080560 | MS.gene36272:intron | 45.0% |
| ! | CATCCGTGCTTGTTAACAGA+AGG | + | chr2.1:3082860-3082879 | None:intergenic | 45.0% |
| ! | CCAAAGGTTCTGATTGAGGA+GGG | + | chr2.1:3080698-3080717 | None:intergenic | 45.0% |
| ! | GACAGCATTGAGCACAAGAA+GGG | - | chr2.1:3081150-3081169 | MS.gene36272:intron | 45.0% |
| ! | GGAAGGTATGCATTGTATGC+TGG | + | chr2.1:3083490-3083509 | None:intergenic | 45.0% |
| ! | GTCTCCAAAGGTTCTGATTG+AGG | + | chr2.1:3080702-3080721 | None:intergenic | 45.0% |
| ! | GTGCAAATCTGTGGTTGGTT+GGG | - | chr2.1:3079713-3079732 | MS.gene36272:intron | 45.0% |
| ! | TCCAAAGGTTCTGATTGAGG+AGG | + | chr2.1:3080699-3080718 | None:intergenic | 45.0% |
| ! | TCCTGGAATGTCTGATGATG+AGG | - | chr2.1:3083363-3083382 | MS.gene36272:intron | 45.0% |
| ! | TGACAGCATTGAGCACAAGA+AGG | - | chr2.1:3081149-3081168 | MS.gene36272:intron | 45.0% |
| ! | TGAGAAAGTGTAGCAGCAAC+AGG | + | chr2.1:3080768-3080787 | None:intergenic | 45.0% |
| ! | TGGTTTCAGTGGTGGTGAAA+GGG | + | chr2.1:3080621-3080640 | None:intergenic | 45.0% |
| !! | AATTGGTTTGACGCCAGAGA+AGG | - | chr2.1:3081266-3081285 | MS.gene36272:intron | 45.0% |
| !! | AGGTTGTGTTGTTTGAAGGC+TGG | - | chr2.1:3082888-3082907 | MS.gene36272:intron | 45.0% |
| !! | CTGCAGGTAATGGAAGTTCA+TGG | - | chr2.1:3081106-3081125 | MS.gene36272:intron | 45.0% |
| !! | CTGTAGGATTTTGGGTCTGT+GGG | - | chr2.1:3080403-3080422 | MS.gene36272:intron | 45.0% |
| !! | TCTGTAGGATTTTGGGTCTG+TGG | - | chr2.1:3080402-3080421 | MS.gene36272:intron | 45.0% |
| !! | TTCGAGGGATTAGTCTCTGT+AGG | - | chr2.1:3080387-3080406 | MS.gene36272:intron | 45.0% |
| !!! | ATCATTTTTTTTTTTTAAAT+TGG | - | chr2.1:3080817-3080836 | MS.gene36272:intron | 5.0% |
| AAGTGAGATTGCCCAGCATC+AGG | - | chr2.1:3081425-3081444 | MS.gene36272:CDS | 50.0% | |
| ACCACTTGTGAACTGCCATC+CGG | + | chr2.1:3080563-3080582 | None:intergenic | 50.0% | |
| ACCCAAGCTGTGTCTATCAG+TGG | - | chr2.1:3083212-3083231 | MS.gene36272:intron | 50.0% | |
| ATAAACACAGACACGGGGAG+GGG | - | chr2.1:3080863-3080882 | MS.gene36272:intron | 50.0% | |
| ATCCTCTCATGAACGCAGTG+CGG | - | chr2.1:3081006-3081025 | MS.gene36272:intron | 50.0% | |
| CACACCCACTTCTCTAAGTC+AGG | - | chr2.1:3080000-3080019 | MS.gene36272:intron | 50.0% | |
| CCCTCCTCAATCAGAACCTT+TGG | - | chr2.1:3080695-3080714 | MS.gene36272:intron | 50.0% | |
| CCTCCGAGTAAAGAGTTGGA+AGG | + | chr2.1:3083507-3083526 | None:intergenic | 50.0% | |
| CCTTCCAACTCTTTACTCGG+AGG | - | chr2.1:3083504-3083523 | MS.gene36272:intron | 50.0% | |
| CTTGTGCTCAATGCTGTCAG+CGG | + | chr2.1:3081148-3081167 | None:intergenic | 50.0% | |
| GAAACTTGGGCAGGTGATGA+AGG | + | chr2.1:3081195-3081214 | None:intergenic | 50.0% | |
| GAAATTGCTATGAGGGAGGC+AGG | - | chr2.1:3083337-3083356 | MS.gene36272:intron | 50.0% | |
| GCAATGAGTGGTTCACTGTC+CGG | + | chr2.1:3080644-3080663 | None:intergenic | 50.0% | |
| GCCACTGATAGACACAGCTT+GGG | + | chr2.1:3083216-3083235 | None:intergenic | 50.0% | |
| GGAAGTCAAGAGCAAAGACG+AGG | + | chr2.1:3081645-3081664 | None:intergenic | 50.0% | |
| GGCTGAAATTGCTATGAGGG+AGG | - | chr2.1:3083333-3083352 | MS.gene36272:intron | 50.0% | |
| GGTATGCATTGTATGCTGGC+AGG | + | chr2.1:3083486-3083505 | None:intergenic | 50.0% | |
| GGTGCAAATCTGTGGTTGGT+TGG | - | chr2.1:3079712-3079731 | MS.gene36272:intron | 50.0% | |
| GTAAGGGGGCCTTCAATTTC+AGG | + | chr2.1:3082392-3082411 | None:intergenic | 50.0% | |
| GTTGTCTTTCCACAGCCTTG+AGG | + | chr2.1:3081622-3081641 | None:intergenic | 50.0% | |
| TGGACAGATGAAACTTGGGC+AGG | + | chr2.1:3081204-3081223 | None:intergenic | 50.0% | |
| TGTTGAGGGTCTGATCCACT+CGG | + | chr2.1:3083532-3083551 | None:intergenic | 50.0% | |
| TTATTTGACGGCTGAAGGCC+AGG | - | chr2.1:3081823-3081842 | MS.gene36272:intron | 50.0% | |
| TTCACCACCACTGAAACCAC+CGG | - | chr2.1:3080622-3080641 | MS.gene36272:intron | 50.0% | |
| TTGGGCCAGAGAGCAAGAAT+AGG | - | chr2.1:3079731-3079750 | MS.gene36272:intron | 50.0% | |
| TTTAGTGCTCCTCAAGGCTG+TGG | - | chr2.1:3081610-3081629 | MS.gene36272:CDS | 50.0% | |
| ! | AGAACCTTTGGAGACCACCT+TGG | - | chr2.1:3080707-3080726 | MS.gene36272:CDS | 50.0% |
| ! | ATCGTGCTGATCCTTCGACA+TGG | - | chr2.1:3082366-3082385 | MS.gene36272:intron | 50.0% |
| ! | CGCTGCGAGGACATTTTATG+TGG | + | chr2.1:3080909-3080928 | None:intergenic | 50.0% |
| ! | GAACCTTTGGAGACCACCTT+GGG | - | chr2.1:3080708-3080727 | MS.gene36272:CDS | 50.0% |
| ! | GTGGTTTCAGTGGTGGTGAA+AGG | + | chr2.1:3080622-3080641 | None:intergenic | 50.0% |
| !! | ATTTTGACGGCTAGTCCCAC+CGG | - | chr2.1:3080667-3080686 | MS.gene36272:intron | 50.0% |
| !! | CAGTCTGCTTTTGGTGGAAG+AGG | - | chr2.1:3082341-3082360 | MS.gene36272:intron | 50.0% |
| AACCTAGTGGTTTCGCTGCG+AGG | + | chr2.1:3080922-3080941 | None:intergenic | 55.0% | |
| ATAGACTCGGCCACCTTCTC+TGG | + | chr2.1:3081282-3081301 | None:intergenic | 55.0% | |
| ATGAGTGGTTCACTGTCCGG+TGG | + | chr2.1:3080641-3080660 | None:intergenic | 55.0% | |
| CACTTTCATACGCACCCGAC+AGG | + | chr2.1:3080343-3080362 | None:intergenic | 55.0% | |
| CGCCACTGATAGACACAGCT+TGG | + | chr2.1:3083217-3083236 | None:intergenic | 55.0% | |
| CTGATTGAGGAGGGACTGTC+CGG | + | chr2.1:3080689-3080708 | None:intergenic | 55.0% | |
| GATGAGGTATGTCGCTCGCA+CGG | - | chr2.1:3083379-3083398 | MS.gene36272:intron | 55.0% | |
| GGACCCTCCGAGTAAAGAGT+TGG | + | chr2.1:3083511-3083530 | None:intergenic | 55.0% | |
| TAAACACAGACACGGGGAGG+GGG | - | chr2.1:3080864-3080883 | MS.gene36272:intron | 55.0% | |
| TATCAGTGGCGCTTGCAGGT+AGG | - | chr2.1:3083226-3083245 | MS.gene36272:intron | 55.0% | |
| TCACTGTCCGGTGGTTTCAG+TGG | + | chr2.1:3080632-3080651 | None:intergenic | 55.0% | |
| TGGTTTGACGCCAGAGAAGG+TGG | - | chr2.1:3081269-3081288 | MS.gene36272:intron | 55.0% | |
| TGTCTATCAGTGGCGCTTGC+AGG | - | chr2.1:3083222-3083241 | MS.gene36272:intron | 55.0% | |
| ! | AATTGGTCTGACCTGCCGGA+TGG | - | chr2.1:3080545-3080564 | MS.gene36272:intron | 55.0% |
| ACGCCCAAGGTGGTCTCCAA+AGG | + | chr2.1:3080714-3080733 | None:intergenic | 60.0% | |
| ATGAGGGAGGCAGGCAATCC+TGG | - | chr2.1:3083346-3083365 | MS.gene36272:intron | 60.0% | |
| ATTGAGGAGGGACTGTCCGG+TGG | + | chr2.1:3080686-3080705 | None:intergenic | 60.0% | |
| CTGTCCGGTGGTTTCAGTGG+TGG | + | chr2.1:3080629-3080648 | None:intergenic | 60.0% | |
| CTTGTGAACTGCCATCCGGC+AGG | + | chr2.1:3080559-3080578 | None:intergenic | 60.0% | |
| CTTTACTCGGAGGGTCCGAG+TGG | - | chr2.1:3083514-3083533 | MS.gene36272:intron | 60.0% | |
| GACCGCACTGCGTTCATGAG+AGG | + | chr2.1:3081011-3081030 | None:intergenic | 60.0% | |
| GCCGGATGGCAGTTCACAAG+TGG | - | chr2.1:3080559-3080578 | MS.gene36272:intron | 60.0% | |
| GTCCTCGCAGCGAAACCACT+AGG | - | chr2.1:3080917-3080936 | MS.gene36272:intron | 60.0% | |
| GTGCTCAATGCTGTCAGCGG+TGG | + | chr2.1:3081145-3081164 | None:intergenic | 60.0% | |
| TTGAGGAGGGACTGTCCGGT+GGG | + | chr2.1:3080685-3080704 | None:intergenic | 60.0% | |
| TTTGGAGACCACCTTGGGCG+TGG | - | chr2.1:3080713-3080732 | MS.gene36272:CDS | 60.0% | |
| ACCACCTTGGGCGTGGTGGT+TGG | - | chr2.1:3080720-3080739 | MS.gene36272:CDS | 65.0% | |
| AGACACGGGGAGGGGGAATG+TGG | - | chr2.1:3080871-3080890 | MS.gene36272:intron | 65.0% | |
| CTCTCCAACCACCACGCCCA+AGG | + | chr2.1:3080727-3080746 | None:intergenic | 65.0% | |
| TCCAACCACCACGCCCAAGG+TGG | + | chr2.1:3080724-3080743 | None:intergenic | 65.0% | |
| GGAGACCACCTTGGGCGTGG+TGG | - | chr2.1:3080716-3080735 | MS.gene36272:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3079250 | 3083603 | 3079250 | ID=MS.gene36272 |
| chr2.1 | mRNA | 3079250 | 3083603 | 3079250 | ID=MS.gene36272.t1;Parent=MS.gene36272 |
| chr2.1 | exon | 3083594 | 3083603 | 3083594 | ID=MS.gene36272.t1.exon1;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3083594 | 3083603 | 3083594 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3081368 | 3081741 | 3081368 | ID=MS.gene36272.t1.exon2;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3081368 | 3081741 | 3081368 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3081170 | 3081249 | 3081170 | ID=MS.gene36272.t1.exon3;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3081170 | 3081249 | 3081170 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3081009 | 3081060 | 3081009 | ID=MS.gene36272.t1.exon4;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3081009 | 3081060 | 3081009 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3080873 | 3080914 | 3080873 | ID=MS.gene36272.t1.exon5;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3080873 | 3080914 | 3080873 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3080705 | 3080783 | 3080705 | ID=MS.gene36272.t1.exon6;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3080705 | 3080783 | 3080705 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3080594 | 3080625 | 3080594 | ID=MS.gene36272.t1.exon7;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3080594 | 3080625 | 3080594 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3080441 | 3080509 | 3080441 | ID=MS.gene36272.t1.exon8;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3080441 | 3080509 | 3080441 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3079889 | 3079963 | 3079889 | ID=MS.gene36272.t1.exon9;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3079889 | 3079963 | 3079889 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3079610 | 3079726 | 3079610 | ID=MS.gene36272.t1.exon10;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3079610 | 3079726 | 3079610 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3079469 | 3079519 | 3079469 | ID=MS.gene36272.t1.exon11;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3079469 | 3079519 | 3079469 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| chr2.1 | exon | 3079250 | 3079393 | 3079250 | ID=MS.gene36272.t1.exon12;Parent=MS.gene36272.t1 |
| chr2.1 | CDS | 3079250 | 3079393 | 3079250 | ID=cds.MS.gene36272.t1;Parent=MS.gene36272.t1 |
| Gene Sequence |
| Protein sequence |
