AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36343

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36343.t1 MTR_2g101360 96.243 559 16 2 2 560 1 554 0.0 1118
MS.gene36343.t1 MTR_8g103380 51.049 429 210 0 146 574 22 450 1.04e-164 476
MS.gene36343.t1 MTR_8g103380 51.408 426 207 0 146 571 22 447 2.71e-164 477
MS.gene36343.t1 MTR_8g103380 51.408 426 207 0 146 571 195 620 1.76e-162 479
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36343.t1 AT2G32230 62.978 497 182 2 65 559 74 570 0.0 613
MS.gene36343.t1 AT2G32230 62.978 497 182 2 65 559 74 570 0.0 613
MS.gene36343.t1 AT4G21900 47.808 479 233 7 95 557 96 573 3.05e-151 447
MS.gene36343.t1 AT2G16650 46.061 495 250 7 79 557 21 514 2.06e-141 420
MS.gene36343.t1 AT2G16650 47.115 416 204 6 157 557 1 415 2.37e-120 362
MS.gene36343.t1 AT5G60430 46.957 115 52 2 298 403 1 115 1.25e-18 83.6
MS.gene36343.t1 AT5G60430 46.957 115 52 2 298 403 1 115 1.25e-18 83.6
MS.gene36343.t1 AT5G60430 46.957 115 52 2 298 403 1 115 1.25e-18 83.6
MS.gene36343.t1 AT5G60430 46.957 115 52 2 298 403 1 115 1.25e-18 83.6

Find 134 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTTGTTATTTGGATTC+TGG 0.133755 2.2:+2173540 None:intergenic
TCTATAAGTCTCTTGTTATT+TGG 0.154869 2.2:+2173533 None:intergenic
TGCTGCCTCGTTGTCTAAAT+TGG 0.177237 2.2:-2174074 MS.gene36343:CDS
GGATGAGCTTTGTGCACTTT+TGG 0.232727 2.2:-2174428 MS.gene36343:CDS
CTTTGGTTGAAAGCTTGATT+GGG 0.252099 2.2:+2174926 None:intergenic
ACAAGAGACTTATAGAAAAT+TGG 0.268817 2.2:-2173526 MS.gene36343:CDS
CCGTTTGATGCTGTTGTTGA+TGG 0.284303 2.2:-2173779 MS.gene36343:CDS
GCTTTGGTTGAAAGCTTGAT+TGG 0.290063 2.2:+2174925 None:intergenic
TACCTTTGTACTGTTCAAAA+TGG 0.298977 2.2:-2174745 MS.gene36343:CDS
TCGTTACTCACTAGTTATTC+AGG 0.304371 2.2:-2172213 MS.gene36343:intron
TCTCTTGTTATTTGGATTCT+GGG 0.316392 2.2:+2173541 None:intergenic
TGGTTGATTGAGTGTTGTTT+TGG 0.318780 2.2:+2174956 None:intergenic
TTGCATGTTAATCGAGTAAC+TGG 0.333611 2.2:-2173572 MS.gene36343:CDS
GCGCCAAAGTTGAGGTCTTA+TGG 0.345312 2.2:-2174544 MS.gene36343:CDS
CAGGGAGGTGGTGGATGGCA+TGG 0.356400 2.2:-2174223 MS.gene36343:CDS
ATGAGATATTGCATCGGTTA+AGG 0.358930 2.2:-2174369 MS.gene36343:CDS
GTGGATGGCATGGGCAAGGG+TGG 0.373874 2.2:-2174213 MS.gene36343:CDS
TGCTGAATTCAGCTTTAAAC+AGG 0.375340 2.2:-2173732 MS.gene36343:intron
GTTAGTGTTGAGGTTAAGAA+TGG 0.378907 2.2:-2174403 MS.gene36343:CDS
GGTGGTGGATGGCATGGGCA+AGG 0.379418 2.2:-2174217 MS.gene36343:CDS
AGCCATTTCCTTGGGATGTC+AGG 0.384390 2.2:+2171890 None:intergenic
TCTTATGGTCCGGCTTTGTA+TGG 0.393870 2.2:-2174529 MS.gene36343:CDS
TCGGAATATGCGATGAAGAT+TGG 0.397404 2.2:-2174289 MS.gene36343:CDS
TTGAGATAAAGTGTTGTTGA+TGG 0.397417 2.2:+2174990 None:intergenic
TTAGTAAACGTCGCTTCATT+CGG 0.397583 2.2:+2174646 None:intergenic
GGACCACTTGTTCCAACTAC+TGG 0.399469 2.2:-2173186 MS.gene36343:CDS
CGGAATATGCGATGAAGATT+GGG 0.405748 2.2:-2174288 MS.gene36343:CDS
TGGCATGGGCAAGGGTGGCT+TGG 0.407241 2.2:-2174208 MS.gene36343:CDS
AAATGATTGAAGTTTGCTTT+AGG 0.407488 2.2:+2174037 None:intergenic
TTGGAAGAAGAAGAGAGAAA+TGG 0.413457 2.2:+2175069 None:intergenic
ATAAGTGGCAATCTCTTTGA+AGG 0.415790 2.2:+2173599 None:intergenic
TGAGATATTGCATCGGTTAA+GGG 0.423689 2.2:-2174368 MS.gene36343:CDS
TGGAAGAAGAAGAGAGAAAT+GGG 0.424848 2.2:+2175070 None:intergenic
GTGTTTGAGAGAGAAAGAAT+TGG 0.435587 2.2:+2175050 None:intergenic
GGGATTGTGCAGGGAGGTGG+TGG 0.436124 2.2:-2174232 MS.gene36343:CDS
TGAAGATTGGGAAGAGGGAG+TGG 0.436376 2.2:-2174276 MS.gene36343:CDS
TTGTTATTTGGATTCTGGGC+AGG 0.440934 2.2:+2173545 None:intergenic
GTGGTGGATGGCATGGGCAA+GGG 0.442264 2.2:-2174216 MS.gene36343:CDS
GGGCAAGGGTGGCTTGGAAG+TGG 0.447202 2.2:-2174202 MS.gene36343:CDS
CAAGGGATTGTGCAGGGAGG+TGG 0.450426 2.2:-2174235 MS.gene36343:CDS
TATTATAATGATCAAGATTG+AGG 0.457429 2.2:+2174776 None:intergenic
CCATCAACAACAGCATCAAA+CGG 0.459647 2.2:+2173779 None:intergenic
ATCCTGACATCCCAAGGAAA+TGG 0.460436 2.2:-2171892 MS.gene36343:CDS
AACAACTCAAAAGCCATCTC+AGG 0.464122 2.2:+2174592 None:intergenic
CGTTGAAGGTTATTGAGGAT+TGG 0.464233 2.2:-2174318 MS.gene36343:CDS
TGCGATGAAGATTGGGAAGA+GGG 0.465382 2.2:-2174281 MS.gene36343:CDS
GATGATGATATGATTGAGTC+AGG 0.470508 2.2:-2174466 MS.gene36343:CDS
CAGAAGTGGCTTGAAAAGAA+TGG 0.472505 2.2:-2173803 MS.gene36343:CDS
TTGTGCAGGGAGGTGGTGGA+TGG 0.476281 2.2:-2174228 MS.gene36343:CDS
GTTCTTTATGCTACTCCCCA+TGG 0.482926 2.2:-2173491 MS.gene36343:CDS
TATGATTGAGTCAGGTGTTA+TGG 0.484359 2.2:-2174458 MS.gene36343:CDS
AGGGAGGTGGTGGATGGCAT+GGG 0.484546 2.2:-2174222 MS.gene36343:CDS
AAAGTTGAGGTCTTATGGTC+CGG 0.488092 2.2:-2174539 MS.gene36343:CDS
AAAGCTGAATTCAGCAATGT+TGG 0.488932 2.2:+2173739 None:intergenic
GTGACACATAGCCATTTCCT+TGG 0.489934 2.2:+2171881 None:intergenic
GTTAAGGGCTGTGGTTAGAC+AGG 0.490181 2.2:-2174353 MS.gene36343:CDS
CAGTGCTTGAAGAACATCAC+TGG 0.494248 2.2:+2174834 None:intergenic
ATGCGATGAAGATTGGGAAG+AGG 0.497007 2.2:-2174282 MS.gene36343:CDS
AGTAACGAGGAGGTAGAACT+AGG 0.498037 2.2:+2172228 None:intergenic
ATTATAATGATCAAGATTGA+GGG 0.499039 2.2:+2174777 None:intergenic
AAGAAGAGAGAAATGGGCGA+TGG 0.500008 2.2:+2175076 None:intergenic
CATCAACAACAGCATCAAAC+GGG 0.500421 2.2:+2173780 None:intergenic
TCCGCGTGTGTTGGCACTTG+AGG 0.504349 2.2:-2171815 None:intergenic
GGACCATAAGACCTCAACTT+TGG 0.505724 2.2:+2174541 None:intergenic
CCAATCGTCATTTGAACCAT+GGG 0.506713 2.2:+2173475 None:intergenic
GGCAAGGGTGGCTTGGAAGT+GGG 0.506948 2.2:-2174201 MS.gene36343:CDS
TGGCACATGCCAACTTCCAT+TGG 0.507835 2.2:+2171931 None:intergenic
TGACACATAGCCATTTCCTT+GGG 0.508151 2.2:+2171882 None:intergenic
GTCGACGTTGAAGGTTATTG+AGG 0.509870 2.2:-2174323 MS.gene36343:CDS
CCCATGGTTCAAATGACGAT+TGG 0.513081 2.2:-2173475 MS.gene36343:intron
GGATGCTATGAAAGCTTATG+AGG 0.516502 2.2:-2174491 MS.gene36343:CDS
GGTGAGTTTGGCCATTGAAA+CGG 0.517685 2.2:+2175119 None:intergenic
TATTGAGGATTGGTTTGAGT+CGG 0.518230 2.2:-2174308 MS.gene36343:CDS
GGTGTCTGAGTCGACGTTGA+AGG 0.518996 2.2:-2174332 MS.gene36343:CDS
ATTGCATCGGTTAAGGGCTG+TGG 0.519630 2.2:-2174362 MS.gene36343:CDS
TTAACATGCAAAATTATAAG+TGG 0.523620 2.2:+2173584 None:intergenic
TTTGGTTGAAAGCTTGATTG+GGG 0.523742 2.2:+2174927 None:intergenic
GTCAGGTGTTATGGCGGAGG+AGG 0.524318 2.2:-2174449 MS.gene36343:CDS
TGCTAGGTTAGCTGCTGCTA+AGG 0.526357 2.2:-2174620 MS.gene36343:CDS
AGATAAAGTGTTGTTGATGG+TGG 0.527866 2.2:+2174993 None:intergenic
GGTGGCTTGGAAGTGGGCAA+TGG 0.531608 2.2:-2174195 MS.gene36343:CDS
TAAAGTGTTGTTGATGGTGG+TGG 0.532968 2.2:+2174996 None:intergenic
AGAAGAGAGAAATGGGCGAT+GGG 0.533528 2.2:+2175077 None:intergenic
TGAGGTTAAGAATGGAGATA+AGG 0.533800 2.2:-2174395 MS.gene36343:CDS
GCTTGGAAGTGGGCAATGGA+AGG 0.536828 2.2:-2174191 MS.gene36343:CDS
GACCACTTGTTCCAACTACT+GGG 0.539832 2.2:-2173185 MS.gene36343:CDS
TGGTTGAAAGCTTGATTGGG+GGG 0.540239 2.2:+2174929 None:intergenic
TTGAAGCAGATGAAGAGAGT+AGG 0.542479 2.2:-2174571 MS.gene36343:CDS
GCTGCGTGGAACCGTTTCAA+TGG 0.544560 2.2:-2175130 MS.gene36343:CDS
AATAAGACAAGGGATTGTGC+AGG 0.544813 2.2:-2174242 MS.gene36343:CDS
TTTCATTTGGGTCTTCAAAG+AGG 0.545277 2.2:-2174709 MS.gene36343:CDS
AAGACAAATGTAGATGAGGA+TGG 0.546053 2.2:-2174163 MS.gene36343:CDS
TTGGTTGAAAGCTTGATTGG+GGG 0.546819 2.2:+2174928 None:intergenic
GAAGAGGGAGTGGGATGATG+AGG 0.550396 2.2:-2174266 MS.gene36343:CDS
TTTGACAAATGATGAGATGA+GGG 0.554718 2.2:-2173207 MS.gene36343:CDS
ACCAATCGTCATTTGAACCA+TGG 0.558571 2.2:+2173474 None:intergenic
GTTGTTGATGGTGCAAATGT+AGG 0.559189 2.2:-2173767 MS.gene36343:CDS
AGGAATCAGCCAATGGAAGT+TGG 0.560803 2.2:-2171940 MS.gene36343:CDS
GAAGATTGGGAAGAGGGAGT+GGG 0.563676 2.2:-2174275 MS.gene36343:CDS
AGCCCAGTAGTTGGAACAAG+TGG 0.566139 2.2:+2173183 None:intergenic
CGACGTTTACTAATGCTGCT+AGG 0.568299 2.2:-2174636 MS.gene36343:CDS
TGAGTCAGGTGTTATGGCGG+AGG 0.572377 2.2:-2174452 MS.gene36343:CDS
TAGGTTAGCTGCTGCTAAGG+AGG 0.576374 2.2:-2174617 MS.gene36343:CDS
TAGGAATTGCGCCAAAGTTG+AGG 0.576806 2.2:-2174552 MS.gene36343:CDS
TGTACTGTTCAAAATGGTGA+TGG 0.578769 2.2:-2174739 MS.gene36343:CDS
ACATCAACCTCCGCGTGTGT+TGG 0.581274 2.2:-2171824 MS.gene36343:CDS
TAAGTGGCAATCTCTTTGAA+GGG 0.596304 2.2:+2173600 None:intergenic
CGAGTATCAGTCTCAACTCG+TGG 0.596651 2.2:-2172257 MS.gene36343:CDS
GGATCATCGCTAGCTACAGT+TGG 0.598712 2.2:+2171911 None:intergenic
TGCTAAGGAGGATCCTGAGA+TGG 0.602179 2.2:-2174605 MS.gene36343:CDS
TGATGGTGCAAATGTAGGAC+TGG 0.612626 2.2:-2173762 MS.gene36343:CDS
TGTTAAGACAAATGTAGATG+AGG 0.614648 2.2:-2174167 MS.gene36343:CDS
TTATAATGATCAAGATTGAG+GGG 0.618796 2.2:+2174778 None:intergenic
GCGATGATCCTGACATCCCA+AGG 0.622537 2.2:-2171898 MS.gene36343:CDS
GATGATGAGGTAATAAGACA+AGG 0.623008 2.2:-2174253 MS.gene36343:CDS
TCCTCAAGTGCCAACACACG+CGG 0.628331 2.2:+2171814 None:intergenic
CATGTTAATCGAGTAACTGG+TGG 0.630388 2.2:-2173569 MS.gene36343:CDS
AAGATGGAAGGAAAAGCACC+AGG 0.641941 2.2:-2173147 MS.gene36343:intron
TAACTGCAGGAATCAGCCAA+TGG 0.642190 2.2:-2171947 MS.gene36343:intron
GTAACGAGGAGGTAGAACTA+GGG 0.645913 2.2:+2172229 None:intergenic
TAGTGAACGGAACAGTGGTA+CGG 0.646460 2.2:+2175019 None:intergenic
ATGATGAGGTAATAAGACAA+GGG 0.651638 2.2:-2174252 MS.gene36343:CDS
ATAAGACAAGGGATTGTGCA+GGG 0.652590 2.2:-2174241 MS.gene36343:CDS
TTGATGGTGGTGGTAGTGAA+CGG 0.653542 2.2:+2175006 None:intergenic
GATTGAGTCAGGTGTTATGG+CGG 0.656403 2.2:-2174455 MS.gene36343:CDS
AGGTGTATGAGATATTGCAT+CGG 0.681017 2.2:-2174375 MS.gene36343:CDS
CAATCGTCATTTGAACCATG+GGG 0.695518 2.2:+2173476 None:intergenic
TCAAGTGCCAACACACGCGG+AGG 0.700374 2.2:+2171817 None:intergenic
TGAATCACAATGCTGCTGCG+TGG 0.702753 2.2:-2175144 None:intergenic
ACAAGCCAATTTAGACAACG+AGG 0.747047 2.2:+2174069 None:intergenic
GGTGGTAGTGAACGGAACAG+TGG 0.750346 2.2:+2175014 None:intergenic
AGACAAGGGATTGTGCAGGG+AGG 0.750851 2.2:-2174238 MS.gene36343:CDS
ATAACTAGTGAGTAACGAGG+AGG 0.752971 2.2:+2172218 None:intergenic
TGAATAACTAGTGAGTAACG+AGG 0.775176 2.2:+2172215 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTTTTTTTTTTTTTTT+TGG - chr2.2:2174491-2174510 MS.gene36343:CDS 10.0%
!! ATAGAAAATTGGAAAAAAAA+TGG - chr2.2:2173437-2173456 MS.gene36343:intron 15.0%
!! TAAGAAGAAAAAATTACATT+AGG + chr2.2:2173543-2173562 None:intergenic 15.0%
!! TATAGAATGTCTTATATTTA+GGG - chr2.2:2174351-2174370 MS.gene36343:CDS 15.0%
!! TTATAGAATGTCTTATATTT+AGG - chr2.2:2174350-2174369 MS.gene36343:CDS 15.0%
!!! AGAATGAATTATATTTCTAA+AGG + chr2.2:2174135-2174154 None:intergenic 15.0%
!!! ATGAAAGATGAATAATATTT+TGG - chr2.2:2174976-2174995 MS.gene36343:CDS 15.0%
!!! TGAAAGATGAATAATATTTT+GGG - chr2.2:2174977-2174996 MS.gene36343:CDS 15.0%
!!! TTTTTTTTTTTTTTTTGGTC+AGG - chr2.2:2174496-2174515 MS.gene36343:CDS 15.0%
!! ATTATAATGATCAAGATTGA+GGG + chr2.2:2172178-2172197 None:intergenic 20.0%
!! TAAAAGTTAAAAGCTGAATT+TGG - chr2.2:2172989-2173008 MS.gene36343:intron 20.0%
!! TAATCTAGAAGAATTAGTAT+AGG - chr2.2:2173093-2173112 MS.gene36343:intron 20.0%
!! TATTATAATGATCAAGATTG+AGG + chr2.2:2172179-2172198 None:intergenic 20.0%
!! TCAATCTAACTAAAATATCA+TGG + chr2.2:2173516-2173535 None:intergenic 20.0%
!! TTAACATGCAAAATTATAAG+TGG + chr2.2:2173371-2173390 None:intergenic 20.0%
!! TTAATCCTAGTAATCTAATA+TGG - chr2.2:2174066-2174085 MS.gene36343:CDS 20.0%
!!! AATGTTAATTTGTTTATTGC+AGG - chr2.2:2173684-2173703 MS.gene36343:intron 20.0%
!!! TTATTTTACATTTTCAACTC+TGG - chr2.2:2173560-2173579 MS.gene36343:CDS 20.0%
!!! TTTTTTTTGCAAAATTCCAA+CGG + chr2.2:2172079-2172098 None:intergenic 20.0%
! ACAAGAGACTTATAGAAAAT+TGG - chr2.2:2173426-2173445 MS.gene36343:intron 25.0%
! ACAATGCATTATTATATGCA+GGG + chr2.2:2174588-2174607 None:intergenic 25.0%
! AGAGAACAAGAAAATCAATT+GGG + chr2.2:2174776-2174795 None:intergenic 25.0%
! ATAATGAATGCATCTTGATA+TGG + chr2.2:2173868-2173887 None:intergenic 25.0%
! ATCAAGATGCATTCATTATA+AGG - chr2.2:2173869-2173888 MS.gene36343:intron 25.0%
! ATCATCTACTGTTTCATTAT+AGG + chr2.2:2174653-2174672 None:intergenic 25.0%
! GCATATTAAACAAAAAACTG+AGG + chr2.2:2174019-2174038 None:intergenic 25.0%
! TAGATAAGAAAAATTGACAG+TGG + chr2.2:2174185-2174204 None:intergenic 25.0%
! TAGTAATCTAATATGGAATG+AGG - chr2.2:2174073-2174092 MS.gene36343:CDS 25.0%
! TATACATTTCCAACATTGAT+AGG - chr2.2:2173594-2173613 MS.gene36343:CDS 25.0%
! TCAAGATGCATTCATTATAA+GGG - chr2.2:2173870-2173889 MS.gene36343:intron 25.0%
! TCATTCCATATTAGATTACT+AGG + chr2.2:2174074-2174093 None:intergenic 25.0%
! TCTATGAAGTTTGTAAGAAA+AGG - chr2.2:2174201-2174220 MS.gene36343:CDS 25.0%
! TGTAAATGGTCCTATAATTA+GGG - chr2.2:2174387-2174406 MS.gene36343:CDS 25.0%
! TTATAATGATCAAGATTGAG+GGG + chr2.2:2172177-2172196 None:intergenic 25.0%
! TTGTAAATGGTCCTATAATT+AGG - chr2.2:2174386-2174405 MS.gene36343:CDS 25.0%
!! AAATGATTGAAGTTTGCTTT+AGG + chr2.2:2172918-2172937 None:intergenic 25.0%
!! CTATGATAATTTAGAATACC+TGG + chr2.2:2173826-2173845 None:intergenic 25.0%
!! GTAATAATTTTATTCCCCTA+TGG + chr2.2:2173977-2173996 None:intergenic 25.0%
!! TTCTAAAGGAACTTAATTGT+AGG + chr2.2:2174121-2174140 None:intergenic 25.0%
!!! AAAAATTGGTAGTGTTATAC+GGG - chr2.2:2174289-2174308 MS.gene36343:CDS 25.0%
!!! AATTGATTTTCTTGTTCTCT+CGG - chr2.2:2174776-2174795 MS.gene36343:CDS 25.0%
!!! GAAAAATTGGTAGTGTTATA+CGG - chr2.2:2174288-2174307 MS.gene36343:CDS 25.0%
!!! GATGGAAGTTTTTTTCATTT+GGG - chr2.2:2172231-2172250 MS.gene36343:CDS 25.0%
!!! TCTATAAGTCTCTTGTTATT+TGG + chr2.2:2173422-2173441 None:intergenic 25.0%
!!! TGATGGAAGTTTTTTTCATT+TGG - chr2.2:2172230-2172249 MS.gene36343:CDS 25.0%
!!! TTTTTTTGCAAAATTCCAAC+GGG + chr2.2:2172078-2172097 None:intergenic 25.0%
AAAGCATAACCACTATACAA+AGG + chr2.2:2173045-2173064 None:intergenic 30.0%
AAAGGCAATCTACAAGTAAA+GGG + chr2.2:2173027-2173046 None:intergenic 30.0%
AACAAAAAACTGAGGACAAT+AGG + chr2.2:2174011-2174030 None:intergenic 30.0%
AGAAGAATTAGTATAGGCAT+AGG - chr2.2:2173099-2173118 MS.gene36343:intron 30.0%
ATGATGAGGTAATAAGACAA+GGG - chr2.2:2172700-2172719 MS.gene36343:intron 30.0%
ATTAATAGAAGACAACTAGC+AGG + chr2.2:2174611-2174630 None:intergenic 30.0%
CAATGCATTATTATATGCAG+GGG + chr2.2:2174587-2174606 None:intergenic 30.0%
GACAATGCATTATTATATGC+AGG + chr2.2:2174589-2174608 None:intergenic 30.0%
GAGAGAACAAGAAAATCAAT+TGG + chr2.2:2174777-2174796 None:intergenic 30.0%
GGATTAAAGTTAAGCAAACA+TGG + chr2.2:2174053-2174072 None:intergenic 30.0%
GGGAATAAAATTATTACAGC+TGG - chr2.2:2173980-2173999 MS.gene36343:intron 30.0%
GTCTATATTCCTATCAATGT+TGG + chr2.2:2173606-2173625 None:intergenic 30.0%
GTTAGGTGTTCCTATAATAA+GGG + chr2.2:2174250-2174269 None:intergenic 30.0%
TACCTTTGTACTGTTCAAAA+TGG - chr2.2:2172207-2172226 MS.gene36343:intron 30.0%
TGTTAAGACAAATGTAGATG+AGG - chr2.2:2172785-2172804 MS.gene36343:intron 30.0%
TGTTAGGTGTTCCTATAATA+AGG + chr2.2:2174251-2174270 None:intergenic 30.0%
TTCCTATAATAAGGGACAAA+GGG + chr2.2:2174242-2174261 None:intergenic 30.0%
TTTGACAAATGATGAGATGA+GGG - chr2.2:2173745-2173764 MS.gene36343:CDS 30.0%
! AATTTGTTTATTGCAGGTAC+TGG - chr2.2:2173690-2173709 MS.gene36343:intron 30.0%
! AGCAAACTTCAATCATTTTC+AGG - chr2.2:2172920-2172939 MS.gene36343:intron 30.0%
! GACAGACAAGTTTTTGTAAA+TGG - chr2.2:2174373-2174392 MS.gene36343:CDS 30.0%
! TATCAACCACATCATTTTCT+TGG + chr2.2:2174823-2174842 None:intergenic 30.0%
! TTAAAAGCTGAATTTGGTGA+TGG - chr2.2:2172995-2173014 MS.gene36343:intron 30.0%
! TTTTGACAAATGATGAGATG+AGG - chr2.2:2173744-2173763 MS.gene36343:CDS 30.0%
!! AGATTTTTGAGCAGATGTTA+AGG - chr2.2:2172271-2172290 MS.gene36343:intron 30.0%
!! ATGTTTAACTTTTGCAGAAG+TGG - chr2.2:2173135-2173154 MS.gene36343:intron 30.0%
!! GATTTTTGAGCAGATGTTAA+GGG - chr2.2:2172272-2172291 MS.gene36343:intron 30.0%
!! TCTCTTGTTATTTGGATTCT+GGG + chr2.2:2173414-2173433 None:intergenic 30.0%
!! TTGAGATAAAGTGTTGTTGA+TGG + chr2.2:2171965-2171984 None:intergenic 30.0%
!!! ATTTTAAAACCACACCATAG+GGG - chr2.2:2173960-2173979 MS.gene36343:intron 30.0%
!!! GAATTTTTAGCCTTTCTTGT+TGG - chr2.2:2174446-2174465 MS.gene36343:CDS 30.0%
!!! GATTTTAAAACCACACCATA+GGG - chr2.2:2173959-2173978 MS.gene36343:intron 30.0%
!!! TTTTTTGCAAAATTCCAACG+GGG + chr2.2:2172077-2172096 None:intergenic 30.0%
AAAATCCTTGCTTCTAGTCA+TGG + chr2.2:2173945-2173964 None:intergenic 35.0%
AAAATTGACAGTGGAGCTAA+TGG + chr2.2:2174176-2174195 None:intergenic 35.0%
AAAGCTGAATTCAGCAATGT+TGG + chr2.2:2173216-2173235 None:intergenic 35.0%
AAGACAAATGTAGATGAGGA+TGG - chr2.2:2172789-2172808 MS.gene36343:intron 35.0%
AATGGTCCTATAATTAGGGA+CGG - chr2.2:2174391-2174410 MS.gene36343:CDS 35.0%
ACCTTATAAGGGGAATAAGT+GGG - chr2.2:2174539-2174558 MS.gene36343:CDS 35.0%
AGGTGTATGAGATATTGCAT+CGG - chr2.2:2172577-2172596 MS.gene36343:intron 35.0%
AGTGTTATACGGGATAGATT+TGG - chr2.2:2174299-2174318 MS.gene36343:CDS 35.0%
ATAAGTGGCAATCTCTTTGA+AGG + chr2.2:2173356-2173375 None:intergenic 35.0%
ATAATCAAGCTACAACCAAG+CGG + chr2.2:2173306-2173325 None:intergenic 35.0%
ATGCATTCATTATAAGGGAG+AGG - chr2.2:2173875-2173894 MS.gene36343:intron 35.0%
CAAAGGCAATCTACAAGTAA+AGG + chr2.2:2173028-2173047 None:intergenic 35.0%
CTATAACCAACTGAAGACAT+AGG + chr2.2:2173072-2173091 None:intergenic 35.0%
CTTTGGTTGAAAGCTTGATT+GGG + chr2.2:2172029-2172048 None:intergenic 35.0%
GAACACCTAACAAAAATCAC+GGG - chr2.2:2174259-2174278 MS.gene36343:CDS 35.0%
GATGATGAGGTAATAAGACA+AGG - chr2.2:2172699-2172718 MS.gene36343:intron 35.0%
GATGATGATATGATTGAGTC+AGG - chr2.2:2172486-2172505 MS.gene36343:intron 35.0%
GCTAGAATTCACCTTATAAG+GGG - chr2.2:2174529-2174548 MS.gene36343:CDS 35.0%
GGAACACCTAACAAAAATCA+CGG - chr2.2:2174258-2174277 MS.gene36343:CDS 35.0%
GGCTAGAATTCACCTTATAA+GGG - chr2.2:2174528-2174547 MS.gene36343:CDS 35.0%
GGGTGAGAATAGAAAAAAGA+GGG + chr2.2:2171858-2171877 None:intergenic 35.0%
GGTGAGAATAGAAAAAAGAG+GGG + chr2.2:2171857-2171876 None:intergenic 35.0%
GTGTTTGAGAGAGAAAGAAT+TGG + chr2.2:2171905-2171924 None:intergenic 35.0%
GTTCCTATAATAAGGGACAA+AGG + chr2.2:2174243-2174262 None:intergenic 35.0%
TAAGTGGCAATCTCTTTGAA+GGG + chr2.2:2173355-2173374 None:intergenic 35.0%
TATGATTGAGTCAGGTGTTA+TGG - chr2.2:2172494-2172513 MS.gene36343:intron 35.0%
TCACGGGTATCAAGAAAAAT+TGG - chr2.2:2174275-2174294 MS.gene36343:CDS 35.0%
TCATGAAAGCAGCTACTTAA+TGG - chr2.2:2173274-2173293 MS.gene36343:intron 35.0%
TCGTTACTCACTAGTTATTC+AGG - chr2.2:2174739-2174758 MS.gene36343:CDS 35.0%
TGAATAACTAGTGAGTAACG+AGG + chr2.2:2174740-2174759 None:intergenic 35.0%
TGAGGTTAAGAATGGAGATA+AGG - chr2.2:2172557-2172576 MS.gene36343:intron 35.0%
TGGAAGAAGAAGAGAGAAAT+GGG + chr2.2:2171885-2171904 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG - chr2.2:2174527-2174546 MS.gene36343:CDS 35.0%
TGGGTGAGAATAGAAAAAAG+AGG + chr2.2:2171859-2171878 None:intergenic 35.0%
TGTACTGTTCAAAATGGTGA+TGG - chr2.2:2172213-2172232 MS.gene36343:intron 35.0%
TGTAGATTGCCTTTGTATAG+TGG - chr2.2:2173033-2173052 MS.gene36343:intron 35.0%
TTAAAGCCTATGTCTTCAGT+TGG - chr2.2:2173063-2173082 MS.gene36343:intron 35.0%
TTAGTAAACGTCGCTTCATT+CGG + chr2.2:2172309-2172328 None:intergenic 35.0%
TTAGTAACCACCAACAAGAA+AGG + chr2.2:2174459-2174478 None:intergenic 35.0%
TTGCATGTTAATCGAGTAAC+TGG - chr2.2:2173380-2173399 MS.gene36343:intron 35.0%
TTGGAAGAAGAAGAGAGAAA+TGG + chr2.2:2171886-2171905 None:intergenic 35.0%
TTTCATTTGGGTCTTCAAAG+AGG - chr2.2:2172243-2172262 MS.gene36343:CDS 35.0%
TTTCCACCAAGAAAATGATG+TGG - chr2.2:2174814-2174833 MS.gene36343:CDS 35.0%
TTTGGTTGAAAGCTTGATTG+GGG + chr2.2:2172028-2172047 None:intergenic 35.0%
! AATTTTATTCCCCTATGGTG+TGG + chr2.2:2173972-2173991 None:intergenic 35.0%
! AGATTTTTGTCCAATCCTGT+GGG - chr2.2:2174906-2174925 MS.gene36343:CDS 35.0%
! CACCATTTTGAACAGTACAA+AGG + chr2.2:2172212-2172231 None:intergenic 35.0%
! GCAAAGTTTTCAGTCTCTTT+TGG + chr2.2:2172861-2172880 None:intergenic 35.0%
! GTTAGTGTTGAGGTTAAGAA+TGG - chr2.2:2172549-2172568 MS.gene36343:intron 35.0%
! TGATACCCGTGATTTTTGTT+AGG + chr2.2:2174267-2174286 None:intergenic 35.0%
! TTTTTGCAAAATTCCAACGG+GGG + chr2.2:2172076-2172095 None:intergenic 35.0%
!! AGATAAAGTGTTGTTGATGG+TGG + chr2.2:2171962-2171981 None:intergenic 35.0%
!! AGCTTTAAACAGGTAAGTGT+GGG - chr2.2:2173230-2173249 MS.gene36343:CDS 35.0%
!! ATGAGATATTGCATCGGTTA+AGG - chr2.2:2172583-2172602 MS.gene36343:intron 35.0%
!! ATTTTGGGAAATGTAACTGC+AGG - chr2.2:2174992-2175011 MS.gene36343:CDS 35.0%
!! GTCTCTTGTTATTTGGATTC+TGG + chr2.2:2173415-2173434 None:intergenic 35.0%
!! TATTGAGGATTGGTTTGAGT+CGG - chr2.2:2172644-2172663 MS.gene36343:intron 35.0%
!! TGAGATATTGCATCGGTTAA+GGG - chr2.2:2172584-2172603 MS.gene36343:intron 35.0%
!! TGCTGAATTCAGCTTTAAAC+AGG - chr2.2:2173220-2173239 MS.gene36343:CDS 35.0%
!! TTTTTAGCCTTTCTTGTTGG+TGG - chr2.2:2174449-2174468 MS.gene36343:CDS 35.0%
!!! AAGTTTTTTCCCAAGATGGA+AGG - chr2.2:2173793-2173812 MS.gene36343:CDS 35.0%
!!! CAGTAGATGATGCCTTTTTT+TGG - chr2.2:2174662-2174681 MS.gene36343:CDS 35.0%
!!! GGATTTTAAAACCACACCAT+AGG - chr2.2:2173958-2173977 MS.gene36343:intron 35.0%
!!! GGTTGATTGAGTGTTGTTTT+GGG + chr2.2:2171998-2172017 None:intergenic 35.0%
!!! TGGTTGATTGAGTGTTGTTT+TGG + chr2.2:2171999-2172018 None:intergenic 35.0%
!!! TTTAGTGCAGCTGAGTTTTT+TGG + chr2.2:2173665-2173684 None:intergenic 35.0%
AAAAACTTGAGCCCAGTAGT+TGG + chr2.2:2173781-2173800 None:intergenic 40.0%
AAAACTGAGGACAATAGGCA+TGG + chr2.2:2174006-2174025 None:intergenic 40.0%
AAAGCTAAGCCAGCAGAAAT+GGG + chr2.2:2174846-2174865 None:intergenic 40.0%
AACAACTCAAAAGCCATCTC+AGG + chr2.2:2172363-2172382 None:intergenic 40.0%
AATAAGACAAGGGATTGTGC+AGG - chr2.2:2172710-2172729 MS.gene36343:intron 40.0%
ACAAGCCAATTTAGACAACG+AGG + chr2.2:2172886-2172905 None:intergenic 40.0%
ACCAATCGTCATTTGAACCA+TGG + chr2.2:2173481-2173500 None:intergenic 40.0%
ACTTAATGGTTCTTTCCGCT+TGG - chr2.2:2173288-2173307 MS.gene36343:intron 40.0%
AGAAAAAAGAGGGGTGAGTT+TGG + chr2.2:2171848-2171867 None:intergenic 40.0%
ATAACTAGTGAGTAACGAGG+AGG + chr2.2:2174737-2174756 None:intergenic 40.0%
ATAAGACAAGGGATTGTGCA+GGG - chr2.2:2172711-2172730 MS.gene36343:intron 40.0%
ATTATTATATGCAGGGGCTG+GGG + chr2.2:2174581-2174600 None:intergenic 40.0%
CAATCGTCATTTGAACCATG+GGG + chr2.2:2173479-2173498 None:intergenic 40.0%
CACCTTATAAGGGGAATAAG+TGG - chr2.2:2174538-2174557 MS.gene36343:CDS 40.0%
CAGAAGTGGCTTGAAAAGAA+TGG - chr2.2:2173149-2173168 MS.gene36343:CDS 40.0%
CATCAACAACAGCATCAAAC+GGG + chr2.2:2173175-2173194 None:intergenic 40.0%
CATGTTAATCGAGTAACTGG+TGG - chr2.2:2173383-2173402 MS.gene36343:intron 40.0%
CATTATTATATGCAGGGGCT+GGG + chr2.2:2174582-2174601 None:intergenic 40.0%
CCAATCGTCATTTGAACCAT+GGG + chr2.2:2173480-2173499 None:intergenic 40.0%
CCATCAACAACAGCATCAAA+CGG + chr2.2:2173176-2173195 None:intergenic 40.0%
CCTTATAAGGGGAATAAGTG+GGG - chr2.2:2174540-2174559 MS.gene36343:CDS 40.0%
CGAACCTGCAAACCAAAAAA+AGG + chr2.2:2174677-2174696 None:intergenic 40.0%
CGGAATATGCGATGAAGATT+GGG - chr2.2:2172664-2172683 MS.gene36343:intron 40.0%
CGTTGAAGGTTATTGAGGAT+TGG - chr2.2:2172634-2172653 MS.gene36343:intron 40.0%
CTCCCTTTGTCCCTTATTAT+AGG - chr2.2:2174237-2174256 MS.gene36343:CDS 40.0%
GCACAAAAACCATACAAAGC+CGG + chr2.2:2172435-2172454 None:intergenic 40.0%
GCTTTGGTTGAAAGCTTGAT+TGG + chr2.2:2172030-2172049 None:intergenic 40.0%
GGATGCTATGAAAGCTTATG+AGG - chr2.2:2172461-2172480 MS.gene36343:intron 40.0%
GGCTAAAAATTCTCGAGAAC+TGG + chr2.2:2174438-2174457 None:intergenic 40.0%
TAAGGTGAATTCTAGCCACT+AGG + chr2.2:2174525-2174544 None:intergenic 40.0%
TCGGAATATGCGATGAAGAT+TGG - chr2.2:2172663-2172682 MS.gene36343:intron 40.0%
TGACACATAGCCATTTCCTT+GGG + chr2.2:2175073-2175092 None:intergenic 40.0%
TTGAAGCAGATGAAGAGAGT+AGG - chr2.2:2172381-2172400 MS.gene36343:intron 40.0%
TTGGTTGAAAGCTTGATTGG+GGG + chr2.2:2172027-2172046 None:intergenic 40.0%
! AAAGTTGAGGTCTTATGGTC+CGG - chr2.2:2172413-2172432 MS.gene36343:intron 40.0%
! CAACCACATCATTTTCTTGG+TGG + chr2.2:2174820-2174839 None:intergenic 40.0%
! GAGATTTTTGTCCAATCCTG+TGG - chr2.2:2174905-2174924 MS.gene36343:CDS 40.0%
! GATTTTTGTCCAATCCTGTG+GGG - chr2.2:2174907-2174926 MS.gene36343:CDS 40.0%
! TGTATGGTTTTTGTGCACGA+GGG - chr2.2:2172439-2172458 MS.gene36343:intron 40.0%
! TTGTATGGTTTTTGTGCACG+AGG - chr2.2:2172438-2172457 MS.gene36343:intron 40.0%
!! ACTTTTGGAGGTTAGTGTTG+AGG - chr2.2:2172539-2172558 MS.gene36343:intron 40.0%
!! CAGCTTTAAACAGGTAAGTG+TGG - chr2.2:2173229-2173248 MS.gene36343:CDS 40.0%
!! GTTGTTGATGGTGCAAATGT+AGG - chr2.2:2173185-2173204 MS.gene36343:CDS 40.0%
!! TAAAGTGTTGTTGATGGTGG+TGG + chr2.2:2171959-2171978 None:intergenic 40.0%
!! TTGTTATTTGGATTCTGGGC+AGG + chr2.2:2173410-2173429 None:intergenic 40.0%
!!! AGTTTTAAACCCCACAGGAT+TGG + chr2.2:2174919-2174938 None:intergenic 40.0%
!!! ATCTCAGTTTTAAACCCCAC+AGG + chr2.2:2174924-2174943 None:intergenic 40.0%
!!! GATGCCTTTTTTTGGTTTGC+AGG - chr2.2:2174670-2174689 MS.gene36343:CDS 40.0%
!!! GCTCAAGTTTTTTCCCAAGA+TGG - chr2.2:2173789-2173808 MS.gene36343:CDS 40.0%
!!! TGAGTGTTGTTTTGGGAAGT+GGG + chr2.2:2171991-2172010 None:intergenic 40.0%
!!! TTGAGTGTTGTTTTGGGAAG+TGG + chr2.2:2171992-2172011 None:intergenic 40.0%
AAATTCCAACGGGGGATTCT+TGG + chr2.2:2172068-2172087 None:intergenic 45.0%
AAGAAGAGAGAAATGGGCGA+TGG + chr2.2:2171879-2171898 None:intergenic 45.0%
AATTCCAACGGGGGATTCTT+GGG + chr2.2:2172067-2172086 None:intergenic 45.0%
ACTCAATGCATTGAGCACAC+TGG + chr2.2:2174884-2174903 None:intergenic 45.0%
AGAAGAGAGAAATGGGCGAT+GGG + chr2.2:2171878-2171897 None:intergenic 45.0%
AGCAAACATGGTTGTGCAGA+AGG + chr2.2:2174041-2174060 None:intergenic 45.0%
AGGAATCAGCCAATGGAAGT+TGG - chr2.2:2175012-2175031 MS.gene36343:CDS 45.0%
AGTAACGAGGAGGTAGAACT+AGG + chr2.2:2174727-2174746 None:intergenic 45.0%
ATCCTGACATCCCAAGGAAA+TGG - chr2.2:2175060-2175079 MS.gene36343:CDS 45.0%
ATGCGATGAAGATTGGGAAG+AGG - chr2.2:2172670-2172689 MS.gene36343:intron 45.0%
CAAAGCTAAGCCAGCAGAAA+TGG + chr2.2:2174847-2174866 None:intergenic 45.0%
CAGTGCTTGAAGAACATCAC+TGG + chr2.2:2172121-2172140 None:intergenic 45.0%
CCCATGGTTCAAATGACGAT+TGG - chr2.2:2173477-2173496 MS.gene36343:CDS 45.0%
CCCCACTTATTCCCCTTATA+AGG + chr2.2:2174543-2174562 None:intergenic 45.0%
CCGTTTGATGCTGTTGTTGA+TGG - chr2.2:2173173-2173192 MS.gene36343:CDS 45.0%
CGACGTTTACTAATGCTGCT+AGG - chr2.2:2172316-2172335 MS.gene36343:intron 45.0%
GACAGTGGAGCTAATGGTTA+GGG + chr2.2:2174170-2174189 None:intergenic 45.0%
GACCACTTGTTCCAACTACT+GGG - chr2.2:2173767-2173786 MS.gene36343:CDS 45.0%
GCATTATTATATGCAGGGGC+TGG + chr2.2:2174583-2174602 None:intergenic 45.0%
GGACCATAAGACCTCAACTT+TGG + chr2.2:2172414-2172433 None:intergenic 45.0%
GGCAATCTACAAGTAAAGGG+AGG + chr2.2:2173024-2173043 None:intergenic 45.0%
GGTGAGTTTGGCCATTGAAA+CGG + chr2.2:2171836-2171855 None:intergenic 45.0%
GTAACGAGGAGGTAGAACTA+GGG + chr2.2:2174726-2174745 None:intergenic 45.0%
GTCCTATAATTAGGGACGGA+GGG - chr2.2:2174395-2174414 MS.gene36343:CDS 45.0%
GTCGACGTTGAAGGTTATTG+AGG - chr2.2:2172629-2172648 MS.gene36343:intron 45.0%
GTGACACATAGCCATTTCCT+TGG + chr2.2:2175074-2175093 None:intergenic 45.0%
GTTCTTTATGCTACTCCCCA+TGG - chr2.2:2173461-2173480 MS.gene36343:intron 45.0%
TAACTGCAGGAATCAGCCAA+TGG - chr2.2:2175005-2175024 MS.gene36343:CDS 45.0%
TAGGAATTGCGCCAAAGTTG+AGG - chr2.2:2172400-2172419 MS.gene36343:intron 45.0%
TAGTGAACGGAACAGTGGTA+CGG + chr2.2:2171936-2171955 None:intergenic 45.0%
TCTAGCCATGACTAGAAGCA+AGG - chr2.2:2173937-2173956 MS.gene36343:intron 45.0%
TGACAGTGGAGCTAATGGTT+AGG + chr2.2:2174171-2174190 None:intergenic 45.0%
TGCGATGAAGATTGGGAAGA+GGG - chr2.2:2172671-2172690 MS.gene36343:intron 45.0%
TGCTGCCTCGTTGTCTAAAT+TGG - chr2.2:2172878-2172897 MS.gene36343:intron 45.0%
TGGTTGAAAGCTTGATTGGG+GGG + chr2.2:2172026-2172045 None:intergenic 45.0%
! GATTGAGTCAGGTGTTATGG+CGG - chr2.2:2172497-2172516 MS.gene36343:intron 45.0%
! GGTGCTTTTCCTTCCATCTT+GGG + chr2.2:2173805-2173824 None:intergenic 45.0%
! GTATGGTTTTTGTGCACGAG+GGG - chr2.2:2172440-2172459 MS.gene36343:intron 45.0%
! TCTTATGGTCCGGCTTTGTA+TGG - chr2.2:2172423-2172442 MS.gene36343:intron 45.0%
! TGATGGTGCAAATGTAGGAC+TGG - chr2.2:2173190-2173209 MS.gene36343:CDS 45.0%
! TGGTGCTTTTCCTTCCATCT+TGG + chr2.2:2173806-2173825 None:intergenic 45.0%
! TGGTTGATACCCATTTCTGC+TGG - chr2.2:2174834-2174853 MS.gene36343:CDS 45.0%
! TTCTTGGGCAGCTTTTCTTC+TGG + chr2.2:2172052-2172071 None:intergenic 45.0%
!! AAGATGGAAGGAAAAGCACC+AGG - chr2.2:2173805-2173824 MS.gene36343:intron 45.0%
!! GGATGAGCTTTGTGCACTTT+TGG - chr2.2:2172524-2172543 MS.gene36343:intron 45.0%
!! TGAGCTTTGTGCACTTTTGG+AGG - chr2.2:2172527-2172546 MS.gene36343:intron 45.0%
!! TTGATGGTGGTGGTAGTGAA+CGG + chr2.2:2171949-2171968 None:intergenic 45.0%
!! TTTTTGGTCAGGTAGCCTAG+TGG - chr2.2:2174507-2174526 MS.gene36343:CDS 45.0%
AAGCTTGATTGGGGGGTTAG+TGG + chr2.2:2172019-2172038 None:intergenic 50.0%
AGCCATTTCCTTGGGATGTC+AGG + chr2.2:2175065-2175084 None:intergenic 50.0%
AGCCCAGTAGTTGGAACAAG+TGG + chr2.2:2173772-2173791 None:intergenic 50.0%
CGAGTATCAGTCTCAACTCG+TGG - chr2.2:2174695-2174714 MS.gene36343:CDS 50.0%
CTCCCTCCGTCCCTAATTAT+AGG + chr2.2:2174400-2174419 None:intergenic 50.0%
GAAGATTGGGAAGAGGGAGT+GGG - chr2.2:2172677-2172696 MS.gene36343:intron 50.0%
GCGCCAAAGTTGAGGTCTTA+TGG - chr2.2:2172408-2172427 MS.gene36343:intron 50.0%
GGACCACTTGTTCCAACTAC+TGG - chr2.2:2173766-2173785 MS.gene36343:CDS 50.0%
GGATCATCGCTAGCTACAGT+TGG + chr2.2:2175044-2175063 None:intergenic 50.0%
GGTCCTATAATTAGGGACGG+AGG - chr2.2:2174394-2174413 MS.gene36343:CDS 50.0%
GTTAAGGGCTGTGGTTAGAC+AGG - chr2.2:2172599-2172618 MS.gene36343:intron 50.0%
TGAAGATTGGGAAGAGGGAG+TGG - chr2.2:2172676-2172695 MS.gene36343:intron 50.0%
TGCTAAGGAGGATCCTGAGA+TGG - chr2.2:2172347-2172366 MS.gene36343:intron 50.0%
TGGCACATGCCAACTTCCAT+TGG + chr2.2:2175024-2175043 None:intergenic 50.0%
! TAGGTTAGCTGCTGCTAAGG+AGG - chr2.2:2172335-2172354 MS.gene36343:intron 50.0%
! TGCTAGGTTAGCTGCTGCTA+AGG - chr2.2:2172332-2172351 MS.gene36343:intron 50.0%
!! ATTGCATCGGTTAAGGGCTG+TGG - chr2.2:2172590-2172609 MS.gene36343:intron 50.0%
!!! GGCAGCTTTTCTTCTGGCTT+TGG + chr2.2:2172046-2172065 None:intergenic 50.0%
ACATCAACCTCCGCGTGTGT+TGG - chr2.2:2175128-2175147 MS.gene36343:CDS 55.0%
AGACAAGGGATTGTGCAGGG+AGG - chr2.2:2172714-2172733 MS.gene36343:intron 55.0%
GAAGAGGGAGTGGGATGATG+AGG - chr2.2:2172686-2172705 MS.gene36343:intron 55.0%
GCGATGATCCTGACATCCCA+AGG - chr2.2:2175054-2175073 MS.gene36343:CDS 55.0%
GCTGCGTGGAACCGTTTCAA+TGG - chr2.2:2171822-2171841 MS.gene36343:CDS 55.0%
GCTTGGAAGTGGGCAATGGA+AGG - chr2.2:2172761-2172780 MS.gene36343:intron 55.0%
GGTGTCTGAGTCGACGTTGA+AGG - chr2.2:2172620-2172639 MS.gene36343:intron 55.0%
! AGGGGAATAAGTGGGGTGTC+TGG - chr2.2:2174547-2174566 MS.gene36343:CDS 55.0%
! CTTTTCGCGCTTCGTCGTAG+AGG + chr2.2:2172146-2172165 None:intergenic 55.0%
! GGGAATAAGTGGGGTGTCTG+GGG - chr2.2:2174549-2174568 MS.gene36343:CDS 55.0%
! GGGGAATAAGTGGGGTGTCT+GGG - chr2.2:2174548-2174567 MS.gene36343:CDS 55.0%
! GGTGGTAGTGAACGGAACAG+TGG + chr2.2:2171941-2171960 None:intergenic 55.0%
! TGAGTCAGGTGTTATGGCGG+AGG - chr2.2:2172500-2172519 MS.gene36343:intron 55.0%
CAAGGGATTGTGCAGGGAGG+TGG - chr2.2:2172717-2172736 MS.gene36343:intron 60.0%
TCAAGTGCCAACACACGCGG+AGG + chr2.2:2175138-2175157 None:intergenic 60.0%
! GGCAAGGGTGGCTTGGAAGT+GGG - chr2.2:2172751-2172770 MS.gene36343:intron 60.0%
! GGTGGCTTGGAAGTGGGCAA+TGG - chr2.2:2172757-2172776 MS.gene36343:intron 60.0%
! GTCAGGTGTTATGGCGGAGG+AGG - chr2.2:2172503-2172522 MS.gene36343:intron 60.0%
!! AGGGAGGTGGTGGATGGCAT+GGG - chr2.2:2172730-2172749 MS.gene36343:intron 60.0%
!! GTGGTGGATGGCATGGGCAA+GGG - chr2.2:2172736-2172755 MS.gene36343:intron 60.0%
!! TTGTGCAGGGAGGTGGTGGA+TGG - chr2.2:2172724-2172743 MS.gene36343:intron 60.0%
GCTGCCCAAGAATCCCCCGT+TGG - chr2.2:2172060-2172079 MS.gene36343:intron 65.0%
GGGATTGTGCAGGGAGGTGG+TGG - chr2.2:2172720-2172739 MS.gene36343:intron 65.0%
GTGGATGGCATGGGCAAGGG+TGG - chr2.2:2172739-2172758 MS.gene36343:intron 65.0%
TGGCATGGGCAAGGGTGGCT+TGG - chr2.2:2172744-2172763 MS.gene36343:intron 65.0%
! GGGCAAGGGTGGCTTGGAAG+TGG - chr2.2:2172750-2172769 MS.gene36343:intron 65.0%
!! CAGGGAGGTGGTGGATGGCA+TGG - chr2.2:2172729-2172748 MS.gene36343:intron 65.0%
!! GGTGGTGGATGGCATGGGCA+AGG - chr2.2:2172735-2172754 MS.gene36343:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 2171817 2175157 2171817 ID=MS.gene36343
chr2.2 mRNA 2171817 2175157 2171817 ID=MS.gene36343.t1;Parent=MS.gene36343
chr2.2 exon 2174033 2175157 2174033 ID=MS.gene36343.t1.exon1;Parent=MS.gene36343.t1
chr2.2 CDS 2174033 2175157 2174033 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
chr2.2 exon 2173733 2173822 2173733 ID=MS.gene36343.t1.exon2;Parent=MS.gene36343.t1
chr2.2 CDS 2173733 2173822 2173733 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
chr2.2 exon 2173476 2173657 2173476 ID=MS.gene36343.t1.exon3;Parent=MS.gene36343.t1
chr2.2 CDS 2173476 2173657 2173476 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
chr2.2 exon 2173148 2173268 2173148 ID=MS.gene36343.t1.exon4;Parent=MS.gene36343.t1
chr2.2 CDS 2173148 2173268 2173148 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
chr2.2 exon 2172214 2172282 2172214 ID=MS.gene36343.t1.exon5;Parent=MS.gene36343.t1
chr2.2 CDS 2172214 2172282 2172214 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
chr2.2 exon 2171817 2171960 2171817 ID=MS.gene36343.t1.exon6;Parent=MS.gene36343.t1
chr2.2 CDS 2171817 2171960 2171817 ID=cds.MS.gene36343.t1;Parent=MS.gene36343.t1
Gene Sequence

>MS.gene36343

ATGCTGCTGCGTGGAACCGTTTCAATGGCCAAACTCACCCCTCTTTTTTCTATTCTCACCCATCGCCCATTTCTCTCTTCTTCTTCCAATTCTTTCTCTCTCAAACACACTTTCAACCGTACCACTGTTCCGTTCACTACCACCACCATCAACAACACTTTATCTCAAACACCCACTTCCCAAAACAACACTCAATCAACCACTAACCCCCCAATCAAGCTTTCAACCAAAGCCAGAAGAAAAGCTGCCCAAGAATCCCCCGTTGGAATTTTGCAAAAAAAACTCAACAACTGTTCTAAAACCAGTGATGTTCTTCAAGCACTGAACCTCTACGACGAAGCGCGAAAAGCACATGTTCCCCTCAATCTTGATCATTATAATAAACTCTTATACCTTTGTACTGTTCAAAATGGTGATGGAAGTTTTTTTCATTTGGGTCTTCAAAGAGGTTTTGAGATTTTTGAGCAGATGTTAAGGGACAATGTTGAGCCGAATGAAGCGACGTTTACTAATGCTGCTAGGTTAGCTGCTGCTAAGGAGGATCCTGAGATGGCTTTTGAGTTGTTGAAGCAGATGAAGAGAGTAGGAATTGCGCCAAAGTTGAGGTCTTATGGTCCGGCTTTGTATGGTTTTTGTGCACGAGGGGATGCTATGAAAGCTTATGAGGTTGATGATGATATGATTGAGTCAGGTGTTATGGCGGAGGAGGATGAGCTTTGTGCACTTTTGGAGGTTAGTGTTGAGGTTAAGAATGGAGATAAGGTGTATGAGATATTGCATCGGTTAAGGGCTGTGGTTAGACAGGTGTCTGAGTCGACGTTGAAGGTTATTGAGGATTGGTTTGAGTCGGAATATGCGATGAAGATTGGGAAGAGGGAGTGGGATGATGAGGTAATAAGACAAGGGATTGTGCAGGGAGGTGGTGGATGGCATGGGCAAGGGTGGCTTGGAAGTGGGCAATGGAAGGTTGTTAAGACAAATGTAGATGAGGATGGAATGTGTCTTTCATGCAGTGAGAAGCTTGTGAGCATTGATATTGATCCAAAAGAGACTGAAAACTTTGCTGCCTCGTTGTCTAAATTGGCTTGTGAAAAACAACCTAAAGCAAACTTCAATCATTTTCAGGTAGAACTGTCTTCACTGTTTTGTTCAAAAAATTACGTGTACTTGCTTAAAAGTTAAAAGCTGAATTTGGTGATGGATGCCTCCCTTTACTTGTAGATTGCCTTTGTATAGTGGTTATGCTTTAAAGCCTATGTCTTCAGTTGGTTATAGATAATCTAGAAGAATTAGTATAGGCATAGGAACTCATGTATATATGTTTAACTTTTGCAGAAGTGGCTTGAAAAGAATGGCCCGTTTGATGCTGTTGTTGATGGTGCAAATGTAGGACTGGCCAACATTGCTGAATTCAGCTTTAAACAGGTAAGTGTGGGATTGTTGACTTTATTAGCGCATCATGAAAGCAGCTACTTAATGGTTCTTTCCGCTTGGTTGTAGCTTGATTATGCTGTTCGACAATTGCGTCAACTGAGCCCTTCAAAGAGATTGCCACTTATAATTTTGCATGTTAATCGAGTAACTGGTGGTCCTGCCCAGAATCCAAATAACAAGAGACTTATAGAAAATTGGAAAAAAAATGGTGTTCTTTATGCTACTCCCCATGGTTCAAATGACGATTGGTAATGAAGTGCTTCCATGATATTTTAGTTAGATTGAGTTTCCTAATGTAATTTTTTCTTCTTATTTTACATTTTCAACTCTGGTTGAGTTGTATTATACATTTCCAACATTGATAGGAATATAGACTCTTCATTATATGTCATCTGTGTAATGTGCAGCACTCCAAAAAACTCAGCTGCACTAAAATGTTAATTTGTTTATTGCAGGTACTGGTTATATGCTGCAGTTAGTTGTAAATGCTTACTTTTGACAAATGATGAGATGAGGGACCACTTGTTCCAACTACTGGGCTCAAGTTTTTTCCCAAGATGGAAGGAAAAGCACCAGGTATTCTAAATTATCATAGAAATTCATTTTCATCATAACCATATCAAGATGCATTCATTATAAGGGAGAGGCTACAAATTCTGCATGTGTTCTGTATCTATGAACTGTTGTCTAGCCATGACTAGAAGCAAGGATTTTAAAACCACACCATAGGGGAATAAAATTATTACAGCTGGCCATGCCTATTGTCCTCAGTTTTTTGTTTAATATGCCTTCTGCACAACCATGTTTGCTTAACTTTAATCCTAGTAATCTAATATGGAATGAGGCTAGTCTAGAAAAGCTTATGATCCTACAATTAAGTTCCTTTAGAAATATAATTCATTCTTCTGATTCATTTCCCTAACCATTAGCTCCACTGTCAATTTTTCTTATCTATGAAGTTTGTAAGAAAAGGTTATGTATTTATACTCCCTTTGTCCCTTATTATAGGAACACCTAACAAAAATCACGGGTATCAAGAAAAATTGGTAGTGTTATACGGGATAGATTTGGAAAAAGAGTAATAAATGCATCGAGAAATTTATAGAATGTCTTATATTTAGGGACAGACAAGTTTTTGTAAATGGTCCTATAATTAGGGACGGAGGGAGTATTCAAATTTAGAACCAGTTCTCGAGAATTTTTAGCCTTTCTTGTTGGTGGTTACTAATTTGCTAGCTGTCTTCTTTTTTTTTTTTTTTTTGGTCAGGTAGCCTAGTGGCTAGAATTCACCTTATAAGGGGAATAAGTGGGGTGTCTGGGGTTCGAACCCCAGCCCCTGCATATAATAATGCATTGTCCTGCTAGTTGTCTTCTATTAATGATATTTAGATATTTAACTCCTATAATGAAACAGTAGATGATGCCTTTTTTTGGTTTGCAGGTTCGAGTATCAGTCTCAACTCGTGGAGCATCCCTAGTTCTACCTCCTCGTTACTCACTAGTTATTCAGGTCAGACGATAACCCAATTGATTTTCTTGTTCTCTCGGATATAGAAGAGCATGTTTCCACCAAGAAAATGATGTGGTTGATACCCATTTCTGCTGGCTTAGCTTTGAAAAAGAATTCTCACCAGTGTGCTCAATGCATTGAGTTGAGATTTTTGTCCAATCCTGTGGGGTTTAAAACTGAGATTGAAACTTAAATTATATATGCTAAATATATTCATGAAAGATGAATAATATTTTGGGAAATGTAACTGCAGGAATCAGCCAATGGAAGTTGGCATGTGCCAACTGTAGCTAGCGATGATCCTGACATCCCAAGGAAATGGCTATGTGTCACTAGATCTAGAAAAAACTCATTACATAATCTACGAACATCAACCTCCGCGTGTGTTGGCACTTGA
Protein sequence

>MS.gene36343.t1

MLLRGTVSMAKLTPLFSILTHRPFLSSSSNSFSLKHTFNRTTVPFTTTTINNTLSQTPTSQNNTQSTTNPPIKLSTKARRKAAQESPVGILQKKLNNCSKTSDVLQALNLYDEARKAHVPLNLDHYNKLLYLCTVQNGDGSFFHLGLQRGFEIFEQMLRDNVEPNEATFTNAARLAAAKEDPEMAFELLKQMKRVGIAPKLRSYGPALYGFCARGDAMKAYEVDDDMIESGVMAEEDELCALLEVSVEVKNGDKVYEILHRLRAVVRQVSESTLKVIEDWFESEYAMKIGKREWDDEVIRQGIVQGGGGWHGQGWLGSGQWKVVKTNVDEDGMCLSCSEKLVSIDIDPKETENFAASLSKLACEKQPKANFNHFQKWLEKNGPFDAVVDGANVGLANIAEFSFKQLDYAVRQLRQLSPSKRLPLIILHVNRVTGGPAQNPNNKRLIENWKKNGVLYATPHGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRVSVSTRGASLVLPPRYSLVIQESANGSWHVPTVASDDPDIPRKWLCVTRSRKNSLHNLRTSTSACVGT