AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36529

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36529.t1 MTR_7g100240 98.108 370 7 0 1 370 1 370 0.0 753
MS.gene36529.t1 MTR_1g067210 77.005 374 81 1 1 369 1 374 0.0 594
MS.gene36529.t1 MTR_1g116260 66.954 348 111 2 5 348 13 360 5.08e-174 489
MS.gene36529.t1 MTR_7g081020 64.754 366 125 2 4 365 6 371 1.30e-168 476
MS.gene36529.t1 MTR_1g112840 63.115 366 131 2 4 365 11 376 1.42e-166 471
MS.gene36529.t1 MTR_8g074930 62.931 348 128 1 17 363 25 372 1.84e-164 466
MS.gene36529.t1 MTR_2g033910 56.438 365 145 3 5 363 12 368 1.64e-149 427
MS.gene36529.t1 MTR_7g081020 65.101 298 101 1 4 298 6 303 7.13e-137 393
MS.gene36529.t1 MTR_0015s0140 54.268 328 141 3 22 349 38 356 3.53e-127 370
MS.gene36529.t1 MTR_1g106855 54.079 331 142 2 18 346 16 338 1.60e-123 361
MS.gene36529.t1 MTR_8g074930 64.615 260 91 1 105 363 1 260 3.87e-122 354
MS.gene36529.t1 MTR_0015s0140 55.823 249 109 1 101 349 55 302 8.39e-99 296
MS.gene36529.t1 MTR_3g032660 46.154 325 158 6 29 346 33 347 8.82e-96 292
MS.gene36529.t1 MTR_3g032700 46.769 325 156 7 29 346 33 347 1.60e-95 291
MS.gene36529.t1 MTR_1g106855 51.064 282 128 2 18 297 16 289 2.39e-94 284
MS.gene36529.t1 MTR_7g090530 46.462 325 157 6 29 346 34 348 7.59e-91 280
MS.gene36529.t1 MTR_7g090550 44.848 330 165 6 29 350 35 355 1.93e-88 273
MS.gene36529.t1 MTR_3g032590 45.149 268 127 5 85 346 100 353 8.98e-71 228
MS.gene36529.t1 MTR_4g113480 35.952 331 193 6 22 348 34 349 3.54e-61 206
MS.gene36529.t1 MTR_4g113345 33.618 351 189 13 3 348 1 312 9.74e-45 157
MS.gene36529.t1 MTR_7g060770 29.530 298 181 6 71 349 263 550 2.67e-39 147
MS.gene36529.t1 MTR_4g119830 29.483 329 173 7 71 345 164 487 1.35e-38 144
MS.gene36529.t1 MTR_4g076560 30.435 299 176 7 70 349 201 486 2.83e-37 140
MS.gene36529.t1 MTR_7g090540 41.117 197 93 5 159 350 7 185 2.52e-35 130
MS.gene36529.t1 MTR_4g063905 30.466 279 152 6 108 349 426 699 2.36e-34 134
MS.gene36529.t1 MTR_4g113210 32.090 268 148 9 21 279 15 257 1.69e-33 125
MS.gene36529.t1 MTR_1g085530 29.236 301 148 5 109 349 592 887 2.70e-33 131
MS.gene36529.t1 MTR_4g098650 29.450 309 159 6 102 356 475 778 1.79e-32 129
MS.gene36529.t1 MTR_3g464700 32.883 222 107 5 71 291 118 298 1.31e-31 122
MS.gene36529.t1 MTR_5g071550 34.529 223 104 6 70 291 153 334 1.42e-31 123
MS.gene36529.t1 MTR_3g464650 29.964 277 138 7 70 345 93 314 2.29e-30 118
MS.gene36529.t1 MTR_5g071550 33.184 223 105 7 70 289 153 334 8.98e-28 112
MS.gene36529.t1 MTR_1g115570 28.710 310 148 9 47 353 106 345 1.71e-26 108
MS.gene36529.t1 MTR_2g078760 30.576 278 128 10 71 345 38 253 3.11e-24 100
MS.gene36529.t1 MTR_1g014640 30.627 271 138 9 47 313 88 312 5.28e-24 101
MS.gene36529.t1 MTR_1g013400 30.627 271 138 9 47 313 88 312 5.28e-24 101
MS.gene36529.t1 MTR_4g094208 30.877 285 144 12 35 314 30 266 6.36e-24 100
MS.gene36529.t1 MTR_2g078760 30.576 278 128 10 71 345 117 332 7.12e-24 100
MS.gene36529.t1 MTR_3g091060 30.870 230 112 6 66 291 120 306 9.55e-24 101
MS.gene36529.t1 MTR_5g063940 31.034 319 144 13 31 343 31 279 1.00e-23 99.8
MS.gene36529.t1 MTR_5g063940 32.292 288 127 12 62 343 7 232 1.36e-23 98.2
MS.gene36529.t1 MTR_3g105730 29.000 300 144 11 47 343 45 278 2.15e-23 99.0
MS.gene36529.t1 MTR_3g105730 29.000 300 144 11 47 343 23 256 2.17e-23 98.6
MS.gene36529.t1 MTR_5g024340 29.371 286 129 9 71 346 124 346 2.45e-23 100
MS.gene36529.t1 MTR_2g008850 29.078 282 137 9 64 343 12 232 4.27e-22 94.0
MS.gene36529.t1 MTR_4g125810 29.297 256 122 7 54 291 231 445 1.19e-21 96.7
MS.gene36529.t1 MTR_2g008850 29.078 282 137 9 64 343 58 278 2.00e-21 93.2
MS.gene36529.t1 MTR_4g123080 30.847 295 142 14 62 347 87 328 4.31e-21 93.6
MS.gene36529.t1 MTR_4g123080 30.847 295 142 14 62 347 105 346 4.89e-21 93.6
MS.gene36529.t1 MTR_3g074610 28.797 316 155 13 31 343 31 279 1.57e-20 90.9
MS.gene36529.t1 MTR_8g463130 27.445 317 161 12 30 343 1 251 1.70e-20 90.1
MS.gene36529.t1 MTR_8g463130 27.187 320 164 12 30 346 29 282 1.73e-20 90.5
MS.gene36529.t1 MTR_2g033000 29.825 285 141 9 70 346 99 332 3.01e-20 91.3
MS.gene36529.t1 MTR_1g050520 29.537 281 140 10 72 347 419 646 5.42e-20 92.0
MS.gene36529.t1 MTR_3g107880 28.231 294 146 12 66 350 59 296 1.01e-19 89.4
MS.gene36529.t1 MTR_3g107880 28.421 285 143 11 66 345 116 344 2.65e-19 88.6
MS.gene36529.t1 MTR_3g107880 28.421 285 143 11 66 345 117 345 3.03e-19 88.6
MS.gene36529.t1 MTR_4g116420 28.777 278 142 9 70 343 123 348 4.12e-19 88.2
MS.gene36529.t1 MTR_3g104710 28.197 305 160 12 60 345 275 539 4.86e-19 89.0
MS.gene36529.t1 MTR_1g028300 27.726 321 176 11 35 349 113 383 1.66e-18 86.7
MS.gene36529.t1 MTR_7g025640 30.698 215 110 6 135 345 7 186 2.74e-18 82.8
MS.gene36529.t1 MTR_5g080680 27.586 232 129 5 68 292 129 328 3.55e-18 85.5
MS.gene36529.t1 MTR_3g068200 25.000 296 158 10 71 345 123 375 1.20e-17 84.0
MS.gene36529.t1 MTR_4g094542 28.346 254 111 11 71 308 150 348 2.02e-17 83.2
MS.gene36529.t1 MTR_1g015110 27.419 310 149 12 67 348 285 546 2.65e-17 83.6
MS.gene36529.t1 MTR_1g086350 26.573 286 149 11 70 346 101 334 1.48e-16 80.5
MS.gene36529.t1 MTR_1g086350 26.573 286 149 11 70 346 117 350 1.68e-16 80.5
MS.gene36529.t1 MTR_3g105880 25.614 285 138 10 52 292 33 287 1.88e-16 79.7
MS.gene36529.t1 MTR_7g093240 35.333 150 61 5 150 297 4 119 2.38e-16 75.1
MS.gene36529.t1 MTR_3g105880 25.614 285 138 10 52 292 33 287 2.77e-16 79.7
MS.gene36529.t1 MTR_1g014190 26.592 267 122 10 70 292 51 287 1.16e-15 77.8
MS.gene36529.t1 MTR_2g435550 29.123 285 146 12 71 326 78 335 1.63e-15 77.4
MS.gene36529.t1 MTR_2g435550 28.873 284 148 11 71 326 92 349 1.75e-15 77.4
MS.gene36529.t1 MTR_1g086350 26.241 282 147 11 74 346 19 248 1.90e-15 76.3
MS.gene36529.t1 MTR_1g014190 25.843 267 124 9 70 292 89 325 3.13e-15 76.6
MS.gene36529.t1 MTR_7g021530 32.075 159 90 5 152 309 245 386 1.08e-14 75.5
MS.gene36529.t1 MTR_7g021530 32.075 159 90 5 152 309 204 345 1.18e-14 75.1
MS.gene36529.t1 MTR_7g021530 32.075 159 90 5 152 309 154 295 1.42e-14 74.7
MS.gene36529.t1 MTR_2g435550 28.996 269 136 11 71 311 92 333 1.89e-14 74.3
MS.gene36529.t1 MTR_8g017240 28.295 258 143 9 71 310 86 319 2.03e-14 74.3
MS.gene36529.t1 MTR_5g071550 34.646 127 66 4 71 196 154 264 4.76e-14 72.4
MS.gene36529.t1 MTR_4g013295 26.154 325 160 14 63 351 69 349 1.55e-13 71.6
MS.gene36529.t1 MTR_5g009370 24.399 291 165 7 71 349 87 334 1.16e-12 68.6
MS.gene36529.t1 MTR_3g491830 26.482 253 138 10 70 297 88 317 1.29e-12 68.9
MS.gene36529.t1 MTR_1g016620 27.170 265 136 10 56 292 53 288 3.97e-12 67.0
MS.gene36529.t1 MTR_1g083690 27.465 284 152 13 71 326 89 346 8.85e-12 66.2
MS.gene36529.t1 MTR_4g120410 30.000 200 104 8 138 326 174 348 9.81e-12 65.9
MS.gene36529.t1 MTR_4g094208 30.058 173 95 8 35 204 30 179 7.08e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36529.t1 AT3G12620 66.304 368 121 1 1 365 10 377 0.0 511
MS.gene36529.t1 AT3G12620 66.304 368 121 1 1 365 10 377 0.0 511
MS.gene36529.t1 AT3G55050 64.481 366 121 2 5 365 13 374 6.98e-177 497
MS.gene36529.t1 AT3G55050 64.481 366 121 2 5 365 13 374 6.98e-177 497
MS.gene36529.t1 AT3G51370 65.994 347 116 1 19 365 27 371 5.87e-174 489
MS.gene36529.t1 AT3G51370 65.994 347 116 1 19 365 27 371 5.87e-174 489
MS.gene36529.t1 AT5G66080 64.857 350 121 2 18 365 28 377 1.43e-168 476
MS.gene36529.t1 AT4G38520 62.178 349 131 1 16 363 26 374 1.42e-165 469
MS.gene36529.t1 AT4G38520 62.178 349 131 1 16 363 26 374 1.42e-165 469
MS.gene36529.t1 AT5G02760 62.264 371 136 3 1 370 1 368 8.62e-162 458
MS.gene36529.t1 AT3G17090 57.270 337 132 4 24 358 45 371 1.18e-135 392
MS.gene36529.t1 AT3G51370 64.130 276 97 1 90 365 13 286 2.22e-131 378
MS.gene36529.t1 AT5G66080 65.428 269 92 1 98 365 5 273 1.14e-127 368
MS.gene36529.t1 AT4G33920 51.862 349 149 3 22 359 20 360 1.46e-124 364
MS.gene36529.t1 AT5G06750 49.856 347 163 2 24 367 43 381 1.17e-119 352
MS.gene36529.t1 AT5G06750 49.856 347 163 2 24 367 43 381 1.17e-119 352
MS.gene36529.t1 AT3G17090 55.797 276 110 4 24 297 45 310 1.45e-106 316
MS.gene36529.t1 AT4G33920 53.480 273 116 2 98 359 5 277 1.59e-98 295
MS.gene36529.t1 AT5G06750 51.852 270 127 1 101 367 30 299 7.50e-94 283
MS.gene36529.t1 AT4G33920 54.656 247 101 2 124 359 1 247 3.53e-91 275
MS.gene36529.t1 AT3G16560 31.310 313 170 7 71 345 175 480 1.95e-42 154
MS.gene36529.t1 AT3G16560 31.310 313 170 7 71 345 175 480 1.95e-42 154
MS.gene36529.t1 AT3G16560 31.310 313 170 7 71 345 175 480 1.95e-42 154
MS.gene36529.t1 AT1G07160 34.520 281 129 7 67 345 149 376 7.03e-38 140
MS.gene36529.t1 AT5G02400 31.884 276 149 5 108 349 399 669 3.84e-37 142
MS.gene36529.t1 AT2G46920 28.713 303 150 5 108 349 542 839 2.30e-35 137
MS.gene36529.t1 AT2G46920 28.713 303 150 5 108 349 542 839 2.30e-35 137
MS.gene36529.t1 AT2G46920 28.713 303 150 5 108 349 542 839 2.30e-35 137
MS.gene36529.t1 AT2G46920 28.713 303 150 5 108 349 542 839 2.30e-35 137
MS.gene36529.t1 AT3G09400 30.037 273 151 6 108 349 382 645 8.47e-35 135
MS.gene36529.t1 AT1G07630 29.032 279 156 5 108 349 384 657 1.34e-34 135
MS.gene36529.t1 AT2G28890 29.391 279 155 5 108 349 376 649 1.84e-34 134
MS.gene36529.t1 AT2G40180 31.683 303 136 10 58 345 139 385 6.94e-34 129
MS.gene36529.t1 AT3G16560 30.742 283 151 7 71 315 175 450 2.28e-33 129
MS.gene36529.t1 AT2G35350 28.383 303 161 6 102 358 486 778 3.97e-33 131
MS.gene36529.t1 AT2G30020 32.975 279 129 9 70 345 169 392 3.94e-30 119
MS.gene36529.t1 AT1G67820 34.222 225 105 5 70 292 114 297 1.17e-28 115
MS.gene36529.t1 AT1G67820 34.222 225 105 5 70 292 150 333 1.60e-28 115
MS.gene36529.t1 AT2G33700 32.877 292 117 12 69 347 121 346 1.51e-25 106
MS.gene36529.t1 AT3G09400 28.870 239 130 6 108 315 382 611 1.54e-25 108
MS.gene36529.t1 AT4G31750 30.147 272 139 9 47 313 44 269 8.26e-25 103
MS.gene36529.t1 AT4G31750 30.147 272 139 9 47 313 44 269 1.00e-24 103
MS.gene36529.t1 AT4G31750 30.147 272 139 9 47 313 44 269 1.00e-24 103
MS.gene36529.t1 AT3G51470 28.763 299 137 11 62 348 52 286 3.00e-24 102
MS.gene36529.t1 AT3G51470 28.763 299 137 11 62 348 96 330 6.00e-24 101
MS.gene36529.t1 AT1G43900 32.526 289 121 11 62 343 145 366 1.10e-23 101
MS.gene36529.t1 AT5G10740 30.556 288 146 11 31 313 30 268 1.40e-23 100
MS.gene36529.t1 AT5G10740 30.556 288 146 11 31 313 30 268 1.40e-23 100
MS.gene36529.t1 AT1G78200 29.393 313 152 12 35 343 33 280 7.15e-23 97.4
MS.gene36529.t1 AT1G78200 29.393 313 152 12 35 343 33 280 7.15e-23 97.4
MS.gene36529.t1 AT1G78200 29.393 313 152 12 35 343 33 280 7.15e-23 97.4
MS.gene36529.t1 AT5G53140 26.756 299 146 9 71 359 132 367 4.01e-22 97.4
MS.gene36529.t1 AT5G53140 26.756 299 146 9 71 359 132 367 4.01e-22 97.4
MS.gene36529.t1 AT1G78200 29.021 286 139 10 62 343 10 235 5.58e-22 94.0
MS.gene36529.t1 AT1G78200 29.021 286 139 10 62 343 10 235 5.58e-22 94.0
MS.gene36529.t1 AT2G25620 28.165 316 165 13 43 348 96 359 7.30e-22 96.3
MS.gene36529.t1 AT2G25620 28.165 316 165 13 43 348 96 359 7.30e-22 96.3
MS.gene36529.t1 AT4G28400 30.315 254 129 9 66 314 40 250 1.82e-21 92.8
MS.gene36529.t1 AT5G24940 29.825 285 146 11 31 310 30 265 2.94e-21 95.1
MS.gene36529.t1 AT4G28400 29.371 286 133 10 66 346 62 283 3.31e-21 92.8
MS.gene36529.t1 AT2G20630 29.242 277 129 10 71 343 63 276 8.59e-21 91.7
MS.gene36529.t1 AT2G20630 28.986 276 129 10 71 342 63 275 4.75e-20 89.7
MS.gene36529.t1 AT1G07430 28.696 230 124 5 71 292 157 354 7.27e-20 90.9
MS.gene36529.t1 AT1G34750 28.526 312 152 12 38 345 37 281 2.20e-19 87.4
MS.gene36529.t1 AT1G34750 28.526 312 152 12 38 345 37 281 2.20e-19 87.4
MS.gene36529.t1 AT1G34750 28.526 312 152 12 38 345 37 281 2.20e-19 87.4
MS.gene36529.t1 AT2G29380 28.571 301 162 10 57 345 101 360 2.57e-19 88.6
MS.gene36529.t1 AT1G48040 30.088 339 156 14 39 359 81 356 2.61e-19 89.0
MS.gene36529.t1 AT3G17250 28.571 273 140 10 62 314 142 379 3.79e-19 88.6
MS.gene36529.t1 AT1G22280 28.349 321 160 13 29 343 28 284 5.14e-19 86.7
MS.gene36529.t1 AT4G08260 27.698 278 112 10 70 345 18 208 6.58e-19 84.7
MS.gene36529.t1 AT4G26080 26.087 322 184 10 54 361 153 434 1.64e-18 87.0
MS.gene36529.t1 AT1G22280 28.481 316 160 12 29 343 28 278 1.90e-18 84.7
MS.gene36529.t1 AT3G62260 30.242 248 134 9 71 309 27 244 1.97e-18 85.1
MS.gene36529.t1 AT3G15260 29.603 277 128 11 71 343 73 286 2.91e-18 84.3
MS.gene36529.t1 AT3G15260 29.603 277 128 11 71 343 73 286 2.91e-18 84.3
MS.gene36529.t1 AT2G40860 28.470 281 144 8 71 347 423 650 3.22e-18 86.7
MS.gene36529.t1 AT2G40860 28.470 281 144 8 71 347 325 552 3.58e-18 86.3
MS.gene36529.t1 AT5G51760 27.083 240 124 8 71 291 114 321 4.76e-18 85.1
MS.gene36529.t1 AT5G51760 27.083 240 124 8 71 291 144 351 6.05e-18 85.1
MS.gene36529.t1 AT3G62260 30.242 248 134 9 71 309 116 333 7.12e-18 84.7
MS.gene36529.t1 AT3G62260 30.242 248 134 9 71 309 117 334 7.17e-18 84.7
MS.gene36529.t1 AT2G34740 28.938 273 148 10 44 314 96 324 1.09e-17 83.6
MS.gene36529.t1 AT2G25070 25.887 282 141 8 52 292 33 287 2.18e-17 82.8
MS.gene36529.t1 AT2G25070 25.887 282 141 8 52 292 33 287 2.18e-17 82.8
MS.gene36529.t1 AT3G16800 28.428 299 153 12 70 347 92 350 2.31e-17 82.8
MS.gene36529.t1 AT3G16800 28.428 299 153 12 70 347 92 350 2.31e-17 82.8
MS.gene36529.t1 AT3G16800 28.428 299 153 12 70 347 92 350 2.31e-17 82.8
MS.gene36529.t1 AT5G59220 28.384 229 123 6 71 292 148 342 6.35e-17 82.0
MS.gene36529.t1 AT3G16800 29.832 238 117 9 122 347 56 255 8.62e-17 79.7
MS.gene36529.t1 AT3G16800 29.832 238 117 9 122 347 56 255 8.62e-17 79.7
MS.gene36529.t1 AT2G40860 28.226 248 137 7 71 311 423 636 2.09e-16 81.3
MS.gene36529.t1 AT1G72770 27.308 260 121 5 60 291 227 446 2.43e-16 80.9
MS.gene36529.t1 AT1G72770 27.308 260 121 5 60 291 227 446 2.43e-16 80.9
MS.gene36529.t1 AT1G72770 27.308 260 121 5 60 291 227 446 2.43e-16 80.9
MS.gene36529.t1 AT2G34740 29.289 239 124 9 44 281 110 304 4.26e-16 79.0
MS.gene36529.t1 AT1G17550 26.603 312 151 12 71 348 237 504 4.35e-16 80.1
MS.gene36529.t1 AT1G17550 26.603 312 151 12 71 348 237 504 4.35e-16 80.1
MS.gene36529.t1 AT2G34740 29.289 239 124 9 44 281 92 286 4.36e-16 78.6
MS.gene36529.t1 AT1G18030 28.736 261 129 9 72 311 110 334 2.06e-15 77.0
MS.gene36529.t1 AT5G27930 28.000 300 152 14 71 344 92 353 4.80e-15 76.3
MS.gene36529.t1 AT5G27930 28.000 300 152 14 71 344 92 353 4.80e-15 76.3
MS.gene36529.t1 AT3G11410 24.314 255 134 7 71 308 137 349 5.37e-15 76.3
MS.gene36529.t1 AT1G34750 27.823 248 128 9 38 281 37 237 5.04e-14 71.6
MS.gene36529.t1 AT3G05640 27.957 279 152 13 71 326 93 345 5.10e-14 72.8
MS.gene36529.t1 AT3G05640 27.957 279 152 13 71 326 93 345 5.10e-14 72.8
MS.gene36529.t1 AT3G05640 27.957 279 152 13 71 326 93 345 5.10e-14 72.8
MS.gene36529.t1 AT5G26010 26.629 353 200 13 11 348 19 327 6.25e-14 72.4
MS.gene36529.t1 AT4G32950 26.014 296 167 12 64 348 65 319 1.42e-12 68.6

Find 83 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTATGAGTTCTGATTATT+TGG 0.094977 7.1:-7535690 MS.gene36529:CDS
TCTTTGCTTCTGATGGTTTA+TGG 0.141459 7.1:-7534078 MS.gene36529:CDS
TCACTCCTTGTTCAATCTTT+TGG 0.144007 7.1:+7533840 None:intergenic
GATTTGGGAAACCATCTTTA+TGG 0.196034 7.1:-7535779 MS.gene36529:CDS
GGTCCTCAAGGAACCTTTAT+AGG 0.223798 7.1:-7535668 MS.gene36529:CDS
CTTTGCTTCTGATGGTTTAT+GGG 0.228766 7.1:-7534077 MS.gene36529:CDS
TGAGAGCATACTCTTGAAAT+TGG 0.253266 7.1:+7535586 None:intergenic
ACTGAGAATTGGCTTGAAAA+AGG 0.264897 7.1:+7534153 None:intergenic
GAGCTATTATCAATCAGTTT+TGG 0.288253 7.1:+7533770 None:intergenic
ATTGTTATGGTACAAGGATT+TGG 0.289189 7.1:-7535795 MS.gene36529:CDS
TGAAGAAAGCAGAATTTAAC+AGG 0.297447 7.1:-7534210 MS.gene36529:CDS
TTGTTATGGTACAAGGATTT+GGG 0.311993 7.1:-7535794 MS.gene36529:CDS
AAGATGAGAAATTGATCTTC+AGG 0.326898 7.1:+7534097 None:intergenic
ACCATCATAAACACCTATAA+AGG 0.367844 7.1:+7535655 None:intergenic
AACCACAATCTGTGAATCAT+AGG 0.369310 7.1:+7534845 None:intergenic
CCTATGAGTTCTGATTATTT+GGG 0.385684 7.1:-7535689 MS.gene36529:CDS
GATGGCTCACTACTGAGAAT+TGG 0.390286 7.1:+7534142 None:intergenic
TTTCTCATCTTTGCTTCTGA+TGG 0.394754 7.1:-7534085 MS.gene36529:CDS
ATCCGCTGGTACATGTTGTT+TGG 0.395331 7.1:-7535033 MS.gene36529:CDS
TTGAAAATTCACCATAAAGA+TGG 0.408650 7.1:+7535768 None:intergenic
AATTCAAGCAAATAGTTCAT+TGG 0.412793 7.1:-7535738 MS.gene36529:CDS
GAAGAGTGAGGAAGGGAACA+AGG 0.421093 7.1:-7534947 MS.gene36529:CDS
TTTCAGAAAAGGTTATCAAA+AGG 0.431288 7.1:-7535127 MS.gene36529:CDS
TGATTGATAATAGCTCTCTA+TGG 0.431364 7.1:-7533763 MS.gene36529:CDS
GGAGACTCAAGGGCTGTGTT+AGG 0.432476 7.1:-7534969 MS.gene36529:CDS
GGAAAGTTGATGGATTGTTA+TGG 0.432672 7.1:-7535808 MS.gene36529:CDS
GATCGTAGCCAACTTGAATC+AGG 0.435753 7.1:-7535713 MS.gene36529:CDS
TAACGATATTCACAGCTACT+TGG 0.443990 7.1:+7534041 None:intergenic
GCTGGTACATGTTGTTTGGC+AGG 0.448527 7.1:-7535029 MS.gene36529:CDS
CTTCAGATATGCATCACCTA+TGG 0.450543 7.1:+7534228 None:intergenic
TGATGGATTGTTATGGTACA+AGG 0.456025 7.1:-7535801 MS.gene36529:CDS
TTCAGAAAAGGTTATCAAAA+GGG 0.466769 7.1:-7535126 MS.gene36529:CDS
AGATCAAGGGATTTCAGAAA+AGG 0.471446 7.1:-7535138 MS.gene36529:CDS
CACTCTGTTTGGCGTGTGAA+AGG 0.474473 7.1:-7534816 MS.gene36529:CDS
CCCAAATAATCAGAACTCAT+AGG 0.475948 7.1:+7535689 None:intergenic
TGTGTTAGGAAGAGTGAGGA+AGG 0.477652 7.1:-7534955 MS.gene36529:CDS
TGGTTATGAAACACTCTGTT+TGG 0.490832 7.1:-7534827 MS.gene36529:CDS
AAGAGTGAGGAAGGGAACAA+GGG 0.493346 7.1:-7534946 MS.gene36529:CDS
TGAGAAATTGATCTTCAGGT+TGG 0.496104 7.1:+7534101 None:intergenic
GATGTGAAAGGGAAAGTTGA+TGG 0.502197 7.1:-7535818 MS.gene36529:CDS
ACCTTTATAGGTGTTTATGA+TGG 0.502488 7.1:-7535656 MS.gene36529:CDS
TTGCAGGTTTCAAGATCCAT+AGG 0.507189 7.1:-7534244 MS.gene36529:intron
GGTGGTGATGGAGATGTGAA+AGG 0.507401 7.1:-7535830 MS.gene36529:CDS
CTGCCATCTCTGATTGAAAG+AGG 0.518398 7.1:+7533734 None:intergenic
GAAACGAAGCTTACATTGCG+TGG 0.519390 7.1:+7534010 None:intergenic
CTCTTTCAATCAGAGATGGC+AGG 0.520547 7.1:-7533733 MS.gene36529:CDS
CTGGTACATGTTGTTTGGCA+GGG 0.524737 7.1:-7535028 MS.gene36529:CDS
TCAACTGTGGAGGGTGGTGA+TGG 0.527360 7.1:-7535842 MS.gene36529:CDS
TCCCTATGATTCACAGATTG+TGG 0.527683 7.1:-7534847 MS.gene36529:CDS
ATAGGTGTTTATGATGGTCA+TGG 0.527745 7.1:-7535650 MS.gene36529:CDS
AAACTGAGAGAGATGATGTT+CGG 0.531123 7.1:-7534878 MS.gene36529:CDS
TCAAGCAAATAGTTCATTGG+AGG 0.537174 7.1:-7535735 MS.gene36529:CDS
TATCTATGACTATATCATGC+TGG 0.539611 7.1:-7535868 None:intergenic
TCTGATTATTTGGGTCCTCA+AGG 0.548992 7.1:-7535680 MS.gene36529:CDS
GCGTGTGAAAGGCATCATAC+AGG 0.551663 7.1:-7534805 MS.gene36529:intron
TGTCTCTTGTGAAGAAGCAA+TGG 0.558482 7.1:-7535076 MS.gene36529:CDS
AGTCTAAACTTCTGTGGCAG+AGG 0.558697 7.1:+7534184 None:intergenic
GTGGTGATGGAGATGTGAAA+GGG 0.558872 7.1:-7535829 MS.gene36529:CDS
TTGCAAATGCAGGAGACTCA+AGG 0.563487 7.1:-7534980 MS.gene36529:CDS
TCTCCTCTTTCAATCAGAGA+TGG 0.566031 7.1:-7533737 MS.gene36529:CDS
TCATAGGTCCTGATTCAAGT+TGG 0.579655 7.1:+7535705 None:intergenic
CAATTACTGTAATATCATCA+TGG 0.580958 7.1:+7533807 None:intergenic
ACCACAATCTGTGAATCATA+GGG 0.581742 7.1:+7534846 None:intergenic
TGCAAATGCAGGAGACTCAA+GGG 0.586962 7.1:-7534979 MS.gene36529:CDS
TGCTGGAAATCAACTGTGGA+GGG 0.596448 7.1:-7535851 MS.gene36529:CDS
TCAGGTAGTCTAAACTTCTG+TGG 0.603011 7.1:+7534178 None:intergenic
ATGCTGTATATTGCAAATGC+AGG 0.610667 7.1:-7534990 MS.gene36529:CDS
GACCTCCAAAAGATTGAACA+AGG 0.625989 7.1:-7533845 MS.gene36529:CDS
TTGGCAGGGATAATTTGCAA+TGG 0.628153 7.1:-7535014 MS.gene36529:CDS
AAAAGATTGAACAAGGAGTG+AGG 0.629700 7.1:-7533838 MS.gene36529:CDS
AAACCACAGATAGCATCCGC+TGG 0.655125 7.1:-7535047 MS.gene36529:CDS
GTACCAGCGGATGCTATCTG+TGG 0.663253 7.1:+7535044 None:intergenic
ATGCTGGAAATCAACTGTGG+AGG 0.664898 7.1:-7535852 MS.gene36529:CDS
ATCATGCTGGAAATCAACTG+TGG 0.668033 7.1:-7535855 MS.gene36529:CDS
TCATGTAACAGGGAATAGCA+AGG 0.668087 7.1:-7533925 MS.gene36529:intron
TGCCAAACAACATGTACCAG+CGG 0.678145 7.1:+7535031 None:intergenic
GTGTTAGGAAGAGTGAGGAA+GGG 0.687678 7.1:-7534954 MS.gene36529:CDS
ACACCTATAAAGGTTCCTTG+AGG 0.699526 7.1:+7535665 None:intergenic
GGTGTTTATGATGGTCATGG+TGG 0.701467 7.1:-7535647 MS.gene36529:CDS
TGGAAATCAACTGTGGAGGG+TGG 0.718714 7.1:-7535848 MS.gene36529:CDS
GGGCTGTGTTAGGAAGAGTG+AGG 0.729065 7.1:-7534959 MS.gene36529:CDS
GAAGAAAGCAGAATTTAACA+GGG 0.732756 7.1:-7534209 MS.gene36529:CDS
TGTAACAGGGAATAGCAAGG+AGG 0.777684 7.1:-7533922 MS.gene36529:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAAAATAAGATTTCT+AGG + chr7.1:7535256-7535275 None:intergenic 10.0%
!!! ATTTTTTTTAAGTTTCTATA+TGG - chr7.1:7535265-7535284 MS.gene36529:intron 10.0%
!!! TTTATTATTAAGTATGATTT+TGG - chr7.1:7534828-7534847 MS.gene36529:CDS 10.0%
!! AAATCAATATATAAGAATAC+CGG + chr7.1:7534392-7534411 None:intergenic 15.0%
!!! ATTTTATGAATTGATATTGA+TGG + chr7.1:7535460-7535479 None:intergenic 15.0%
!!! CTTTTATTACAAACATATAT+TGG - chr7.1:7534019-7534038 MS.gene36529:intron 15.0%
!! ACAAACATATATTGGAAATA+TGG - chr7.1:7534027-7534046 MS.gene36529:CDS 20.0%
!! ATTATTGGTATATAAAACAC+CGG - chr7.1:7534370-7534389 MS.gene36529:intron 20.0%
!! TATGATTGAAATTATAGAGT+AGG - chr7.1:7534893-7534912 MS.gene36529:CDS 20.0%
!! TTATATACCAATAATTACAG+CGG + chr7.1:7534365-7534384 None:intergenic 20.0%
!!! AGATTTCTAGGTAATATTAA+CGG + chr7.1:7535244-7535263 None:intergenic 20.0%
!!! ATTTTTTTTGTGTGTAAATC+AGG - chr7.1:7534408-7534427 MS.gene36529:intron 20.0%
!!! TTTCTGAAATAGTTGTAAAT+TGG - chr7.1:7534330-7534349 MS.gene36529:intron 20.0%
! AAGTTCTGTTAACACAAAAT+TGG + chr7.1:7535313-7535332 None:intergenic 25.0%
! AATTCAAGCAAATAGTTCAT+TGG - chr7.1:7533843-7533862 MS.gene36529:CDS 25.0%
! ACAAACTAATTGGTAAACTA+AGG - chr7.1:7534928-7534947 MS.gene36529:CDS 25.0%
! ATAGTTGGATATAAGTTACT+TGG + chr7.1:7534097-7534116 None:intergenic 25.0%
! CAAATCTTTCAGTATATGTT+CGG + chr7.1:7534235-7534254 None:intergenic 25.0%
! CAATTACTGTAATATCATCA+TGG + chr7.1:7535777-7535796 None:intergenic 25.0%
! CTATAATTTCAATCATACAG+TGG + chr7.1:7534890-7534909 None:intergenic 25.0%
! TTCAGAAAAGGTTATCAAAA+GGG - chr7.1:7534455-7534474 MS.gene36529:intron 25.0%
! TTCGTTTCTGTCAAAATTAA+AGG - chr7.1:7535586-7535605 MS.gene36529:intron 25.0%
! TTGAAAATTCACCATAAAGA+TGG + chr7.1:7533816-7533835 None:intergenic 25.0%
! TTTCAGAAAAGGTTATCAAA+AGG - chr7.1:7534454-7534473 MS.gene36529:intron 25.0%
!! CATATGTTTTTCTTATGCAA+CGG - chr7.1:7535025-7535044 MS.gene36529:CDS 25.0%
!! CGTAGTTTTTGTCAAAATTA+CGG + chr7.1:7534169-7534188 None:intergenic 25.0%
!! TCTTTATGGTGAATTTTCAA+TGG - chr7.1:7533816-7533835 MS.gene36529:CDS 25.0%
!!! ATAAGTTACTTGGTTTTTCT+AGG + chr7.1:7534087-7534106 None:intergenic 25.0%
AACCTTCAACCAAATGATTA+CGG - chr7.1:7535058-7535077 MS.gene36529:CDS 30.0%
AAGATGAGAAATTGATCTTC+AGG + chr7.1:7535487-7535506 None:intergenic 30.0%
ACAACTATGATTCATGTAAC+AGG - chr7.1:7535645-7535664 MS.gene36529:CDS 30.0%
ACCATCATAAACACCTATAA+AGG + chr7.1:7533929-7533948 None:intergenic 30.0%
ACCTTTATAGGTGTTTATGA+TGG - chr7.1:7533925-7533944 MS.gene36529:intron 30.0%
ACTCTTGTGATTATGGAAAA+AGG + chr7.1:7534144-7534163 None:intergenic 30.0%
AGTTTGATCTTATAACCTCA+AGG - chr7.1:7534291-7534310 MS.gene36529:intron 30.0%
ATTAGCTGCAACAAACTAAT+TGG - chr7.1:7534918-7534937 MS.gene36529:CDS 30.0%
ATTGTTATGGTACAAGGATT+TGG - chr7.1:7533786-7533805 MS.gene36529:CDS 30.0%
CAACTATGATTCATGTAACA+GGG - chr7.1:7535646-7535665 MS.gene36529:CDS 30.0%
CACAAAATTGGAGTAACATA+TGG + chr7.1:7535301-7535320 None:intergenic 30.0%
GAAGAAAGCAGAATTTAACA+GGG - chr7.1:7535372-7535391 MS.gene36529:intron 30.0%
GAATCGTAGTTAAATGTAGT+TGG - chr7.1:7535133-7535152 MS.gene36529:CDS 30.0%
GCATAAGAAAAACATATGCT+GGG + chr7.1:7535023-7535042 None:intergenic 30.0%
GGAGATCATAACAAGTAAAT+TGG + chr7.1:7534869-7534888 None:intergenic 30.0%
GTTTGATCTTATAACCTCAA+GGG - chr7.1:7534292-7534311 MS.gene36529:intron 30.0%
TGAAGAAAGCAGAATTTAAC+AGG - chr7.1:7535371-7535390 MS.gene36529:intron 30.0%
TGCATAAGAAAAACATATGC+TGG + chr7.1:7535024-7535043 None:intergenic 30.0%
TTGTTATGGTACAAGGATTT+GGG - chr7.1:7533787-7533806 MS.gene36529:CDS 30.0%
! ACCTATGAGTTCTGATTATT+TGG - chr7.1:7533891-7533910 MS.gene36529:CDS 30.0%
! CCTATGAGTTCTGATTATTT+GGG - chr7.1:7533892-7533911 MS.gene36529:CDS 30.0%
! GAGCTATTATCAATCAGTTT+TGG + chr7.1:7535814-7535833 None:intergenic 30.0%
! TGATTGATAATAGCTCTCTA+TGG - chr7.1:7535818-7535837 MS.gene36529:CDS 30.0%
!!! TTAACAGAACTTGTTTTTGC+AGG - chr7.1:7535321-7535340 MS.gene36529:intron 30.0%
AAAAGATTGAACAAGGAGTG+AGG - chr7.1:7535743-7535762 MS.gene36529:CDS 35.0%
AAACTGAGAGAGATGATGTT+CGG - chr7.1:7534703-7534722 MS.gene36529:intron 35.0%
AACCACAATCTGTGAATCAT+AGG + chr7.1:7534739-7534758 None:intergenic 35.0%
ACCACAATCTGTGAATCATA+GGG + chr7.1:7534738-7534757 None:intergenic 35.0%
ACCTTCAACCAAATGATTAC+GGG - chr7.1:7535059-7535078 MS.gene36529:CDS 35.0%
AGAAAAACATATGCTGGGAA+AGG + chr7.1:7535018-7535037 None:intergenic 35.0%
AGATCAAGGGATTTCAGAAA+AGG - chr7.1:7534443-7534462 MS.gene36529:intron 35.0%
ATAGGTGTTTATGATGGTCA+TGG - chr7.1:7533931-7533950 MS.gene36529:intron 35.0%
ATCAAACTATTGCCAACTCT+AGG + chr7.1:7534279-7534298 None:intergenic 35.0%
ATGCTGTATATTGCAAATGC+AGG - chr7.1:7534591-7534610 MS.gene36529:intron 35.0%
CATCATACAGGTACAAACTT+GGG - chr7.1:7534788-7534807 MS.gene36529:intron 35.0%
CCAAACATGCACTTAATAGT+TGG + chr7.1:7534112-7534131 None:intergenic 35.0%
CCAACTATTAAGTGCATGTT+TGG - chr7.1:7534109-7534128 MS.gene36529:CDS 35.0%
CCCAAATAATCAGAACTCAT+AGG + chr7.1:7533895-7533914 None:intergenic 35.0%
CTTTGCTTCTGATGGTTTAT+GGG - chr7.1:7535504-7535523 MS.gene36529:intron 35.0%
GATTTGGGAAACCATCTTTA+TGG - chr7.1:7533802-7533821 MS.gene36529:CDS 35.0%
GTTAGTACCGCTGTAATTAT+TGG - chr7.1:7534355-7534374 MS.gene36529:intron 35.0%
TAACGATATTCACAGCTACT+TGG + chr7.1:7535543-7535562 None:intergenic 35.0%
TCAAGCAAATAGTTCATTGG+AGG - chr7.1:7533846-7533865 MS.gene36529:CDS 35.0%
TCTTTGCTTCTGATGGTTTA+TGG - chr7.1:7535503-7535522 MS.gene36529:intron 35.0%
TGAGAAATTGATCTTCAGGT+TGG + chr7.1:7535483-7535502 None:intergenic 35.0%
TGGTTATGAAACACTCTGTT+TGG - chr7.1:7534754-7534773 MS.gene36529:intron 35.0%
TTTCTCATCTTTGCTTCTGA+TGG - chr7.1:7535496-7535515 MS.gene36529:intron 35.0%
! GAAAACTCTGATAGTGTTTC+AGG - chr7.1:7535191-7535210 MS.gene36529:intron 35.0%
! GTTTTACAGCTGAAGATCAA+GGG - chr7.1:7534430-7534449 MS.gene36529:intron 35.0%
! TCACTCCTTGTTCAATCTTT+TGG + chr7.1:7535744-7535763 None:intergenic 35.0%
! TGAGAGCATACTCTTGAAAT+TGG + chr7.1:7533998-7534017 None:intergenic 35.0%
! TTTTTCTTATGCAACGGTCA+AGG - chr7.1:7535031-7535050 MS.gene36529:CDS 35.0%
!! ACTGAGAATTGGCTTGAAAA+AGG + chr7.1:7535431-7535450 None:intergenic 35.0%
!! AGTTGGTAGCCTTATAATTG+CGG - chr7.1:7535150-7535169 MS.gene36529:CDS 35.0%
!! ATTGGCTTGAAAAAGGTTTC+AGG + chr7.1:7535424-7535443 None:intergenic 35.0%
!! GGAAAGTTGATGGATTGTTA+TGG - chr7.1:7533773-7533792 MS.gene36529:CDS 35.0%
!! TGATGGATTGTTATGGTACA+AGG - chr7.1:7533780-7533799 MS.gene36529:CDS 35.0%
ACACCTATAAAGGTTCCTTG+AGG + chr7.1:7533919-7533938 None:intergenic 40.0%
ATCATGCTGGAAATCAACTG+TGG - chr7.1:7533726-7533745 MS.gene36529:CDS 40.0%
ATCTTATAACCTCAAGGGAC+GGG - chr7.1:7534297-7534316 MS.gene36529:intron 40.0%
CTTCAGATATGCATCACCTA+TGG + chr7.1:7535356-7535375 None:intergenic 40.0%
GACCTCCAAAAGATTGAACA+AGG - chr7.1:7535736-7535755 MS.gene36529:CDS 40.0%
GATCTTATAACCTCAAGGGA+CGG - chr7.1:7534296-7534315 MS.gene36529:intron 40.0%
GATGTGAAAGGGAAAGTTGA+TGG - chr7.1:7533763-7533782 MS.gene36529:CDS 40.0%
GCATCATACAGGTACAAACT+TGG - chr7.1:7534787-7534806 MS.gene36529:intron 40.0%
TCAGGTAGTCTAAACTTCTG+TGG + chr7.1:7535406-7535425 None:intergenic 40.0%
TCATAGGTCCTGATTCAAGT+TGG + chr7.1:7533879-7533898 None:intergenic 40.0%
TCATGTAACAGGGAATAGCA+AGG - chr7.1:7535656-7535675 MS.gene36529:CDS 40.0%
TCCCGTAATCATTTGGTTGA+AGG + chr7.1:7535063-7535082 None:intergenic 40.0%
TCCCTATGATTCACAGATTG+TGG - chr7.1:7534734-7534753 MS.gene36529:intron 40.0%
TCTCCTCTTTCAATCAGAGA+TGG - chr7.1:7535844-7535863 MS.gene36529:CDS 40.0%
TCTGATTATTTGGGTCCTCA+AGG - chr7.1:7533901-7533920 MS.gene36529:CDS 40.0%
TGTCTCTTGTGAAGAAGCAA+TGG - chr7.1:7534505-7534524 MS.gene36529:intron 40.0%
TTGCAGGTTTCAAGATCCAT+AGG - chr7.1:7535337-7535356 MS.gene36529:intron 40.0%
TTTCTGCGACCGCAATTATA+AGG + chr7.1:7535162-7535181 None:intergenic 40.0%
! AGATTTGTTTCCTGTCCATG+AGG - chr7.1:7534248-7534267 MS.gene36529:intron 40.0%
! CTCCTTGTTCAATCTTTTGG+AGG + chr7.1:7535741-7535760 None:intergenic 40.0%
! GCATTTTCTGCAACAGATGA+TGG - chr7.1:7534477-7534496 MS.gene36529:intron 40.0%
! GGTTTTACAGCTGAAGATCA+AGG - chr7.1:7534429-7534448 MS.gene36529:intron 40.0%
! TTGGCAGGGATAATTTGCAA+TGG - chr7.1:7534567-7534586 MS.gene36529:intron 40.0%
AACCAAATGATTACGGGACG+CGG - chr7.1:7535065-7535084 MS.gene36529:CDS 45.0%
AAGAGTGAGGAAGGGAACAA+GGG - chr7.1:7534635-7534654 MS.gene36529:intron 45.0%
AATTTGAATCCCGTCCCTTG+AGG + chr7.1:7534309-7534328 None:intergenic 45.0%
ACGCGGCAAGGTTTAAATTG+TGG - chr7.1:7535082-7535101 MS.gene36529:CDS 45.0%
AGTCTAAACTTCTGTGGCAG+AGG + chr7.1:7535400-7535419 None:intergenic 45.0%
ATCCGCTGGTACATGTTGTT+TGG - chr7.1:7534548-7534567 MS.gene36529:intron 45.0%
ATGCTGGAAATCAACTGTGG+AGG - chr7.1:7533729-7533748 MS.gene36529:CDS 45.0%
CTCTTTCAATCAGAGATGGC+AGG - chr7.1:7535848-7535867 MS.gene36529:CDS 45.0%
CTGCCATCTCTGATTGAAAG+AGG + chr7.1:7535850-7535869 None:intergenic 45.0%
GAAACGAAGCTTACATTGCG+TGG + chr7.1:7535574-7535593 None:intergenic 45.0%
GATCGTAGCCAACTTGAATC+AGG - chr7.1:7533868-7533887 MS.gene36529:CDS 45.0%
GATGGCTCACTACTGAGAAT+TGG + chr7.1:7535442-7535461 None:intergenic 45.0%
GGTCCTCAAGGAACCTTTAT+AGG - chr7.1:7533913-7533932 MS.gene36529:CDS 45.0%
GGTGTTTATGATGGTCATGG+TGG - chr7.1:7533934-7533953 MS.gene36529:intron 45.0%
GTGTTAGGAAGAGTGAGGAA+GGG - chr7.1:7534627-7534646 MS.gene36529:intron 45.0%
TACGGCGACTCTTGTGATTA+TGG + chr7.1:7534151-7534170 None:intergenic 45.0%
TGCAAATGCAGGAGACTCAA+GGG - chr7.1:7534602-7534621 MS.gene36529:intron 45.0%
TGCCAAACAACATGTACCAG+CGG + chr7.1:7534553-7534572 None:intergenic 45.0%
TGCTGGAAATCAACTGTGGA+GGG - chr7.1:7533730-7533749 MS.gene36529:CDS 45.0%
TGTAACAGGGAATAGCAAGG+AGG - chr7.1:7535659-7535678 MS.gene36529:CDS 45.0%
TGTGTTAGGAAGAGTGAGGA+AGG - chr7.1:7534626-7534645 MS.gene36529:intron 45.0%
TTGCAAATGCAGGAGACTCA+AGG - chr7.1:7534601-7534620 MS.gene36529:intron 45.0%
! CTGGTACATGTTGTTTGGCA+GGG - chr7.1:7534553-7534572 MS.gene36529:intron 45.0%
!! GTGGTGATGGAGATGTGAAA+GGG - chr7.1:7533752-7533771 MS.gene36529:CDS 45.0%
AAACCACAGATAGCATCCGC+TGG - chr7.1:7534534-7534553 MS.gene36529:intron 50.0%
CAACTCTAGGCAACACCTCA+TGG + chr7.1:7534266-7534285 None:intergenic 50.0%
CACTCTGTTTGGCGTGTGAA+AGG - chr7.1:7534765-7534784 MS.gene36529:intron 50.0%
GAAGAGTGAGGAAGGGAACA+AGG - chr7.1:7534634-7534653 MS.gene36529:intron 50.0%
TGGAAATCAACTGTGGAGGG+TGG - chr7.1:7533733-7533752 MS.gene36529:CDS 50.0%
! GCTGGTACATGTTGTTTGGC+AGG - chr7.1:7534552-7534571 MS.gene36529:intron 50.0%
!! CATGAGGTGTTGCCTAGAGT+TGG - chr7.1:7534264-7534283 MS.gene36529:intron 50.0%
!! GCGTGTGAAAGGCATCATAC+AGG - chr7.1:7534776-7534795 MS.gene36529:intron 50.0%
!! GGTGGTGATGGAGATGTGAA+AGG - chr7.1:7533751-7533770 MS.gene36529:CDS 50.0%
AATGATTACGGGACGCGGCA+AGG - chr7.1:7535070-7535089 MS.gene36529:CDS 55.0%
CTAGGCAACACCTCATGGAC+AGG + chr7.1:7534261-7534280 None:intergenic 55.0%
GGAGACTCAAGGGCTGTGTT+AGG - chr7.1:7534612-7534631 MS.gene36529:intron 55.0%
GGGCTGTGTTAGGAAGAGTG+AGG - chr7.1:7534622-7534641 MS.gene36529:intron 55.0%
GTACCAGCGGATGCTATCTG+TGG + chr7.1:7534540-7534559 None:intergenic 55.0%
TATTCTTCGCAGCTGCGTGC+AGG + chr7.1:7534958-7534977 None:intergenic 55.0%
TCAACTGTGGAGGGTGGTGA+TGG - chr7.1:7533739-7533758 MS.gene36529:CDS 55.0%
TGCCGCGTCCCGTAATCATT+TGG + chr7.1:7535070-7535089 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 7533718 7535885 7533718 ID=MS.gene36529
chr7.1 mRNA 7533718 7535885 7533718 ID=MS.gene36529.t1;Parent=MS.gene36529
chr7.1 exon 7535597 7535885 7535597 ID=MS.gene36529.t1.exon1;Parent=MS.gene36529.t1
chr7.1 CDS 7535597 7535885 7535597 ID=cds.MS.gene36529.t1;Parent=MS.gene36529.t1
chr7.1 exon 7534806 7535173 7534806 ID=MS.gene36529.t1.exon2;Parent=MS.gene36529.t1
chr7.1 CDS 7534806 7535173 7534806 ID=cds.MS.gene36529.t1;Parent=MS.gene36529.t1
chr7.1 exon 7534024 7534260 7534024 ID=MS.gene36529.t1.exon3;Parent=MS.gene36529.t1
chr7.1 CDS 7534024 7534260 7534024 ID=cds.MS.gene36529.t1;Parent=MS.gene36529.t1
chr7.1 exon 7533718 7533936 7533718 ID=MS.gene36529.t1.exon4;Parent=MS.gene36529.t1
chr7.1 CDS 7533718 7533936 7533718 ID=cds.MS.gene36529.t1;Parent=MS.gene36529.t1
Gene Sequence

>MS.gene36529

ATGACTATATCATGCTGGAAATCAACTGTGGAGGGTGGTGATGGAGATGTGAAAGGGAAAGTTGATGGATTGTTATGGTACAAGGATTTGGGAAACCATCTTTATGGTGAATTTTCAATGGCTGTAATTCAAGCAAATAGTTCATTGGAGGATCGTAGCCAACTTGAATCAGGACCTATGAGTTCTGATTATTTGGGTCCTCAAGGAACCTTTATAGGTGTTTATGATGGTCATGGTGGAACTGCAGCTGCTCAGTTTGTTAATGACAATCTATTCTCCAATTTCAAGAGTATGCTCTCAACTTTTATTACAAACATATATTGGAAATATGGATTTGCTGTACGATGTTTTTCAATTGAATTGAATCCTAGAAAAACCAAGTAACTTATATCCAACTATTAAGTGCATGTTTGGAATCACAGTCCTTTTTCCATAATCACAAGAGTCGCCGTAATTTTGACAAAAACTACGTACATGAAGCTTTAATTGTGATTTTGTCAAAATTATCGTGATTCCGAACATATACTGAAAGATTTGTTTCCTGTCCATGAGGTGTTGCCTAGAGTTGGCAATAGTTTGATCTTATAACCTCAAGGGACGGGATTCAAATTCTTTCTGAAATAGTTGTAAATTGGTCGTTAGTACCGCTGTAATTATTGGTATATAAAACACCGGTATTCTTATATATTGATTTTTTTTGTGTGTAAATCAGGTTTTACAGCTGAAGATCAAGGGATTTCAGAAAAGGTTATCAAAAGGGCATTTTCTGCAACAGATGATGGTTTTCTGTCTCTTGTGAAGAAGCAATGGCAAAGCAAACCACAGATAGCATCCGCTGGTACATGTTGTTTGGCAGGGATAATTTGCAATGGTATGCTGTATATTGCAAATGCAGGAGACTCAAGGGCTGTGTTAGGAAGAGTGAGGAAGGGAACAAGGGAAACATTAGCTGTTCAGTTATCTACTGAACACAATGTTAATATAGAAACTGAGAGAGATGATGTTCGGTCAAAGCATCCCTATGATTCACAGATTGTGGTTATGAAACACTCTGTTTGGCGTGTGAAAGGCATCATACAGGTACAAACTTGGGAGATTCATATTGCTTTTTTTATTATTAAGTATGATTTTGGACTCTAGTAACACAACCAATTTACTTGTTATGATCTCCACTGTATGATTGAAATTATAGAGTAGGAAATTAGCTGCAACAAACTAATTGGTAAACTAAGGTATTCCTGCACGCAGCTGCGAAGAATAAACTCTCAAAGTAACTGAGATCTATTTAACAGATTGACCTTTCCCAGCATATGTTTTTCTTATGCAACGGTCAAGGATCGAACCTTCAACCAAATGATTACGGGACGCGGCAAGGTTTAAATTGTGGTTGCAATTGCGATAGTTAATATTGTAGAGAATCGTAGTTAAATGTAGTTGGTAGCCTTATAATTGCGGTCGCAGAAACATATGAAAGAAAACTCTGATAGTGTTTCAGGTTGCAGTCTCTGAATTTTTAGAACTTGCCGTTAATATTACCTAGAAATCTTATTTTTTTTAAGTTTCTATATGGTAAATTAAAACCATATGTTACTCCAATTTTGTGTTAACAGAACTTGTTTTTGCAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAGGGAGCCTCTGCCACAGAAGTTTAGACTACCTGAAACCTTTTTCAAGCCAATTCTCAGTAGTGAGCCATCAATATCAATTCATAAAATCCAACCTGAAGATCAATTTCTCATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGTAGCTGTGAATATCGTTAGCAACAATCCACGCAATGTAAGCTTCGTTTCTGTCAAAATTAAAGGATGTTTTTCTTTTTCTTATTTAAAAGCTCTTTTGTGACAACTATGATTCATGTAACAGGGAATAGCAAGGAGGCTTGTGAAAGCAGCACTTAAAGAAGCAGCGAAGAAGCGAGAAATAAGATTATCAGACCTCCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATATCTAAATCCAAAACTGATTGATAATAGCTCTCTATGGAGTTCTCCTCTTTCAATCAGAGATGGCAGGCATGTCAATTCCTAG
Protein sequence

>MS.gene36529.t1

MTISCWKSTVEGGDGDVKGKVDGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPMSSDYLGPQGTFIGVYDGHGGTAAAQFVNDNLFSNFKSFTAEDQGISEKVIKRAFSATDDGFLSLVKKQWQSKPQIASAGTCCLAGIICNGMLYIANAGDSRAVLGRVRKGTRETLAVQLSTEHNVNIETERDDVRSKHPYDSQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLPQKFRLPETFFKPILSSEPSISIHKIQPEDQFLIFASDGLWEHLSNQVAVNIVSNNPRNGIARRLVKAALKEAAKKREIRLSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSSLWSSPLSIRDGRHVNS