AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36979

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36979.t1 MTR_8g013560 92.991 428 29 1 1 428 1 427 0.0 816
MS.gene36979.t1 MTR_8g013610 87.037 432 53 3 1 430 1 431 0.0 766
MS.gene36979.t1 MTR_8g013600 83.063 431 72 1 1 431 1 430 0.0 738
MS.gene36979.t1 MTR_8g013580 82.436 427 72 3 3 428 10 434 0.0 704
MS.gene36979.t1 MTR_8g013620 78.704 432 88 4 1 429 1 431 0.0 672
MS.gene36979.t1 MTR_8g013620 78.654 431 88 4 1 428 1 430 0.0 669
MS.gene36979.t1 MTR_8g013620 78.654 431 88 4 1 428 1 430 0.0 667
MS.gene36979.t1 MTR_8g013620 78.654 431 88 4 1 428 1 430 0.0 666
MS.gene36979.t1 MTR_2g011340 45.227 440 225 9 1 428 1 436 2.00e-126 386
MS.gene36979.t1 MTR_2g011270 46.265 415 209 8 26 430 6 416 4.35e-124 379
MS.gene36979.t1 MTR_2g011280 45.475 442 221 9 1 428 1 436 1.32e-119 368
MS.gene36979.t1 MTR_7g056647 43.855 415 224 6 13 423 18 427 1.96e-117 363
MS.gene36979.t1 MTR_7g056667 42.657 429 237 6 4 428 1 424 2.30e-117 362
MS.gene36979.t1 MTR_7g056663 44.550 422 222 9 13 428 12 427 1.08e-116 361
MS.gene36979.t1 MTR_7g056617 42.326 430 237 7 4 428 9 432 4.99e-114 349
MS.gene36979.t1 MTR_2g011230 43.721 430 226 8 11 428 4 429 8.49e-113 350
MS.gene36979.t1 MTR_7g056420 43.590 429 230 8 9 428 344 769 1.55e-111 353
MS.gene36979.t1 MTR_7g056430 43.590 429 230 8 9 428 344 769 4.00e-111 353
MS.gene36979.t1 MTR_7g056680 42.958 426 235 6 9 430 7 428 4.09e-111 345
MS.gene36979.t1 MTR_7g056680 42.958 426 235 6 9 430 7 428 4.98e-111 345
MS.gene36979.t1 MTR_7g056680 42.925 424 234 6 9 428 7 426 4.53e-110 343
MS.gene36979.t1 MTR_7g056680 42.925 424 234 6 9 428 7 426 6.27e-110 342
MS.gene36979.t1 MTR_7g056510 42.184 403 220 6 30 428 28 421 6.45e-108 329
MS.gene36979.t1 MTR_7g056510 42.184 403 220 6 30 428 28 421 7.02e-107 328
MS.gene36979.t1 MTR_7g056450 40.654 428 226 9 12 429 25 434 1.21e-106 330
MS.gene36979.t1 MTR_7g056623 44.757 391 208 5 42 428 20 406 1.56e-106 335
MS.gene36979.t1 MTR_7g056640 42.092 411 225 6 30 436 56 457 4.65e-106 333
MS.gene36979.t1 MTR_7g056510 42.184 403 220 6 30 428 28 421 4.80e-106 329
MS.gene36979.t1 MTR_7g056510 42.184 403 220 6 30 428 28 421 1.18e-105 329
MS.gene36979.t1 MTR_2g011240 42.959 419 219 10 26 430 6 418 3.63e-105 330
MS.gene36979.t1 MTR_7g056450 40.654 428 226 9 12 429 15 424 4.37e-105 330
MS.gene36979.t1 MTR_7g056510 42.054 409 224 6 24 428 12 411 5.51e-105 330
MS.gene36979.t1 MTR_4g098890 42.895 373 204 5 30 397 605 973 1.03e-97 320
MS.gene36979.t1 MTR_4g098890 43.939 132 72 1 297 428 1364 1493 2.00e-30 125
MS.gene36979.t1 MTR_4g091570 38.386 409 236 9 30 429 256 657 1.34e-78 263
MS.gene36979.t1 MTR_2g011150 33.860 443 258 12 6 429 2 428 5.57e-71 239
MS.gene36979.t1 MTR_2g081470 35.071 422 247 10 26 434 20 427 1.67e-69 235
MS.gene36979.t1 MTR_4g091760 34.483 435 242 13 20 429 18 434 6.45e-69 234
MS.gene36979.t1 MTR_2g011180 34.856 416 239 13 32 428 30 432 1.05e-67 229
MS.gene36979.t1 MTR_7g056647 41.948 267 150 3 160 423 1 265 1.41e-67 228
MS.gene36979.t1 MTR_4g091800 33.563 435 257 12 15 429 28 450 1.52e-67 227
MS.gene36979.t1 MTR_4g040480 35.214 443 238 17 9 429 7 422 2.35e-67 229
MS.gene36979.t1 MTR_2g081520 34.014 441 253 13 13 431 4 428 2.81e-67 225
MS.gene36979.t1 MTR_2g011180 34.856 416 239 13 32 428 30 432 4.37e-67 229
MS.gene36979.t1 MTR_4g091690 33.407 452 261 13 3 429 20 456 5.73e-67 229
MS.gene36979.t1 MTR_2g011160 32.432 444 259 13 5 428 3 425 7.09e-67 225
MS.gene36979.t1 MTR_2g081520 34.014 441 253 13 13 431 4 428 1.11e-66 225
MS.gene36979.t1 MTR_4g091780 35.068 442 250 15 11 429 14 441 1.14e-66 228
MS.gene36979.t1 MTR_2g089360 33.489 427 252 15 21 428 19 432 1.21e-66 228
MS.gene36979.t1 MTR_4g091670 32.438 447 256 16 12 429 4 433 1.46e-66 224
MS.gene36979.t1 MTR_2g081520 34.266 429 248 12 13 423 4 416 1.47e-66 224
MS.gene36979.t1 MTR_6g012810 33.411 428 237 14 26 428 121 525 1.72e-66 226
MS.gene36979.t1 MTR_2g081520 34.014 441 253 13 13 431 4 428 2.28e-66 225
MS.gene36979.t1 MTR_2g011160 32.584 445 259 13 5 429 3 426 3.07e-66 227
MS.gene36979.t1 MTR_3g019530 32.388 423 256 10 28 436 28 434 3.82e-66 226
MS.gene36979.t1 MTR_3g019530 32.289 415 251 10 28 428 28 426 3.96e-66 222
MS.gene36979.t1 MTR_3g019530 32.289 415 251 10 28 428 28 426 4.28e-66 222
MS.gene36979.t1 MTR_4g091670 32.438 447 256 16 12 429 4 433 4.32e-66 224
MS.gene36979.t1 MTR_2g089440 35.024 414 242 14 32 428 32 435 5.31e-66 225
MS.gene36979.t1 MTR_4g081655 33.092 414 250 9 28 423 58 462 5.36e-66 224
MS.gene36979.t1 MTR_4g091820 33.563 435 257 12 15 429 28 450 6.09e-66 228
MS.gene36979.t1 MTR_6g012810 33.411 428 237 14 26 428 121 525 9.84e-66 226
MS.gene36979.t1 MTR_8g465580 32.719 434 261 14 11 428 8 426 1.02e-65 222
MS.gene36979.t1 MTR_2g081520 33.333 441 256 13 13 431 4 428 1.03e-65 225
MS.gene36979.t1 MTR_8g465470 33.025 433 260 14 11 428 40 457 1.86e-65 225
MS.gene36979.t1 MTR_4g081655 33.092 414 250 9 28 423 58 462 1.94e-65 224
MS.gene36979.t1 MTR_4g081655 33.092 414 250 9 28 423 23 427 1.95e-65 224
MS.gene36979.t1 MTR_2g081520 33.566 429 251 12 13 423 4 416 3.26e-65 224
MS.gene36979.t1 MTR_4g091670 32.438 447 256 16 12 429 4 433 3.76e-65 224
MS.gene36979.t1 MTR_7g056590 41.758 273 153 4 160 428 1 271 4.10e-65 221
MS.gene36979.t1 MTR_0280s0040 33.028 436 267 16 11 428 6 434 4.45e-65 223
MS.gene36979.t1 MTR_7g056680 43.382 272 149 4 160 428 1 270 1.00e-64 219
MS.gene36979.t1 MTR_3g007630 33.958 427 246 11 30 431 27 442 1.21e-64 223
MS.gene36979.t1 MTR_8g465410 32.426 441 267 14 4 428 1 426 1.36e-64 222
MS.gene36979.t1 MTR_3g019530 32.289 415 251 10 28 428 28 426 1.77e-64 222
MS.gene36979.t1 MTR_3g019530 32.289 415 251 10 28 428 28 426 1.80e-64 222
MS.gene36979.t1 MTR_3g019580 31.828 443 266 12 6 428 15 441 2.51e-64 218
MS.gene36979.t1 MTR_3g019580 32.000 450 270 12 6 435 15 448 2.66e-64 221
MS.gene36979.t1 MTR_4g081685 32.420 438 261 13 11 428 8 430 5.22e-64 221
MS.gene36979.t1 MTR_0090s0020 34.332 434 252 14 11 429 8 423 5.85e-64 218
MS.gene36979.t1 MTR_2g081500 32.414 435 263 12 10 428 5 424 6.27e-64 220
MS.gene36979.t1 MTR_3g007650 32.589 448 262 12 8 426 2 438 6.44e-64 220
MS.gene36979.t1 MTR_4g081675 32.407 432 268 11 11 428 8 429 7.90e-64 220
MS.gene36979.t1 MTR_8g465980 35.337 416 237 14 21 422 16 413 8.57e-64 219
MS.gene36979.t1 MTR_3g019580 31.828 443 266 12 6 428 15 441 1.03e-63 217
MS.gene36979.t1 MTR_3g007510 33.778 450 254 13 12 431 7 442 1.08e-63 219
MS.gene36979.t1 MTR_2g011190 35.550 436 240 17 11 429 14 425 1.59e-63 219
MS.gene36979.t1 MTR_0090s0020 34.332 434 252 14 11 429 8 423 1.90e-63 218
MS.gene36979.t1 MTR_0090s0020 34.332 434 252 14 11 429 8 423 2.02e-63 217
MS.gene36979.t1 MTR_4g081650 32.289 415 250 9 28 428 24 421 2.32e-63 219
MS.gene36979.t1 MTR_4g091850 34.884 430 244 13 21 429 35 449 3.88e-63 218
MS.gene36979.t1 MTR_0090s0020 34.332 434 252 14 11 429 8 423 4.28e-63 218
MS.gene36979.t1 MTR_3g007510 33.781 447 252 13 12 428 7 439 5.02e-63 218
MS.gene36979.t1 MTR_3g007510 33.781 447 252 13 12 428 7 439 5.89e-63 218
MS.gene36979.t1 MTR_3g019580 31.828 443 266 12 6 428 12 438 6.65e-63 218
MS.gene36979.t1 MTR_8g465510 33.778 450 253 19 1 427 1 428 1.14e-62 216
MS.gene36979.t1 MTR_4g081730 32.339 436 263 12 14 428 5 429 1.51e-62 214
MS.gene36979.t1 MTR_8g465990 31.116 421 262 9 25 429 23 431 1.96e-62 213
MS.gene36979.t1 MTR_4g091840 32.500 440 255 15 15 429 28 450 3.08e-62 216
MS.gene36979.t1 MTR_4g081750 32.692 416 249 9 28 429 24 422 2.33e-61 216
MS.gene36979.t1 MTR_4g081750 31.321 265 159 6 174 428 521 772 2.36e-33 134
MS.gene36979.t1 MTR_8g465990 31.116 421 262 9 25 429 23 431 2.91e-61 213
MS.gene36979.t1 MTR_5g055070 32.333 433 264 14 11 426 1 421 3.19e-61 211
MS.gene36979.t1 MTR_4g091680 32.930 413 235 10 38 433 57 444 3.57e-61 213
MS.gene36979.t1 MTR_8g465990 31.116 421 262 9 25 429 23 431 4.70e-61 212
MS.gene36979.t1 MTR_5g055070 32.333 433 264 14 11 426 1 421 6.17e-61 211
MS.gene36979.t1 MTR_5g055070 32.333 433 264 14 11 426 1 421 9.58e-61 211
MS.gene36979.t1 MTR_3g020280 29.841 439 269 11 13 428 7 429 1.57e-60 211
MS.gene36979.t1 MTR_4g081640 31.905 420 250 10 28 423 23 430 2.73e-60 210
MS.gene36979.t1 MTR_3g019500 29.567 416 259 10 32 428 32 432 5.08e-60 206
MS.gene36979.t1 MTR_4g081665 32.207 444 264 12 1 429 1 422 5.57e-60 209
MS.gene36979.t1 MTR_3g019500 29.567 416 259 10 32 428 32 432 1.98e-59 206
MS.gene36979.t1 MTR_5g067250 35.104 433 248 17 10 423 9 427 2.23e-59 207
MS.gene36979.t1 MTR_3g020330 29.977 437 271 11 13 429 7 428 4.46e-59 206
MS.gene36979.t1 MTR_2g011210 34.346 428 231 17 26 429 30 431 5.29e-59 207
MS.gene36979.t1 MTR_3g019500 29.524 420 262 10 28 428 28 432 1.60e-58 205
MS.gene36979.t1 MTR_3g019420 30.068 439 265 13 13 428 7 426 6.76e-58 204
MS.gene36979.t1 MTR_3g020230 28.889 450 269 12 15 435 9 436 7.12e-58 203
MS.gene36979.t1 MTR_3g007590 34.351 393 220 13 11 381 9 385 7.24e-58 195
MS.gene36979.t1 MTR_3g019390 29.613 439 274 12 9 428 3 425 1.53e-57 200
MS.gene36979.t1 MTR_5g067290 33.094 417 228 16 26 423 27 411 5.95e-57 193
MS.gene36979.t1 MTR_3g020320 29.861 432 270 11 14 428 14 429 9.76e-57 200
MS.gene36979.t1 MTR_3g019390 29.613 439 274 12 9 428 3 425 1.06e-56 200
MS.gene36979.t1 MTR_7g056650 41.909 241 136 3 190 428 33 271 8.10e-56 198
MS.gene36979.t1 MTR_7g056650 44.240 217 115 4 30 242 673 887 5.50e-49 179
MS.gene36979.t1 MTR_4g091860 32.176 432 257 15 21 430 15 432 1.04e-55 197
MS.gene36979.t1 MTR_3g051420 30.201 447 268 13 11 435 11 435 1.87e-55 196
MS.gene36979.t1 MTR_7g056537 39.051 274 152 7 5 268 97 365 4.52e-55 187
MS.gene36979.t1 MTR_2g011170 30.108 465 238 16 11 428 4 428 3.96e-53 187
MS.gene36979.t1 MTR_3g019490 29.519 437 265 11 11 428 11 423 5.81e-53 190
MS.gene36979.t1 MTR_2g011170 30.108 465 238 16 11 428 4 428 4.58e-52 187
MS.gene36979.t1 MTR_8g465570 28.868 433 239 13 11 428 9 387 7.82e-49 178
MS.gene36979.t1 MTR_1g033510 32.033 359 179 10 53 398 1 307 3.90e-47 165
MS.gene36979.t1 MTR_3g019390 29.345 351 218 9 92 428 1 335 3.35e-43 160
MS.gene36979.t1 MTR_1g052880 27.922 462 266 17 11 428 1 439 6.00e-43 162
MS.gene36979.t1 MTR_6g471820 29.586 338 210 8 113 436 24 347 6.19e-43 158
MS.gene36979.t1 MTR_4g091730 30.303 429 206 15 20 429 18 372 2.18e-41 157
MS.gene36979.t1 MTR_2g089290 28.924 446 258 23 13 428 12 428 6.82e-36 141
MS.gene36979.t1 MTR_8g465160 28.266 421 250 16 11 410 10 399 6.82e-33 132
MS.gene36979.t1 MTR_8g030500 25.298 419 253 19 38 425 21 410 5.48e-31 126
MS.gene36979.t1 MTR_8g465150 27.805 410 246 14 12 402 7 385 2.11e-29 121
MS.gene36979.t1 MTR_2g089440 32.701 211 126 8 226 428 1 203 3.15e-25 108
MS.gene36979.t1 MTR_7g056670 59.211 76 31 0 30 105 6 81 4.49e-24 95.5
MS.gene36979.t1 MTR_8g061110 27.523 327 204 10 111 428 4 306 1.96e-23 103
MS.gene36979.t1 MTR_3g031600 25.843 445 271 20 11 427 4 417 2.60e-22 100
MS.gene36979.t1 MTR_3g031610 26.424 439 264 21 12 424 7 412 1.93e-21 97.8
MS.gene36979.t1 MTR_0148s0080 25.974 462 240 22 10 411 9 428 3.16e-21 97.1
MS.gene36979.t1 MTR_1g099400 24.283 453 271 21 20 423 6 435 5.21e-21 96.3
MS.gene36979.t1 MTR_3g102400 24.798 371 244 16 39 393 36 387 3.90e-20 93.6
MS.gene36979.t1 MTR_7g058830 25.455 440 269 19 11 424 13 419 4.22e-20 93.6
MS.gene36979.t1 MTR_3g031640 25.397 441 268 21 12 424 7 414 7.75e-20 92.8
MS.gene36979.t1 MTR_3g031580 24.570 407 252 17 40 424 34 407 9.86e-20 92.4
MS.gene36979.t1 MTR_3g031480 25.526 380 227 17 40 393 34 383 1.23e-19 92.0
MS.gene36979.t1 MTR_7g058860 25.962 416 240 21 41 424 39 418 1.97e-19 91.7
MS.gene36979.t1 MTR_4g094858 25.901 444 261 22 12 424 12 418 2.20e-19 91.3
MS.gene36979.t1 MTR_3g031470 25.959 339 204 15 4 314 1 320 1.92e-18 88.6
MS.gene36979.t1 MTR_7g053050 24.769 432 266 19 22 424 17 418 2.26e-18 88.2
MS.gene36979.t1 MTR_8g442270 33.099 142 89 4 76 213 84 223 8.17e-18 86.7
MS.gene36979.t1 MTR_8g442310 35.252 139 87 2 77 213 50 187 8.67e-17 83.2
MS.gene36979.t1 MTR_8g052080 26.943 193 133 3 24 213 25 212 2.25e-16 82.0
MS.gene36979.t1 MTR_7g058550 23.415 410 257 18 41 424 40 418 2.98e-16 81.6
MS.gene36979.t1 MTR_8g442370 32.000 150 100 2 65 213 73 221 4.93e-16 80.9
MS.gene36979.t1 MTR_7g056653 50.746 67 33 0 362 428 2 68 6.92e-16 76.6
MS.gene36979.t1 MTR_8g051600 27.468 233 150 8 24 245 27 251 2.03e-15 79.0
MS.gene36979.t1 MTR_8g052050 25.000 228 159 6 24 245 26 247 2.38e-15 79.0
MS.gene36979.t1 MTR_7g115260 33.133 166 76 7 287 429 2 155 6.33e-15 72.4
MS.gene36979.t1 MTR_8g051540 30.935 139 93 2 77 213 89 226 8.26e-15 77.0
MS.gene36979.t1 MTR_8g051640 35.593 118 73 2 77 192 89 205 1.01e-14 77.0
MS.gene36979.t1 MTR_4g133080 39.560 91 45 2 3 91 6 88 1.10e-14 70.1
MS.gene36979.t1 MTR_8g442290 30.216 139 94 2 77 213 88 225 1.50e-14 76.3
MS.gene36979.t1 MTR_4g114240 22.281 377 246 14 46 393 54 412 3.76e-14 75.1
MS.gene36979.t1 MTR_8g052190 25.833 240 166 8 24 255 26 261 7.12e-14 74.3
MS.gene36979.t1 MTR_8g052190 25.833 240 166 8 24 255 26 261 7.17e-14 74.3
MS.gene36979.t1 MTR_3g107070 25.066 379 218 17 39 396 29 362 8.79e-14 73.9
MS.gene36979.t1 MTR_8g442340 33.613 119 77 1 77 193 86 204 1.63e-13 73.2
MS.gene36979.t1 MTR_7g056593 42.683 82 44 2 3 83 53 132 2.30e-13 68.2
MS.gene36979.t1 MTR_2g080080 25.467 428 231 20 3 396 7 380 5.89e-13 71.2
MS.gene36979.t1 MTR_4g091560 38.824 85 51 1 156 239 56 140 7.85e-13 66.2
MS.gene36979.t1 MTR_1g012550 24.185 368 225 15 44 396 58 386 1.78e-12 70.1
MS.gene36979.t1 MTR_8g011430 32.026 153 90 7 44 193 50 191 8.65e-12 67.0
MS.gene36979.t1 MTR_4g114270 23.720 371 241 14 46 394 55 405 3.44e-11 65.9
MS.gene36979.t1 MTR_8g052120 27.660 141 97 3 76 213 56 194 7.32e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36979.t1 AT1G11330 41.446 415 221 11 30 428 31 439 4.44e-100 315
MS.gene36979.t1 AT1G11330 41.446 415 221 11 30 428 31 439 3.26e-99 315
MS.gene36979.t1 AT1G11330 41.446 415 221 11 30 428 31 439 3.85e-99 315
MS.gene36979.t1 AT1G11300 36.866 434 255 10 6 428 4 429 7.54e-93 297
MS.gene36979.t1 AT1G11300 36.866 434 255 10 6 428 4 429 1.05e-92 297
MS.gene36979.t1 AT1G11303 39.480 423 236 11 17 428 16 429 3.22e-89 288
MS.gene36979.t1 AT4G21390 38.952 439 233 16 11 429 9 432 3.23e-88 284
MS.gene36979.t1 AT1G11350 38.298 423 241 11 18 428 13 427 4.81e-88 285
MS.gene36979.t1 AT4G21390 38.952 439 233 16 11 429 9 432 9.51e-88 285
MS.gene36979.t1 AT1G61610 37.097 434 246 12 12 429 14 436 7.80e-86 278
MS.gene36979.t1 AT1G61610 37.097 434 246 12 12 429 14 436 3.51e-85 278
MS.gene36979.t1 AT1G61480 37.825 423 249 8 11 429 7 419 1.05e-84 276
MS.gene36979.t1 AT1G61550 38.424 406 232 8 31 429 20 414 2.50e-83 272
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 5.49e-82 263
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 5.49e-82 263
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 2 396 2.85e-81 261
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 1.00e-80 264
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 1.00e-80 264
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 34 428 1.04e-80 260
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 1.07e-80 264
MS.gene36979.t1 AT1G61440 36.973 403 242 6 32 430 19 413 2.52e-80 264
MS.gene36979.t1 AT1G61440 36.973 403 242 6 32 430 19 413 2.65e-80 264
MS.gene36979.t1 AT1G61440 36.973 403 242 6 32 430 19 413 3.31e-80 264
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 6.02e-80 263
MS.gene36979.t1 AT1G61430 36.407 423 255 8 13 430 6 419 7.32e-80 263
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 2 396 8.77e-80 261
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 2 396 5.71e-79 260
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 2 396 5.71e-79 260
MS.gene36979.t1 AT1G61430 36.881 404 242 7 31 430 2 396 5.71e-79 260
MS.gene36979.t1 AT1G61400 35.800 419 255 7 16 430 22 430 5.40e-78 258
MS.gene36979.t1 AT1G61400 36.186 409 249 6 26 430 30 430 6.45e-78 258
MS.gene36979.t1 AT1G61490 35.545 422 259 8 13 429 6 419 8.04e-78 258
MS.gene36979.t1 AT1G61490 35.545 422 259 8 13 429 6 419 8.04e-78 258
MS.gene36979.t1 AT1G61490 35.545 422 259 8 13 429 6 419 8.04e-78 258
MS.gene36979.t1 AT1G61490 35.545 422 259 8 13 429 6 419 8.04e-78 258
MS.gene36979.t1 AT1G61360 34.670 424 257 9 15 428 7 420 8.06e-75 250
MS.gene36979.t1 AT1G61420 36.634 404 242 7 31 429 25 419 4.82e-74 248
MS.gene36979.t1 AT1G61420 36.634 404 242 7 31 429 25 419 4.82e-74 248
MS.gene36979.t1 AT1G61420 36.634 404 242 7 31 429 25 419 4.98e-74 248
MS.gene36979.t1 AT1G61500 35.545 422 256 8 11 428 10 419 1.43e-73 246
MS.gene36979.t1 AT1G61500 35.545 422 256 8 11 428 15 424 2.00e-73 246
MS.gene36979.t1 AT1G11280 36.131 429 256 10 11 431 12 430 2.54e-73 243
MS.gene36979.t1 AT1G61370 35.222 406 252 8 31 429 26 427 3.06e-73 245
MS.gene36979.t1 AT1G61500 35.714 406 249 7 27 428 4 401 3.72e-73 244
MS.gene36979.t1 AT1G11280 36.066 427 255 10 11 429 12 428 3.04e-72 243
MS.gene36979.t1 AT1G11280 36.066 427 255 10 11 429 12 428 3.04e-72 243
MS.gene36979.t1 AT1G11280 36.066 427 255 10 11 429 22 438 3.17e-72 243
MS.gene36979.t1 AT1G11280 36.131 429 256 10 11 431 22 440 3.42e-72 243
MS.gene36979.t1 AT1G61380 34.579 428 265 8 11 431 5 424 1.49e-71 241
MS.gene36979.t1 AT1G61490 34.834 422 236 9 13 429 6 393 2.95e-71 239
MS.gene36979.t1 AT1G61490 34.834 422 236 9 13 429 6 393 2.95e-71 239
MS.gene36979.t1 AT1G61390 34.406 404 255 7 32 429 44 443 3.48e-70 238
MS.gene36979.t1 AT1G11410 33.411 428 248 11 23 429 18 429 6.87e-70 237
MS.gene36979.t1 AT1G11410 33.411 428 248 11 23 429 25 436 9.98e-70 236
MS.gene36979.t1 AT1G11340 34.679 421 240 10 30 429 88 494 1.25e-68 232
MS.gene36979.t1 AT1G11340 34.679 421 240 10 30 429 88 494 1.94e-68 232
MS.gene36979.t1 AT4G21380 33.643 431 238 13 24 428 24 432 2.39e-68 228
MS.gene36979.t1 AT1G11340 34.679 421 240 10 30 429 20 426 3.86e-68 232
MS.gene36979.t1 AT4G21380 33.643 431 238 13 24 428 24 432 7.90e-67 229
MS.gene36979.t1 AT1G65790 33.412 422 247 13 24 428 22 426 1.23e-66 224
MS.gene36979.t1 AT1G65790 33.412 422 247 13 24 428 22 426 1.23e-66 224
MS.gene36979.t1 AT1G11410 32.771 415 244 10 36 429 5 405 1.27e-66 228
MS.gene36979.t1 AT4G27290 31.050 438 265 12 13 428 6 428 7.28e-66 225
MS.gene36979.t1 AT4G27290 31.050 438 265 12 13 428 6 428 1.45e-65 225
MS.gene36979.t1 AT1G65790 33.412 422 247 13 24 428 22 426 5.74e-65 223
MS.gene36979.t1 AT1G61460 32.936 419 234 7 15 429 10 385 6.39e-65 222
MS.gene36979.t1 AT1G65800 33.647 425 247 14 22 428 23 430 1.02e-60 208
MS.gene36979.t1 AT1G65800 33.647 425 247 14 22 428 23 430 2.77e-59 208
MS.gene36979.t1 AT1G61360 34.706 340 214 6 93 428 4 339 2.22e-58 204
MS.gene36979.t1 AT1G61360 34.706 340 214 6 93 428 4 339 2.22e-58 204
MS.gene36979.t1 AT1G61360 34.706 340 214 6 93 428 4 339 2.22e-58 204
MS.gene36979.t1 AT2G19130 32.117 411 252 14 15 412 11 407 2.09e-57 202
MS.gene36979.t1 AT3G12000 33.162 389 214 15 30 392 33 401 2.90e-52 181
MS.gene36979.t1 AT4G27300 28.369 423 263 13 30 428 26 432 3.53e-47 174
MS.gene36979.t1 AT1G61490 35.036 274 171 4 157 429 2 269 5.08e-45 166
MS.gene36979.t1 AT1G61420 35.636 275 168 4 157 429 2 269 2.41e-44 164
MS.gene36979.t1 AT1G61420 35.636 275 168 4 157 429 2 269 2.56e-44 164
MS.gene36979.t1 AT1G61370 35.606 264 164 5 170 429 15 276 7.73e-44 163
MS.gene36979.t1 AT1G11410 30.841 321 192 8 125 429 8 314 1.50e-43 162
MS.gene36979.t1 AT4G03230 27.594 453 266 17 11 429 6 430 7.08e-43 161
MS.gene36979.t1 AT1G61390 32.971 276 180 4 157 429 2 275 3.50e-42 158
MS.gene36979.t1 AT4G03230 27.740 447 261 17 11 423 6 424 7.01e-42 159
MS.gene36979.t1 AT4G03230 27.740 447 261 17 11 423 6 424 7.01e-42 159
MS.gene36979.t1 AT1G61380 33.692 279 178 4 157 431 2 277 1.73e-41 156
MS.gene36979.t1 AT4G11900 28.810 479 262 23 1 428 1 451 1.07e-35 139
MS.gene36979.t1 AT4G11900 28.810 479 262 23 1 428 1 451 1.07e-35 139
MS.gene36979.t1 AT4G11900 28.810 479 262 23 1 428 1 451 1.74e-35 139
MS.gene36979.t1 AT4G11900 28.810 479 262 23 1 428 1 451 1.74e-35 139
MS.gene36979.t1 AT4G11900 28.631 482 265 23 1 431 1 454 2.02e-35 139
MS.gene36979.t1 AT4G11900 28.631 482 265 23 1 431 1 454 2.02e-35 139
MS.gene36979.t1 AT4G11900 28.810 479 262 23 1 428 1 451 2.30e-35 139
MS.gene36979.t1 AT4G11900 28.631 482 265 23 1 431 1 454 3.07e-35 139
MS.gene36979.t1 AT4G00340 26.596 376 242 12 31 393 20 374 2.68e-33 133
MS.gene36979.t1 AT4G00340 26.596 376 242 12 31 393 20 374 3.45e-33 133
MS.gene36979.t1 AT4G11900 28.224 411 222 21 68 431 1 385 8.13e-27 113
MS.gene36979.t1 AT4G11900 28.224 411 222 21 68 431 1 385 1.11e-26 113
MS.gene36979.t1 AT4G03230 25.568 352 209 13 97 423 29 352 2.32e-25 109
MS.gene36979.t1 AT3G16030 31.776 214 138 3 8 215 3 214 4.45e-25 108
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 2.35e-24 106
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 2.35e-24 106
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 2.35e-24 106
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 3.82e-24 105
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 4.49e-24 105
MS.gene36979.t1 AT3G16030 30.222 225 138 3 8 215 3 225 6.69e-24 105
MS.gene36979.t1 AT1G67520 29.851 201 128 3 27 216 22 220 2.44e-22 100
MS.gene36979.t1 AT1G67520 29.851 201 128 3 27 216 22 220 2.59e-22 100
MS.gene36979.t1 AT1G67520 29.851 201 128 3 27 216 29 227 3.72e-22 100
MS.gene36979.t1 AT1G67520 29.851 201 128 3 27 216 22 220 3.98e-22 99.8
MS.gene36979.t1 AT1G67520 29.851 201 128 3 27 216 22 220 4.02e-22 99.8
MS.gene36979.t1 AT5G18470 27.632 228 132 7 12 213 10 230 1.88e-19 90.5
MS.gene36979.t1 AT4G03230 22.687 335 215 12 112 423 11 324 3.66e-17 84.7
MS.gene36979.t1 AT4G03230 22.687 335 215 12 112 423 11 324 3.66e-17 84.7
MS.gene36979.t1 AT4G32300 25.798 376 214 18 44 396 48 381 9.52e-16 80.1
MS.gene36979.t1 AT5G24080 23.776 429 247 22 45 422 46 445 4.64e-15 78.2
MS.gene36979.t1 AT4G03230 23.273 275 170 9 170 423 13 267 1.85e-14 76.3
MS.gene36979.t1 AT4G03230 23.273 275 170 9 170 423 5 259 1.91e-14 76.3
MS.gene36979.t1 AT5G39370 32.824 131 78 4 68 191 1 128 5.38e-12 63.5
MS.gene36979.t1 AT2G41890 24.468 376 221 19 45 393 41 380 2.41e-11 66.2

Find 76 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGGTTGGTTGAATTTAA+TGG 0.156074 8.4:-77390653 None:intergenic
CCAACCGATACTTAGGAATT+TGG 0.211499 8.4:+77390666 MS.gene36979:CDS
TGGAATGGAGTTTAGGAAAT+TGG 0.233550 8.4:+77391440 MS.gene36979:CDS
AGTGAAACAAGATGGATTTA+AGG 0.261434 8.4:+77391531 MS.gene36979:CDS
ATTCTAAGAGACATCAATTC+TGG 0.263691 8.4:+77390884 MS.gene36979:CDS
CTCCATTCCACAGAATTCTT+TGG 0.278825 8.4:-77391427 None:intergenic
TGATGATGTAATGGCGTTAT+TGG 0.315426 8.4:-77390564 None:intergenic
TTCAGCTAGTCTTGAAAGAT+TGG 0.317024 8.4:+77391045 MS.gene36979:CDS
ATCGGTTGGTTGAATTTAAT+GGG 0.319103 8.4:-77390652 None:intergenic
CCATCAAAACAACTACAAAT+TGG 0.322395 8.4:-77391397 None:intergenic
TTCGCCGACAAAACTATGTT+TGG 0.323488 8.4:+77391229 MS.gene36979:CDS
AATTCTGTGGAATGGAGTTT+AGG 0.339148 8.4:+77391433 MS.gene36979:CDS
TTTGGCAAATTGTTCTTGTT+TGG 0.344187 8.4:+77391627 MS.gene36979:CDS
CTTGAAGTTTGTGTTGTTTG+AGG 0.347591 8.4:-77390615 None:intergenic
TCAATTCTGGAGCAACAATC+TGG 0.349758 8.4:+77390897 MS.gene36979:CDS
GTTTGCAATCCATATGTTGT+TGG 0.352562 8.4:-77390702 None:intergenic
AAGAAAATTCATTGGAGAAC+TGG 0.358757 8.4:+77391097 MS.gene36979:CDS
GGTTGAGTATATGAATAAAA+AGG 0.363567 8.4:+77391288 MS.gene36979:CDS
AGTGAAAATGATCCTTCTTC+AGG 0.364162 8.4:+77391016 MS.gene36979:CDS
GATTTGCAGAAATTTCCTTA+TGG 0.365708 8.4:+77391703 MS.gene36979:CDS
TATGGAAAATGCGGGCCATT+TGG 0.374538 8.4:+77391352 MS.gene36979:CDS
TCATACCAAATGAAAACTTC+TGG 0.377909 8.4:-77391073 None:intergenic
AAAGGAACTTCTTAGATTTG+AGG 0.378227 8.4:+77391306 MS.gene36979:CDS
TTAGCTGCAATTCTCATTGT+TGG 0.381166 8.4:-77390953 None:intergenic
ATTGCAGCTAACCAAGTAAC+AGG 0.400980 8.4:+77390965 MS.gene36979:CDS
TGTTTGAGGTTATTGTCTCT+TGG 0.407892 8.4:-77390601 None:intergenic
AATTCAACCAACCGATACTT+AGG 0.420702 8.4:+77390659 MS.gene36979:CDS
AATAAAATGTGCAACATATG+AGG 0.428692 8.4:-77390526 None:intergenic
GTTGATCTCTCAGCAAAATC+AGG 0.433915 8.4:-77391574 None:intergenic
CGAGTGCCGGGCGCAGAACT+TGG 0.434991 8.4:+77391745 MS.gene36979:CDS
GGTATGATAAGAAAATTCAT+TGG 0.439395 8.4:+77391089 MS.gene36979:CDS
TCAATGAGACCAACAACATA+TGG 0.454396 8.4:+77390693 MS.gene36979:CDS
ATTGTCACAATTCACAAAGA+TGG 0.459458 8.4:+77390755 MS.gene36979:CDS
CAAATGGTATCATCATCATT+TGG 0.459928 8.4:+77390801 MS.gene36979:CDS
CAATACATACAAAATATAGA+AGG 0.467196 8.4:-77391664 None:intergenic
CAACCACTCAAAGATTCAAA+TGG 0.469058 8.4:+77390731 MS.gene36979:CDS
CTCTTTCCTCACACAACCAT+TGG 0.478480 8.4:-77391464 None:intergenic
TGATCTCTTCATTCGAGTGC+CGG 0.480337 8.4:+77391732 MS.gene36979:CDS
CAAATGATGATGATACCATT+TGG 0.481124 8.4:-77390800 None:intergenic
GTTGGAACAGCTGCATCTGC+AGG 0.485926 8.4:-77390935 None:intergenic
TATGTGTGGAGAAGATTGTT+TGG 0.492076 8.4:+77391609 MS.gene36979:CDS
AAGAGATCAACTCCACCATA+AGG 0.497147 8.4:-77391718 None:intergenic
AGCCAAAGAATTCTGTGGAA+TGG 0.497638 8.4:+77391425 MS.gene36979:CDS
ACGCCAACCGTGTAAATACT+TGG 0.505062 8.4:-77391164 None:intergenic
ACAGCTAAACTTGATGATGC+AGG 0.506170 8.4:+77390854 MS.gene36979:CDS
TGGAGAACTGGTCCATGGAA+TGG 0.516660 8.4:+77391109 MS.gene36979:CDS
GCTGAATAATGTCCTGAAGA+AGG 0.518194 8.4:-77391028 None:intergenic
TTGCAGAAATTTCCTTATGG+TGG 0.518830 8.4:+77391706 MS.gene36979:CDS
ACCACATGGAACACTTAAGT+TGG 0.521143 8.4:+77391267 MS.gene36979:CDS
GATCTCTTCATTCGAGTGCC+GGG 0.522634 8.4:+77391733 MS.gene36979:CDS
GTAATATTGAACAAACCAAA+TGG 0.533659 8.4:+77390785 MS.gene36979:CDS
AGTTTAGGAAATTGGACCAA+TGG 0.540876 8.4:+77391448 MS.gene36979:CDS
CAATTCTGGAGCAACAATCT+GGG 0.541138 8.4:+77390898 MS.gene36979:CDS
TTCATTGGAGAACTGGTCCA+TGG 0.543558 8.4:+77391104 MS.gene36979:CDS
CAATGGTTGTGTGAGGAAAG+AGG 0.545464 8.4:+77391465 MS.gene36979:CDS
TCAAATCTAGTGAAACAAGA+TGG 0.545906 8.4:+77391523 MS.gene36979:CDS
TGTACCAAATTCCTAAGTAT+CGG 0.548456 8.4:-77390670 None:intergenic
GAATTATCACAGTTACCAAA+TGG 0.550285 8.4:-77391367 None:intergenic
TAACCAAGTATTTACACGGT+TGG 0.554094 8.4:+77391161 MS.gene36979:CDS
AATGGTTGTGTGAGGAAAGA+GGG 0.555090 8.4:+77391466 MS.gene36979:CDS
CCAAATTCCTAAGTATCGGT+TGG 0.560800 8.4:-77390666 None:intergenic
CTGATACCAAGTTCTGCGCC+CGG 0.567858 8.4:-77391751 None:intergenic
AACAACACAAACTTCAAGCT+AGG 0.567877 8.4:+77390620 MS.gene36979:CDS
AAGTGTGAGATGGTGAAGAA+TGG 0.575364 8.4:+77391499 MS.gene36979:CDS
AACTGGTCCATGGAATGGAC+TGG 0.579171 8.4:+77391114 MS.gene36979:CDS
ATTCCATTTGAATCTTTGAG+TGG 0.579628 8.4:-77390734 None:intergenic
AAATACTTGGTTAACATACT+CGG 0.597803 8.4:-77391151 None:intergenic
CAGCTAAACTTGATGATGCA+GGG 0.612628 8.4:+77390855 MS.gene36979:CDS
ATGTTAACCAAGTATTTACA+CGG 0.622594 8.4:+77391157 MS.gene36979:CDS
ATTCTCTCATTGACACCACA+TGG 0.625704 8.4:+77391253 MS.gene36979:CDS
GTTTGAGCCAAAGAATTCTG+TGG 0.637127 8.4:+77391420 MS.gene36979:CDS
TTGGAACAGCTGCATCTGCA+GGG 0.666649 8.4:-77390934 None:intergenic
ATTGAACTTGAAGTGTGAGA+TGG 0.683815 8.4:+77391489 MS.gene36979:CDS
ACTGCTGATATAGATATGTG+TGG 0.694020 8.4:+77391595 MS.gene36979:CDS
ATTGGACCAATGGTTGTGTG+AGG 0.729499 8.4:+77391458 MS.gene36979:CDS
ACCAACTTAAGTGTTCCATG+TGG 0.765404 8.4:-77391268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATACATACAAAATATAGA+AGG - chr8.4:77391667-77391686 None:intergenic 20.0%
!!! CTTCTATATTTTGTATGTAT+TGG + chr8.4:77391665-77391684 MS.gene36979:CDS 20.0%
! AAATACTTGGTTAACATACT+CGG - chr8.4:77391154-77391173 None:intergenic 25.0%
! AATAAAATGTGCAACATATG+AGG - chr8.4:77390529-77390548 None:intergenic 25.0%
! ATGTTAACCAAGTATTTACA+CGG + chr8.4:77391157-77391176 MS.gene36979:CDS 25.0%
! GGTATGATAAGAAAATTCAT+TGG + chr8.4:77391089-77391108 MS.gene36979:CDS 25.0%
! GGTTGAGTATATGAATAAAA+AGG + chr8.4:77391288-77391307 MS.gene36979:CDS 25.0%
! GTAATATTGAACAAACCAAA+TGG + chr8.4:77390785-77390804 MS.gene36979:CDS 25.0%
!! ATATTTTCTTACCTGTTACT+TGG - chr8.4:77390979-77390998 None:intergenic 25.0%
!! CAAAATGAGTGTGATTTTTA+TGG + chr8.4:77391334-77391353 MS.gene36979:CDS 25.0%
!! TGTGATTTTTATGGAAAATG+CGG + chr8.4:77391343-77391362 MS.gene36979:CDS 25.0%
!!! AATTCCAAACATAGTTTTGT+CGG - chr8.4:77391236-77391255 None:intergenic 25.0%
!!! CAATTTGTAGTTGTTTTGAT+GGG + chr8.4:77391398-77391417 MS.gene36979:CDS 25.0%
!!! TTCACTTTTTCTTGATACAA+AGG - chr8.4:77391002-77391021 None:intergenic 25.0%
AAAGGAACTTCTTAGATTTG+AGG + chr8.4:77391306-77391325 MS.gene36979:CDS 30.0%
AAGAAAATTCATTGGAGAAC+TGG + chr8.4:77391097-77391116 MS.gene36979:CDS 30.0%
ATTCCATTTGAATCTTTGAG+TGG - chr8.4:77390737-77390756 None:intergenic 30.0%
ATTGTCACAATTCACAAAGA+TGG + chr8.4:77390755-77390774 MS.gene36979:CDS 30.0%
CAAATGGTATCATCATCATT+TGG + chr8.4:77390801-77390820 MS.gene36979:CDS 30.0%
CCATCAAAACAACTACAAAT+TGG - chr8.4:77391400-77391419 None:intergenic 30.0%
GAATTATCACAGTTACCAAA+TGG - chr8.4:77391370-77391389 None:intergenic 30.0%
GATTTGCAGAAATTTCCTTA+TGG + chr8.4:77391703-77391722 MS.gene36979:CDS 30.0%
TCAAATCTAGTGAAACAAGA+TGG + chr8.4:77391523-77391542 MS.gene36979:CDS 30.0%
TCATACCAAATGAAAACTTC+TGG - chr8.4:77391076-77391095 None:intergenic 30.0%
TGTACCAAATTCCTAAGTAT+CGG - chr8.4:77390673-77390692 None:intergenic 30.0%
TTTGGCAAATTGTTCTTGTT+TGG + chr8.4:77391627-77391646 MS.gene36979:CDS 30.0%
! AGTGAAACAAGATGGATTTA+AGG + chr8.4:77391531-77391550 MS.gene36979:CDS 30.0%
! ATCGGTTGGTTGAATTTAAT+GGG - chr8.4:77390655-77390674 None:intergenic 30.0%
! ATTCTAAGAGACATCAATTC+TGG + chr8.4:77390884-77390903 MS.gene36979:CDS 30.0%
! CAAATGATGATGATACCATT+TGG - chr8.4:77390803-77390822 None:intergenic 30.0%
! GTGATTTTTATGGAAAATGC+GGG + chr8.4:77391344-77391363 MS.gene36979:CDS 30.0%
! TATCGGTTGGTTGAATTTAA+TGG - chr8.4:77390656-77390675 None:intergenic 30.0%
!!! CCAATTTGTAGTTGTTTTGA+TGG + chr8.4:77391397-77391416 MS.gene36979:CDS 30.0%
!!! GAGTGATTTTGATGATGTAA+TGG - chr8.4:77390576-77390595 None:intergenic 30.0%
AACAACACAAACTTCAAGCT+AGG + chr8.4:77390620-77390639 MS.gene36979:CDS 35.0%
AATTCAACCAACCGATACTT+AGG + chr8.4:77390659-77390678 MS.gene36979:CDS 35.0%
AATTCTGTGGAATGGAGTTT+AGG + chr8.4:77391433-77391452 MS.gene36979:CDS 35.0%
ACTGCTGATATAGATATGTG+TGG + chr8.4:77391595-77391614 MS.gene36979:CDS 35.0%
AGTGAAAATGATCCTTCTTC+AGG + chr8.4:77391016-77391035 MS.gene36979:CDS 35.0%
AGTTTAGGAAATTGGACCAA+TGG + chr8.4:77391448-77391467 MS.gene36979:CDS 35.0%
ATTGAACTTGAAGTGTGAGA+TGG + chr8.4:77391489-77391508 MS.gene36979:CDS 35.0%
CAACCACTCAAAGATTCAAA+TGG + chr8.4:77390731-77390750 MS.gene36979:CDS 35.0%
GTTTGCAATCCATATGTTGT+TGG - chr8.4:77390705-77390724 None:intergenic 35.0%
TAACCAAGTATTTACACGGT+TGG + chr8.4:77391161-77391180 MS.gene36979:CDS 35.0%
TATGTGTGGAGAAGATTGTT+TGG + chr8.4:77391609-77391628 MS.gene36979:CDS 35.0%
TCAATGAGACCAACAACATA+TGG + chr8.4:77390693-77390712 MS.gene36979:CDS 35.0%
TGGAATGGAGTTTAGGAAAT+TGG + chr8.4:77391440-77391459 MS.gene36979:CDS 35.0%
TTAGCTGCAATTCTCATTGT+TGG - chr8.4:77390956-77390975 None:intergenic 35.0%
TTGCAGAAATTTCCTTATGG+TGG + chr8.4:77391706-77391725 MS.gene36979:CDS 35.0%
! ATGCACCAGAAGTTTTCATT+TGG + chr8.4:77391068-77391087 MS.gene36979:CDS 35.0%
! TGATGATGTAATGGCGTTAT+TGG - chr8.4:77390567-77390586 None:intergenic 35.0%
! TGTTTGAGGTTATTGTCTCT+TGG - chr8.4:77390604-77390623 None:intergenic 35.0%
!! CGTTTTGATCAAGACAATGA+TGG + chr8.4:77391184-77391203 MS.gene36979:CDS 35.0%
!! CTTGAAGTTTGTGTTGTTTG+AGG - chr8.4:77390618-77390637 None:intergenic 35.0%
!! TTCAGCTAGTCTTGAAAGAT+TGG + chr8.4:77391045-77391064 MS.gene36979:CDS 35.0%
AAGAGATCAACTCCACCATA+AGG - chr8.4:77391721-77391740 None:intergenic 40.0%
AAGTGTGAGATGGTGAAGAA+TGG + chr8.4:77391499-77391518 MS.gene36979:CDS 40.0%
AATGGTTGTGTGAGGAAAGA+GGG + chr8.4:77391466-77391485 MS.gene36979:CDS 40.0%
ACCAACTTAAGTGTTCCATG+TGG - chr8.4:77391271-77391290 None:intergenic 40.0%
ACCACATGGAACACTTAAGT+TGG + chr8.4:77391267-77391286 MS.gene36979:CDS 40.0%
AGAAAAACCAGTCCATTCCA+TGG - chr8.4:77391124-77391143 None:intergenic 40.0%
AGCCAAAGAATTCTGTGGAA+TGG + chr8.4:77391425-77391444 MS.gene36979:CDS 40.0%
ATTCTCTCATTGACACCACA+TGG + chr8.4:77391253-77391272 MS.gene36979:CDS 40.0%
ATTGCAGCTAACCAAGTAAC+AGG + chr8.4:77390965-77390984 MS.gene36979:CDS 40.0%
CCAACCGATACTTAGGAATT+TGG + chr8.4:77390666-77390685 MS.gene36979:CDS 40.0%
CTCCATTCCACAGAATTCTT+TGG - chr8.4:77391430-77391449 None:intergenic 40.0%
GCTGAATAATGTCCTGAAGA+AGG - chr8.4:77391031-77391050 None:intergenic 40.0%
GTTGATCTCTCAGCAAAATC+AGG - chr8.4:77391577-77391596 None:intergenic 40.0%
GTTTGAGCCAAAGAATTCTG+TGG + chr8.4:77391420-77391439 MS.gene36979:CDS 40.0%
TTCGCCGACAAAACTATGTT+TGG + chr8.4:77391229-77391248 MS.gene36979:CDS 40.0%
!! ACAGCTAAACTTGATGATGC+AGG + chr8.4:77390854-77390873 MS.gene36979:CDS 40.0%
!! CAATTCTGGAGCAACAATCT+GGG + chr8.4:77390898-77390917 MS.gene36979:CDS 40.0%
!! CAGCTAAACTTGATGATGCA+GGG + chr8.4:77390855-77390874 MS.gene36979:CDS 40.0%
!! CCAAATTCCTAAGTATCGGT+TGG - chr8.4:77390669-77390688 None:intergenic 40.0%
!! TCAATTCTGGAGCAACAATC+TGG + chr8.4:77390897-77390916 MS.gene36979:CDS 40.0%
!!! TGGAATGGACTGGTTTTTCT+CGG + chr8.4:77391124-77391143 MS.gene36979:CDS 40.0%
ACGCCAACCGTGTAAATACT+TGG - chr8.4:77391167-77391186 None:intergenic 45.0%
ATTGGACCAATGGTTGTGTG+AGG + chr8.4:77391458-77391477 MS.gene36979:CDS 45.0%
CAATGGTTGTGTGAGGAAAG+AGG + chr8.4:77391465-77391484 MS.gene36979:CDS 45.0%
CTCTTTCCTCACACAACCAT+TGG - chr8.4:77391467-77391486 None:intergenic 45.0%
TATGGAAAATGCGGGCCATT+TGG + chr8.4:77391352-77391371 MS.gene36979:CDS 45.0%
TGATCTCTTCATTCGAGTGC+CGG + chr8.4:77391732-77391751 MS.gene36979:CDS 45.0%
TTCATTGGAGAACTGGTCCA+TGG + chr8.4:77391104-77391123 MS.gene36979:CDS 45.0%
AACTGGTCCATGGAATGGAC+TGG + chr8.4:77391114-77391133 MS.gene36979:CDS 50.0%
GATCTCTTCATTCGAGTGCC+GGG + chr8.4:77391733-77391752 MS.gene36979:CDS 50.0%
TGGAGAACTGGTCCATGGAA+TGG + chr8.4:77391109-77391128 MS.gene36979:CDS 50.0%
TTGGAACAGCTGCATCTGCA+GGG - chr8.4:77390937-77390956 None:intergenic 50.0%
CTGATACCAAGTTCTGCGCC+CGG - chr8.4:77391754-77391773 None:intergenic 55.0%
GTTGGAACAGCTGCATCTGC+AGG - chr8.4:77390938-77390957 None:intergenic 55.0%
!! CGAGTGCCGGGCGCAGAACT+TGG + chr8.4:77391745-77391764 MS.gene36979:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 77390482 77391792 77390482 ID=MS.gene36979
chr8.4 mRNA 77390482 77391792 77390482 ID=MS.gene36979.t1;Parent=MS.gene36979
chr8.4 exon 77390482 77391792 77390482 ID=MS.gene36979.t1.exon1;Parent=MS.gene36979.t1
chr8.4 CDS 77390482 77391792 77390482 ID=cds.MS.gene36979.t1;Parent=MS.gene36979.t1
Gene Sequence

>MS.gene36979

ATGGCTTTTCTAAGTCATAATACAAATGACTTATTCATTACATTCCTCATATGTTGCACATTTTATTCATGCTATAGTTCTACCAATAACGCCATTACATCATCAAAATCACTCAAAGACCAAGAGACAATAACCTCAAACAACACAAACTTCAAGCTAGGATTTTTCAGCCCATTAAATTCAACCAACCGATACTTAGGAATTTGGTACATCAATGAGACCAACAACATATGGATTGCAAACAGAGATCAACCACTCAAAGATTCAAATGGAATTGTCACAATTCACAAAGATGGAAATCTTGTAATATTGAACAAACCAAATGGTATCATCATCATTTGGTCAACAAACATTTCAACTTCAACAAATTCAACAGCTAAACTTGATGATGCAGGGAACTTGATTCTAAGAGACATCAATTCTGGAGCAACAATCTGGGATAGTTTCACACACCCTGCAGATGCAGCTGTTCCAACAATGAGAATTGCAGCTAACCAAGTAACAGGTAAGAAAATATCCTTTGTATCAAGAAAAAGTGAAAATGATCCTTCTTCAGGACATTATTCAGCTAGTCTTGAAAGATTGGATGCACCAGAAGTTTTCATTTGGTATGATAAGAAAATTCATTGGAGAACTGGTCCATGGAATGGACTGGTTTTTCTCGGAACACCGAGTATGTTAACCAAGTATTTACACGGTTGGCGTTTTGATCAAGACAATGATGGAACTACTTTTATTACTTACAATTTCGCCGACAAAACTATGTTTGGAATTCTCTCATTGACACCACATGGAACACTTAAGTTGGTTGAGTATATGAATAAAAAGGAACTTCTTAGATTTGAGGTTGATCAAAATGAGTGTGATTTTTATGGAAAATGCGGGCCATTTGGTAACTGTGATAATTCTATTGTGCCAATTTGTAGTTGTTTTGATGGGTTTGAGCCAAAGAATTCTGTGGAATGGAGTTTAGGAAATTGGACCAATGGTTGTGTGAGGAAAGAGGGATTGAACTTGAAGTGTGAGATGGTGAAGAATGGATCAAATCTAGTGAAACAAGATGGATTTAAGGTGTATCATAATATGAAAGTTCCTGATTTTGCTGAGAGATCAACTGCTGATATAGATATGTGTGGAGAAGATTGTTTGGCAAATTGTTCTTGTTTGGCATATGCATATGATCCTTCTATATTTTGTATGTATTGGACTGTAGAGTTAATTGATTTGCAGAAATTTCCTTATGGTGGAGTTGATCTCTTCATTCGAGTGCCGGGCGCAGAACTTGGTATCAGCTTTTCTCTCTTCTTTTAA
Protein sequence

>MS.gene36979.t1

MAFLSHNTNDLFITFLICCTFYSCYSSTNNAITSSKSLKDQETITSNNTNFKLGFFSPLNSTNRYLGIWYINETNNIWIANRDQPLKDSNGIVTIHKDGNLVILNKPNGIIIIWSTNISTSTNSTAKLDDAGNLILRDINSGATIWDSFTHPADAAVPTMRIAANQVTGKKISFVSRKSENDPSSGHYSASLERLDAPEVFIWYDKKIHWRTGPWNGLVFLGTPSMLTKYLHGWRFDQDNDGTTFITYNFADKTMFGILSLTPHGTLKLVEYMNKKELLRFEVDQNECDFYGKCGPFGNCDNSIVPICSCFDGFEPKNSVEWSLGNWTNGCVRKEGLNLKCEMVKNGSNLVKQDGFKVYHNMKVPDFAERSTADIDMCGEDCLANCSCLAYAYDPSIFCMYWTVELIDLQKFPYGGVDLFIRVPGAELGISFSLFF