AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060852


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060852.t1 MTR_1g097850 94.220 346 6 1 1 346 19 350 0.0 680
MS.gene060852.t1 MTR_6g039820 79.321 324 67 0 1 324 19 342 0.0 560
MS.gene060852.t1 MTR_3g013430 68.000 325 103 1 2 326 131 454 8.32e-175 495
MS.gene060852.t1 MTR_1g097850 92.653 245 4 1 1 245 19 249 2.36e-170 474
MS.gene060852.t1 MTR_8g041330 64.087 323 115 1 2 324 40 361 1.53e-161 458
MS.gene060852.t1 MTR_6g040230 77.021 235 52 1 90 324 263 495 4.93e-132 386
MS.gene060852.t1 MTR_2g054370 33.333 324 193 6 9 324 57 365 1.32e-49 170
MS.gene060852.t1 MTR_8g041220 63.441 93 33 1 220 312 40 131 1.09e-39 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060852.t1 AT1G74320 66.258 326 109 1 2 327 23 347 6.27e-169 474
MS.gene060852.t1 AT4G09760 65.123 324 111 2 2 324 19 341 2.77e-165 465
MS.gene060852.t1 AT4G09760 65.123 324 111 2 2 324 19 341 2.77e-165 465
MS.gene060852.t1 AT1G71697 64.308 325 115 1 3 326 22 346 3.89e-163 459
MS.gene060852.t1 AT4G09760 61.650 206 77 2 2 206 19 223 2.06e-92 276
MS.gene060852.t1 AT4G09760 60.733 191 73 2 2 191 19 208 1.22e-83 253
MS.gene060852.t1 AT2G26830 33.123 317 186 7 17 321 58 360 7.89e-52 176

Find 0 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTCAATAGAAAATA+AGG + 10696:9802-9821 MS.gene060852:intron 10.0%
!! TAATAGAACTAAATAATTTA+TGG + 10696:10710-10729 MS.gene060852:intron 10.0%
!!! ATTGGATTTTTTTATTAAAA+TGG - 10696:9227-9246 MS.gene060852:intergenic 10.0%
!!! CATAATTTTTTTAAATCAAA+TGG - 10696:11134-11153 MS.gene060852:intergenic 10.0%
!!! TATTTACATTTTTAAGTTTA+AGG + 10696:10915-10934 MS.gene060852:intron 10.0%
!!! TCTTTAAAAAAGAAATTTAA+TGG + 10696:10439-10458 MS.gene060852:intron 10.0%
!!! TTAAATTTCTTTTTTAAAGA+TGG - 10696:10439-10458 MS.gene060852:intergenic 10.0%
!! AAAAAAGAAATTTAATGGAA+CGG + 10696:10444-10463 MS.gene060852:intron 15.0%
!! ACAAAACAGTAAAATATAAT+TGG - 10696:9630-9649 MS.gene060852:intergenic 15.0%
!! ATATTATCTTGCAAAATAAA+GGG + 10696:10209-10228 MS.gene060852:intron 15.0%
!! CTTCTTAACTTATAAAATTA+AGG - 10696:9366-9385 MS.gene060852:intergenic 15.0%
!!! ATTTTATAAGTTAAGAAGTT+TGG + 10696:9368-9387 MS.gene060852:intron 15.0%
!!! TAAGAAGTATATTTGATATT+CGG - 10696:11821-11840 MS.gene060852:intergenic 15.0%
!!! TTCAATTGATTTTAATTCTT+TGG - 10696:10852-10871 MS.gene060852:intergenic 15.0%
!! AAGATAAAGGGAATAAATTA+AGG - 10696:10349-10368 MS.gene060852:intergenic 20.0%
!! AATTTATGTGTCTGTAAAAA+AGG - 10696:10750-10769 MS.gene060852:intergenic 20.0%
!! ACTAAACTAAACTAACTTAT+AGG - 10696:9835-9854 MS.gene060852:intergenic 20.0%
!! AGAATAAATAACATGAAGAA+AGG - 10696:10537-10556 MS.gene060852:intergenic 20.0%
!! AGATAAAGGGAATAAATTAA+GGG - 10696:10348-10367 MS.gene060852:intergenic 20.0%
!! AGATGATGAAATAAATATTC+TGG + 10696:11260-11279 MS.gene060852:CDS 20.0%
!! ATTTATCTGAAAAACTTCAT+TGG - 10696:8826-8845 MS.gene060852:intergenic 20.0%
!! CATATTATCTTGCAAAATAA+AGG + 10696:10208-10227 MS.gene060852:intron 20.0%
!! CTAAATAATTTATGGAACTA+AGG + 10696:10718-10737 MS.gene060852:intron 20.0%
!! GCATGTTTCTTTATTATTAT+TGG - 10696:10561-10580 MS.gene060852:intergenic 20.0%
!! TAAATGTTCATTAGTAAACT+TGG + 10696:10687-10706 MS.gene060852:intron 20.0%
!! TATATAAAGTAGATCAAGAT+CGG - 10696:10172-10191 MS.gene060852:intergenic 20.0%
!! TATTCAATAGAAAATAAGGT+AGG + 10696:9806-9825 MS.gene060852:intron 20.0%
!!! AAAATCAATTTTGTTGCAAT+TGG + 10696:9551-9570 MS.gene060852:intron 20.0%
!!! AATTTATTCCCTTTATCTTT+TGG + 10696:10350-10369 MS.gene060852:intron 20.0%
!!! ATGAAGTTTTTCAGATAAAT+TGG + 10696:8826-8845 MS.gene060852:CDS 20.0%
!!! CAGAAATATTTCTATCATAT+TGG - 10696:9245-9264 MS.gene060852:intergenic 20.0%
!!! CTATTCTTCAATTTTGAATT+AGG - 10696:9394-9413 MS.gene060852:intergenic 20.0%
!!! TAATTTGTAGAACTAAAAAG+TGG + 10696:9172-9191 MS.gene060852:intron 20.0%
!!! TATAAGTAACTATCATGTTT+TGG - 10696:11423-11442 MS.gene060852:intergenic 20.0%
!!! TATTTTCTAAATTTACTTGC+AGG - 10696:9760-9779 MS.gene060852:intergenic 20.0%
!!! TGTTGAAATTTTCTTCAATA+GGG + 10696:8905-8924 MS.gene060852:CDS 20.0%
! ACAATATGGTAACATTATGA+TGG + 10696:11335-11354 MS.gene060852:CDS 25.0%
! ATAACATGAAGAAAGGAATA+TGG - 10696:10530-10549 MS.gene060852:intergenic 25.0%
! CAAAGGAAACAAAAAAATTC+GGG + 10696:11226-11245 MS.gene060852:CDS 25.0%
! CCAAAGGAAACAAAAAAATT+CGG + 10696:11225-11244 MS.gene060852:CDS 25.0%
! CTAAGAACAAAAAATTTACC+AGG - 10696:11595-11614 MS.gene060852:intergenic 25.0%
! GCAAGATAATATGTTATGAT+GGG - 10696:10201-10220 MS.gene060852:intergenic 25.0%
! TAACATGAAGAAAGGAATAT+GGG - 10696:10529-10548 MS.gene060852:intergenic 25.0%
! TATGTATGCATAGAATGATA+AGG + 10696:10631-10650 MS.gene060852:intron 25.0%
! TCATAATGTTACCATATTGT+AGG - 10696:11335-11354 MS.gene060852:intergenic 25.0%
! TGATCTCAAAAGCTAAAATA+TGG - 10696:10253-10272 MS.gene060852:intergenic 25.0%
! TGCAAGATAATATGTTATGA+TGG - 10696:10202-10221 MS.gene060852:intergenic 25.0%
! TTGAAGTTTATCATGTACTT+TGG + 10696:9105-9124 MS.gene060852:intron 25.0%
! TTGAATAGAACAAACCAAAT+AGG - 10696:9595-9614 MS.gene060852:intergenic 25.0%
! TTGACATATAAGAACCTATT+TGG + 10696:9578-9597 MS.gene060852:intron 25.0%
! TTGATTACAAAGAATATGCA+AGG + 10696:12094-12113 MS.gene060852:CDS 25.0%
!! GTGTTGAAATTTTCTTCAAT+AGG + 10696:8904-8923 MS.gene060852:CDS 25.0%
!! TGAAATAAATATTCTGGAGA+AGG + 10696:11266-11285 MS.gene060852:CDS 25.0%
!!! AAATCACCATCATTTTTTGT+TGG - 10696:8852-8871 MS.gene060852:intergenic 25.0%
!!! CGAATTTTTTTGTTTCCTTT+GGG - 10696:11227-11246 MS.gene060852:intergenic 25.0%
!!! GAATTTTTTTGTTTCCTTTG+GGG - 10696:11226-11245 MS.gene060852:intergenic 25.0%
!!! TTTTTTGCATCATGAAACTA+TGG + 10696:9448-9467 MS.gene060852:intron 25.0%
AAGATGATATTTCAGAGTCA+CGG - 10696:11003-11022 MS.gene060851:intergenic 30.0%
AATTGGCCAACAAAAAATGA+TGG + 10696:8843-8862 MS.gene060852:CDS 30.0%
ACAAAAAGGAACACATTAAC+AGG - 10696:10803-10822 MS.gene060852:intergenic 30.0%
AGGGAATAAATTAAGGGAAA+AGG - 10696:10342-10361 MS.gene060852:intergenic 30.0%
CAAATTCATCATCCTTGTAT+TGG - 10696:10884-10903 MS.gene060852:intergenic 30.0%
CTGGGTAGGTAATATAATTA+GGG + 10696:9281-9300 MS.gene060852:intron 30.0%
GAAAAATTTCTTGCAGTGAA+TGG + 10696:10117-10136 MS.gene060852:intron 30.0%
TAAGGTGAATCAGTTAATGA+CGG + 10696:11897-11916 MS.gene060852:CDS 30.0%
TACAAATTAGTATGTCAGCA+AGG - 10696:11682-11701 MS.gene060852:intergenic 30.0%
TCACACTAATTGTAAGCTAA+TGG + 10696:11376-11395 MS.gene060852:intron 30.0%
TTTGTCTTTCCAATCAGAAT+CGG + 10696:10054-10073 MS.gene060852:intron 30.0%
! AGACAAGTTCTTTTATTGGT+AGG + 10696:9869-9888 MS.gene060852:intron 30.0%
! CAAAAAATGATGGTGATTTG+AGG + 10696:8853-8872 MS.gene060852:CDS 30.0%
! GAAAGAGTTTTACCAATACA+AGG + 10696:10869-10888 MS.gene060852:intron 30.0%
! GTCAAGACAAGTTCTTTTAT+TGG + 10696:9865-9884 MS.gene060852:intron 30.0%
! TGTTTTCCATGTGTTTTACT+AGG + 10696:11169-11188 MS.gene060852:intron 30.0%
!! TGACTCTGAAATATCATCTT+TGG + 10696:11003-11022 MS.gene060852:CDS 30.0%
!! TTTGATTGCTTTGAGAAGAT+AGG + 10696:9485-9504 MS.gene060852:intron 30.0%
!!! CCGAATTTTTTTGTTTCCTT+TGG - 10696:11228-11247 MS.gene060852:intergenic 30.0%
!!! GTAACTATCATGTTTTGGAA+AGG - 10696:11418-11437 MS.gene060852:intergenic 30.0%
!!! TGCAGCAAATTATTTTTGCT+GGG + 10696:9263-9282 MS.gene060852:intron 30.0%
AGAAAGGAATATGGGAAGAA+AGG - 10696:10521-10540 MS.gene060852:intergenic 35.0%
AGAACACACAATACTCATTG+TGG - 10696:11628-11647 MS.gene060852:intergenic 35.0%
CAGTTAACAAACTAGTATGC+TGG - 10696:10773-10792 MS.gene060852:intergenic 35.0%
CCATTGCTCCAAAAGATAAA+GGG - 10696:10361-10380 MS.gene060852:intergenic 35.0%
CGACAGAGTGAAATTCATAA+TGG - 10696:11772-11791 MS.gene060852:intergenic 35.0%
CTTGACTACAGTAAATATCC+TGG + 10696:11574-11593 MS.gene060852:CDS 35.0%
GACATCAACAACAGACAAAA+AGG - 10696:10817-10836 MS.gene060852:intergenic 35.0%
GATAAGAGAATCACATACTC+TGG - 10696:9030-9049 MS.gene060852:intergenic 35.0%
GCTGGGTAGGTAATATAATT+AGG + 10696:9280-9299 MS.gene060852:intron 35.0%
GGCAAATCATTTCTGTGAAA+TGG + 10696:11519-11538 MS.gene060852:CDS 35.0%
GTACAAAGAAGGCTCATATT+TGG + 10696:11068-11087 MS.gene060852:CDS 35.0%
GTTAAGGAAGCCTACTTTAT+TGG + 10696:12137-12156 MS.gene060852:CDS 35.0%
GTTAATGAGAACACCTATTC+AGG - 10696:10093-10112 MS.gene060852:intergenic 35.0%
TAAAGTAGATCAAGATCGGA+CGG - 10696:10168-10187 MS.gene060852:intergenic 35.0%
TACAATCACTCTTTGTACAC+AGG + 10696:11856-11875 MS.gene060852:intron 35.0%
TACCATATTGTAGGTCATTG+TGG - 10696:11326-11345 MS.gene060852:intergenic 35.0%
TACTCCAAAACAACCAAAAG+AGG - 10696:10398-10417 MS.gene060852:intergenic 35.0%
TCCATTGCTCCAAAAGATAA+AGG - 10696:10362-10381 MS.gene060852:intergenic 35.0%
TCTCGCAAACCATATATTCT+GGG + 10696:11936-11955 MS.gene060852:CDS 35.0%
TGTGAAGGATATCAAGAGAT+TGG + 10696:11294-11313 MS.gene060852:CDS 35.0%
TTACTGTAGTCAAGAACATG+AGG - 10696:11568-11587 MS.gene060852:intergenic 35.0%
TTGCAAGTGATTCCATTGAA+AGG + 10696:8792-8811 MS.gene060852:CDS 35.0%
TTTGAGTGTATCTCAAAGCA+TGG + 10696:8945-8964 MS.gene060852:CDS 35.0%
! AAATGATGGTGATTTGAGGA+AGG + 10696:8857-8876 MS.gene060852:CDS 35.0%
! CATGTGTTTTACTAGGAACT+GGG + 10696:11176-11195 MS.gene060852:intron 35.0%
! GAATCCAATTTCCTCTAAGA+GGG - 10696:9906-9925 MS.gene060852:intergenic 35.0%
! GTTGATGAGTCCAATAAAGT+AGG - 10696:12150-12169 MS.gene060852:intergenic 35.0%
! TTTCACAGAAATGATTTGCC+AGG - 10696:11519-11538 MS.gene060852:intergenic 35.0%
!! AAGGTTCTGGTTCGTTTATA+TGG + 10696:8876-8895 MS.gene060852:CDS 35.0%
!! CTCTGAAATATCATCTTTGG+TGG + 10696:11006-11025 MS.gene060852:CDS 35.0%
!! TTTGCCTCTTTTGGTTGTTT+TGG + 10696:10391-10410 MS.gene060852:intron 35.0%
!!! CTGCAGCAAATTATTTTTGC+TGG + 10696:9262-9281 MS.gene060852:intron 35.0%
!!! GCAAATTATTTTTGCTGGGT+AGG + 10696:9267-9286 MS.gene060852:intron 35.0%
!!! TTATCTTTTGGAGCAATGGA+GGG + 10696:10362-10381 MS.gene060852:intron 35.0%
!!! TTTATCTTTTGGAGCAATGG+AGG + 10696:10361-10380 MS.gene060852:intron 35.0%
AACTGTTCACAGTTTCGGTT+TGG - 10696:12182-12201 MS.gene060851:intergenic 40.0%
AAGTCATCGATGTCCTGAAT+AGG + 10696:10077-10096 MS.gene060852:intron 40.0%
ACAAAGAATATGCAAGGCAG+AGG + 10696:12100-12119 MS.gene060852:CDS 40.0%
ACTGTTCACAGTTTCGGTTT+GGG - 10696:12181-12200 MS.gene060852:intergenic 40.0%
AGGAATATGGGAAGAAAGGA+TGG - 10696:10517-10536 MS.gene060852:intergenic 40.0%
AGTGAATGGAAACACGCATT+CGG + 10696:10131-10150 MS.gene060852:intron 40.0%
ATATGAGCCTTCTTTGTACC+AGG - 10696:11067-11086 MS.gene060852:intergenic 40.0%
ATATGATGAACCAGAACTCG+AGG + 10696:11701-11720 MS.gene060852:intron 40.0%
CAAGAAACCAAGCAATGCTA+AGG + 10696:11879-11898 MS.gene060852:CDS 40.0%
CCAGTTCCTAGTAAAACACA+TGG - 10696:11178-11197 MS.gene060852:intergenic 40.0%
CTCATATTTGGCAGAGAATG+AGG + 10696:11080-11099 MS.gene060852:CDS 40.0%
CTCGCAAACCATATATTCTG+GGG + 10696:11937-11956 MS.gene060852:CDS 40.0%
CTCTCGCAAACCATATATTC+TGG + 10696:11935-11954 MS.gene060852:CDS 40.0%
GAACATGAGGTGTATCACTA+TGG - 10696:11555-11574 MS.gene060852:intergenic 40.0%
GAATGGAATCATGTGCTCTT+AGG + 10696:10480-10499 MS.gene060852:intron 40.0%
GGAAACAAAAAAATTCGGGC+TGG + 10696:11230-11249 MS.gene060852:CDS 40.0%
GGAATCCAATTTCCTCTAAG+AGG - 10696:9907-9926 MS.gene060852:intergenic 40.0%
TAAGCCCTCTTAGAGGAAAT+TGG + 10696:9899-9918 MS.gene060852:intron 40.0%
TACCAGGCATATGAAGCTTA+TGG - 10696:11051-11070 MS.gene060852:intergenic 40.0%
TCATATGCCTGGTACAAAGA+AGG + 10696:11057-11076 MS.gene060852:CDS 40.0%
TGAATGTGTGTATCTCTGCA+GGG - 10696:9951-9970 MS.gene060852:intergenic 40.0%
TGATTCACCTTAGCATTGCT+TGG - 10696:11889-11908 MS.gene060852:intergenic 40.0%
TGCCACAATGACCTACAATA+TGG + 10696:11321-11340 MS.gene060852:CDS 40.0%
TGTATCTCAAAGCATGGACA+AGG + 10696:8951-8970 MS.gene060852:CDS 40.0%
TTACCTATAAGCCCTCTTAG+AGG + 10696:9892-9911 MS.gene060852:intron 40.0%
TTCCATAAGCTTCATATGCC+TGG + 10696:11046-11065 MS.gene060852:CDS 40.0%
TTGAATGTGTGTATCTCTGC+AGG - 10696:9952-9971 MS.gene060852:intergenic 40.0%
TTGGTCATTGCACCTTTCAA+TGG - 10696:8807-8826 MS.gene060852:intergenic 40.0%
TTTCACTACTGGTAGAGTTG+AGG + 10696:8992-9011 MS.gene060852:CDS 40.0%
! ACGGTATTGAGTCAATGGAA+TGG + 10696:10463-10482 MS.gene060852:intron 40.0%
! ATGGAACGGTATTGAGTCAA+TGG + 10696:10458-10477 MS.gene060852:intron 40.0%
! CAAAGTGTTCACATCATCGA+TGG - 10696:8775-8794 MS.gene060852:intergenic 40.0%
! CCATGTGTTTTACTAGGAAC+TGG + 10696:11175-11194 MS.gene060852:intron 40.0%
! TGTTTTACTAGGAACTGGGT+TGG + 10696:11180-11199 MS.gene060852:intron 40.0%
! TTTCCTCTAAGAGGGCTTAT+AGG - 10696:9898-9917 MS.gene060852:intergenic 40.0%
!! ACCATATATTCTGGGGCTTA+TGG + 10696:11944-11963 MS.gene060852:CDS 40.0%
!! CATATATTCTGGGGCTTATG+GGG + 10696:11946-11965 MS.gene060852:CDS 40.0%
!! CCATATATTCTGGGGCTTAT+GGG + 10696:11945-11964 MS.gene060852:CDS 40.0%
!! GGTTTCAGCAGTATTGGTTA+AGG + 10696:12121-12140 MS.gene060852:CDS 40.0%
!!! CCCTTTATCTTTTGGAGCAA+TGG + 10696:10358-10377 MS.gene060852:intron 40.0%
!!! CTCGCTTCTTCTCTTGTTTT+TGG + 10696:10949-10968 MS.gene060852:intron 40.0%
AATTGGATTCCCGCAAGTCA+AGG + 10696:9916-9935 MS.gene060852:intron 45.0%
ACACACATTCAAGACATCCG+TGG + 10696:9960-9979 MS.gene060852:intron 45.0%
CAAAAGTTTGTGCTCCCCAA+AGG + 10696:11209-11228 MS.gene060852:CDS 45.0%
CAATCCTATTGCGTATGACC+TGG + 10696:11498-11517 MS.gene060852:CDS 45.0%
CAGCGAACTGTTCACAGTTT+CGG - 10696:12187-12206 MS.gene060852:intergenic 45.0%
CAGTAGTGAAACGAGCAAGA+AGG - 10696:8983-9002 MS.gene060852:intergenic 45.0%
CCCATAAGCCCCAGAATATA+TGG - 10696:11948-11967 MS.gene060852:intergenic 45.0%
CGATGACTTCCGATTCTGAT+TGG - 10696:10066-10085 MS.gene060852:intergenic 45.0%
CTTCTTGCTCGTTTCACTAC+TGG + 10696:8981-9000 MS.gene060852:CDS 45.0%
GAATGTGTGTATCTCTGCAG+GGG - 10696:9950-9969 MS.gene060852:intergenic 45.0%
GGGCTTATGGGGACTTATTT+CGG + 10696:11957-11976 MS.gene060852:CDS 45.0%
GTGAATGGAAACACGCATTC+GGG + 10696:10132-10151 MS.gene060852:intron 45.0%
TGGTGATTTGAGGAAGGTTC+TGG + 10696:8863-8882 MS.gene060852:CDS 45.0%
TTTGCCAGGTCATACGCAAT+AGG - 10696:11505-11524 MS.gene060852:intergenic 45.0%
! CGTGTCTATCTCAGTTCTGA+AGG + 10696:11741-11760 MS.gene060852:CDS 45.0%
! CTGGTTCGTTTATATGGCGA+AGG + 10696:8882-8901 MS.gene060852:CDS 45.0%
! GGGCTATCATTTGCCTCTTT+TGG + 10696:10382-10401 MS.gene060852:intron 45.0%
!! AGTTTCGGTTTGGGCAACAA+TGG - 10696:12172-12191 MS.gene060852:intergenic 45.0%
!! CTTTGGGGAGCACAAACTTT+TGG - 10696:11211-11230 MS.gene060852:intergenic 45.0%
!! TATAATATAGATATAAAAAA+AGG - 10696:9052-9071 MS.gene060852:intergenic 5.0%
!!! ATTTTATTTTATTTTGATAT+AGG + 10696:11456-11475 MS.gene060852:intron 5.0%
!!! TTTATATCTATATTATATTT+TGG + 10696:9055-9074 MS.gene060852:intron 5.0%
AGTGATTACTGCGGTGGCTT+CGG + 10696:8737-8756 MS.gene060852:CDS 50.0%
ATTCCCGCAAGTCAAGGATC+CGG + 10696:9922-9941 MS.gene060852:intron 50.0%
CGATCTTGATCGAACGACCA+CGG - 10696:9980-9999 MS.gene060852:intergenic 50.0%
CGTGGTCGTTCGATCAAGAT+CGG + 10696:9978-9997 MS.gene060852:intron 50.0%
CTGGAGAAGGAGTTGTGTGA+AGG + 10696:11279-11298 MS.gene060852:CDS 50.0%
GGACGGTCAAGATTCAAGCT+TGG + 10696:9999-10018 MS.gene060852:intron 50.0%
GGCAGAGGTTTCAGCAGTAT+TGG + 10696:12115-12134 MS.gene060852:CDS 50.0%
GTCGTTCGATCAAGATCGGA+CGG + 10696:9982-10001 MS.gene060852:intron 50.0%
ACTGCGGTGGCTTCGGATTT+AGG + 10696:8744-8763 MS.gene060852:CDS 55.0%
CTTTGACGCTCCTCGAGTTC+TGG - 10696:11714-11733 MS.gene060852:intergenic 55.0%
GTGAAACGAGCAAGAAGGCG+TGG - 10696:8978-8997 MS.gene060852:intergenic 55.0%
!! CAGAACTCGAGGAGCGTCAA+AGG + 10696:11712-11731 MS.gene060852:intron 55.0%
GTGTATCTCTGCAGGGGAGC+CGG - 10696:9944-9963 MS.gene060852:intergenic 60.0%
! GGAGCCGGATCCTTGACTTG+CGG - 10696:9929-9948 MS.gene060852:intergenic 60.0%
!! GAGCCGGATCCTTGACTTGC+GGG - 10696:9928-9947 MS.gene060852:intergenic 60.0%


Chromosome Type Strat End Strand Name
10696 gene 8732 12227 8732 ID=MS.gene060852
10696 mRNA 8732 12227 8732 ID=MS.gene060852.t1;Parent=MS.gene060852
10696 exon 8732 9031 8732 ID=MS.gene060852.t1.exon1;Parent=MS.gene060852.t1
10696 CDS 8732 9031 8732 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 10980 11101 10980 ID=MS.gene060852.t1.exon2;Parent=MS.gene060852.t1
10696 CDS 10980 11101 10980 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 11191 11386 11191 ID=MS.gene060852.t1.exon3;Parent=MS.gene060852.t1
10696 CDS 11191 11386 11191 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 11478 11595 11478 ID=MS.gene060852.t1.exon4;Parent=MS.gene060852.t1
10696 CDS 11478 11595 11478 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 11715 11762 11715 ID=MS.gene060852.t1.exon5;Parent=MS.gene060852.t1
10696 CDS 11715 11762 11715 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 11878 11978 11878 ID=MS.gene060852.t1.exon6;Parent=MS.gene060852.t1
10696 CDS 11878 11978 11878 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
10696 exon 12072 12227 12072 ID=MS.gene060852.t1.exon7;Parent=MS.gene060852.t1
10696 CDS 12072 12227 12072 ID=cds.MS.gene060852.t1;Parent=MS.gene060852.t1
Gene Sequence

>MS.gene060852

ATGGAAGTGATTACTGCGGTGGCTTCGGATTTAGGAGATGCCATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATTTGAGGAAGGTTCTGGTTCGTTTATATGGCGAAGGTGTTGAAATTTTCTTCAATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAGCATGGACAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTAGAGTTGAGGAGTTTATTCATGCCAGAGTATGTGATTCTCTTATCCTTTTTTTATATCTATATTATATTTTGGTACTTTGATACTTTTTTATTTATATTTTTGAAGTTTATCATGTACTTTGGAGTCTATATAAATTACAAAAGTACATATTTAACATATCATTTTGTAATTTGTAGAACTAAAAAGTGGATAAGACTAAAAACTAAACATATACTTGACCATTTTAATAAAAAAATCCAATATGATAGAAATATTTCTGCAGCAAATTATTTTTGCTGGGTAGGTAATATAATTAGGGAAAAATTCTAAGTTACACACACTTTTATGAAGTGAAGAGTTTAAGAGATTATGCAGAAACCTTAATTTTATAAGTTAAGAAGTTTGGCCTAATTCAAAATTGAAGAATAGTCAAAGTTAAATTTGATCTAGTTATTGTGATAGTTTTTTTGCATCATGAAACTATGGTATTTAGTTATTTGTTTGATTGCTTTGAGAAGATAGGATCATAAAATTTAAACACTGAAAGAAATGAAATTGTTAAAAGAAAAATCAATTTTGTTGCAATTGGAGCATTGACATATAAGAACCTATTTGGTTTGTTCTATTCAATTAGAGACATATCCAATTATATTTTACTGTTTTGTCATGAAGATTTTGAGAAGTGATGTTATATGTTCAAATAGTGAAATATATAAAATTTCATTATATATGTTAAGTTCTTTCAAATATACACTAAGCTGTTTTCAATTTTCCTGCAAGTAAATTTAGAAAATATTGAAAATAAAAAATAAACAAAAAAATATTCAATAGAAAATAAGGTAGGTTACCTATAAGTTAGTTTAGTTTAGTGTCAAATCATGTCAAGACAAGTTCTTTTATTGGTAGGTTACCTATAAGCCCTCTTAGAGGAAATTGGATTCCCGCAAGTCAAGGATCCGGCTCCCCTGCAGAGATACACACATTCAAGACATCCGTGGTCGTTCGATCAAGATCGGACGGTCAAGATTCAAGCTTGGTATTTTGAATTAAAATCAAAATCTGTATTTTTTTTGTCTTTCCAATCAGAATCGGAAGTCATCGATGTCCTGAATAGGTGTTCTCATTAACTGTAGAAAAATTTCTTGCAGTGAATGGAAACACGCATTCGGGACATCTATGACCGTCCGATCTTGATCTACTTTATATATGTGAGCCCATCATAACATATTATCTTGCAAAATAAAGGGTGCAGTGAATATTTCATTCCATATTTTAGCTTTTGAGATCATAGTCACTTTACAAGTAGATTCACTTTATTGTTTAGTCAAAAGAGCTTTTCTTTGAACTTGTACTTCCTTTTCCCTTAATTTATTCCCTTTATCTTTTGGAGCAATGGAGGGCTATCATTTGCCTCTTTTGGTTGTTTTGGAGTAAATTATTTTTTTGAAGAACCATCTTTAAAAAAGAAATTTAATGGAACGGTATTGAGTCAATGGAATGGAATCATGTGCTCTTAGGTGCTTCTATTACCATCCTTTCTTCCCATATTCCTTTCTTCATGTTATTTATTCTTCCAATAATAATAAAGAAACATGCATTATGTACTTAAACAGTATGTTTTTTGAAAGATATCTGCGATTTCTTTTTATGTATGCATAGAATGATAAGGACTCATGAGTTCATATTCTATTTTACTAATTATTAAATGTTCATTAGTAAACTTGGTAATAGAACTAAATAATTTATGGAACTAAGGTAGTGTCCTTTTTTACAGACACATAAATTCCAGCATACTAGTTTGTTAACTGATTACATCCTGTTAATGTGTTCCTTTTTGTCTGTTGTTGATGTCGCTTTCTATTTTCCAAAGAATTAAAATCAATTGAAAGAGTTTTACCAATACAAGGATGATGAATTTGACAAGCAGTGTTATTTACATTTTTAAGTTTAAGGATTGTGCATAACTCGCTTCTTCTCTTGTTTTTGGCTTTCTAGACTCTCTCAGCTGTTGATCTCCGTGACTCTGAAATATCATCTTTGGTGGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGTACAAAGAAGGCTCATATTTGGCAGAGAATGAGGTAGTTATAGATCATGTCATTCTTAAAATCCATTTGATTTAAAAAAATTATGCAGAATATCAAGTGTTGTTTTCCATGTGTTTTACTAGGAACTGGGTTGGTGAAGCCAAAAGTTTGTGCTCCCCAAAGGAAACAAAAAAATTCGGGCTGGACAATCTAGATGATGAAATAAATATTCTGGAGAAGGAGTTGTGTGAAGGATATCAAGAGATTGGTTTTTGCCACAATGACCTACAATATGGTAACATTATGATGGATGAAGAGACTAGATCAATCACACTAATTGTAAGCTAATGGTTATGTATTTTCTTTTCCTTTCCAAAACATGATAGTTACTTATATTGCAGTACTCTAATTTTATTTTATTTTGATATAGGACTACGAATACGCGAGTTACAATCCTATTGCGTATGACCTGGCAAATCATTTCTGTGAAATGGCAGCAGATTACCATAGTGATACACCTCATGTTCTTGACTACAGTAAATATCCTGGTAAATTTTTTGTTCTTAGTCTTACATTTCCACAATGAGTATTGTGTGTTCTTGTTTTTGTTTTTATTGATATCATCACTCTACCTTGCTGACATACTAATTTGTATATGATGAACCAGAACTCGAGGAGCGTCAAAGGTTCATTCGTGTCTATCTCAGTTCTGAAGGTTAGTCCATTATGAATTTCACTCTGTCGAAATCATAGATTGAAATGCAACACTTCCGAATATCAAATATACTTCTTAAATTTAAGTTTTTCTTACAATCACTCTTTGTACACAGGCAAGAAACCAAGCAATGCTAAGGTGAATCAGTTAATGACGGCTGTAGAAAAATATACTCTCGCAAACCATATATTCTGGGGCTTATGGGGACTTATTTCGGTAAAGCTCTTTTTAATGTAAATAGTACTTGTTAGTTAAGTATATAACTATATATTATATGCTGATACTATACACATGTTTTATTAATTGCAGAGTTATGTGAATAAAATTGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAGTATTGGTTAAGGAAGCCTACTTTATTGGACTCATCAACCATTGTTGCCCAAACCGAAACTGTGAACAGTTCGCTGCCACTAGCATCATGTGTGTGA

Protein sequence

>MS.gene060852.t1

MEVITAVASDLGDAIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFNRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARTLSAVDLRDSEISSLVASKMREFHKLHMPGTKKAHIWQRMRNWVGEAKSLCSPKETKKFGLDNLDDEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYSKYPELEERQRFIRVYLSSEGKKPSNAKVNQLMTAVEKYTLANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDSSTIVAQTETVNSSLPLASCV