AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060851


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060851.t1 MTR_1g097850 94.220 346 6 1 1 346 19 350 0.0 680
MS.gene060851.t1 MTR_6g039820 79.321 324 67 0 1 324 19 342 0.0 560
MS.gene060851.t1 MTR_3g013430 68.000 325 103 1 2 326 131 454 8.32e-175 495
MS.gene060851.t1 MTR_1g097850 92.653 245 4 1 1 245 19 249 2.36e-170 474
MS.gene060851.t1 MTR_8g041330 64.087 323 115 1 2 324 40 361 1.53e-161 458
MS.gene060851.t1 MTR_6g040230 77.021 235 52 1 90 324 263 495 4.93e-132 386
MS.gene060851.t1 MTR_2g054370 33.333 324 193 6 9 324 57 365 1.32e-49 170
MS.gene060851.t1 MTR_8g041220 63.441 93 33 1 220 312 40 131 1.09e-39 137
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060851.t1 AT1G74320 66.258 326 109 1 2 327 23 347 6.27e-169 474
MS.gene060851.t1 AT4G09760 65.123 324 111 2 2 324 19 341 2.77e-165 465
MS.gene060851.t1 AT4G09760 65.123 324 111 2 2 324 19 341 2.77e-165 465
MS.gene060851.t1 AT1G71697 64.308 325 115 1 3 326 22 346 3.89e-163 459
MS.gene060851.t1 AT4G09760 61.650 206 77 2 2 206 19 223 2.06e-92 276
MS.gene060851.t1 AT4G09760 60.733 191 73 2 2 191 19 208 1.22e-83 253
MS.gene060851.t1 AT2G26830 33.123 317 186 7 17 321 58 360 7.89e-52 176

Find 0 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTCAATAGAAAATA+AGG + 10697:9460-9479 MS.gene060851:intron 10.0%
!! TAATAGAACTAAATAATTTA+TGG + 10697:10369-10388 MS.gene060851:intron 10.0%
!!! ATTGGATTTTTTTATTAAAA+TGG - 10697:8885-8904 MS.gene060851:intergenic 10.0%
!!! CATAATTTTTTTAAATCAAA+TGG - 10697:10793-10812 MS.gene060851:intergenic 10.0%
!!! TATTTACATTTTTAAGTTTA+AGG + 10697:10574-10593 MS.gene060851:intron 10.0%
!!! TCTTTAAAAAAGAAATTTAA+TGG + 10697:10098-10117 MS.gene060851:intron 10.0%
!!! TTAAATTTCTTTTTTAAAGA+TGG - 10697:10098-10117 MS.gene060851:intergenic 10.0%
!! AAAAAAGAAATTTAATGGAA+CGG + 10697:10103-10122 MS.gene060851:intron 15.0%
!! ACAAAACAGTAAAATATAAT+TGG - 10697:9288-9307 MS.gene060851:intergenic 15.0%
!! ATATTATCTTGCAAAATAAA+GGG + 10697:9868-9887 MS.gene060851:intron 15.0%
!! CTTCTTAACTTATAAAATTA+AGG - 10697:9024-9043 MS.gene060851:intergenic 15.0%
!!! ATTTTATAAGTTAAGAAGTT+TGG + 10697:9026-9045 MS.gene060851:intron 15.0%
!!! TAAGAAGTATATTTGATATT+CGG - 10697:11481-11500 MS.gene060851:intergenic 15.0%
!!! TTCAATTGATTTTAATTCTT+TGG - 10697:10511-10530 MS.gene060851:intergenic 15.0%
!! AAGATAAAGGGAATAAATTA+AGG - 10697:10008-10027 MS.gene060851:intergenic 20.0%
!! AATTTATGTGTCTGTAAAAA+AGG - 10697:10409-10428 MS.gene060851:intergenic 20.0%
!! ACTAAACTAAACTAACTTAT+AGG - 10697:9493-9512 MS.gene060851:intergenic 20.0%
!! AGAATAAATAACATGAAGAA+AGG - 10697:10196-10215 MS.gene060851:intergenic 20.0%
!! AGATAAAGGGAATAAATTAA+GGG - 10697:10007-10026 MS.gene060851:intergenic 20.0%
!! AGATGATGAAATAAATATTC+TGG + 10697:10919-10938 MS.gene060851:CDS 20.0%
!! ATTTATCTGAAAAACTTCAT+TGG - 10697:8484-8503 MS.gene060851:intergenic 20.0%
!! CATATTATCTTGCAAAATAA+AGG + 10697:9867-9886 MS.gene060851:intron 20.0%
!! CTAAATAATTTATGGAACTA+AGG + 10697:10377-10396 MS.gene060851:intron 20.0%
!! GCATGTTTCTTTATTATTAT+TGG - 10697:10220-10239 MS.gene060851:intergenic 20.0%
!! TAAATGTTCATTAGTAAACT+TGG + 10697:10346-10365 MS.gene060851:intron 20.0%
!! TATATAAAGTAGATCAAGAT+CGG - 10697:9831-9850 MS.gene060851:intergenic 20.0%
!! TATTCAATAGAAAATAAGGT+AGG + 10697:9464-9483 MS.gene060851:intron 20.0%
!!! AAAATCAATTTTGTTGCAAT+TGG + 10697:9209-9228 MS.gene060851:intron 20.0%
!!! AATTTATTCCCTTTATCTTT+TGG + 10697:10009-10028 MS.gene060851:intron 20.0%
!!! ATGAAGTTTTTCAGATAAAT+TGG + 10697:8484-8503 MS.gene060851:CDS 20.0%
!!! CAGAAATATTTCTATCATAT+TGG - 10697:8903-8922 MS.gene060851:intergenic 20.0%
!!! CTATTCTTCAATTTTGAATT+AGG - 10697:9052-9071 MS.gene060851:intergenic 20.0%
!!! TAATTTGTAGAACTAAAAAG+TGG + 10697:8830-8849 MS.gene060851:intron 20.0%
!!! TATAAGTAACTATCATGTTT+TGG - 10697:11083-11102 MS.gene060851:intergenic 20.0%
!!! TATTTTCTAAATTTACTTGC+AGG - 10697:9418-9437 MS.gene060851:intergenic 20.0%
!!! TGTTGAAATTTTCTTCAATA+GGG + 10697:8563-8582 MS.gene060851:CDS 20.0%
! ACAATATGGTAACATTATGA+TGG + 10697:10994-11013 MS.gene060851:CDS 25.0%
! ATAACATGAAGAAAGGAATA+TGG - 10697:10189-10208 MS.gene060851:intergenic 25.0%
! CAAAGGAAACAAAAAAATTC+GGG + 10697:10885-10904 MS.gene060851:CDS 25.0%
! CCAAAGGAAACAAAAAAATT+CGG + 10697:10884-10903 MS.gene060851:CDS 25.0%
! CTAAGAACAAAAAATTTACC+AGG - 10697:11255-11274 MS.gene060851:intergenic 25.0%
! GCAAGATAATATGTTATGAT+GGG - 10697:9860-9879 MS.gene060851:intergenic 25.0%
! TAACATGAAGAAAGGAATAT+GGG - 10697:10188-10207 MS.gene060851:intergenic 25.0%
! TATGTATGCATAGAATGATA+AGG + 10697:10290-10309 MS.gene060851:intron 25.0%
! TCATAATGTTACCATATTGT+AGG - 10697:10994-11013 MS.gene060851:intergenic 25.0%
! TGATCTCAAAAGCTAAAATA+TGG - 10697:9912-9931 MS.gene060851:intergenic 25.0%
! TGCAAGATAATATGTTATGA+TGG - 10697:9861-9880 MS.gene060851:intergenic 25.0%
! TTGAAGTTTATCATGTACTT+TGG + 10697:8763-8782 MS.gene060851:intron 25.0%
! TTGAATAGAACAAACCAAAT+AGG - 10697:9253-9272 MS.gene060851:intergenic 25.0%
! TTGACATATAAGAACCTATT+TGG + 10697:9236-9255 MS.gene060851:intron 25.0%
! TTGATTACAAAGAATATGCA+AGG + 10697:11754-11773 MS.gene060851:CDS 25.0%
!! GTGTTGAAATTTTCTTCAAT+AGG + 10697:8562-8581 MS.gene060851:CDS 25.0%
!! TGAAATAAATATTCTGGAGA+AGG + 10697:10925-10944 MS.gene060851:CDS 25.0%
!!! AAATCACCATCATTTTTTGT+TGG - 10697:8510-8529 MS.gene060851:intergenic 25.0%
!!! CGAATTTTTTTGTTTCCTTT+GGG - 10697:10886-10905 MS.gene060851:intergenic 25.0%
!!! GAATTTTTTTGTTTCCTTTG+GGG - 10697:10885-10904 MS.gene060851:intergenic 25.0%
!!! TTTTTTGCATCATGAAACTA+TGG + 10697:9106-9125 MS.gene060851:intron 25.0%
AAGATGATATTTCAGAGTCA+CGG - 10697:10662-10681 MS.gene060850:intergenic 30.0%
AATTGGCCAACAAAAAATGA+TGG + 10697:8501-8520 MS.gene060851:CDS 30.0%
ACAAAAAGGAACACATTAAC+AGG - 10697:10462-10481 MS.gene060851:intergenic 30.0%
AGGGAATAAATTAAGGGAAA+AGG - 10697:10001-10020 MS.gene060851:intergenic 30.0%
CAAATTCATCATCCTTGTAT+TGG - 10697:10543-10562 MS.gene060851:intergenic 30.0%
CTGGGTAGGTAATATAATTA+GGG + 10697:8939-8958 MS.gene060851:intron 30.0%
GAAAAATTTCTTGCAGTGAA+TGG + 10697:9776-9795 MS.gene060851:intron 30.0%
TAAGGTGAATCAGTTAATGA+CGG + 10697:11557-11576 MS.gene060851:CDS 30.0%
TACAAATTAGTATGTCAGCA+AGG - 10697:11342-11361 MS.gene060851:intergenic 30.0%
TCACACTAATTGTAAGCTAA+TGG + 10697:11035-11054 MS.gene060851:intron 30.0%
TTTGTCTTTCCAATCAGAAT+CGG + 10697:9712-9731 MS.gene060851:intron 30.0%
! AGACAAGTTCTTTTATTGGT+AGG + 10697:9527-9546 MS.gene060851:intron 30.0%
! CAAAAAATGATGGTGATTTG+AGG + 10697:8511-8530 MS.gene060851:CDS 30.0%
! GAAAGAGTTTTACCAATACA+AGG + 10697:10528-10547 MS.gene060851:intron 30.0%
! GTCAAGACAAGTTCTTTTAT+TGG + 10697:9523-9542 MS.gene060851:intron 30.0%
! TGTTTTCCATGTGTTTTACT+AGG + 10697:10828-10847 MS.gene060851:intron 30.0%
!! TGACTCTGAAATATCATCTT+TGG + 10697:10662-10681 MS.gene060851:CDS 30.0%
!! TTTGATTGCTTTGAGAAGAT+AGG + 10697:9143-9162 MS.gene060851:intron 30.0%
!!! CCGAATTTTTTTGTTTCCTT+TGG - 10697:10887-10906 MS.gene060851:intergenic 30.0%
!!! GTAACTATCATGTTTTGGAA+AGG - 10697:11078-11097 MS.gene060851:intergenic 30.0%
!!! TGCAGCAAATTATTTTTGCT+GGG + 10697:8921-8940 MS.gene060851:intron 30.0%
AGAAAGGAATATGGGAAGAA+AGG - 10697:10180-10199 MS.gene060851:intergenic 35.0%
AGAACACACAATACTCATTG+TGG - 10697:11288-11307 MS.gene060851:intergenic 35.0%
CAGTTAACAAACTAGTATGC+TGG - 10697:10432-10451 MS.gene060851:intergenic 35.0%
CCATTGCTCCAAAAGATAAA+GGG - 10697:10020-10039 MS.gene060851:intergenic 35.0%
CGACAGAGTGAAATTCATAA+TGG - 10697:11432-11451 MS.gene060851:intergenic 35.0%
CTTGACTACAGTAAATATCC+TGG + 10697:11234-11253 MS.gene060851:CDS 35.0%
GACATCAACAACAGACAAAA+AGG - 10697:10476-10495 MS.gene060851:intergenic 35.0%
GATAAGAGAATCACATACTC+TGG - 10697:8688-8707 MS.gene060851:intergenic 35.0%
GCTGGGTAGGTAATATAATT+AGG + 10697:8938-8957 MS.gene060851:intron 35.0%
GGCAAATCATTTCTGTGAAA+TGG + 10697:11179-11198 MS.gene060851:CDS 35.0%
GTACAAAGAAGGCTCATATT+TGG + 10697:10727-10746 MS.gene060851:CDS 35.0%
GTTAAGGAAGCCTACTTTAT+TGG + 10697:11797-11816 MS.gene060851:CDS 35.0%
GTTAATGAGAACACCTATTC+AGG - 10697:9752-9771 MS.gene060851:intergenic 35.0%
TAAAGTAGATCAAGATCGGA+CGG - 10697:9827-9846 MS.gene060851:intergenic 35.0%
TACAATCACTCTTTGTACAC+AGG + 10697:11516-11535 MS.gene060851:intron 35.0%
TACCATATTGTAGGTCATTG+TGG - 10697:10985-11004 MS.gene060851:intergenic 35.0%
TACTCCAAAACAACCAAAAG+AGG - 10697:10057-10076 MS.gene060851:intergenic 35.0%
TCCATTGCTCCAAAAGATAA+AGG - 10697:10021-10040 MS.gene060851:intergenic 35.0%
TCTCGCAAACCATATATTCT+GGG + 10697:11596-11615 MS.gene060851:CDS 35.0%
TGTGAAGGATATCAAGAGAT+TGG + 10697:10953-10972 MS.gene060851:CDS 35.0%
TTACTGTAGTCAAGAACATG+AGG - 10697:11228-11247 MS.gene060851:intergenic 35.0%
TTGCAAGTGATTCCATTGAA+AGG + 10697:8450-8469 MS.gene060851:CDS 35.0%
TTTGAGTGTATCTCAAAGCA+TGG + 10697:8603-8622 MS.gene060851:CDS 35.0%
! AAATGATGGTGATTTGAGGA+AGG + 10697:8515-8534 MS.gene060851:CDS 35.0%
! CATGTGTTTTACTAGGAACT+GGG + 10697:10835-10854 MS.gene060851:intron 35.0%
! GAATCCAATTTCCTCTAAGA+GGG - 10697:9564-9583 MS.gene060851:intergenic 35.0%
! GTTGATGAGTCCAATAAAGT+AGG - 10697:11810-11829 MS.gene060851:intergenic 35.0%
! TTTCACAGAAATGATTTGCC+AGG - 10697:11179-11198 MS.gene060851:intergenic 35.0%
!! AAGGTTCTGGTTCGTTTATA+TGG + 10697:8534-8553 MS.gene060851:CDS 35.0%
!! CTCTGAAATATCATCTTTGG+TGG + 10697:10665-10684 MS.gene060851:CDS 35.0%
!! TTTGCCTCTTTTGGTTGTTT+TGG + 10697:10050-10069 MS.gene060851:intron 35.0%
!!! CTGCAGCAAATTATTTTTGC+TGG + 10697:8920-8939 MS.gene060851:intron 35.0%
!!! GCAAATTATTTTTGCTGGGT+AGG + 10697:8925-8944 MS.gene060851:intron 35.0%
!!! TTATCTTTTGGAGCAATGGA+GGG + 10697:10021-10040 MS.gene060851:intron 35.0%
!!! TTTATCTTTTGGAGCAATGG+AGG + 10697:10020-10039 MS.gene060851:intron 35.0%
AACTGTTCACAGTTTCGGTT+TGG - 10697:11842-11861 MS.gene060850:intergenic 40.0%
AAGTCATCGATGTCCTGAAT+AGG + 10697:9736-9755 MS.gene060851:intron 40.0%
ACAAAGAATATGCAAGGCAG+AGG + 10697:11760-11779 MS.gene060851:CDS 40.0%
ACTGTTCACAGTTTCGGTTT+GGG - 10697:11841-11860 MS.gene060851:intergenic 40.0%
AGGAATATGGGAAGAAAGGA+TGG - 10697:10176-10195 MS.gene060851:intergenic 40.0%
AGTGAATGGAAACACGCATT+CGG + 10697:9790-9809 MS.gene060851:intron 40.0%
ATATGAGCCTTCTTTGTACC+AGG - 10697:10726-10745 MS.gene060851:intergenic 40.0%
ATATGATGAACCAGAACTCG+AGG + 10697:11361-11380 MS.gene060851:intron 40.0%
CAAGAAACCAAGCAATGCTA+AGG + 10697:11539-11558 MS.gene060851:CDS 40.0%
CCAGTTCCTAGTAAAACACA+TGG - 10697:10837-10856 MS.gene060851:intergenic 40.0%
CTCATATTTGGCAGAGAATG+AGG + 10697:10739-10758 MS.gene060851:CDS 40.0%
CTCGCAAACCATATATTCTG+GGG + 10697:11597-11616 MS.gene060851:CDS 40.0%
CTCTCGCAAACCATATATTC+TGG + 10697:11595-11614 MS.gene060851:CDS 40.0%
GAACATGAGGTGTATCACTA+TGG - 10697:11215-11234 MS.gene060851:intergenic 40.0%
GAATGGAATCATGTGCTCTT+AGG + 10697:10139-10158 MS.gene060851:intron 40.0%
GATGACTTTCCGATTCTGAT+TGG - 10697:9724-9743 MS.gene060851:intergenic 40.0%
GGAAACAAAAAAATTCGGGC+TGG + 10697:10889-10908 MS.gene060851:CDS 40.0%
GGAATCCAATTTCCTCTAAG+AGG - 10697:9565-9584 MS.gene060851:intergenic 40.0%
TAAGCCCTCTTAGAGGAAAT+TGG + 10697:9557-9576 MS.gene060851:intron 40.0%
TACCAGGCATATGAAGCTTA+TGG - 10697:10710-10729 MS.gene060851:intergenic 40.0%
TCATATGCCTGGTACAAAGA+AGG + 10697:10716-10735 MS.gene060851:CDS 40.0%
TGAATGTGTGTATCTCTGCA+GGG - 10697:9609-9628 MS.gene060851:intergenic 40.0%
TGATTCACCTTAGCATTGCT+TGG - 10697:11549-11568 MS.gene060851:intergenic 40.0%
TGCCACAATGACCTACAATA+TGG + 10697:10980-10999 MS.gene060851:CDS 40.0%
TGTATCTCAAAGCATGGACA+AGG + 10697:8609-8628 MS.gene060851:CDS 40.0%
TTACCTATAAGCCCTCTTAG+AGG + 10697:9550-9569 MS.gene060851:intron 40.0%
TTCCATAAGCTTCATATGCC+TGG + 10697:10705-10724 MS.gene060851:CDS 40.0%
TTGAATGTGTGTATCTCTGC+AGG - 10697:9610-9629 MS.gene060851:intergenic 40.0%
TTGGTCATTGCACCTTTCAA+TGG - 10697:8465-8484 MS.gene060851:intergenic 40.0%
TTTCACTACTGGTAGAGTTG+AGG + 10697:8650-8669 MS.gene060851:CDS 40.0%
! ACGGTATTGAGTCAATGGAA+TGG + 10697:10122-10141 MS.gene060851:intron 40.0%
! ATGGAACGGTATTGAGTCAA+TGG + 10697:10117-10136 MS.gene060851:intron 40.0%
! CAAAGTGTTCACATCATCGA+TGG - 10697:8433-8452 MS.gene060851:intergenic 40.0%
! CCATGTGTTTTACTAGGAAC+TGG + 10697:10834-10853 MS.gene060851:intron 40.0%
! TGTTTTACTAGGAACTGGGT+TGG + 10697:10839-10858 MS.gene060851:intron 40.0%
! TTTCCTCTAAGAGGGCTTAT+AGG - 10697:9556-9575 MS.gene060851:intergenic 40.0%
!! ACCATATATTCTGGGGCTTA+TGG + 10697:11604-11623 MS.gene060851:CDS 40.0%
!! CATATATTCTGGGGCTTATG+GGG + 10697:11606-11625 MS.gene060851:CDS 40.0%
!! CCATATATTCTGGGGCTTAT+GGG + 10697:11605-11624 MS.gene060851:CDS 40.0%
!! GGTTTCAGCAGTATTGGTTA+AGG + 10697:11781-11800 MS.gene060851:CDS 40.0%
!!! CCCTTTATCTTTTGGAGCAA+TGG + 10697:10017-10036 MS.gene060851:intron 40.0%
!!! CTCGCTTCTTCTCTTGTTTT+TGG + 10697:10608-10627 MS.gene060851:intron 40.0%
AATTGGATTCCCGCAAGTCA+AGG + 10697:9574-9593 MS.gene060851:intron 45.0%
ACACACATTCAAGACATCCG+TGG + 10697:9618-9637 MS.gene060851:intron 45.0%
CAAAAGTTTGTGCTCCCCAA+AGG + 10697:10868-10887 MS.gene060851:CDS 45.0%
CAATCCTATTGCGTATGACC+TGG + 10697:11158-11177 MS.gene060851:CDS 45.0%
CAGCGAACTGTTCACAGTTT+CGG - 10697:11847-11866 MS.gene060851:intergenic 45.0%
CAGTAGTGAAACGAGCAAGA+AGG - 10697:8641-8660 MS.gene060851:intergenic 45.0%
CCCATAAGCCCCAGAATATA+TGG - 10697:11608-11627 MS.gene060851:intergenic 45.0%
CTTCTTGCTCGTTTCACTAC+TGG + 10697:8639-8658 MS.gene060851:CDS 45.0%
GAATGTGTGTATCTCTGCAG+GGG - 10697:9608-9627 MS.gene060851:intergenic 45.0%
GGGCTTATGGGGACTTATTT+CGG + 10697:11617-11636 MS.gene060851:CDS 45.0%
GTGAATGGAAACACGCATTC+GGG + 10697:9791-9810 MS.gene060851:intron 45.0%
TGGTGATTTGAGGAAGGTTC+TGG + 10697:8521-8540 MS.gene060851:CDS 45.0%
TTTGCCAGGTCATACGCAAT+AGG - 10697:11165-11184 MS.gene060851:intergenic 45.0%
! CGTGTCTATCTCAGTTCTGA+AGG + 10697:11401-11420 MS.gene060851:CDS 45.0%
! CTGGTTCGTTTATATGGCGA+AGG + 10697:8540-8559 MS.gene060851:CDS 45.0%
! GGGCTATCATTTGCCTCTTT+TGG + 10697:10041-10060 MS.gene060851:intron 45.0%
!! AGTTTCGGTTTGGGCAACAA+TGG - 10697:11832-11851 MS.gene060851:intergenic 45.0%
!! CTTTGGGGAGCACAAACTTT+TGG - 10697:10870-10889 MS.gene060851:intergenic 45.0%
!! TATAATATAGATATAAAAAA+AGG - 10697:8710-8729 MS.gene060851:intergenic 5.0%
!!! ATTTTATTTTATTTTGATAT+AGG + 10697:11116-11135 MS.gene060851:intron 5.0%
!!! TTTATATCTATATTATATTT+TGG + 10697:8713-8732 MS.gene060851:intron 5.0%
AGTGATTACTGCGGTGGCTT+CGG + 10697:8395-8414 MS.gene060851:CDS 50.0%
ATTCCCGCAAGTCAAGGATC+CGG + 10697:9580-9599 MS.gene060851:intron 50.0%
CGATCTTGATCGAACGACCA+CGG - 10697:9638-9657 MS.gene060851:intergenic 50.0%
CGTGGTCGTTCGATCAAGAT+CGG + 10697:9636-9655 MS.gene060851:intron 50.0%
CTGGAGAAGGAGTTGTGTGA+AGG + 10697:10938-10957 MS.gene060851:CDS 50.0%
GGACGGTCAAGATTCAAGCT+TGG + 10697:9657-9676 MS.gene060851:intron 50.0%
GGCAGAGGTTTCAGCAGTAT+TGG + 10697:11775-11794 MS.gene060851:CDS 50.0%
GTCGTTCGATCAAGATCGGA+CGG + 10697:9640-9659 MS.gene060851:intron 50.0%
ACTGCGGTGGCTTCGGATTT+AGG + 10697:8402-8421 MS.gene060851:CDS 55.0%
CTTTGACGCTCCTCGAGTTC+TGG - 10697:11374-11393 MS.gene060851:intergenic 55.0%
GTGAAACGAGCAAGAAGGCG+TGG - 10697:8636-8655 MS.gene060851:intergenic 55.0%
!! CAGAACTCGAGGAGCGTCAA+AGG + 10697:11372-11391 MS.gene060851:intron 55.0%
GTGTATCTCTGCAGGGGAGC+CGG - 10697:9602-9621 MS.gene060851:intergenic 60.0%
! GGAGCCGGATCCTTGACTTG+CGG - 10697:9587-9606 MS.gene060851:intergenic 60.0%
!! GAGCCGGATCCTTGACTTGC+GGG - 10697:9586-9605 MS.gene060851:intergenic 60.0%


Chromosome Type Strat End Strand Name
10697 gene 8390 11887 8390 ID=MS.gene060851
10697 mRNA 8390 11887 8390 ID=MS.gene060851.t1;Parent=MS.gene060851
10697 exon 8390 8689 8390 ID=MS.gene060851.t1.exon1;Parent=MS.gene060851.t1
10697 CDS 8390 8689 8390 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 10639 10760 10639 ID=MS.gene060851.t1.exon2;Parent=MS.gene060851.t1
10697 CDS 10639 10760 10639 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 10850 11045 10850 ID=MS.gene060851.t1.exon3;Parent=MS.gene060851.t1
10697 CDS 10850 11045 10850 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 11138 11255 11138 ID=MS.gene060851.t1.exon4;Parent=MS.gene060851.t1
10697 CDS 11138 11255 11138 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 11375 11422 11375 ID=MS.gene060851.t1.exon5;Parent=MS.gene060851.t1
10697 CDS 11375 11422 11375 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 11538 11638 11538 ID=MS.gene060851.t1.exon6;Parent=MS.gene060851.t1
10697 CDS 11538 11638 11538 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
10697 exon 11732 11887 11732 ID=MS.gene060851.t1.exon7;Parent=MS.gene060851.t1
10697 CDS 11732 11887 11732 ID=cds.MS.gene060851.t1;Parent=MS.gene060851.t1
Gene Sequence

>MS.gene060851

ATGGAAGTGATTACTGCGGTGGCTTCGGATTTAGGAGATGCCATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATTTGAGGAAGGTTCTGGTTCGTTTATATGGCGAAGGTGTTGAAATTTTCTTCAATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAGCATGGACAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTAGAGTTGAGGAGTTTATTCATGCCAGAGTATGTGATTCTCTTATCCTTTTTTTATATCTATATTATATTTTGGTACTTTGATACTTTTTTATTTATATTTTTGAAGTTTATCATGTACTTTGGAGTCTATATAAATTACAAAAGTACATATTTAACATATCATTTTGTAATTTGTAGAACTAAAAAGTGGATAAGACTAAAAACTAAACATATACTTGACCATTTTAATAAAAAAATCCAATATGATAGAAATATTTCTGCAGCAAATTATTTTTGCTGGGTAGGTAATATAATTAGGGAAAAATTCTAAGTTACACACACTTTTATGAAGTGAAGAGTTTAAGAGATTATGCAGAAACCTTAATTTTATAAGTTAAGAAGTTTGGCCTAATTCAAAATTGAAGAATAGTCAAAGTTAAATTTGATCTAGTTATTGTGATAGTTTTTTTGCATCATGAAACTATGGTATTTAGTTATTTGTTTGATTGCTTTGAGAAGATAGGATCATAAAATTTAAACACTGAAAGAAATGAAATTGTTAAAAGAAAAATCAATTTTGTTGCAATTGGAGCATTGACATATAAGAACCTATTTGGTTTGTTCTATTCAATTAGAGACATATCCAATTATATTTTACTGTTTTGTCATGAAGATTTTGAGAAGTGATGTTATATGTTCAAATAGTGAAATATATAAAATTTCATTATATATGTTAAGTTCTTTCAAATATACACTAAGCTGTTTTCAATTTTCCTGCAAGTAAATTTAGAAAATATTGAAAATAAAAAATAAACAAAAAAATATTCAATAGAAAATAAGGTAGGTTACCTATAAGTTAGTTTAGTTTAGTGTCAAATCATGTCAAGACAAGTTCTTTTATTGGTAGGTTACCTATAAGCCCTCTTAGAGGAAATTGGATTCCCGCAAGTCAAGGATCCGGCTCCCCTGCAGAGATACACACATTCAAGACATCCGTGGTCGTTCGATCAAGATCGGACGGTCAAGATTCAAGCTTGGTATTTTGAATTAAAATCAAAATCTGTATTTTTTTTGTCTTTCCAATCAGAATCGGAAAGTCATCGATGTCCTGAATAGGTGTTCTCATTAACTGTAGAAAAATTTCTTGCAGTGAATGGAAACACGCATTCGGGACATCTATGACCGTCCGATCTTGATCTACTTTATATATGTGAGCCCATCATAACATATTATCTTGCAAAATAAAGGGTGCAGTGAATATTTCATTCCATATTTTAGCTTTTGAGATCATAGTCACTTTACAAGTAGATTCACTTTATTGTTTAGTCAAAAGAGCTTTTCTTTGAACTTGTACTTCCTTTTCCCTTAATTTATTCCCTTTATCTTTTGGAGCAATGGAGGGCTATCATTTGCCTCTTTTGGTTGTTTTGGAGTAAATTATTTTTTTGAAGAACCATCTTTAAAAAAGAAATTTAATGGAACGGTATTGAGTCAATGGAATGGAATCATGTGCTCTTAGGTGCTTCTATTACCATCCTTTCTTCCCATATTCCTTTCTTCATGTTATTTATTCTTCCAATAATAATAAAGAAACATGCATTATGTACTTAAACAGTATGTTTTTTGAAAGATATCTGCGATTTCTTTTTATGTATGCATAGAATGATAAGGACTCATGAGTTCATATTCTATTTTACTAATTATTAAATGTTCATTAGTAAACTTGGTAATAGAACTAAATAATTTATGGAACTAAGGTAGTGTCCTTTTTTACAGACACATAAATTCCAGCATACTAGTTTGTTAACTGATTACATCCTGTTAATGTGTTCCTTTTTGTCTGTTGTTGATGTCGCTTTCTATTTTCCAAAGAATTAAAATCAATTGAAAGAGTTTTACCAATACAAGGATGATGAATTTGACAAGCAGTGTTATTTACATTTTTAAGTTTAAGGATTGTGCATAACTCGCTTCTTCTCTTGTTTTTGGCTTTCTAGACTCTCTCAGCTGTTGATCTCCGTGACTCTGAAATATCATCTTTGGTGGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGTACAAAGAAGGCTCATATTTGGCAGAGAATGAGGTAGTTATAGATCATGTCATTCTTAAAATCCATTTGATTTAAAAAAATTATGCAGAATATCAAGTGTTGTTTTCCATGTGTTTTACTAGGAACTGGGTTGGTGAAGCCAAAAGTTTGTGCTCCCCAAAGGAAACAAAAAAATTCGGGCTGGACAATCTAGATGATGAAATAAATATTCTGGAGAAGGAGTTGTGTGAAGGATATCAAGAGATTGGTTTTTGCCACAATGACCTACAATATGGTAACATTATGATGGATGAAGAGACTAGATCAATCACACTAATTGTAAGCTAATGGTTATGTATTTTCTTTTTCCTTTCCAAAACATGATAGTTACTTATATTGCAGTACTCTAATTTTATTTTATTTTGATATAGGACTACGAATACGCGAGTTACAATCCTATTGCGTATGACCTGGCAAATCATTTCTGTGAAATGGCAGCAGATTACCATAGTGATACACCTCATGTTCTTGACTACAGTAAATATCCTGGTAAATTTTTTGTTCTTAGTCTTACATTTCCACAATGAGTATTGTGTGTTCTTGTTTTTGTTTTTATTGATATCATCACTCTACCTTGCTGACATACTAATTTGTATATGATGAACCAGAACTCGAGGAGCGTCAAAGGTTCATTCGTGTCTATCTCAGTTCTGAAGGTTAGTCCATTATGAATTTCACTCTGTCGAAATCATAGATTGAAATGCAACACTTCCGAATATCAAATATACTTCTTAAATTTAAGTTTTTCTTACAATCACTCTTTGTACACAGGCAAGAAACCAAGCAATGCTAAGGTGAATCAGTTAATGACGGCTGTAGAAAAATATACTCTCGCAAACCATATATTCTGGGGCTTATGGGGACTTATTTCGGTAAAGCTCTTTTTAATGTAAATAGTACTTGTTAGTTAAGTATATAACTATATATTATATGCTGATACTATACACATGTTTTATTAATTGCAGAGTTATGTGAATAAAATTGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAGTATTGGTTAAGGAAGCCTACTTTATTGGACTCATCAACCATTGTTGCCCAAACCGAAACTGTGAACAGTTCGCTGCCACTAGCATCATGTGTGTGA

Protein sequence

>MS.gene060851.t1

MEVITAVASDLGDAIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFNRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARTLSAVDLRDSEISSLVASKMREFHKLHMPGTKKAHIWQRMRNWVGEAKSLCSPKETKKFGLDNLDDEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYSKYPELEERQRFIRVYLSSEGKKPSNAKVNQLMTAVEKYTLANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDSSTIVAQTETVNSSLPLASCV