Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37080.t1 | XP_013443411.1 | 98.7 | 387 | 5 | 0 | 1 | 387 | 1 | 387 | 2.60E-218 | 767.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37080.t1 | Q6ZHC8 | 67.4 | 384 | 123 | 2 | 1 | 383 | 1 | 383 | 5.9e-155 | 548.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37080.t1 | A0A072TJV7 | 98.7 | 387 | 5 | 0 | 1 | 387 | 1 | 387 | 1.9e-218 | 767.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37080 | MS.gene76034 | PPI |
| MS.gene012148 | MS.gene37080 | PPI |
| MS.gene37080 | MS.gene017596 | PPI |
| MS.gene37080 | MS.gene28884 | PPI |
| MS.gene074258 | MS.gene37080 | PPI |
| MS.gene37080 | MS.gene28886 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37080.t1 | MTR_0015s0140 | 98.708 | 387 | 5 | 0 | 1 | 387 | 1 | 387 | 0.0 | 793 |
| MS.gene37080.t1 | MTR_0015s0140 | 96.516 | 287 | 10 | 0 | 101 | 387 | 47 | 333 | 0.0 | 574 |
| MS.gene37080.t1 | MTR_7g081020 | 53.887 | 373 | 155 | 5 | 9 | 370 | 4 | 370 | 2.36e-145 | 417 |
| MS.gene37080.t1 | MTR_1g112840 | 53.403 | 382 | 159 | 5 | 1 | 370 | 1 | 375 | 7.13e-145 | 417 |
| MS.gene37080.t1 | MTR_1g116260 | 53.351 | 373 | 153 | 5 | 7 | 370 | 8 | 368 | 1.33e-138 | 400 |
| MS.gene37080.t1 | MTR_2g033910 | 50.532 | 376 | 179 | 4 | 1 | 373 | 1 | 372 | 7.31e-138 | 398 |
| MS.gene37080.t1 | MTR_8g074930 | 53.043 | 345 | 151 | 3 | 37 | 370 | 29 | 373 | 4.02e-133 | 387 |
| MS.gene37080.t1 | MTR_1g106855 | 55.590 | 322 | 140 | 1 | 36 | 354 | 18 | 339 | 1.97e-129 | 377 |
| MS.gene37080.t1 | MTR_1g067210 | 53.644 | 343 | 149 | 3 | 38 | 370 | 27 | 369 | 1.18e-127 | 372 |
| MS.gene37080.t1 | MTR_3g032660 | 49.109 | 393 | 179 | 8 | 1 | 386 | 1 | 379 | 2.25e-123 | 363 |
| MS.gene37080.t1 | MTR_3g032700 | 48.855 | 393 | 180 | 8 | 1 | 386 | 1 | 379 | 7.93e-123 | 362 |
| MS.gene37080.t1 | MTR_7g100240 | 54.878 | 328 | 139 | 3 | 38 | 356 | 22 | 349 | 5.61e-121 | 355 |
| MS.gene37080.t1 | MTR_7g090550 | 52.459 | 366 | 146 | 10 | 1 | 353 | 1 | 351 | 1.21e-119 | 354 |
| MS.gene37080.t1 | MTR_7g081020 | 53.922 | 306 | 126 | 4 | 9 | 305 | 4 | 303 | 1.60e-116 | 342 |
| MS.gene37080.t1 | MTR_7g090530 | 49.485 | 388 | 174 | 8 | 1 | 380 | 1 | 374 | 1.69e-116 | 346 |
| MS.gene37080.t1 | MTR_1g106855 | 53.455 | 275 | 125 | 1 | 36 | 307 | 18 | 292 | 5.15e-102 | 304 |
| MS.gene37080.t1 | MTR_8g074930 | 53.640 | 261 | 118 | 2 | 113 | 370 | 1 | 261 | 1.78e-100 | 299 |
| MS.gene37080.t1 | MTR_3g032590 | 50.694 | 288 | 134 | 5 | 105 | 386 | 100 | 385 | 3.47e-92 | 284 |
| MS.gene37080.t1 | MTR_4g113480 | 41.176 | 323 | 174 | 7 | 38 | 353 | 34 | 347 | 3.30e-70 | 230 |
| MS.gene37080.t1 | MTR_4g113345 | 35.838 | 346 | 185 | 11 | 41 | 380 | 22 | 336 | 1.08e-55 | 186 |
| MS.gene37080.t1 | MTR_7g090540 | 47.964 | 221 | 92 | 6 | 165 | 380 | 5 | 207 | 4.95e-50 | 169 |
| MS.gene37080.t1 | MTR_4g113210 | 37.838 | 259 | 134 | 7 | 38 | 286 | 16 | 257 | 9.17e-50 | 168 |
| MS.gene37080.t1 | MTR_7g060770 | 31.757 | 296 | 172 | 10 | 78 | 353 | 262 | 547 | 1.91e-38 | 145 |
| MS.gene37080.t1 | MTR_4g076560 | 30.435 | 299 | 185 | 8 | 78 | 361 | 201 | 491 | 2.96e-37 | 141 |
| MS.gene37080.t1 | MTR_4g119830 | 31.698 | 265 | 161 | 6 | 101 | 352 | 230 | 487 | 6.40e-34 | 132 |
| MS.gene37080.t1 | MTR_4g098650 | 28.247 | 308 | 155 | 8 | 111 | 358 | 472 | 773 | 3.31e-27 | 114 |
| MS.gene37080.t1 | MTR_4g063905 | 28.000 | 275 | 153 | 8 | 118 | 353 | 428 | 696 | 5.59e-26 | 110 |
| MS.gene37080.t1 | MTR_3g464650 | 28.777 | 278 | 141 | 8 | 75 | 350 | 90 | 312 | 2.48e-25 | 105 |
| MS.gene37080.t1 | MTR_3g464700 | 30.667 | 225 | 115 | 5 | 75 | 298 | 114 | 298 | 4.03e-25 | 104 |
| MS.gene37080.t1 | MTR_5g071550 | 29.078 | 282 | 143 | 9 | 75 | 354 | 150 | 376 | 2.96e-24 | 103 |
| MS.gene37080.t1 | MTR_3g091060 | 26.269 | 335 | 172 | 11 | 31 | 355 | 74 | 343 | 1.55e-22 | 98.2 |
| MS.gene37080.t1 | MTR_1g085530 | 30.899 | 178 | 114 | 3 | 180 | 353 | 712 | 884 | 4.47e-21 | 95.9 |
| MS.gene37080.t1 | MTR_5g071550 | 30.317 | 221 | 111 | 7 | 75 | 293 | 150 | 329 | 1.29e-19 | 89.7 |
| MS.gene37080.t1 | MTR_7g093240 | 32.667 | 150 | 64 | 4 | 158 | 304 | 4 | 119 | 2.42e-19 | 83.6 |
| MS.gene37080.t1 | MTR_3g105730 | 27.984 | 243 | 136 | 6 | 79 | 320 | 43 | 247 | 3.75e-18 | 84.0 |
| MS.gene37080.t1 | MTR_1g014640 | 28.676 | 272 | 136 | 9 | 79 | 350 | 108 | 321 | 4.99e-18 | 84.7 |
| MS.gene37080.t1 | MTR_1g013400 | 28.676 | 272 | 136 | 9 | 79 | 350 | 108 | 321 | 4.99e-18 | 84.7 |
| MS.gene37080.t1 | MTR_3g105730 | 27.984 | 243 | 136 | 6 | 79 | 320 | 65 | 269 | 5.51e-18 | 84.0 |
| MS.gene37080.t1 | MTR_5g024340 | 28.235 | 255 | 136 | 8 | 70 | 316 | 115 | 330 | 5.60e-18 | 85.1 |
| MS.gene37080.t1 | MTR_1g115570 | 28.571 | 224 | 116 | 7 | 79 | 301 | 126 | 306 | 1.82e-17 | 83.2 |
| MS.gene37080.t1 | MTR_1g086350 | 26.923 | 260 | 129 | 9 | 77 | 316 | 116 | 334 | 2.05e-17 | 83.6 |
| MS.gene37080.t1 | MTR_1g086350 | 26.923 | 260 | 129 | 9 | 77 | 316 | 100 | 318 | 2.14e-17 | 83.2 |
| MS.gene37080.t1 | MTR_4g094542 | 27.419 | 248 | 132 | 9 | 73 | 315 | 144 | 348 | 8.79e-17 | 81.3 |
| MS.gene37080.t1 | MTR_4g125810 | 28.405 | 257 | 130 | 10 | 56 | 298 | 229 | 445 | 4.10e-16 | 80.1 |
| MS.gene37080.t1 | MTR_4g037470 | 27.010 | 311 | 168 | 13 | 76 | 356 | 102 | 383 | 4.83e-16 | 79.7 |
| MS.gene37080.t1 | MTR_1g086350 | 26.667 | 255 | 126 | 9 | 82 | 316 | 19 | 232 | 5.36e-16 | 78.2 |
| MS.gene37080.t1 | MTR_4g037470 | 27.010 | 311 | 168 | 13 | 76 | 356 | 93 | 374 | 5.81e-16 | 79.7 |
| MS.gene37080.t1 | MTR_2g078760 | 28.340 | 247 | 124 | 9 | 79 | 317 | 38 | 239 | 6.51e-16 | 77.4 |
| MS.gene37080.t1 | MTR_2g078760 | 27.018 | 285 | 149 | 11 | 46 | 317 | 80 | 318 | 1.46e-15 | 77.4 |
| MS.gene37080.t1 | MTR_4g094208 | 26.354 | 277 | 153 | 10 | 54 | 321 | 32 | 266 | 4.06e-15 | 75.5 |
| MS.gene37080.t1 | MTR_4g116420 | 26.645 | 304 | 155 | 12 | 65 | 355 | 105 | 353 | 5.48e-15 | 76.3 |
| MS.gene37080.t1 | MTR_3g104710 | 25.828 | 302 | 160 | 9 | 79 | 359 | 286 | 544 | 1.27e-14 | 75.9 |
| MS.gene37080.t1 | MTR_2g435550 | 27.458 | 295 | 164 | 10 | 76 | 351 | 75 | 338 | 5.90e-14 | 72.8 |
| MS.gene37080.t1 | MTR_2g435550 | 27.458 | 295 | 164 | 10 | 76 | 351 | 89 | 352 | 6.40e-14 | 72.8 |
| MS.gene37080.t1 | MTR_2g090190 | 26.646 | 319 | 176 | 12 | 76 | 365 | 87 | 376 | 6.98e-14 | 73.2 |
| MS.gene37080.t1 | MTR_4g123080 | 28.125 | 256 | 131 | 10 | 77 | 316 | 93 | 311 | 2.24e-13 | 71.2 |
| MS.gene37080.t1 | MTR_4g123080 | 28.125 | 256 | 131 | 10 | 77 | 316 | 111 | 329 | 3.12e-13 | 70.9 |
| MS.gene37080.t1 | MTR_4g007440 | 25.094 | 267 | 135 | 8 | 79 | 305 | 52 | 293 | 1.18e-12 | 68.9 |
| MS.gene37080.t1 | MTR_7g112490 | 23.026 | 304 | 177 | 11 | 76 | 352 | 88 | 361 | 3.04e-12 | 67.8 |
| MS.gene37080.t1 | MTR_7g112490 | 23.026 | 304 | 177 | 11 | 76 | 352 | 106 | 379 | 3.24e-12 | 67.8 |
| MS.gene37080.t1 | MTR_2g435550 | 27.099 | 262 | 155 | 8 | 76 | 318 | 89 | 333 | 4.36e-12 | 67.4 |
| MS.gene37080.t1 | MTR_2g008850 | 26.172 | 256 | 138 | 11 | 73 | 321 | 13 | 224 | 5.17e-12 | 65.5 |
| MS.gene37080.t1 | MTR_1g050520 | 24.852 | 338 | 180 | 14 | 33 | 352 | 363 | 644 | 5.48e-12 | 67.8 |
| MS.gene37080.t1 | MTR_1g028300 | 28.287 | 251 | 144 | 8 | 74 | 324 | 140 | 354 | 5.69e-12 | 67.0 |
| MS.gene37080.t1 | MTR_1g015110 | 27.826 | 230 | 125 | 10 | 79 | 298 | 290 | 488 | 7.12e-12 | 67.4 |
| MS.gene37080.t1 | MTR_2g008850 | 25.532 | 282 | 153 | 13 | 53 | 321 | 33 | 270 | 8.70e-12 | 65.5 |
| MS.gene37080.t1 | MTR_8g463130 | 27.273 | 242 | 127 | 12 | 82 | 317 | 41 | 239 | 1.04e-11 | 65.1 |
| MS.gene37080.t1 | MTR_8g463130 | 27.273 | 242 | 127 | 12 | 82 | 317 | 69 | 267 | 1.38e-11 | 65.1 |
| MS.gene37080.t1 | MTR_5g063940 | 24.675 | 308 | 160 | 12 | 53 | 350 | 34 | 279 | 1.65e-11 | 64.7 |
| MS.gene37080.t1 | MTR_5g080680 | 24.891 | 229 | 134 | 6 | 79 | 300 | 132 | 329 | 1.84e-11 | 65.5 |
| MS.gene37080.t1 | MTR_8g017240 | 24.823 | 282 | 173 | 10 | 76 | 342 | 83 | 340 | 8.13e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37080.t1 | AT5G06750 | 69.565 | 391 | 111 | 3 | 1 | 383 | 1 | 391 | 0.0 | 555 |
| MS.gene37080.t1 | AT5G06750 | 69.565 | 391 | 111 | 3 | 1 | 383 | 1 | 391 | 0.0 | 555 |
| MS.gene37080.t1 | AT5G06750 | 71.378 | 283 | 76 | 2 | 106 | 383 | 27 | 309 | 1.98e-145 | 415 |
| MS.gene37080.t1 | AT3G51370 | 52.770 | 379 | 161 | 4 | 1 | 370 | 1 | 370 | 2.87e-145 | 417 |
| MS.gene37080.t1 | AT3G51370 | 52.770 | 379 | 161 | 4 | 1 | 370 | 1 | 370 | 2.87e-145 | 417 |
| MS.gene37080.t1 | AT5G66080 | 52.094 | 382 | 165 | 4 | 1 | 370 | 1 | 376 | 1.20e-142 | 410 |
| MS.gene37080.t1 | AT4G38520 | 50.919 | 381 | 170 | 5 | 1 | 370 | 1 | 375 | 7.19e-139 | 402 |
| MS.gene37080.t1 | AT4G38520 | 50.919 | 381 | 170 | 5 | 1 | 370 | 1 | 375 | 7.19e-139 | 402 |
| MS.gene37080.t1 | AT3G12620 | 50.781 | 384 | 173 | 4 | 5 | 378 | 7 | 384 | 6.61e-138 | 399 |
| MS.gene37080.t1 | AT3G12620 | 50.781 | 384 | 173 | 4 | 5 | 378 | 7 | 384 | 6.61e-138 | 399 |
| MS.gene37080.t1 | AT3G17090 | 56.918 | 318 | 136 | 1 | 40 | 356 | 45 | 362 | 5.78e-137 | 396 |
| MS.gene37080.t1 | AT3G55050 | 52.676 | 355 | 155 | 3 | 7 | 352 | 8 | 358 | 4.43e-135 | 391 |
| MS.gene37080.t1 | AT3G55050 | 52.676 | 355 | 155 | 3 | 7 | 352 | 8 | 358 | 4.43e-135 | 391 |
| MS.gene37080.t1 | AT4G33920 | 56.748 | 326 | 137 | 2 | 33 | 354 | 15 | 340 | 2.61e-134 | 389 |
| MS.gene37080.t1 | AT5G02760 | 52.907 | 344 | 153 | 2 | 35 | 370 | 20 | 362 | 1.77e-120 | 353 |
| MS.gene37080.t1 | AT5G66080 | 56.296 | 270 | 109 | 3 | 107 | 370 | 6 | 272 | 1.34e-108 | 320 |
| MS.gene37080.t1 | AT3G17090 | 54.613 | 271 | 122 | 1 | 40 | 309 | 45 | 315 | 7.27e-108 | 320 |
| MS.gene37080.t1 | AT3G51370 | 55.849 | 265 | 115 | 2 | 107 | 370 | 22 | 285 | 1.03e-107 | 318 |
| MS.gene37080.t1 | AT4G33920 | 57.143 | 252 | 104 | 2 | 107 | 354 | 6 | 257 | 2.03e-101 | 302 |
| MS.gene37080.t1 | AT4G33920 | 59.031 | 227 | 89 | 2 | 132 | 354 | 1 | 227 | 1.22e-94 | 284 |
| MS.gene37080.t1 | AT3G16560 | 29.808 | 312 | 177 | 5 | 78 | 352 | 174 | 480 | 5.45e-36 | 137 |
| MS.gene37080.t1 | AT3G16560 | 29.808 | 312 | 177 | 5 | 78 | 352 | 174 | 480 | 5.45e-36 | 137 |
| MS.gene37080.t1 | AT3G16560 | 29.808 | 312 | 177 | 5 | 78 | 352 | 174 | 480 | 5.45e-36 | 137 |
| MS.gene37080.t1 | AT5G02400 | 32.090 | 268 | 142 | 5 | 121 | 353 | 404 | 666 | 6.14e-34 | 133 |
| MS.gene37080.t1 | AT2G35350 | 27.759 | 299 | 160 | 6 | 105 | 352 | 477 | 770 | 2.51e-29 | 120 |
| MS.gene37080.t1 | AT2G40180 | 28.615 | 325 | 153 | 8 | 41 | 354 | 131 | 387 | 3.43e-29 | 117 |
| MS.gene37080.t1 | AT2G46920 | 26.129 | 310 | 158 | 6 | 110 | 353 | 532 | 836 | 3.92e-29 | 120 |
| MS.gene37080.t1 | AT2G46920 | 26.129 | 310 | 158 | 6 | 110 | 353 | 532 | 836 | 3.92e-29 | 120 |
| MS.gene37080.t1 | AT2G46920 | 26.129 | 310 | 158 | 6 | 110 | 353 | 532 | 836 | 3.92e-29 | 120 |
| MS.gene37080.t1 | AT2G46920 | 26.129 | 310 | 158 | 6 | 110 | 353 | 532 | 836 | 3.92e-29 | 120 |
| MS.gene37080.t1 | AT3G09400 | 29.104 | 268 | 149 | 6 | 118 | 353 | 384 | 642 | 6.24e-29 | 119 |
| MS.gene37080.t1 | AT1G07630 | 27.240 | 279 | 160 | 4 | 118 | 358 | 386 | 659 | 1.97e-28 | 117 |
| MS.gene37080.t1 | AT2G28890 | 27.622 | 286 | 161 | 5 | 114 | 358 | 371 | 651 | 2.10e-28 | 117 |
| MS.gene37080.t1 | AT3G16560 | 29.078 | 282 | 158 | 5 | 78 | 322 | 174 | 450 | 3.46e-28 | 115 |
| MS.gene37080.t1 | AT1G07160 | 31.071 | 280 | 138 | 9 | 77 | 354 | 152 | 378 | 5.86e-27 | 110 |
| MS.gene37080.t1 | AT1G67820 | 32.653 | 245 | 121 | 10 | 79 | 317 | 115 | 321 | 8.02e-26 | 108 |
| MS.gene37080.t1 | AT1G67820 | 32.530 | 249 | 124 | 10 | 75 | 317 | 147 | 357 | 9.90e-26 | 108 |
| MS.gene37080.t1 | AT2G30020 | 29.603 | 277 | 137 | 9 | 77 | 350 | 169 | 390 | 1.08e-23 | 102 |
| MS.gene37080.t1 | AT3G09400 | 28.270 | 237 | 129 | 6 | 118 | 322 | 384 | 611 | 1.56e-20 | 94.0 |
| MS.gene37080.t1 | AT4G31750 | 29.832 | 238 | 127 | 7 | 79 | 314 | 64 | 263 | 2.15e-20 | 91.3 |
| MS.gene37080.t1 | AT4G31750 | 29.832 | 238 | 127 | 7 | 79 | 314 | 64 | 263 | 2.15e-20 | 91.3 |
| MS.gene37080.t1 | AT4G31750 | 29.832 | 238 | 127 | 7 | 79 | 314 | 64 | 263 | 2.92e-20 | 90.9 |
| MS.gene37080.t1 | AT2G20630 | 26.471 | 272 | 153 | 11 | 54 | 318 | 34 | 265 | 6.92e-19 | 86.3 |
| MS.gene37080.t1 | AT2G20630 | 26.471 | 272 | 153 | 11 | 54 | 318 | 34 | 265 | 7.19e-19 | 86.7 |
| MS.gene37080.t1 | AT4G28400 | 26.820 | 261 | 147 | 12 | 64 | 321 | 31 | 250 | 1.52e-18 | 85.1 |
| MS.gene37080.t1 | AT3G51470 | 26.774 | 310 | 158 | 11 | 64 | 365 | 47 | 295 | 3.20e-18 | 85.1 |
| MS.gene37080.t1 | AT4G28400 | 26.820 | 261 | 147 | 12 | 64 | 321 | 53 | 272 | 3.24e-18 | 84.3 |
| MS.gene37080.t1 | AT2G33700 | 29.297 | 256 | 134 | 9 | 69 | 316 | 113 | 329 | 3.84e-18 | 85.5 |
| MS.gene37080.t1 | AT3G51470 | 26.861 | 309 | 157 | 11 | 65 | 365 | 92 | 339 | 3.95e-18 | 85.5 |
| MS.gene37080.t1 | AT5G53140 | 23.239 | 284 | 173 | 8 | 42 | 320 | 93 | 336 | 5.50e-18 | 85.5 |
| MS.gene37080.t1 | AT5G53140 | 23.239 | 284 | 173 | 8 | 42 | 320 | 93 | 336 | 5.50e-18 | 85.5 |
| MS.gene37080.t1 | AT5G24940 | 29.018 | 224 | 115 | 6 | 79 | 299 | 64 | 246 | 1.75e-17 | 84.3 |
| MS.gene37080.t1 | AT1G48040 | 27.304 | 293 | 160 | 11 | 35 | 321 | 90 | 335 | 2.18e-17 | 83.6 |
| MS.gene37080.t1 | AT5G10740 | 27.935 | 247 | 123 | 9 | 79 | 316 | 64 | 264 | 4.04e-17 | 82.4 |
| MS.gene37080.t1 | AT5G10740 | 27.935 | 247 | 123 | 9 | 79 | 316 | 64 | 264 | 4.04e-17 | 82.4 |
| MS.gene37080.t1 | AT3G62260 | 26.562 | 256 | 152 | 7 | 69 | 316 | 17 | 244 | 9.60e-17 | 80.5 |
| MS.gene37080.t1 | AT1G43900 | 26.829 | 246 | 130 | 8 | 74 | 313 | 149 | 350 | 2.40e-16 | 80.1 |
| MS.gene37080.t1 | AT3G62260 | 26.459 | 257 | 153 | 7 | 69 | 317 | 107 | 335 | 2.72e-16 | 80.1 |
| MS.gene37080.t1 | AT3G62260 | 26.459 | 257 | 153 | 7 | 69 | 317 | 106 | 334 | 2.73e-16 | 80.1 |
| MS.gene37080.t1 | AT3G16800 | 28.333 | 300 | 149 | 13 | 76 | 351 | 90 | 347 | 3.57e-16 | 79.3 |
| MS.gene37080.t1 | AT3G16800 | 28.333 | 300 | 149 | 13 | 76 | 351 | 90 | 347 | 3.57e-16 | 79.3 |
| MS.gene37080.t1 | AT3G16800 | 28.333 | 300 | 149 | 13 | 76 | 351 | 90 | 347 | 3.57e-16 | 79.3 |
| MS.gene37080.t1 | AT4G26080 | 29.514 | 288 | 156 | 13 | 75 | 350 | 168 | 420 | 3.65e-16 | 80.1 |
| MS.gene37080.t1 | AT3G16800 | 30.213 | 235 | 113 | 10 | 130 | 351 | 56 | 252 | 2.56e-15 | 75.5 |
| MS.gene37080.t1 | AT3G16800 | 30.213 | 235 | 113 | 10 | 130 | 351 | 56 | 252 | 2.56e-15 | 75.5 |
| MS.gene37080.t1 | AT5G26010 | 24.438 | 356 | 229 | 10 | 12 | 357 | 4 | 329 | 4.55e-15 | 75.9 |
| MS.gene37080.t1 | AT2G25620 | 25.088 | 283 | 162 | 10 | 72 | 352 | 122 | 356 | 6.39e-15 | 76.3 |
| MS.gene37080.t1 | AT2G25620 | 25.088 | 283 | 162 | 10 | 72 | 352 | 122 | 356 | 6.39e-15 | 76.3 |
| MS.gene37080.t1 | AT4G28400 | 27.434 | 226 | 123 | 10 | 64 | 288 | 53 | 238 | 1.88e-14 | 73.2 |
| MS.gene37080.t1 | AT1G03590 | 26.623 | 308 | 171 | 14 | 76 | 356 | 87 | 366 | 2.67e-14 | 74.7 |
| MS.gene37080.t1 | AT5G01700 | 26.144 | 306 | 176 | 13 | 76 | 363 | 26 | 299 | 6.74e-14 | 72.4 |
| MS.gene37080.t1 | AT3G17250 | 26.562 | 256 | 141 | 11 | 79 | 321 | 158 | 379 | 1.03e-13 | 72.8 |
| MS.gene37080.t1 | AT5G01700 | 26.144 | 306 | 176 | 13 | 76 | 363 | 75 | 348 | 1.36e-13 | 72.0 |
| MS.gene37080.t1 | AT5G36250 | 27.660 | 329 | 153 | 14 | 76 | 355 | 95 | 387 | 2.42e-13 | 71.6 |
| MS.gene37080.t1 | AT5G57050 | 28.475 | 295 | 147 | 15 | 77 | 350 | 158 | 409 | 3.53e-13 | 70.9 |
| MS.gene37080.t1 | AT4G08260 | 27.155 | 232 | 92 | 9 | 67 | 298 | 14 | 168 | 4.02e-13 | 68.6 |
| MS.gene37080.t1 | AT5G59220 | 29.310 | 232 | 116 | 11 | 79 | 299 | 148 | 342 | 4.60e-13 | 70.5 |
| MS.gene37080.t1 | AT5G57050 | 28.475 | 295 | 147 | 15 | 77 | 350 | 118 | 369 | 5.11e-13 | 70.5 |
| MS.gene37080.t1 | AT3G05640 | 26.280 | 293 | 165 | 11 | 76 | 351 | 90 | 348 | 5.16e-13 | 70.1 |
| MS.gene37080.t1 | AT3G05640 | 26.280 | 293 | 165 | 11 | 76 | 351 | 90 | 348 | 5.16e-13 | 70.1 |
| MS.gene37080.t1 | AT3G05640 | 26.280 | 293 | 165 | 11 | 76 | 351 | 90 | 348 | 5.16e-13 | 70.1 |
| MS.gene37080.t1 | AT4G03415 | 27.010 | 311 | 169 | 14 | 76 | 356 | 94 | 376 | 6.22e-13 | 70.5 |
| MS.gene37080.t1 | AT4G03415 | 27.010 | 311 | 169 | 14 | 76 | 356 | 94 | 376 | 6.22e-13 | 70.5 |
| MS.gene37080.t1 | AT4G03415 | 27.010 | 311 | 169 | 14 | 76 | 356 | 94 | 376 | 6.22e-13 | 70.5 |
| MS.gene37080.t1 | AT1G34750 | 24.675 | 308 | 160 | 12 | 53 | 350 | 34 | 279 | 1.28e-12 | 68.2 |
| MS.gene37080.t1 | AT1G34750 | 24.675 | 308 | 160 | 12 | 53 | 350 | 34 | 279 | 1.28e-12 | 68.2 |
| MS.gene37080.t1 | AT1G34750 | 24.675 | 308 | 160 | 12 | 53 | 350 | 34 | 279 | 1.28e-12 | 68.2 |
| MS.gene37080.t1 | AT1G22280 | 25.649 | 308 | 153 | 11 | 54 | 350 | 36 | 278 | 1.55e-12 | 67.8 |
| MS.gene37080.t1 | AT1G07430 | 25.000 | 244 | 116 | 7 | 79 | 300 | 157 | 355 | 1.98e-12 | 68.9 |
| MS.gene37080.t1 | AT4G31860 | 25.188 | 266 | 126 | 8 | 79 | 300 | 52 | 288 | 2.85e-12 | 67.4 |
| MS.gene37080.t1 | AT1G72770 | 25.490 | 306 | 166 | 10 | 79 | 359 | 238 | 506 | 4.65e-12 | 67.8 |
| MS.gene37080.t1 | AT1G72770 | 25.490 | 306 | 166 | 10 | 79 | 359 | 238 | 506 | 4.65e-12 | 67.8 |
| MS.gene37080.t1 | AT1G72770 | 25.490 | 306 | 166 | 10 | 79 | 359 | 238 | 506 | 4.65e-12 | 67.8 |
| MS.gene37080.t1 | AT4G31860 | 25.188 | 266 | 126 | 8 | 79 | 300 | 52 | 288 | 6.04e-12 | 67.0 |
| MS.gene37080.t1 | AT2G40860 | 25.559 | 313 | 167 | 14 | 50 | 352 | 294 | 550 | 8.99e-12 | 67.0 |
| MS.gene37080.t1 | AT2G40860 | 25.559 | 313 | 167 | 14 | 50 | 352 | 392 | 648 | 1.09e-11 | 67.0 |
| MS.gene37080.t1 | AT2G40860 | 26.071 | 280 | 161 | 12 | 50 | 318 | 392 | 636 | 1.24e-11 | 66.6 |
| MS.gene37080.t1 | AT4G32950 | 24.603 | 252 | 165 | 10 | 76 | 322 | 69 | 300 | 1.73e-11 | 65.1 |
| MS.gene37080.t1 | AT3G15260 | 25.993 | 277 | 137 | 10 | 79 | 350 | 73 | 286 | 6.36e-11 | 63.2 |
| MS.gene37080.t1 | AT3G15260 | 25.993 | 277 | 137 | 10 | 79 | 350 | 73 | 286 | 6.36e-11 | 63.2 |
Find 76 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCATTCATTGAGTTTCT+TGG | 0.151665 | 1.4:+39488094 | None:intergenic |
| CATGGAACATGGCGCATTAA+AGG | 0.259091 | 1.4:-39489493 | MS.gene37080:CDS |
| TTTGCAGGCATTATGCTCTT+TGG | 0.273523 | 1.4:+39489579 | None:intergenic |
| TCTTCTGATCTCCTCTTTGC+AGG | 0.276200 | 1.4:+39489564 | None:intergenic |
| ACAACAATTTGTGAATCTTC+TGG | 0.288612 | 1.4:+39489523 | None:intergenic |
| GCAGGGATTGCTAAAGAAAA+TGG | 0.303612 | 1.4:-39489829 | MS.gene37080:intron |
| TATTTGCATCTGACGGCCTT+TGG | 0.350751 | 1.4:-39488535 | MS.gene37080:CDS |
| TTAACAAACTTGGAAGCTTC+AGG | 0.358209 | 1.4:+39491616 | None:intergenic |
| GTTGTCTTGTCGGTGTTATC+TGG | 0.369737 | 1.4:-39489693 | MS.gene37080:CDS |
| CTATCTCCGAAGATATTATA+AGG | 0.375843 | 1.4:-39489804 | MS.gene37080:CDS |
| ATTTGCATCTGACGGCCTTT+GGG | 0.377162 | 1.4:-39488534 | MS.gene37080:CDS |
| GAGTGCAAGAAGACTTCTTC+AGG | 0.385692 | 1.4:-39488325 | MS.gene37080:CDS |
| TGTGTCAATAAACCCTTTGA+TGG | 0.386707 | 1.4:+39488143 | None:intergenic |
| GCTGTTTCTGCTACGGAAGA+TGG | 0.387642 | 1.4:-39489778 | MS.gene37080:CDS |
| AACGTCAAACATACAGTTCT+AGG | 0.390787 | 1.4:+39488467 | None:intergenic |
| AAAACTCTTGAACACATAGA+TGG | 0.402165 | 1.4:+39488581 | None:intergenic |
| ACTCTTGTTCGACGAAGCTT+TGG | 0.404169 | 1.4:-39489748 | MS.gene37080:CDS |
| AATATGACAAATTTATCGTT+AGG | 0.406015 | 1.4:+39488554 | None:intergenic |
| CATCTGAAGATGCTCTTGTT+TGG | 0.409250 | 1.4:-39491777 | MS.gene37080:CDS |
| CGTGCTGTGATCGGTTCAAC+TGG | 0.411906 | 1.4:-39489634 | MS.gene37080:CDS |
| GATAACACCGGTCGGCTGAT+AGG | 0.419881 | 1.4:+39488611 | None:intergenic |
| AGCATTCCTTATAATATCTT+CGG | 0.421473 | 1.4:+39489798 | None:intergenic |
| AGATTTGCAGAAGGTTGAAA+AGG | 0.421638 | 1.4:-39488259 | MS.gene37080:CDS |
| GATCATAGTCAAGTTGAAAC+TGG | 0.428878 | 1.4:-39491682 | MS.gene37080:CDS |
| CAAATTGTTGTTATGAAACA+TGG | 0.429867 | 1.4:-39489511 | MS.gene37080:CDS |
| TGAATGAGGCAGCAAGGAAA+AGG | 0.452832 | 1.4:-39488296 | MS.gene37080:CDS |
| GGAGATTCTCGTGCTGTGAT+CGG | 0.462599 | 1.4:-39489643 | MS.gene37080:CDS |
| AGAAGGTTGAAAAGGGAATT+CGG | 0.464125 | 1.4:-39488251 | MS.gene37080:CDS |
| GATTTGCAGAAGGTTGAAAA+GGG | 0.465611 | 1.4:-39488258 | MS.gene37080:CDS |
| ATACGTGCATAGCGTCGAAC+TGG | 0.469584 | 1.4:+39491838 | None:intergenic |
| ACACTTCATATCGCTAATCT+TGG | 0.471882 | 1.4:-39489664 | MS.gene37080:CDS |
| ACCGGTCGGCTGATAGGATC+AGG | 0.475700 | 1.4:+39488617 | None:intergenic |
| TTCCCGAGTTATCCATCAAA+GGG | 0.477994 | 1.4:-39488155 | MS.gene37080:CDS |
| TCAAGCTAATGAAGTAATTG+AGG | 0.480948 | 1.4:-39491704 | MS.gene37080:CDS |
| CGACCATGAAATGCAAAAGA+AGG | 0.482660 | 1.4:-39488187 | MS.gene37080:CDS |
| GAGATGATCATTAACAAACT+TGG | 0.483803 | 1.4:+39491606 | None:intergenic |
| GATCAGGTATCAAAATCTAT+AGG | 0.484909 | 1.4:-39488701 | MS.gene37080:intron |
| CTTGTCGGTGTTATCTGGAA+AGG | 0.487408 | 1.4:-39489688 | MS.gene37080:CDS |
| GTTGGTGTTTATGATGGTCA+TGG | 0.489495 | 1.4:-39491643 | MS.gene37080:CDS |
| TTGGGAACACATGACAAATC+AGG | 0.500543 | 1.4:-39488516 | MS.gene37080:CDS |
| AAAGGGTTTATTGACACAGT+TGG | 0.502286 | 1.4:-39488138 | MS.gene37080:CDS |
| ATGGGTTCATGTTGTCTTGT+CGG | 0.503952 | 1.4:-39489703 | MS.gene37080:CDS |
| AAGTGGAACCGCGGGAATGA+AGG | 0.509280 | 1.4:+39488641 | None:intergenic |
| TCTTCAGGCTGCTTTGAATG+AGG | 0.522502 | 1.4:-39488310 | MS.gene37080:CDS |
| AAGGAATGCTGTTTCTGCTA+CGG | 0.524860 | 1.4:-39489785 | MS.gene37080:CDS |
| AAACCCTTTGATGGATAACT+CGG | 0.525953 | 1.4:+39488152 | None:intergenic |
| TTGTCGGTGTTATCTGGAAA+GGG | 0.533139 | 1.4:-39489687 | MS.gene37080:CDS |
| GAATGAGGCAGCAAGGAAAA+GGG | 0.539011 | 1.4:-39488295 | MS.gene37080:CDS |
| TTTGTCATATTTGCATCTGA+CGG | 0.540627 | 1.4:-39488542 | MS.gene37080:CDS |
| AAAGCCACTGATAGCAGCAA+TGG | 0.545876 | 1.4:-39489722 | MS.gene37080:CDS |
| GCGCATTAAAGGCATCATCC+AGG | 0.559771 | 1.4:-39489482 | MS.gene37080:intron |
| GTTCCCGAGTTATCCATCAA+AGG | 0.564305 | 1.4:-39488156 | MS.gene37080:CDS |
| AAGCCACTGATAGCAGCAAT+GGG | 0.565319 | 1.4:-39489721 | MS.gene37080:CDS |
| GCCTGATCCTATCAGCCGAC+CGG | 0.565479 | 1.4:-39488618 | MS.gene37080:CDS |
| GAAGGATCAAATGAGAACTC+TGG | 0.568528 | 1.4:+39488659 | None:intergenic |
| ACGTCAAACATACAGTTCTA+GGG | 0.574904 | 1.4:+39488468 | None:intergenic |
| GGCTGATAGGATCAGGCAAG+TGG | 0.577398 | 1.4:+39488624 | None:intergenic |
| GATCAGGCAAGTGGAACCGC+GGG | 0.583734 | 1.4:+39488633 | None:intergenic |
| GAGATATAAAGATTTGCAGA+AGG | 0.584024 | 1.4:-39488268 | MS.gene37080:CDS |
| CTGCTTTGAATGAGGCAGCA+AGG | 0.594845 | 1.4:-39488302 | MS.gene37080:CDS |
| ATTAGCTTGAACAATAGCAA+AGG | 0.596397 | 1.4:+39491717 | None:intergenic |
| AACCCTTTGATGGATAACTC+GGG | 0.610793 | 1.4:+39488153 | None:intergenic |
| GAACCCATTGCTGCTATCAG+TGG | 0.613615 | 1.4:+39489718 | None:intergenic |
| GATTTGTCATGTGTTCCCAA+AGG | 0.615942 | 1.4:+39488519 | None:intergenic |
| CACCACAAGAGTGTTTCTCA+AGG | 0.621992 | 1.4:+39491746 | None:intergenic |
| CATTTGATCCTTCATTCCCG+CGG | 0.631409 | 1.4:-39488649 | MS.gene37080:CDS |
| GACCTTGAGAAACACTCTTG+TGG | 0.632718 | 1.4:-39491748 | MS.gene37080:CDS |
| TAGGAGATGCATATTTGAAG+CGG | 0.637442 | 1.4:-39488682 | MS.gene37080:CDS |
| AGAGCATAATGCCTGCAAAG+AGG | 0.641485 | 1.4:-39489575 | MS.gene37080:CDS |
| GGATCAGGCAAGTGGAACCG+CGG | 0.643319 | 1.4:+39488632 | None:intergenic |
| GATGGTTCTGCTGATAACAC+CGG | 0.667990 | 1.4:+39488599 | None:intergenic |
| TTGTTATGAAACATGGAACA+TGG | 0.679272 | 1.4:-39489504 | MS.gene37080:CDS |
| GGTGTTTATGATGGTCATGG+TGG | 0.696441 | 1.4:-39491640 | MS.gene37080:CDS |
| CAACCACTGTGATATCATCG+TGG | 0.720113 | 1.4:+39488220 | None:intergenic |
| GTTCTGCTGATAACACCGGT+CGG | 0.727197 | 1.4:+39488603 | None:intergenic |
| TTTCCACGATGATATCACAG+TGG | 0.728364 | 1.4:-39488223 | MS.gene37080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTTTGTTGAAAATTT+GGG | - | chr1.4:39488852-39488871 | MS.gene37080:intron | 10.0% |
| !!! | ATTTTTTAATGTTGAATAAA+TGG | - | chr1.4:39488668-39488687 | MS.gene37080:CDS | 10.0% |
| !!! | TAAAAATATCATATTTTTGT+TGG | - | chr1.4:39491112-39491131 | MS.gene37080:intron | 10.0% |
| !!! | TATATATTTTGTTGAAAATT+TGG | - | chr1.4:39488851-39488870 | MS.gene37080:intron | 10.0% |
| !! | ATCATTATTAGTTAAATTCA+TGG | + | chr1.4:39491187-39491206 | None:intergenic | 15.0% |
| !! | TTTACTATAATAACACAATT+TGG | - | chr1.4:39489620-39489639 | MS.gene37080:CDS | 15.0% |
| !!! | TAAACTTCTAAAATTACTTA+TGG | + | chr1.4:39489696-39489715 | None:intergenic | 15.0% |
| !!! | TATATTTTGTTGAAAATTTG+GGG | - | chr1.4:39488853-39488872 | MS.gene37080:intron | 15.0% |
| !!! | TTTTATTAAATAATATGGCA+TGG | - | chr1.4:39488912-39488931 | MS.gene37080:intron | 15.0% |
| !! | AAAAAAAATGTAATCATTGC+TGG | + | chr1.4:39490030-39490049 | None:intergenic | 20.0% |
| !! | AAAAAAAATTGTGATCAAAC+CGG | - | chr1.4:39488760-39488779 | MS.gene37080:intron | 20.0% |
| !! | AATATGACAAATTTATCGTT+AGG | + | chr1.4:39491430-39491449 | None:intergenic | 20.0% |
| !! | AATTCATGTTCAAAATAGAT+AGG | + | chr1.4:39490873-39490892 | None:intergenic | 20.0% |
| !! | AATTGATCTATAAGAAGTTA+AGG | - | chr1.4:39490107-39490126 | MS.gene37080:intron | 20.0% |
| !! | CAAAATATTTAACCATGTAA+TGG | + | chr1.4:39490677-39490696 | None:intergenic | 20.0% |
| !! | GGACGAAAAAAATTATTAAA+CGG | + | chr1.4:39491540-39491559 | None:intergenic | 20.0% |
| !!! | AGCTTTTTTTTGTTGTTATT+TGG | - | chr1.4:39489027-39489046 | MS.gene37080:intron | 20.0% |
| !!! | ATCATGTATTTTTCATATTC+GGG | + | chr1.4:39489889-39489908 | None:intergenic | 20.0% |
| !!! | CATCATGTATTTTTCATATT+CGG | + | chr1.4:39489890-39489909 | None:intergenic | 20.0% |
| !!! | CTATACAGTTTTTCTTAAAA+AGG | - | chr1.4:39490640-39490659 | MS.gene37080:intron | 20.0% |
| !!! | CTTTTTAAGAAAAACTGTAT+AGG | + | chr1.4:39490642-39490661 | None:intergenic | 20.0% |
| !!! | TGCTTATTTTTTTAACAACA+GGG | - | chr1.4:39491633-39491652 | MS.gene37080:CDS | 20.0% |
| !!! | TTCCAATCACAAATTTTTAA+AGG | + | chr1.4:39489863-39489882 | None:intergenic | 20.0% |
| !!! | TTGAATCTTGAATTATTTTG+AGG | - | chr1.4:39491041-39491060 | MS.gene37080:intron | 20.0% |
| !!! | TTGATCAATGTTTGATATTT+TGG | - | chr1.4:39488981-39489000 | MS.gene37080:intron | 20.0% |
| !!! | TTTTTTTGTTGTTATTTGGA+TGG | - | chr1.4:39489031-39489050 | MS.gene37080:intron | 20.0% |
| ! | AGCATTCCTTATAATATCTT+CGG | + | chr1.4:39490186-39490205 | None:intergenic | 25.0% |
| ! | ATGGTTCATGTATATAGAAA+AGG | + | chr1.4:39490709-39490728 | None:intergenic | 25.0% |
| ! | ATGTATTGAATTTCATTGCA+GGG | - | chr1.4:39490135-39490154 | MS.gene37080:intron | 25.0% |
| ! | ATTGGTTGAACAGTTAAATT+TGG | - | chr1.4:39488790-39488809 | MS.gene37080:intron | 25.0% |
| ! | GACACAAATCAAATACATTA+AGG | + | chr1.4:39490768-39490787 | None:intergenic | 25.0% |
| ! | GAGAAAGTAATATAAAAACC+TGG | + | chr1.4:39490520-39490539 | None:intergenic | 25.0% |
| ! | GAGTAACTTAACATAAAATG+TGG | + | chr1.4:39489987-39490006 | None:intergenic | 25.0% |
| ! | TAACTGTTCAACCAATTAAT+TGG | + | chr1.4:39488786-39488805 | None:intergenic | 25.0% |
| ! | TATGTATTGAATTTCATTGC+AGG | - | chr1.4:39490134-39490153 | MS.gene37080:intron | 25.0% |
| ! | TGGTTCATGTATATAGAAAA+GGG | + | chr1.4:39490708-39490727 | None:intergenic | 25.0% |
| ! | TTATAGATCAATTCAGTCTA+TGG | + | chr1.4:39490100-39490119 | None:intergenic | 25.0% |
| ! | TTCATGAGATATTATGTATG+AGG | + | chr1.4:39489559-39489578 | None:intergenic | 25.0% |
| ! | TTGGACATCATAAACTTAAA+GGG | + | chr1.4:39489916-39489935 | None:intergenic | 25.0% |
| ! | TTTATGATGTCCAAAAAAGT+TGG | - | chr1.4:39489922-39489941 | MS.gene37080:intron | 25.0% |
| ! | TTTGGACATCATAAACTTAA+AGG | + | chr1.4:39489917-39489936 | None:intergenic | 25.0% |
| !! | CAAATTGTTGTTATGAAACA+TGG | - | chr1.4:39490470-39490489 | MS.gene37080:intron | 25.0% |
| !! | CACCTTTAAAAATTTGTGAT+TGG | - | chr1.4:39489858-39489877 | MS.gene37080:intron | 25.0% |
| !! | TCATGTATTTTTCATATTCG+GGG | + | chr1.4:39489888-39489907 | None:intergenic | 25.0% |
| !! | TCTTATATAAAAGGTTTGCT+TGG | - | chr1.4:39489429-39489448 | MS.gene37080:intron | 25.0% |
| !! | TGGAAACTTCTAAATTTTGA+TGG | + | chr1.4:39491870-39491889 | None:intergenic | 25.0% |
| !! | TTTTTGTTAAACTCAGTATC+CGG | + | chr1.4:39489323-39489342 | None:intergenic | 25.0% |
| !!! | CTGCTTATTTTTTTAACAAC+AGG | - | chr1.4:39491632-39491651 | MS.gene37080:CDS | 25.0% |
| !!! | GACATATTGTTTTCTAAGAA+AGG | - | chr1.4:39488624-39488643 | MS.gene37080:CDS | 25.0% |
| !!! | GCTTATTTTTTTAACAACAG+GGG | - | chr1.4:39491634-39491653 | MS.gene37080:CDS | 25.0% |
| !!! | TTCATTTTGTCCTATTTCTA+TGG | - | chr1.4:39489957-39489976 | MS.gene37080:intron | 25.0% |
| !!! | TTTTTAAGTAAGAAGTGACT+TGG | + | chr1.4:39491098-39491117 | None:intergenic | 25.0% |
| AAAACTCTTGAACACATAGA+TGG | + | chr1.4:39491403-39491422 | None:intergenic | 30.0% | |
| AAATTCACTATGCACATCTT+TGG | - | chr1.4:39489491-39489510 | MS.gene37080:CDS | 30.0% | |
| AAGCAAAAACCAAACGATAA+AGG | + | chr1.4:39490579-39490598 | None:intergenic | 30.0% | |
| AAGGATTGACTATAATCCAA+GGG | + | chr1.4:39489297-39489316 | None:intergenic | 30.0% | |
| ACAACAATTTGTGAATCTTC+TGG | + | chr1.4:39490461-39490480 | None:intergenic | 30.0% | |
| AGGATTAATCATTGTGAATC+AGG | + | chr1.4:39490927-39490946 | None:intergenic | 30.0% | |
| CTATCTCCGAAGATATTATA+AGG | - | chr1.4:39490177-39490196 | MS.gene37080:intron | 30.0% | |
| GAACTTATCTCCTAAAACAA+AGG | + | chr1.4:39489796-39489815 | None:intergenic | 30.0% | |
| GAGATATAAAGATTTGCAGA+AGG | - | chr1.4:39491713-39491732 | MS.gene37080:CDS | 30.0% | |
| GAGATGATCATTAACAAACT+TGG | + | chr1.4:39488378-39488397 | None:intergenic | 30.0% | |
| GATCAGGTATCAAAATCTAT+AGG | - | chr1.4:39491280-39491299 | MS.gene37080:intron | 30.0% | |
| GTGGTTAATCATAGTGAATT+AGG | + | chr1.4:39490947-39490966 | None:intergenic | 30.0% | |
| TCAAGCTAATGAAGTAATTG+AGG | - | chr1.4:39488277-39488296 | MS.gene37080:CDS | 30.0% | |
| TTGAACATGAATTTCGTCTT+GGG | - | chr1.4:39490880-39490899 | MS.gene37080:intron | 30.0% | |
| TTGGATTATAGTCAATCCTT+GGG | - | chr1.4:39489297-39489316 | MS.gene37080:intron | 30.0% | |
| TTGTTATGAAACATGGAACA+TGG | - | chr1.4:39490477-39490496 | MS.gene37080:intron | 30.0% | |
| TTTATGTTGCCTTTATCGTT+TGG | - | chr1.4:39490567-39490586 | MS.gene37080:intron | 30.0% | |
| TTTGAACATGAATTTCGTCT+TGG | - | chr1.4:39490879-39490898 | MS.gene37080:intron | 30.0% | |
| TTTGTCATATTTGCATCTGA+CGG | - | chr1.4:39491439-39491458 | MS.gene37080:intron | 30.0% | |
| ! | ATTAGCTTGAACAATAGCAA+AGG | + | chr1.4:39488267-39488286 | None:intergenic | 30.0% |
| !! | GTTTTTGTTGGTGTTTATGA+TGG | - | chr1.4:39488332-39488351 | MS.gene37080:intron | 30.0% |
| !!! | ATAATTTTTTTCGTCCACCT+AGG | - | chr1.4:39491544-39491563 | MS.gene37080:intron | 30.0% |
| !!! | TTTACACAAGCCTTTGTTTT+AGG | - | chr1.4:39489783-39489802 | MS.gene37080:CDS | 30.0% |
| AAAACATCTTTAGACCGAGT+AGG | - | chr1.4:39488694-39488713 | MS.gene37080:CDS | 35.0% | |
| AAAACATTGCTTTCGTGACT+AGG | - | chr1.4:39488823-39488842 | MS.gene37080:intron | 35.0% | |
| AAAGGGTTTATTGACACAGT+TGG | - | chr1.4:39491843-39491862 | MS.gene37080:CDS | 35.0% | |
| AAATGAATGATAGCCAAAGG+GGG | - | chr1.4:39489643-39489662 | MS.gene37080:CDS | 35.0% | |
| AACGTCAAACATACAGTTCT+AGG | + | chr1.4:39491517-39491536 | None:intergenic | 35.0% | |
| AAGGGAGAAGTTGGAAAATT+TGG | - | chr1.4:39489464-39489483 | MS.gene37080:intron | 35.0% | |
| ACACTTCATATCGCTAATCT+TGG | - | chr1.4:39490317-39490336 | MS.gene37080:intron | 35.0% | |
| ACGTCAAACATACAGTTCTA+GGG | + | chr1.4:39491516-39491535 | None:intergenic | 35.0% | |
| AGAAGGTTGAAAAGGGAATT+CGG | - | chr1.4:39491730-39491749 | MS.gene37080:CDS | 35.0% | |
| AGACATAATTGTAGGATCCT+AGG | + | chr1.4:39491564-39491583 | None:intergenic | 35.0% | |
| AGATTTGCAGAAGGTTGAAA+AGG | - | chr1.4:39491722-39491741 | MS.gene37080:CDS | 35.0% | |
| AGGATTGACTATAATCCAAG+GGG | + | chr1.4:39489296-39489315 | None:intergenic | 35.0% | |
| ATGCATAACTACGGGAAATT+TGG | - | chr1.4:39489516-39489535 | MS.gene37080:CDS | 35.0% | |
| ATGTGGCAATCCATAGAAAT+AGG | + | chr1.4:39489970-39489989 | None:intergenic | 35.0% | |
| CAAGGATTGACTATAATCCA+AGG | + | chr1.4:39489298-39489317 | None:intergenic | 35.0% | |
| CTTGGATTATAGTCAATCCT+TGG | - | chr1.4:39489296-39489315 | MS.gene37080:intron | 35.0% | |
| GAAATGAATGATAGCCAAAG+GGG | - | chr1.4:39489642-39489661 | MS.gene37080:CDS | 35.0% | |
| GATTTGCAGAAGGTTGAAAA+GGG | - | chr1.4:39491723-39491742 | MS.gene37080:CDS | 35.0% | |
| GGAAATGAATGATAGCCAAA+GGG | - | chr1.4:39489641-39489660 | MS.gene37080:CDS | 35.0% | |
| GTGTTTCAACTTCCATTACA+TGG | - | chr1.4:39490662-39490681 | MS.gene37080:intron | 35.0% | |
| TAGGAGATGCATATTTGAAG+CGG | - | chr1.4:39491299-39491318 | MS.gene37080:intron | 35.0% | |
| TCTAAGAAAGGCTAGTATGA+AGG | - | chr1.4:39488636-39488655 | MS.gene37080:CDS | 35.0% | |
| TCTTTGGCTATGCATAACTA+CGG | - | chr1.4:39489507-39489526 | MS.gene37080:CDS | 35.0% | |
| TGATGAAATGCATGTTGTGT+TGG | - | chr1.4:39491203-39491222 | MS.gene37080:intron | 35.0% | |
| TGGAAATGAATGATAGCCAA+AGG | - | chr1.4:39489640-39489659 | MS.gene37080:CDS | 35.0% | |
| TGTGTCAATAAACCCTTTGA+TGG | + | chr1.4:39491841-39491860 | None:intergenic | 35.0% | |
| TGTTCAACCAATTAATTGGC+CGG | + | chr1.4:39488782-39488801 | None:intergenic | 35.0% | |
| TTAACAAACTTGGAAGCTTC+AGG | + | chr1.4:39488368-39488387 | None:intergenic | 35.0% | |
| TTTCTCTATCACGCTATCTA+AGG | - | chr1.4:39488445-39488464 | MS.gene37080:intron | 35.0% | |
| ! | AAACCCTTTGATGGATAACT+CGG | + | chr1.4:39491832-39491851 | None:intergenic | 35.0% |
| ! | CATCCTTCTTTTGCATTTCA+TGG | + | chr1.4:39491800-39491819 | None:intergenic | 35.0% |
| !! | GATCATAGTCAAGTTGAAAC+TGG | - | chr1.4:39488299-39488318 | MS.gene37080:CDS | 35.0% |
| !!! | CACAGATATGCCAACTTTTT+TGG | + | chr1.4:39489935-39489954 | None:intergenic | 35.0% |
| AATGAATGATAGCCAAAGGG+GGG | - | chr1.4:39489644-39489663 | MS.gene37080:CDS | 40.0% | |
| ACAAAACATGTGTCAGAGAC+TGG | + | chr1.4:39488476-39488495 | None:intergenic | 40.0% | |
| ACGCGCTAAGACATAATTGT+AGG | + | chr1.4:39491572-39491591 | None:intergenic | 40.0% | |
| ACTGTATAGGCACAACACAA+TGG | + | chr1.4:39490629-39490648 | None:intergenic | 40.0% | |
| ATCTGTGTCTCATACATGTC+TGG | - | chr1.4:39488563-39488582 | MS.gene37080:CDS | 40.0% | |
| ATGGGTTCATGTTGTCTTGT+CGG | - | chr1.4:39490278-39490297 | MS.gene37080:intron | 40.0% | |
| ATTATAGTCAATCCTTGGGC+CGG | - | chr1.4:39489301-39489320 | MS.gene37080:intron | 40.0% | |
| CATAATTGTAGGATCCTAGG+TGG | + | chr1.4:39491561-39491580 | None:intergenic | 40.0% | |
| CATCTGAAGATGCTCTTGTT+TGG | - | chr1.4:39488204-39488223 | MS.gene37080:CDS | 40.0% | |
| CCAAATGCAGCTACAAACTA+TGG | + | chr1.4:39490728-39490747 | None:intergenic | 40.0% | |
| CGACCATGAAATGCAAAAGA+AGG | - | chr1.4:39491794-39491813 | MS.gene37080:CDS | 40.0% | |
| CTTTGGCTATGCATAACTAC+GGG | - | chr1.4:39489508-39489527 | MS.gene37080:CDS | 40.0% | |
| GAAGGATCAAATGAGAACTC+TGG | + | chr1.4:39491325-39491344 | None:intergenic | 40.0% | |
| GATCAAACCGGCCAATTAAT+TGG | - | chr1.4:39488772-39488791 | MS.gene37080:intron | 40.0% | |
| GATTTGTCATGTGTTCCCAA+AGG | + | chr1.4:39491465-39491484 | None:intergenic | 40.0% | |
| GCAGGGATTGCTAAAGAAAA+TGG | - | chr1.4:39490152-39490171 | MS.gene37080:intron | 40.0% | |
| GTCCATCAAAAATGGCATCA+GGG | + | chr1.4:39489209-39489228 | None:intergenic | 40.0% | |
| TTCCCGAGTTATCCATCAAA+GGG | - | chr1.4:39491826-39491845 | MS.gene37080:CDS | 40.0% | |
| TTCTTCTTCACACCACAACT+GGG | - | chr1.4:39491258-39491277 | MS.gene37080:intron | 40.0% | |
| TTGGGAACACATGACAAATC+AGG | - | chr1.4:39491465-39491484 | MS.gene37080:intron | 40.0% | |
| TTTCCACGATGATATCACAG+TGG | - | chr1.4:39491758-39491777 | MS.gene37080:CDS | 40.0% | |
| TTTCTTCTTCACACCACAAC+TGG | - | chr1.4:39491257-39491276 | MS.gene37080:intron | 40.0% | |
| TTTGCAGGCATTATGCTCTT+TGG | + | chr1.4:39490405-39490424 | None:intergenic | 40.0% | |
| ! | AACCCTTTGATGGATAACTC+GGG | + | chr1.4:39491831-39491850 | None:intergenic | 40.0% |
| ! | CCATAGTTTGTAGCTGCATT+TGG | - | chr1.4:39490725-39490744 | MS.gene37080:intron | 40.0% |
| ! | GTTGGTGTTTATGATGGTCA+TGG | - | chr1.4:39488338-39488357 | MS.gene37080:intron | 40.0% |
| !! | AAGGAATGCTGTTTCTGCTA+CGG | - | chr1.4:39490196-39490215 | MS.gene37080:intron | 40.0% |
| !! | AGCTATGCTCTGGCTTTAAA+TGG | - | chr1.4:39489242-39489261 | MS.gene37080:intron | 40.0% |
| !! | GCTATGCTCTGGCTTTAAAT+GGG | - | chr1.4:39489243-39489262 | MS.gene37080:intron | 40.0% |
| !! | TGTCTGTTTCTGTGCTTCAT+AGG | - | chr1.4:39488594-39488613 | MS.gene37080:CDS | 40.0% |
| !! | TTGTCGGTGTTATCTGGAAA+GGG | - | chr1.4:39490294-39490313 | MS.gene37080:intron | 40.0% |
| !!! | GGTTCTGATGCTGTTTTTGT+TGG | - | chr1.4:39488320-39488339 | MS.gene37080:CDS | 40.0% |
| AAAGCCACTGATAGCAGCAA+TGG | - | chr1.4:39490259-39490278 | MS.gene37080:intron | 45.0% | |
| AAGCCACTGATAGCAGCAAT+GGG | - | chr1.4:39490260-39490279 | MS.gene37080:intron | 45.0% | |
| ACTCTTGTTCGACGAAGCTT+TGG | - | chr1.4:39490233-39490252 | MS.gene37080:intron | 45.0% | |
| AGAGCATAATGCCTGCAAAG+AGG | - | chr1.4:39490406-39490425 | MS.gene37080:intron | 45.0% | |
| ATTTGCATCTGACGGCCTTT+GGG | - | chr1.4:39491447-39491466 | MS.gene37080:intron | 45.0% | |
| CAACCACTGTGATATCATCG+TGG | + | chr1.4:39491764-39491783 | None:intergenic | 45.0% | |
| CATGGAACATGGCGCATTAA+AGG | - | chr1.4:39490488-39490507 | MS.gene37080:intron | 45.0% | |
| CATTTGATCCTTCATTCCCG+CGG | - | chr1.4:39491332-39491351 | MS.gene37080:intron | 45.0% | |
| CCGAGTAGGTTTATGAGTCA+CGG | - | chr1.4:39488708-39488727 | MS.gene37080:intron | 45.0% | |
| CCGTGACTCATAAACCTACT+CGG | + | chr1.4:39488711-39488730 | None:intergenic | 45.0% | |
| GAAGCACAGAAACAGACACA+CGG | + | chr1.4:39488592-39488611 | None:intergenic | 45.0% | |
| GAATGAGGCAGCAAGGAAAA+GGG | - | chr1.4:39491686-39491705 | MS.gene37080:CDS | 45.0% | |
| GACCTTGAGAAACACTCTTG+TGG | - | chr1.4:39488233-39488252 | MS.gene37080:CDS | 45.0% | |
| GAGTGCAAGAAGACTTCTTC+AGG | - | chr1.4:39491656-39491675 | MS.gene37080:CDS | 45.0% | |
| GCTACACTACGTTTAAGCAG+TGG | + | chr1.4:39490966-39490985 | None:intergenic | 45.0% | |
| GGTCCATCAAAAATGGCATC+AGG | + | chr1.4:39489210-39489229 | None:intergenic | 45.0% | |
| GGTGTTTATGATGGTCATGG+TGG | - | chr1.4:39488341-39488360 | MS.gene37080:intron | 45.0% | |
| GTTATTTGGATGGCCCTTTG+TGG | - | chr1.4:39489041-39489060 | MS.gene37080:intron | 45.0% | |
| GTTCCCGAGTTATCCATCAA+AGG | - | chr1.4:39491825-39491844 | MS.gene37080:CDS | 45.0% | |
| TATTTGCATCTGACGGCCTT+TGG | - | chr1.4:39491446-39491465 | MS.gene37080:intron | 45.0% | |
| TCTTCTGATCTCCTCTTTGC+AGG | + | chr1.4:39490420-39490439 | None:intergenic | 45.0% | |
| TGAATGAGGCAGCAAGGAAA+AGG | - | chr1.4:39491685-39491704 | MS.gene37080:CDS | 45.0% | |
| TTGATACCTGATCCCAGTTG+TGG | + | chr1.4:39491273-39491292 | None:intergenic | 45.0% | |
| TTTAAATGGGCCTCTGCAAG+TGG | - | chr1.4:39489256-39489275 | MS.gene37080:intron | 45.0% | |
| ! | AGGTTTGCTTGGTTGTGTAG+TGG | - | chr1.4:39489440-39489459 | MS.gene37080:intron | 45.0% |
| ! | CGGACTTGGTCCATCAAAAA+TGG | + | chr1.4:39489217-39489236 | None:intergenic | 45.0% |
| ! | GATGGTTCTGCTGATAACAC+CGG | + | chr1.4:39491385-39491404 | None:intergenic | 45.0% |
| ! | GCTTGGTTGTGTAGTGGAAA+GGG | - | chr1.4:39489446-39489465 | MS.gene37080:intron | 45.0% |
| ! | TCTTCAGGCTGCTTTGAATG+AGG | - | chr1.4:39491671-39491690 | MS.gene37080:CDS | 45.0% |
| ! | TGCTTGGTTGTGTAGTGGAA+AGG | - | chr1.4:39489445-39489464 | MS.gene37080:intron | 45.0% |
| ! | TGTAGTGGAAAGGGAGAAGT+TGG | - | chr1.4:39489455-39489474 | MS.gene37080:intron | 45.0% |
| !! | AGCATAGCTTTGTACGGACT+TGG | + | chr1.4:39489231-39489250 | None:intergenic | 45.0% |
| !! | AGCCAGAGCATAGCTTTGTA+CGG | + | chr1.4:39489237-39489256 | None:intergenic | 45.0% |
| !! | CACCACAAGAGTGTTTCTCA+AGG | + | chr1.4:39488238-39488257 | None:intergenic | 45.0% |
| !! | CTTGTCGGTGTTATCTGGAA+AGG | - | chr1.4:39490293-39490312 | MS.gene37080:intron | 45.0% |
| !! | GTTGTCTTGTCGGTGTTATC+TGG | - | chr1.4:39490288-39490307 | MS.gene37080:intron | 45.0% |
| !!! | CTCCCTGATGCCATTTTTGA+TGG | - | chr1.4:39489204-39489223 | MS.gene37080:intron | 45.0% |
| !!! | TTGTTTTTTATTAAATAATA+TGG | - | chr1.4:39488907-39488926 | MS.gene37080:intron | 5.0% |
| !!! | TTTATTTTATCTTATATAAA+AGG | - | chr1.4:39489420-39489439 | MS.gene37080:intron | 5.0% |
| ATCACACCATCCACTTGCAG+AGG | + | chr1.4:39489269-39489288 | None:intergenic | 50.0% | |
| ATGATAGCCAAAGGGGGGAT+TGG | - | chr1.4:39489649-39489668 | MS.gene37080:CDS | 50.0% | |
| CTGCAAGTGGATGGTGTGAT+TGG | - | chr1.4:39489269-39489288 | MS.gene37080:intron | 50.0% | |
| GAACCCATTGCTGCTATCAG+TGG | + | chr1.4:39490266-39490285 | None:intergenic | 50.0% | |
| GATGTTACCAATCCCCCCTT+TGG | + | chr1.4:39489659-39489678 | None:intergenic | 50.0% | |
| GGAGATTCTCGTGCTGTGAT+CGG | - | chr1.4:39490338-39490357 | MS.gene37080:intron | 50.0% | |
| GTCCGTACAAAGCTATGCTC+TGG | - | chr1.4:39489232-39489251 | MS.gene37080:intron | 50.0% | |
| GTTCTGCTGATAACACCGGT+CGG | + | chr1.4:39491381-39491400 | None:intergenic | 50.0% | |
| TAAACTCAGTATCCGGCCCA+AGG | + | chr1.4:39489316-39489335 | None:intergenic | 50.0% | |
| TTCACACCACAACTGGGATC+AGG | - | chr1.4:39491264-39491283 | MS.gene37080:intron | 50.0% | |
| ! | ATACGTGCATAGCGTCGAAC+TGG | + | chr1.4:39488146-39488165 | None:intergenic | 50.0% |
| ! | CTGCTTTGAATGAGGCAGCA+AGG | - | chr1.4:39491679-39491698 | MS.gene37080:CDS | 50.0% |
| !! | GCGCATTAAAGGCATCATCC+AGG | - | chr1.4:39490499-39490518 | MS.gene37080:intron | 50.0% |
| !! | GCTGTTTCTGCTACGGAAGA+TGG | - | chr1.4:39490203-39490222 | MS.gene37080:intron | 50.0% |
| AAGTGGAACCGCGGGAATGA+AGG | + | chr1.4:39491343-39491362 | None:intergenic | 55.0% | |
| AATGGGCCTCTGCAAGTGGA+TGG | - | chr1.4:39489260-39489279 | MS.gene37080:intron | 55.0% | |
| CAGCCAGCCTGATCCACAAA+GGG | + | chr1.4:39489057-39489076 | None:intergenic | 55.0% | |
| GATAACACCGGTCGGCTGAT+AGG | + | chr1.4:39491373-39491392 | None:intergenic | 55.0% | |
| GATGGTGTGATTGGACCCCT+TGG | - | chr1.4:39489278-39489297 | MS.gene37080:intron | 55.0% | |
| GGCTGATAGGATCAGGCAAG+TGG | + | chr1.4:39491360-39491379 | None:intergenic | 55.0% | |
| TGGATGGCCCTTTGTGGATC+AGG | - | chr1.4:39489047-39489066 | MS.gene37080:intron | 55.0% | |
| ! | CGTGCTGTGATCGGTTCAAC+TGG | - | chr1.4:39490347-39490366 | MS.gene37080:intron | 55.0% |
| !! | GGCTGGCTGGTGGATTTGTT+TGG | - | chr1.4:39489068-39489087 | MS.gene37080:intron | 55.0% |
| ACCGGTCGGCTGATAGGATC+AGG | + | chr1.4:39491367-39491386 | None:intergenic | 60.0% | |
| CCAGCCAGCCTGATCCACAA+AGG | + | chr1.4:39489058-39489077 | None:intergenic | 60.0% | |
| CCTTTGTGGATCAGGCTGGC+TGG | - | chr1.4:39489055-39489074 | MS.gene37080:intron | 60.0% | |
| GATCAGGCAAGTGGAACCGC+GGG | + | chr1.4:39491351-39491370 | None:intergenic | 60.0% | |
| GCCTGATCCTATCAGCCGAC+CGG | - | chr1.4:39491363-39491382 | MS.gene37080:intron | 60.0% | |
| GGATCAGGCAAGTGGAACCG+CGG | + | chr1.4:39491352-39491371 | None:intergenic | 60.0% | |
| TGGCCCTTTGTGGATCAGGC+TGG | - | chr1.4:39489051-39489070 | MS.gene37080:intron | 60.0% | |
| ! | TTGTGGATCAGGCTGGCTGG+TGG | - | chr1.4:39489058-39489077 | MS.gene37080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 39488101 | 39491902 | 39488101 | ID=MS.gene37080 |
| chr1.4 | mRNA | 39488101 | 39491902 | 39488101 | ID=MS.gene37080.t1;Parent=MS.gene37080 |
| chr1.4 | exon | 39491590 | 39491902 | 39491590 | ID=MS.gene37080.t1.exon1;Parent=MS.gene37080.t1 |
| chr1.4 | CDS | 39491590 | 39491902 | 39491590 | ID=cds.MS.gene37080.t1;Parent=MS.gene37080.t1 |
| chr1.4 | exon | 39489483 | 39489847 | 39489483 | ID=MS.gene37080.t1.exon2;Parent=MS.gene37080.t1 |
| chr1.4 | CDS | 39489483 | 39489847 | 39489483 | ID=cds.MS.gene37080.t1;Parent=MS.gene37080.t1 |
| chr1.4 | exon | 39488481 | 39488717 | 39488481 | ID=MS.gene37080.t1.exon3;Parent=MS.gene37080.t1 |
| chr1.4 | CDS | 39488481 | 39488717 | 39488481 | ID=cds.MS.gene37080.t1;Parent=MS.gene37080.t1 |
| chr1.4 | exon | 39488101 | 39488349 | 39488101 | ID=MS.gene37080.t1.exon4;Parent=MS.gene37080.t1 |
| chr1.4 | CDS | 39488101 | 39488349 | 39488101 | ID=cds.MS.gene37080.t1;Parent=MS.gene37080.t1 |
| Gene Sequence |
| Protein sequence |
