AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28886

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28886.t1 MTR_8g074930 100.000 387 0 0 1 387 6 392 0.0 801
MS.gene28886.t1 MTR_1g112840 74.674 383 95 1 1 381 6 388 0.0 591
MS.gene28886.t1 MTR_7g081020 75.711 387 90 2 1 384 1 386 0.0 590
MS.gene28886.t1 MTR_8g074930 100.000 280 0 0 108 387 1 280 0.0 572
MS.gene28886.t1 MTR_1g116260 66.033 368 119 1 3 370 9 370 2.45e-180 506
MS.gene28886.t1 MTR_7g081020 77.303 304 65 2 1 301 1 303 5.55e-169 475
MS.gene28886.t1 MTR_1g067210 63.295 346 126 1 25 370 27 371 5.28e-163 462
MS.gene28886.t1 MTR_7g100240 62.155 362 135 2 6 367 4 363 4.10e-160 454
MS.gene28886.t1 MTR_2g033910 58.556 374 141 5 1 369 6 370 8.16e-159 451
MS.gene28886.t1 MTR_0015s0140 49.465 374 170 4 3 368 8 370 2.17e-133 387
MS.gene28886.t1 MTR_1g106855 53.714 350 142 3 4 351 9 340 1.37e-130 380
MS.gene28886.t1 MTR_0015s0140 51.071 280 134 2 89 368 40 316 3.65e-101 303
MS.gene28886.t1 MTR_1g106855 50.993 302 128 3 4 303 9 292 3.98e-101 301
MS.gene28886.t1 MTR_3g032660 45.312 320 160 5 36 349 37 347 1.97e-96 294
MS.gene28886.t1 MTR_3g032700 45.312 320 160 5 36 349 37 347 6.18e-96 293
MS.gene28886.t1 MTR_7g090550 44.880 332 166 6 32 355 35 357 2.57e-90 279
MS.gene28886.t1 MTR_7g090530 45.342 322 159 6 35 349 37 348 3.00e-90 279
MS.gene28886.t1 MTR_3g032590 43.191 257 138 4 99 349 99 353 5.07e-69 224
MS.gene28886.t1 MTR_4g113480 36.232 345 193 7 25 363 34 357 3.61e-64 214
MS.gene28886.t1 MTR_4g113345 33.129 326 177 10 28 349 22 310 1.47e-44 157
MS.gene28886.t1 MTR_7g060770 31.525 295 173 6 74 349 263 547 7.75e-44 160
MS.gene28886.t1 MTR_4g119830 34.749 259 154 5 110 358 245 498 3.68e-41 152
MS.gene28886.t1 MTR_4g076560 33.333 294 174 7 73 352 201 486 9.85e-41 150
MS.gene28886.t1 MTR_4g063905 31.786 280 149 5 110 352 425 699 9.08e-37 142
MS.gene28886.t1 MTR_7g090540 39.303 201 99 5 160 355 5 187 1.34e-34 129
MS.gene28886.t1 MTR_4g098650 30.100 299 150 5 108 352 478 771 1.11e-32 130
MS.gene28886.t1 MTR_4g113210 32.453 265 145 8 27 282 18 257 2.80e-32 122
MS.gene28886.t1 MTR_1g085530 35.955 178 105 3 179 352 715 887 2.13e-26 111
MS.gene28886.t1 MTR_3g464650 29.137 278 139 9 73 348 93 314 1.05e-24 103
MS.gene28886.t1 MTR_1g115570 31.818 242 115 8 74 311 126 321 4.21e-24 102
MS.gene28886.t1 MTR_3g464700 31.081 222 111 7 74 294 118 298 5.78e-23 99.0
MS.gene28886.t1 MTR_3g091060 29.730 222 111 6 76 294 127 306 7.17e-23 99.0
MS.gene28886.t1 MTR_1g014640 30.000 290 137 10 76 361 110 337 2.72e-22 97.1
MS.gene28886.t1 MTR_1g013400 30.000 290 137 10 76 361 110 337 2.72e-22 97.1
MS.gene28886.t1 MTR_5g071550 29.464 224 116 6 74 296 154 336 5.56e-22 96.7
MS.gene28886.t1 MTR_2g078760 28.179 291 133 10 66 348 31 253 9.56e-21 90.9
MS.gene28886.t1 MTR_3g105730 29.197 274 129 9 76 346 67 278 1.45e-20 91.3
MS.gene28886.t1 MTR_2g078760 28.179 291 133 10 66 348 110 332 1.60e-20 92.0
MS.gene28886.t1 MTR_7g025640 32.110 218 109 7 138 351 7 189 1.65e-20 89.0
MS.gene28886.t1 MTR_3g105730 29.197 274 129 9 76 346 45 256 1.79e-20 90.9
MS.gene28886.t1 MTR_2g008850 29.134 254 127 9 74 322 19 224 1.16e-19 87.4
MS.gene28886.t1 MTR_4g094208 27.309 249 140 6 74 321 61 269 2.46e-19 87.4
MS.gene28886.t1 MTR_2g008850 29.134 254 127 9 74 322 65 270 7.51e-19 86.3
MS.gene28886.t1 MTR_5g024340 27.018 285 140 10 70 346 119 343 7.60e-19 87.8
MS.gene28886.t1 MTR_2g033000 26.389 288 149 8 73 350 99 333 2.46e-18 85.9
MS.gene28886.t1 MTR_1g028300 29.643 280 155 7 19 296 92 331 6.86e-18 84.7
MS.gene28886.t1 MTR_4g116420 26.042 288 145 10 73 350 123 352 1.44e-17 84.0
MS.gene28886.t1 MTR_2g040500 27.213 305 156 10 74 348 267 535 2.34e-17 84.0
MS.gene28886.t1 MTR_3g074610 26.214 309 159 10 41 346 37 279 2.67e-17 81.6
MS.gene28886.t1 MTR_5g071550 26.786 224 122 6 73 295 153 335 3.04e-17 82.8
MS.gene28886.t1 MTR_4g094542 25.843 267 151 9 47 311 127 348 4.83e-17 82.0
MS.gene28886.t1 MTR_4g125810 28.755 233 126 6 70 296 249 447 6.78e-17 82.4
MS.gene28886.t1 MTR_3g068200 26.948 308 154 9 65 348 115 375 1.02e-16 81.3
MS.gene28886.t1 MTR_1g014190 24.658 292 134 11 55 296 33 288 1.06e-16 81.3
MS.gene28886.t1 MTR_1g014190 24.658 292 134 11 55 296 71 326 2.55e-16 80.1
MS.gene28886.t1 MTR_3g107880 26.000 300 157 13 69 359 59 302 4.61e-16 79.0
MS.gene28886.t1 MTR_3g107880 26.000 300 157 13 69 359 116 359 5.08e-16 79.3
MS.gene28886.t1 MTR_3g107880 26.000 300 157 13 69 359 117 360 5.25e-16 79.3
MS.gene28886.t1 MTR_7g112490 30.667 225 104 10 142 354 183 367 5.94e-16 79.0
MS.gene28886.t1 MTR_8g463130 28.112 249 123 9 66 306 59 259 6.43e-16 77.8
MS.gene28886.t1 MTR_8g463130 28.112 249 123 9 66 306 31 231 6.70e-16 77.4
MS.gene28886.t1 MTR_7g112490 30.667 225 104 10 142 354 201 385 7.19e-16 79.0
MS.gene28886.t1 MTR_7g093240 32.895 152 60 5 153 299 4 118 1.02e-15 73.6
MS.gene28886.t1 MTR_5g080680 28.033 239 115 5 74 296 132 329 2.09e-15 77.4
MS.gene28886.t1 MTR_1g050520 25.899 278 148 9 76 348 420 644 3.83e-15 77.4
MS.gene28886.t1 MTR_4g007440 24.277 346 174 9 73 374 51 352 5.68e-15 75.9
MS.gene28886.t1 MTR_5g063940 26.909 275 138 10 74 346 19 232 7.58e-15 73.9
MS.gene28886.t1 MTR_2g078760 29.075 227 105 9 66 284 110 288 9.36e-15 74.7
MS.gene28886.t1 MTR_5g063940 26.909 275 138 10 74 346 66 279 1.60e-14 73.6
MS.gene28886.t1 MTR_7g021530 27.439 328 161 14 74 360 129 420 2.03e-14 74.7
MS.gene28886.t1 MTR_7g021530 27.439 328 161 14 74 360 88 379 2.09e-14 74.7
MS.gene28886.t1 MTR_1g086350 25.436 287 153 8 73 350 101 335 2.24e-14 74.3
MS.gene28886.t1 MTR_1g086350 25.524 286 152 8 74 350 118 351 2.26e-14 74.3
MS.gene28886.t1 MTR_7g021530 27.586 319 154 14 74 351 38 320 3.40e-14 73.6
MS.gene28886.t1 MTR_4g123080 28.889 270 131 15 63 312 83 311 6.80e-14 72.8
MS.gene28886.t1 MTR_4g123080 27.308 260 148 9 63 312 101 329 9.19e-14 72.4
MS.gene28886.t1 MTR_1g015110 27.615 239 119 7 74 296 290 490 1.03e-13 72.8
MS.gene28886.t1 MTR_8g017240 32.203 177 85 7 152 319 174 324 1.88e-13 71.6
MS.gene28886.t1 MTR_1g086350 25.088 283 151 8 77 350 19 249 2.30e-13 70.5
MS.gene28886.t1 MTR_4g037470 26.087 253 138 10 111 356 168 378 5.40e-13 70.5
MS.gene28886.t1 MTR_4g037470 26.087 253 138 10 111 356 177 387 6.14e-13 70.5
MS.gene28886.t1 MTR_3g105880 24.830 294 155 9 55 308 33 300 8.37e-13 68.9
MS.gene28886.t1 MTR_6g081850 24.490 294 149 9 77 351 82 321 9.68e-13 68.9
MS.gene28886.t1 MTR_2g090190 27.969 261 139 10 104 357 154 372 2.24e-12 68.6
MS.gene28886.t1 MTR_3g105880 24.911 281 145 9 55 295 33 287 2.36e-12 68.2
MS.gene28886.t1 MTR_2g435550 31.364 220 100 11 142 350 176 355 6.30e-12 66.6
MS.gene28886.t1 MTR_2g435550 31.364 220 100 11 142 350 162 341 6.59e-12 66.6
MS.gene28886.t1 MTR_5g009370 28.696 230 122 7 74 297 87 280 7.70e-12 66.2
MS.gene28886.t1 MTR_7g080170 27.599 279 146 14 110 371 170 409 2.29e-11 65.5
MS.gene28886.t1 MTR_7g080170 27.599 279 146 14 110 371 62 301 3.41e-11 64.7
MS.gene28886.t1 MTR_3g491830 23.887 247 148 9 73 298 88 315 4.36e-11 64.3
MS.gene28886.t1 MTR_4g120410 28.877 187 100 7 142 319 175 337 5.87e-11 63.9
MS.gene28886.t1 MTR_4g013295 27.556 225 107 9 152 368 176 352 6.23e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28886.t1 AT3G51370 77.128 376 83 1 1 376 6 378 0.0 605
MS.gene28886.t1 AT3G51370 77.128 376 83 1 1 376 6 378 0.0 605
MS.gene28886.t1 AT4G38520 70.984 386 110 1 1 384 6 391 0.0 585
MS.gene28886.t1 AT4G38520 70.984 386 110 1 1 384 6 391 0.0 585
MS.gene28886.t1 AT5G66080 73.879 379 96 3 1 376 6 384 0.0 584
MS.gene28886.t1 AT3G12620 65.054 372 127 2 1 370 8 378 0.0 510
MS.gene28886.t1 AT3G12620 65.054 372 127 2 1 370 8 378 0.0 510
MS.gene28886.t1 AT3G55050 60.428 374 137 3 3 371 9 376 2.58e-171 483
MS.gene28886.t1 AT3G55050 60.428 374 137 3 3 371 9 376 2.58e-171 483
MS.gene28886.t1 AT3G51370 73.986 296 73 2 81 376 2 293 3.40e-162 457
MS.gene28886.t1 AT5G66080 75.362 276 68 0 101 376 5 280 7.67e-158 445
MS.gene28886.t1 AT5G02760 61.186 371 139 3 7 377 5 370 1.83e-157 447
MS.gene28886.t1 AT3G17090 56.936 346 137 4 27 369 45 381 9.62e-145 416
MS.gene28886.t1 AT5G06750 55.652 345 141 3 27 368 43 378 1.34e-134 390
MS.gene28886.t1 AT5G06750 55.652 345 141 3 27 368 43 378 1.34e-134 390
MS.gene28886.t1 AT4G33920 53.582 349 144 3 25 363 20 360 2.48e-132 384
MS.gene28886.t1 AT3G17090 55.000 280 116 3 27 305 45 315 5.37e-112 330
MS.gene28886.t1 AT4G33920 53.261 276 119 2 98 363 2 277 1.83e-103 308
MS.gene28886.t1 AT5G06750 51.987 302 135 4 70 368 2 296 4.67e-102 305
MS.gene28886.t1 AT4G33920 53.441 247 105 2 127 363 1 247 6.90e-92 277
MS.gene28886.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28886.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28886.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28886.t1 AT3G09400 32.616 279 147 7 105 352 377 645 1.42e-39 149
MS.gene28886.t1 AT5G02400 32.979 282 149 6 102 349 391 666 4.79e-39 148
MS.gene28886.t1 AT1G07630 31.707 287 153 6 103 352 377 657 3.51e-37 142
MS.gene28886.t1 AT2G35350 29.508 305 164 5 99 357 480 779 8.98e-36 139
MS.gene28886.t1 AT2G28890 30.714 280 152 5 110 352 375 649 1.32e-34 135
MS.gene28886.t1 AT3G16560 29.787 282 155 6 74 318 175 450 9.01e-34 130
MS.gene28886.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28886.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28886.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28886.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28886.t1 AT3G09400 30.797 276 145 9 105 348 377 638 2.45e-30 123
MS.gene28886.t1 AT1G07160 30.208 288 146 8 63 348 142 376 9.15e-28 113
MS.gene28886.t1 AT2G40180 29.452 292 144 11 67 352 154 389 7.42e-26 107
MS.gene28886.t1 AT1G67820 31.321 265 128 9 38 295 80 297 8.18e-26 108
MS.gene28886.t1 AT1G67820 31.321 265 128 9 38 295 116 333 1.13e-25 108
MS.gene28886.t1 AT2G30020 30.108 279 131 9 76 348 172 392 2.49e-24 103
MS.gene28886.t1 AT4G31750 29.661 236 125 6 76 309 66 262 1.97e-22 97.1
MS.gene28886.t1 AT4G31750 29.536 237 126 6 76 310 66 263 2.20e-22 96.7
MS.gene28886.t1 AT4G31750 29.536 237 126 6 76 310 66 263 2.20e-22 96.7
MS.gene28886.t1 AT1G43900 31.200 250 117 11 68 309 148 350 6.43e-22 96.7
MS.gene28886.t1 AT5G53140 27.801 241 128 7 76 312 134 332 2.40e-21 95.5
MS.gene28886.t1 AT5G53140 27.801 241 128 7 76 312 134 332 2.40e-21 95.5
MS.gene28886.t1 AT5G10740 29.218 243 126 7 74 312 64 264 4.85e-21 93.6
MS.gene28886.t1 AT5G10740 29.218 243 126 7 74 312 64 264 4.85e-21 93.6
MS.gene28886.t1 AT2G33700 29.682 283 130 11 72 346 121 342 1.90e-20 92.4
MS.gene28886.t1 AT5G24940 29.098 244 125 8 74 312 64 264 6.20e-20 91.7
MS.gene28886.t1 AT4G28400 29.600 250 126 11 74 317 45 250 2.86e-19 87.0
MS.gene28886.t1 AT4G28400 29.960 247 123 11 77 317 70 272 4.70e-19 87.0
MS.gene28886.t1 AT2G25620 26.641 259 149 8 67 320 122 344 1.63e-18 86.7
MS.gene28886.t1 AT2G25620 26.641 259 149 8 67 320 122 344 1.63e-18 86.7
MS.gene28886.t1 AT2G20630 28.854 253 129 10 66 312 56 263 2.07e-18 85.1
MS.gene28886.t1 AT2G20630 28.854 253 129 10 66 312 56 263 2.58e-18 84.7
MS.gene28886.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28886.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28886.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28886.t1 AT4G08260 27.574 272 110 10 76 346 21 206 8.81e-18 81.6
MS.gene28886.t1 AT4G26080 27.526 287 160 9 74 348 172 422 1.09e-17 84.7
MS.gene28886.t1 AT1G07430 28.163 245 108 6 74 296 157 355 3.94e-17 83.2
MS.gene28886.t1 AT3G51470 27.273 286 133 11 72 346 104 325 2.92e-16 79.7
MS.gene28886.t1 AT5G26010 28.814 295 161 10 71 350 66 326 3.65e-16 79.3
MS.gene28886.t1 AT3G51470 27.273 286 133 11 72 346 60 281 4.14e-16 79.0
MS.gene28886.t1 AT5G57050 27.622 286 162 9 74 348 120 371 5.08e-16 79.3
MS.gene28886.t1 AT5G59220 29.832 238 110 7 74 296 148 343 5.27e-16 79.3
MS.gene28886.t1 AT5G57050 27.622 286 162 9 74 348 160 411 5.42e-16 79.7
MS.gene28886.t1 AT1G78200 27.273 253 127 9 76 317 21 227 7.95e-16 76.6
MS.gene28886.t1 AT1G78200 27.273 253 127 9 76 317 21 227 7.95e-16 76.6
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 202 406 1.57e-15 78.6
MS.gene28886.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28886.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28886.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 206 410 1.71e-15 78.2
MS.gene28886.t1 AT3G62260 27.381 252 136 8 74 312 27 244 1.92e-15 76.6
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28886.t1 AT1G48040 28.070 285 148 11 74 350 116 351 2.45e-15 77.4
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 136 340 2.92e-15 77.4
MS.gene28886.t1 AT1G79630 30.894 246 114 13 128 358 136 340 2.92e-15 77.4
MS.gene28886.t1 AT2G25070 25.418 299 151 13 55 311 33 301 3.21e-15 76.6
MS.gene28886.t1 AT2G25070 25.418 299 151 13 55 311 33 301 3.21e-15 76.6
MS.gene28886.t1 AT3G62260 27.888 251 136 8 74 312 116 333 3.23e-15 77.0
MS.gene28886.t1 AT3G62260 27.888 251 136 8 74 312 117 334 3.24e-15 77.0
MS.gene28886.t1 AT3G15260 26.481 287 139 10 66 346 66 286 3.69e-15 75.9
MS.gene28886.t1 AT3G15260 26.481 287 139 10 66 346 66 286 3.69e-15 75.9
MS.gene28886.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28886.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28886.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28886.t1 AT1G17550 27.778 252 123 9 70 296 231 448 9.66e-15 76.3
MS.gene28886.t1 AT1G17550 27.778 252 123 9 70 296 231 448 9.66e-15 76.3
MS.gene28886.t1 AT1G18030 26.970 330 179 13 4 314 48 334 1.65e-14 74.7
MS.gene28886.t1 AT2G34740 23.985 271 147 6 76 346 121 332 1.71e-14 74.3
MS.gene28886.t1 AT1G22280 26.462 325 161 14 32 346 28 284 2.45e-14 73.2
MS.gene28886.t1 AT3G16800 27.753 227 114 9 134 348 65 253 3.21e-14 72.4
MS.gene28886.t1 AT3G16800 27.753 227 114 9 134 348 65 253 3.21e-14 72.4
MS.gene28886.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28886.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28886.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28886.t1 AT4G31860 24.042 287 152 7 55 301 33 293 7.51e-14 72.0
MS.gene28886.t1 AT1G34750 26.336 262 145 10 34 294 31 245 9.87e-14 70.9
MS.gene28886.t1 AT3G11410 28.137 263 114 9 74 311 137 349 1.34e-13 72.0
MS.gene28886.t1 AT1G03590 27.673 318 162 12 73 357 89 371 1.44e-13 72.4
MS.gene28886.t1 AT1G22280 25.472 318 167 11 32 346 28 278 1.91e-13 70.5
MS.gene28886.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28886.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28886.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28886.t1 AT1G16220 28.755 233 113 11 130 349 185 377 2.99e-13 71.6
MS.gene28886.t1 AT3G17250 26.421 299 139 12 74 351 158 396 1.10e-12 69.3
MS.gene28886.t1 AT5G27930 28.899 218 102 10 142 347 177 353 1.67e-12 68.6
MS.gene28886.t1 AT5G27930 28.899 218 102 10 142 347 177 353 1.67e-12 68.6
MS.gene28886.t1 AT5G36250 29.249 253 135 9 142 387 207 422 3.02e-12 68.2
MS.gene28886.t1 AT1G18030 27.477 222 113 9 77 284 112 299 1.36e-11 65.5
MS.gene28886.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28886.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28886.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28886.t1 AT4G31860 25.989 177 97 4 142 314 160 306 2.38e-11 65.1
MS.gene28886.t1 AT2G34740 25.000 208 117 5 77 284 118 286 4.92e-11 63.5
MS.gene28886.t1 AT4G32950 25.676 296 154 13 72 349 70 317 4.96e-11 63.9
MS.gene28886.t1 AT2G34740 25.000 208 117 5 77 284 136 304 6.36e-11 63.5

Find 109 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCGGGCTGTCAGGGCAAC+TGG 0.169978 8.2:+29976128 MS.gene28886:CDS
GGTGATTCCCGTGCTGTTCT+TGG 0.209661 8.2:+29976107 MS.gene28886:CDS
CTGTTCTTGGGCGGGCTGTC+AGG 0.232915 8.2:+29976120 MS.gene28886:CDS
CAGGGCAACTGGGGAGGTTT+TGG 0.241199 8.2:+29976139 MS.gene28886:CDS
TATTTGCCTCTGATGGTCTT+TGG 0.284448 8.2:+29979108 MS.gene28886:CDS
TTTCTAGATACTGGTCCTTA+TGG 0.291779 8.2:+29975048 MS.gene28886:CDS
GCTGATCAAAGTGGCTTTGC+TGG 0.294250 8.2:+29979615 MS.gene28886:CDS
ATTTGCCTCTGATGGTCTTT+GGG 0.306722 8.2:+29979109 MS.gene28886:CDS
TGGTGACGTATACCTTAAAA+AGG 0.353640 8.2:+29978962 MS.gene28886:CDS
GATGGGTCAGAGCTCAAAAT+TGG 0.354169 8.2:-29979044 None:intergenic
AGCAGAGCAAGCACAGTAAC+AGG 0.357274 8.2:+29979757 MS.gene28886:CDS
TGCTGTGGGATCTTGTTGTT+TGG 0.369159 8.2:+29976043 MS.gene28886:CDS
CCTGTGTCACTGAGGGGAGC+TGG 0.383832 8.2:+29979784 MS.gene28886:CDS
CTGGCACCAATGGAACTTCC+AGG 0.385848 8.2:+29979829 MS.gene28886:CDS
CTCTTGTCTAACAGACTCTA+TGG 0.388711 8.2:-29976192 None:intergenic
GTGATTCCCGTGCTGTTCTT+GGG 0.405392 8.2:+29976108 MS.gene28886:CDS
GATGCTGGACAGCATCTCTT+TGG 0.416248 8.2:+29974949 MS.gene28886:CDS
GGCTGTCAGGGCAACTGGGG+AGG 0.418778 8.2:+29976133 MS.gene28886:CDS
TTCCCGTGCTGTTCTTGGGC+GGG 0.423445 8.2:+29976112 MS.gene28886:CDS
TTGGGAACACCTTAGCAATC+AGG 0.424837 8.2:+29979127 MS.gene28886:CDS
CGAAGATCTTCTCCGCCAAC+AGG 0.427699 8.2:-29974872 None:intergenic
GGCGGGCTGTCAGGGCAACT+GGG 0.430283 8.2:+29976129 MS.gene28886:CDS
CGTTATGCTCCGGCGAAAGC+TGG 0.431768 8.2:-29976166 None:intergenic
TGTTCTTGGGCGGGCTGTCA+GGG 0.432328 8.2:+29976121 MS.gene28886:CDS
TTTCTGATATTTGCCTCTGA+TGG 0.449916 8.2:+29979101 MS.gene28886:CDS
TGTTTGGTCGGTGTGATTTG+TGG 0.462687 8.2:+29976059 MS.gene28886:CDS
TCCCCTACCGTCTAGATCTC+TGG 0.468407 8.2:+29979810 MS.gene28886:CDS
TTATTCCATGGCGGTTGTGC+AGG 0.470210 8.2:+29974975 MS.gene28886:CDS
TTCTCCGCCAACAGGCAGTT+AGG 0.472119 8.2:-29974864 None:intergenic
AGTTCATGAACAGATATTGA+TGG 0.473558 8.2:-29979062 None:intergenic
GCAGCGATCTGAGGATTCAT+AGG 0.487144 8.2:-29976023 None:intergenic
TGGGAGTGGTTACTAAGCAC+TGG 0.488272 8.2:+29976000 MS.gene28886:CDS
GATCAGAGTCAGATTGAGTC+TGG 0.489235 8.2:+29975015 MS.gene28886:CDS
GTTGGTGTTTATGATGGTCA+TGG 0.489495 8.2:+29975078 MS.gene28886:CDS
GCACAACGTGTGGCGGGTGA+AGG 0.490325 8.2:+29976259 MS.gene28886:CDS
CTGTTGGCGGAGAAGATCTT+CGG 0.491080 8.2:+29974873 MS.gene28886:CDS
CCAATGGAACTTCCAGGTCC+TGG 0.492643 8.2:+29979835 MS.gene28886:CDS
GTCTAGATCTCTGGCACCAA+TGG 0.503834 8.2:+29979819 MS.gene28886:CDS
AGAGATGCATTCCTTGCATC+CGG 0.504191 8.2:+29976211 MS.gene28886:CDS
CCAGCTCCCCTCAGTGACAC+AGG 0.506179 8.2:-29979784 None:intergenic
CCAGGACCTGGAAGTTCCAT+TGG 0.507568 8.2:-29979835 None:intergenic
GCATATCAAGCCACAGAAGA+AGG 0.508277 8.2:+29975972 MS.gene28886:CDS
GTGGGATCTTGTTGTTTGGT+CGG 0.514582 8.2:+29976047 MS.gene28886:CDS
ATTCCCGTGCTGTTCTTGGG+CGG 0.514589 8.2:+29976111 MS.gene28886:CDS
GTATGCTAAGTTTCGCCTAC+GGG 0.516750 8.2:+29979007 MS.gene28886:CDS
TGCCAGAGATCTAGACGGTA+GGG 0.519564 8.2:-29979812 None:intergenic
GCGGGCTGTCAGGGCAACTG+GGG 0.520374 8.2:+29976130 MS.gene28886:CDS
TTCTTTCTTTCCGCAAACAT+CGG 0.526800 8.2:-29974908 None:intergenic
GCGGGTGAAGGGTCTAATAC+AGG 0.528896 8.2:+29976271 MS.gene28886:CDS
TTTGGCAATCCAGCTTTCGC+CGG 0.531684 8.2:+29976157 MS.gene28886:CDS
CAGCCACATCAGCCAGGACC+TGG 0.534031 8.2:-29979847 None:intergenic
TCTCTTTGGTGATTATTCCA+TGG 0.537286 8.2:+29974963 MS.gene28886:CDS
ACACCAACAAAAGTACCATA+AGG 0.538409 8.2:-29975063 None:intergenic
TTTAAGGTATACGTCACCAA+TGG 0.540169 8.2:-29978958 None:intergenic
CTGCTGTGGTACAAAGATGC+TGG 0.541265 8.2:+29974934 MS.gene28886:CDS
CACAACGTGTGGCGGGTGAA+GGG 0.546014 8.2:+29976260 MS.gene28886:CDS
TTCTAAAGCACAACGTGTGG+CGG 0.549441 8.2:+29976252 MS.gene28886:CDS
AGCCCGCCCAAGAACAGCAC+GGG 0.549498 8.2:-29976114 None:intergenic
TCTAAAGCACAACGTGTGGC+GGG 0.553137 8.2:+29976253 MS.gene28886:CDS
TTTCGGGTCATCCGGATGCA+AGG 0.553848 8.2:-29976222 None:intergenic
ATCATACAGCCACATCAGCC+AGG 0.556821 8.2:-29979853 None:intergenic
CAAATGAAGCGAGAAGTCTC+AGG 0.560587 8.2:-29975105 None:intergenic
GAATCCTCAGATCGCTGCTG+TGG 0.560810 8.2:+29976028 MS.gene28886:CDS
CAGCTCCCCTCAGTGACACA+GGG 0.561408 8.2:-29979783 None:intergenic
GTTCATGAACAGATATTGAT+GGG 0.564983 8.2:-29979061 None:intergenic
ACTTCCTAACTGCCTGTTGG+CGG 0.568998 8.2:+29974860 MS.gene28886:CDS
GTCTGTGGAGGTTATTCGAA+AGG 0.570871 8.2:+29975950 MS.gene28886:CDS
GTGCAGATTTCTAGATCCAT+TGG 0.570962 8.2:+29978942 MS.gene28886:intron
CAACAGCATCCTGATTGCTA+AGG 0.571092 8.2:-29979136 None:intergenic
TCTGACTCTGATCTTCAAGC+AGG 0.572462 8.2:-29975005 None:intergenic
ATATTTATCTTACACTGTGA+GGG 0.575409 8.2:-29979175 None:intergenic
CCAGTATCTAGAAAACTAAG+AGG 0.576069 8.2:-29975039 None:intergenic
GATGTTTGCGGAAAGAAAGA+AGG 0.576694 8.2:+29974910 MS.gene28886:CDS
TGGACTTCCTAACTGCCTGT+TGG 0.580966 8.2:+29974857 MS.gene28886:CDS
TCCCAGAAAACCTTCTTCTG+TGG 0.582092 8.2:-29975982 None:intergenic
AGAAAATCATCCGATGTTTG+CGG 0.582622 8.2:+29974898 MS.gene28886:CDS
TGTATGCTAAGTTTCGCCTA+CGG 0.583341 8.2:+29979006 MS.gene28886:CDS
GATCCCACAGCAGCGATCTG+AGG 0.585680 8.2:-29976032 None:intergenic
CAGCCCGCCCAAGAACAGCA+CGG 0.596746 8.2:-29976115 None:intergenic
GTGCCAGAGATCTAGACGGT+AGG 0.597354 8.2:-29979813 None:intergenic
ATTAGCCTGCACAACCGCCA+TGG 0.605073 8.2:-29974980 None:intergenic
TTTATCTTACACTGTGAGGG+TGG 0.608136 8.2:-29979172 None:intergenic
TATATTTATCTTACACTGTG+AGG 0.610993 8.2:-29979176 None:intergenic
CTCCCCTCAGTGACACAGGG+GGG 0.613428 8.2:-29979780 None:intergenic
GCTCCCCTCAGTGACACAGG+GGG 0.615642 8.2:-29979781 None:intergenic
AATCCTCAGATCGCTGCTGT+GGG 0.623833 8.2:+29976029 MS.gene28886:CDS
GCCAGAGATCTAGACGGTAG+GGG 0.626299 8.2:-29979811 None:intergenic
GTGTTCCCAAAGACCATCAG+AGG 0.629985 8.2:-29979114 None:intergenic
CAGCCAAGAAAAGAGAGATG+AGG 0.639513 8.2:+29979641 MS.gene28886:CDS
TTGGTCGGTGTGATTTGTGG+TGG 0.641640 8.2:+29976062 MS.gene28886:CDS
TCGTTCTAAAGCACAACGTG+TGG 0.642320 8.2:+29976249 MS.gene28886:CDS
GGAGCATAAGTCTATGTCTG+TGG 0.645363 8.2:+29975935 MS.gene28886:CDS
GCATAAGTCTATGTCTGTGG+AGG 0.647360 8.2:+29975938 MS.gene28886:CDS
GTCAAGAAATATAACTACAA+CGG 0.650696 8.2:-29979722 None:intergenic
CTTTGGTGATTATTCCATGG+CGG 0.657160 8.2:+29974966 MS.gene28886:CDS
TGCTCGGAAGCTGATCAAAG+TGG 0.660495 8.2:+29979606 MS.gene28886:CDS
GCTTTCGCCGGAGCATAACG+TGG 0.662934 8.2:+29976169 MS.gene28886:CDS
CTACAACGGTGATGTCGTCG+TGG 0.663620 8.2:-29979708 None:intergenic
TCTATGGCCACGTTATGCTC+CGG 0.666513 8.2:-29976176 None:intergenic
AGCTCCCCTCAGTGACACAG+GGG 0.673101 8.2:-29979782 None:intergenic
GGAAATGACGACGGACACCT+CGG 0.676569 8.2:-29979687 None:intergenic
TCACTGTACATTGCAAACCT+CGG 0.676865 8.2:+29976086 MS.gene28886:CDS
GAAAGAAAGAAGGTCTGCTG+TGG 0.683737 8.2:+29974920 MS.gene28886:CDS
GGTGTTTATGATGGTCATGG+TGG 0.696441 8.2:+29975081 MS.gene28886:CDS
AGGCGAAACTTAGCATACAG+TGG 0.711073 8.2:-29979002 None:intergenic
ATTGGTGCCAGAGATCTAGA+CGG 0.715928 8.2:-29979817 None:intergenic
GATCTGAAGAAAATTGACCG+AGG 0.731520 8.2:+29979670 MS.gene28886:CDS
TGTCGTCGTGGAAATGACGA+CGG 0.744392 8.2:-29979696 None:intergenic
GAACAGCACGGGAATCACCG+AGG 0.758772 8.2:-29976103 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTTTTATTTA+AGG + chr8.2:29975903-29975922 MS.gene28886:intron 0.0%
!!! GTTCTAAATTTTATTTTTTT+TGG + chr8.2:29975164-29975183 MS.gene28886:intron 10.0%
!!! TTTTTTAAAAATATGTTCTT+TGG - chr8.2:29977549-29977568 None:intergenic 10.0%
!! AAAAAGAAAGAAAAAATCAA+TGG + chr8.2:29975536-29975555 MS.gene28886:intron 15.0%
!! AATTATATTGCAATTATACA+AGG - chr8.2:29978203-29978222 None:intergenic 15.0%
!! ATTTGATTAATTCACTTTAA+AGG + chr8.2:29975253-29975272 MS.gene28886:intron 15.0%
!! TGAATTTCAATATGAAATTA+GGG - chr8.2:29978341-29978360 None:intergenic 15.0%
!! TGTAAGATAAATATACTATA+TGG + chr8.2:29979184-29979203 MS.gene28886:intron 15.0%
!! TTATTGTGTGTTAATTTAAT+GGG + chr8.2:29975200-29975219 MS.gene28886:intron 15.0%
!! TTTGATTAATTCACTTTAAA+GGG + chr8.2:29975254-29975273 MS.gene28886:intron 15.0%
!!! TATTATATTTGTCTTTTTGT+TGG + chr8.2:29976630-29976649 MS.gene28886:intron 15.0%
!!! TCTTTTATAAGATGAAATTA+CGG - chr8.2:29977870-29977889 None:intergenic 15.0%
!!! TGATTGTTTTAAAATGTTTA+TGG + chr8.2:29975230-29975249 MS.gene28886:intron 15.0%
!! AAAAATAGGACTGAAAAATA+AGG - chr8.2:29976355-29976374 None:intergenic 20.0%
!! AAAATAGGACTGAAAAATAA+GGG - chr8.2:29976354-29976373 None:intergenic 20.0%
!! AAGCATGTTAAATGTATAAA+AGG - chr8.2:29979323-29979342 None:intergenic 20.0%
!! AAGGATATATGTATTATTGT+AGG + chr8.2:29979554-29979573 MS.gene28886:intron 20.0%
!! ATACTACTATAACTAATCAA+AGG - chr8.2:29975578-29975597 None:intergenic 20.0%
!! CAATTTCCAAGAAAAAAAAT+AGG - chr8.2:29976369-29976388 None:intergenic 20.0%
!! CATCAATATCATTTATATGA+GGG - chr8.2:29979396-29979415 None:intergenic 20.0%
!! CTCAAATTAGAGATATTAAT+TGG - chr8.2:29978602-29978621 None:intergenic 20.0%
!! GAATTTCAATATGAAATTAG+GGG - chr8.2:29978340-29978359 None:intergenic 20.0%
!! GTGAATTTCAATATGAAATT+AGG - chr8.2:29978342-29978361 None:intergenic 20.0%
!! GTTATTGTGTGTTAATTTAA+TGG + chr8.2:29975199-29975218 MS.gene28886:intron 20.0%
!! TACTTGATAAATCATTGTTA+TGG + chr8.2:29975725-29975744 MS.gene28886:intron 20.0%
!! TAGATTGTTTGTATAATTAC+AGG - chr8.2:29976770-29976789 None:intergenic 20.0%
!! TCTCCATTTCTTAAAATAAA+TGG - chr8.2:29978676-29978695 None:intergenic 20.0%
!! TTACTTCAAAACTATAGTAA+TGG + chr8.2:29978644-29978663 MS.gene28886:intron 20.0%
!!! ATTTATTTTAAGAAATGGAG+AGG + chr8.2:29978675-29978694 MS.gene28886:intron 20.0%
!!! ATTTTATGCAAATATGTGAT+CGG - chr8.2:29977270-29977289 None:intergenic 20.0%
!!! CTATTTTTTTTCTTGGAAAT+TGG + chr8.2:29976367-29976386 MS.gene28886:intron 20.0%
!!! GATGAATTTTGAGTTATATT+TGG - chr8.2:29977909-29977928 None:intergenic 20.0%
!!! GTTGTTTCTTTTTTGTTTTA+TGG + chr8.2:29979206-29979225 MS.gene28886:intron 20.0%
!!! TGTCCATTTATTTTAAGAAA+TGG + chr8.2:29978670-29978689 MS.gene28886:intron 20.0%
!!! TTGATTAATTCACTTTAAAG+GGG + chr8.2:29975255-29975274 MS.gene28886:intron 20.0%
!!! TTTTATGACGATAAAAGATT+TGG - chr8.2:29978279-29978298 None:intergenic 20.0%
! ACTTAGCATATTCTTTACTT+CGG - chr8.2:29978398-29978417 None:intergenic 25.0%
! AGCTATACATCTTAAATCTT+AGG - chr8.2:29978742-29978761 None:intergenic 25.0%
! AGGATTTCTACATCAAATAA+TGG + chr8.2:29977474-29977493 MS.gene28886:intron 25.0%
! AGTAAAGAATATGCTAAGTA+TGG + chr8.2:29978399-29978418 MS.gene28886:intron 25.0%
! AGTTTACAATTACTATGTTC+AGG + chr8.2:29977789-29977808 MS.gene28886:intron 25.0%
! ATACACCAAAACTATAGTAA+TGG - chr8.2:29978573-29978592 None:intergenic 25.0%
! ATATCCATCAAGAATTCAAA+AGG - chr8.2:29977957-29977976 None:intergenic 25.0%
! ATATTTATCTTACACTGTGA+GGG - chr8.2:29979178-29979197 None:intergenic 25.0%
! ATCAAGTAACTACAACAATT+AGG - chr8.2:29975713-29975732 None:intergenic 25.0%
! ATCGAAGTTTCTATTGAATT+TGG + chr8.2:29978858-29978877 MS.gene28886:intron 25.0%
! ATCGTCATAAAAAGATGTAT+AGG + chr8.2:29978287-29978306 MS.gene28886:intron 25.0%
! CATAACGCTTATTCAAATAA+TGG + chr8.2:29978470-29978489 MS.gene28886:intron 25.0%
! CATTATTTGAATAAGCGTTA+TGG - chr8.2:29978472-29978491 None:intergenic 25.0%
! CCATCAATATCATTTATATG+AGG - chr8.2:29979397-29979416 None:intergenic 25.0%
! CCTCATATAAATGATATTGA+TGG + chr8.2:29979394-29979413 MS.gene28886:intron 25.0%
! GAAAATAGAGTAACAATAGT+TGG - chr8.2:29977449-29977468 None:intergenic 25.0%
! GATATTGATGGAAGATAAAA+TGG + chr8.2:29979406-29979425 MS.gene28886:intron 25.0%
! GCTATACATCTTAAATCTTA+GGG - chr8.2:29978741-29978760 None:intergenic 25.0%
! GGATTTCTACATCAAATAAT+GGG + chr8.2:29977475-29977494 MS.gene28886:intron 25.0%
! GTCAAGAAATATAACTACAA+CGG - chr8.2:29979725-29979744 None:intergenic 25.0%
! TAAAAAGGCAGAATTTAACA+GGG + chr8.2:29978977-29978996 MS.gene28886:CDS 25.0%
! TAATTCAACAAATCAAAGCA+TGG + chr8.2:29976671-29976690 MS.gene28886:intron 25.0%
! TATATTTATCTTACACTGTG+AGG - chr8.2:29979179-29979198 None:intergenic 25.0%
! TCGTATGATGTTAAATTCTT+TGG + chr8.2:29978883-29978902 MS.gene28886:intron 25.0%
! TGATCAGTATCTAAGAAATT+GGG + chr8.2:29976884-29976903 MS.gene28886:intron 25.0%
! TGTTTGTATAATTACAGGAT+AGG - chr8.2:29976765-29976784 None:intergenic 25.0%
! TTAAAAAGGCAGAATTTAAC+AGG + chr8.2:29978976-29978995 MS.gene28886:CDS 25.0%
! TTGATCAGTATCTAAGAAAT+TGG + chr8.2:29976883-29976902 MS.gene28886:intron 25.0%
! TTGGTTAAATTCATGTTCAA+TGG + chr8.2:29975815-29975834 MS.gene28886:intron 25.0%
!! AAAAACACAACCAATTTTTC+TGG - chr8.2:29977625-29977644 None:intergenic 25.0%
!! AAAACACAACCAATTTTTCT+GGG - chr8.2:29977624-29977643 None:intergenic 25.0%
!! TACATGTTTTCTATTTTGCA+GGG + chr8.2:29979580-29979599 MS.gene28886:intron 25.0%
!! TATTCCTTTTGAATTCTTGA+TGG + chr8.2:29977950-29977969 MS.gene28886:intron 25.0%
!! TGTTAAATTCTGCCTTTTTA+AGG - chr8.2:29978977-29978996 None:intergenic 25.0%
!! TTACATGTTTTCTATTTTGC+AGG + chr8.2:29979579-29979598 MS.gene28886:intron 25.0%
!! TTTTATGCAAATATGTGATC+GGG - chr8.2:29977269-29977288 None:intergenic 25.0%
!!! ATTCAAATAATGGACTGTTA+GGG + chr8.2:29978480-29978499 MS.gene28886:intron 25.0%
!!! GATGTCCATTTATTTTGAAA+TGG - chr8.2:29978549-29978568 None:intergenic 25.0%
!!! TATTCAAATAATGGACTGTT+AGG + chr8.2:29978479-29978498 MS.gene28886:intron 25.0%
!!! TTCAGTCCTATTTTTTTTCT+TGG + chr8.2:29976360-29976379 MS.gene28886:intron 25.0%
!!! TTTTATTTAAGGATTTGCGA+CGG + chr8.2:29975914-29975933 MS.gene28886:intron 25.0%
!!! TTTTGAATTCTTGATGGATA+TGG + chr8.2:29977956-29977975 MS.gene28886:intron 25.0%
AACATGTTATGAGAAAGTCA+AGG - chr8.2:29975768-29975787 None:intergenic 30.0%
AATTCAAGATACGAACCAAA+TGG + chr8.2:29978219-29978238 MS.gene28886:intron 30.0%
AGAAACTCAAACACAAAAAC+AGG - chr8.2:29977520-29977539 None:intergenic 30.0%
AGTTATATTTGGCATCTTTC+AGG - chr8.2:29977898-29977917 None:intergenic 30.0%
AGTTCATGAACAGATATTGA+TGG - chr8.2:29979065-29979084 None:intergenic 30.0%
ATATTATATCCGTTCATGAC+TGG + chr8.2:29979248-29979267 MS.gene28886:intron 30.0%
ATTCAAGATACGAACCAAAT+GGG + chr8.2:29978220-29978239 MS.gene28886:intron 30.0%
CATAAATGTTATTGAGGTAG+AGG + chr8.2:29977983-29978002 MS.gene28886:intron 30.0%
CATGTATTAGATCATACACA+TGG - chr8.2:29977366-29977385 None:intergenic 30.0%
CCTCTCCATTTCAAAATAAA+TGG + chr8.2:29978541-29978560 MS.gene28886:intron 30.0%
CTAGAAAAGACTCCAAATTA+GGG + chr8.2:29976737-29976756 MS.gene28886:intron 30.0%
CTTAAAACGTAGCTATCAAA+GGG + chr8.2:29977180-29977199 MS.gene28886:intron 30.0%
GATCAGTATCTAAGAAATTG+GGG + chr8.2:29976885-29976904 MS.gene28886:intron 30.0%
GGTGATCATAAATGTTATTG+AGG + chr8.2:29977977-29977996 MS.gene28886:intron 30.0%
GTCATAAAAAGATGTATAGG+CGG + chr8.2:29978290-29978309 MS.gene28886:intron 30.0%
GTTCATGAACAGATATTGAT+GGG - chr8.2:29979064-29979083 None:intergenic 30.0%
TAAGATGAAATTACGGTTTG+AGG - chr8.2:29977863-29977882 None:intergenic 30.0%
TAGAAAAGACTCCAAATTAG+GGG + chr8.2:29976738-29976757 MS.gene28886:intron 30.0%
TCATAAAAAGATGTATAGGC+GGG + chr8.2:29978291-29978310 MS.gene28886:intron 30.0%
TGAATTAACTTCATGTTTCG+AGG + chr8.2:29978121-29978140 MS.gene28886:intron 30.0%
TGATGGAAGATAAAATGGAT+AGG + chr8.2:29979411-29979430 MS.gene28886:intron 30.0%
TTAAAACGTAGCTATCAAAG+GGG + chr8.2:29977181-29977200 MS.gene28886:intron 30.0%
TTAAAAGCTAGCTATCAAGA+GGG + chr8.2:29976917-29976936 MS.gene28886:intron 30.0%
TTAATACAACCTACAACTAC+AGG - chr8.2:29978777-29978796 None:intergenic 30.0%
TTCGTCACAAAAAGATGTAT+AGG + chr8.2:29978245-29978264 MS.gene28886:intron 30.0%
TTTATGCAAATATGTGATCG+GGG - chr8.2:29977268-29977287 None:intergenic 30.0%
TTTGATGTAGAAATCCTAAG+AGG - chr8.2:29977471-29977490 None:intergenic 30.0%
! AAACACAACCAATTTTTCTG+GGG - chr8.2:29977623-29977642 None:intergenic 30.0%
! AATATGCTAAGTATGGATTG+TGG + chr8.2:29978406-29978425 MS.gene28886:intron 30.0%
! ACATGTTTTCTATTTTGCAG+GGG + chr8.2:29979581-29979600 MS.gene28886:intron 30.0%
! AGCTGTGACAAATCTTATTT+AGG + chr8.2:29979461-29979480 MS.gene28886:intron 30.0%
! ATTCTCATTTCATGTTGCTT+TGG + chr8.2:29975841-29975860 MS.gene28886:intron 30.0%
! CATCTCCATTACTATAGTTT+TGG + chr8.2:29978565-29978584 MS.gene28886:intron 30.0%
! TCTAGGAATACACATTTTTG+AGG + chr8.2:29978006-29978025 MS.gene28886:intron 30.0%
! TGTTACTCTATTTTCCTCTT+AGG + chr8.2:29977454-29977473 MS.gene28886:intron 30.0%
!! ACTTTTGTTGGTGTTTATGA+TGG + chr8.2:29975072-29975091 MS.gene28886:CDS 30.0%
!! ATAGCAGCTTTAAAGAGTAA+AGG + chr8.2:29979535-29979554 MS.gene28886:intron 30.0%
!! ATTTAGGATGCACATTTTGA+TGG + chr8.2:29979477-29979496 MS.gene28886:intron 30.0%
!! CTTTGATAGCTACGTTTTAA+GGG - chr8.2:29977181-29977200 None:intergenic 30.0%
!! TGTTCAGTGGATTATTTAAG+TGG - chr8.2:29976953-29976972 None:intergenic 30.0%
!! TTCTCATTTCATGTTGCTTT+GGG + chr8.2:29975842-29975861 MS.gene28886:intron 30.0%
!!! CCATTTATTTTGAAATGGAG+AGG - chr8.2:29978544-29978563 None:intergenic 30.0%
!!! TCTGTAGTTTTTTCAGCTTA+GGG + chr8.2:29976460-29976479 MS.gene28886:intron 30.0%
!!! TCTTGATAGCTAGCTTTTAA+GGG - chr8.2:29976917-29976936 None:intergenic 30.0%
!!! TGCTTTAGAACGACAATTTT+CGG - chr8.2:29976242-29976261 None:intergenic 30.0%
AAGTAAGTTGCTCAGTTTAC+AGG + chr8.2:29975679-29975698 MS.gene28886:intron 35.0%
AAGTGAAATACTCGCTTTAG+AGG + chr8.2:29975790-29975809 MS.gene28886:intron 35.0%
AATTAAGCCCCCAGAAAAAT+TGG + chr8.2:29977612-29977631 MS.gene28886:intron 35.0%
ACCTCTTTCTCATAATGAAG+TGG - chr8.2:29976807-29976826 None:intergenic 35.0%
AGAAAATCATCCGATGTTTG+CGG + chr8.2:29974898-29974917 MS.gene28886:CDS 35.0%
ATCAATATGCATGCCTCATT+GGG - chr8.2:29976868-29976887 None:intergenic 35.0%
CACAAAAAGATGTATAGGCT+TGG + chr8.2:29978250-29978269 MS.gene28886:intron 35.0%
CCAGTATCTAGAAAACTAAG+AGG - chr8.2:29975042-29975061 None:intergenic 35.0%
CCTCTTTCTCATAATGAAGT+GGG - chr8.2:29976806-29976825 None:intergenic 35.0%
CCTTAAAACGTAGCTATCAA+AGG + chr8.2:29977179-29977198 MS.gene28886:intron 35.0%
CTATCTTATCCTGTAGTTGT+AGG + chr8.2:29978765-29978784 MS.gene28886:intron 35.0%
CTTAAAAGCTAGCTATCAAG+AGG + chr8.2:29976916-29976935 MS.gene28886:intron 35.0%
GCTAGAAAAGACTCCAAATT+AGG + chr8.2:29976736-29976755 MS.gene28886:intron 35.0%
GGTGGATATAATCACATTGT+GGG + chr8.2:29978173-29978192 MS.gene28886:intron 35.0%
GTGCTTAGATACCTATCAAA+TGG - chr8.2:29977146-29977165 None:intergenic 35.0%
TACATCTTAAATCTTAGGGC+TGG - chr8.2:29978737-29978756 None:intergenic 35.0%
TCAAAAGCCTTGATTGTTGA+GGG + chr8.2:29977327-29977346 MS.gene28886:intron 35.0%
TCAATATGAAATTAGGGGTC+AGG - chr8.2:29978335-29978354 None:intergenic 35.0%
TTCTTTACTTCGGAAAAGTG+AGG - chr8.2:29978388-29978407 None:intergenic 35.0%
TTCTTTCTTTCCGCAAACAT+CGG - chr8.2:29974911-29974930 None:intergenic 35.0%
TTTCTAGATACTGGTCCTTA+TGG + chr8.2:29975048-29975067 MS.gene28886:CDS 35.0%
TTTCTGATATTTGCCTCTGA+TGG + chr8.2:29979101-29979120 MS.gene28886:CDS 35.0%
! AACACAACCAATTTTTCTGG+GGG - chr8.2:29977622-29977641 None:intergenic 35.0%
! ATGTGATGTTGCTTACTTGT+AGG + chr8.2:29975313-29975332 MS.gene28886:intron 35.0%
! CATTAGTGCTATTCCTCATA+AGG + chr8.2:29977292-29977311 MS.gene28886:intron 35.0%
! GTACTGATGACAAACATGAT+TGG - chr8.2:29977817-29977836 None:intergenic 35.0%
! GTGATTGGCATTTTTCATTG+TGG + chr8.2:29976305-29976324 MS.gene28886:intron 35.0%
! TCTCTTTGGTGATTATTCCA+TGG + chr8.2:29974963-29974982 MS.gene28886:CDS 35.0%
! TGGTGACGTATACCTTAAAA+AGG + chr8.2:29978962-29978981 MS.gene28886:CDS 35.0%
! TGTGATGTTGCTTACTTGTA+GGG + chr8.2:29975314-29975333 MS.gene28886:intron 35.0%
! TTTAAGGTATACGTCACCAA+TGG - chr8.2:29978961-29978980 None:intergenic 35.0%
! TTTTGTGACGAAAACCCATT+TGG - chr8.2:29978237-29978256 None:intergenic 35.0%
!! ACACCAACAAAAGTACCATA+AGG - chr8.2:29975066-29975085 None:intergenic 35.0%
!! ACTCTTTAAAGCTGCTATCA+AGG - chr8.2:29979533-29979552 None:intergenic 35.0%
!! ATTTTTCTGGGGGCTTAATT+TGG - chr8.2:29977612-29977631 None:intergenic 35.0%
!! CCTCTTAGTTTTCTAGATAC+TGG + chr8.2:29975039-29975058 MS.gene28886:CDS 35.0%
!! CCTTTGATAGCTACGTTTTA+AGG - chr8.2:29977182-29977201 None:intergenic 35.0%
!!! ACACATTTTTGAGGTGTTGA+TGG + chr8.2:29978015-29978034 MS.gene28886:intron 35.0%
!!! CACATTTTTGAGGTGTTGAT+GGG + chr8.2:29978016-29978035 MS.gene28886:intron 35.0%
!!! CTCTTGATAGCTAGCTTTTA+AGG - chr8.2:29976918-29976937 None:intergenic 35.0%
!!! CTGTAGTTTTTTCAGCTTAG+GGG + chr8.2:29976461-29976480 MS.gene28886:intron 35.0%
!!! CTGTTGATTTCTTTTGTAGC+AGG + chr8.2:29979434-29979453 MS.gene28886:intron 35.0%
!!! GCTTTAGAACGACAATTTTC+GGG - chr8.2:29976241-29976260 None:intergenic 35.0%
!!! GTCTGTAGTTTTTTCAGCTT+AGG + chr8.2:29976459-29976478 MS.gene28886:intron 35.0%
!!! TTTGGAGTCTTTTCTAGCTT+TGG - chr8.2:29976734-29976753 None:intergenic 35.0%
AAAAGCCTTGATTGTTGAGG+GGG + chr8.2:29977329-29977348 MS.gene28886:intron 40.0%
AGAACCACTTGACTCAAACA+CGG + chr8.2:29976833-29976852 MS.gene28886:intron 40.0%
AGATAAGAGCCAGTCATGAA+CGG - chr8.2:29979260-29979279 None:intergenic 40.0%
AGTGGACAACAATCCTTATG+AGG - chr8.2:29977308-29977327 None:intergenic 40.0%
ATGTTAAGTCACGTTCTCAG+TGG + chr8.2:29976485-29976504 MS.gene28886:intron 40.0%
ATTTGCCTCTGATGGTCTTT+GGG + chr8.2:29979109-29979128 MS.gene28886:CDS 40.0%
CAAAAGCCTTGATTGTTGAG+GGG + chr8.2:29977328-29977347 MS.gene28886:intron 40.0%
CAGGTATGTTCTGTAGTGAT+TGG + chr8.2:29976290-29976309 MS.gene28886:intron 40.0%
CATAATGAAGTGGGCAGATA+TGG - chr8.2:29976797-29976816 None:intergenic 40.0%
CCCACTTCATTATGAGAAAG+AGG + chr8.2:29976803-29976822 MS.gene28886:intron 40.0%
CGGTGGATATAATCACATTG+TGG + chr8.2:29978172-29978191 MS.gene28886:intron 40.0%
CTCAAAAGCCTTGATTGTTG+AGG + chr8.2:29977326-29977345 MS.gene28886:intron 40.0%
CTCTTGTCTAACAGACTCTA+TGG - chr8.2:29976195-29976214 None:intergenic 40.0%
GATAGGTATCTAAGCACTCT+GGG + chr8.2:29977149-29977168 MS.gene28886:intron 40.0%
GATCAATATGCATGCCTCAT+TGG - chr8.2:29976869-29976888 None:intergenic 40.0%
GATCTGAAGAAAATTGACCG+AGG + chr8.2:29979670-29979689 MS.gene28886:CDS 40.0%
GATGTTTGCGGAAAGAAAGA+AGG + chr8.2:29974910-29974929 MS.gene28886:CDS 40.0%
GATTATATCCACCGCTCTTA+AGG - chr8.2:29978166-29978185 None:intergenic 40.0%
TACTTCGGAAAAGTGAGGTT+GGG - chr8.2:29978383-29978402 None:intergenic 40.0%
TATTTGCCTCTGATGGTCTT+TGG + chr8.2:29979108-29979127 MS.gene28886:CDS 40.0%
TCAATATGCATGCCTCATTG+GGG - chr8.2:29976867-29976886 None:intergenic 40.0%
TCACTGTACATTGCAAACCT+CGG + chr8.2:29976086-29976105 MS.gene28886:CDS 40.0%
TGATAGGTATCTAAGCACTC+TGG + chr8.2:29977148-29977167 MS.gene28886:intron 40.0%
TGTATGCTAAGTTTCGCCTA+CGG + chr8.2:29979006-29979025 MS.gene28886:CDS 40.0%
TGTTATTGAGGTAGAGGTCT+AGG + chr8.2:29977989-29978008 MS.gene28886:intron 40.0%
TTACTTCGGAAAAGTGAGGT+TGG - chr8.2:29978384-29978403 None:intergenic 40.0%
TTTATCTTACACTGTGAGGG+TGG - chr8.2:29979175-29979194 None:intergenic 40.0%
! ATTTTCCCAAACCCACTCAA+TGG - chr8.2:29978712-29978731 None:intergenic 40.0%
! CAACAATCAAGGCTTTTGAG+TGG - chr8.2:29977326-29977345 None:intergenic 40.0%
! CACAAACATTTGTTGGACAC+TGG + chr8.2:29975465-29975484 MS.gene28886:intron 40.0%
! CTTTGGTGATTATTCCATGG+CGG + chr8.2:29974966-29974985 MS.gene28886:CDS 40.0%
! GGTCCTTATGGTACTTTTGT+TGG + chr8.2:29975060-29975079 MS.gene28886:CDS 40.0%
! GTACCTCATCTCTCTTTTCT+TGG - chr8.2:29979647-29979666 None:intergenic 40.0%
! GTGCAGATTTCTAGATCCAT+TGG + chr8.2:29978942-29978961 MS.gene28886:intron 40.0%
! GTTGGTGTTTATGATGGTCA+TGG + chr8.2:29975078-29975097 MS.gene28886:CDS 40.0%
! TGGCATTTTTCATTGTGGCA+AGG + chr8.2:29976310-29976329 MS.gene28886:intron 40.0%
!! AATACTCGCTTTAGAGGAGT+TGG + chr8.2:29975796-29975815 MS.gene28886:intron 40.0%
!! ACTTCTTTCATTTGCTGTGC+TGG - chr8.2:29978827-29978846 None:intergenic 40.0%
!!! GATAGCTACGTTTTAAGGGT+GGG - chr8.2:29977177-29977196 None:intergenic 40.0%
!!! GATAGCTAGCTTTTAAGGGA+GGG - chr8.2:29976913-29976932 None:intergenic 40.0%
!!! TGATAGCTACGTTTTAAGGG+TGG - chr8.2:29977178-29977197 None:intergenic 40.0%
!!! TGATAGCTAGCTTTTAAGGG+AGG - chr8.2:29976914-29976933 None:intergenic 40.0%
AAAAGTGAGGTTGGGTGCAT+AGG - chr8.2:29978375-29978394 None:intergenic 45.0%
AACCACTTGACTCAAACACG+GGG + chr8.2:29976835-29976854 MS.gene28886:intron 45.0%
ACAGGATAGGACCCCTAATT+TGG - chr8.2:29976752-29976771 None:intergenic 45.0%
ACATCCTATACTACCCGATG+TGG + chr8.2:29976970-29976989 MS.gene28886:intron 45.0%
AGAGATGCATTCCTTGCATC+CGG + chr8.2:29976211-29976230 MS.gene28886:CDS 45.0%
AGAGGATCTCAACTCCTTGA+CGG - chr8.2:29978526-29978545 None:intergenic 45.0%
AGCCTCCTATTCCTTAAGAG+CGG + chr8.2:29978152-29978171 MS.gene28886:intron 45.0%
AGGCGAAACTTAGCATACAG+TGG - chr8.2:29979005-29979024 None:intergenic 45.0%
ATCCACCGCTCTTAAGGAAT+AGG - chr8.2:29978160-29978179 None:intergenic 45.0%
ATCCTATACTACCCGATGTG+GGG + chr8.2:29976972-29976991 MS.gene28886:intron 45.0%
CAAATATGTGATCGGGGCTT+GGG - chr8.2:29977262-29977281 None:intergenic 45.0%
CAAATGAAGCGAGAAGTCTC+AGG - chr8.2:29975108-29975127 None:intergenic 45.0%
CAACAGCATCCTGATTGCTA+AGG - chr8.2:29979139-29979158 None:intergenic 45.0%
CAGCCAAGAAAAGAGAGATG+AGG + chr8.2:29979641-29979660 MS.gene28886:CDS 45.0%
CATCCTATACTACCCGATGT+GGG + chr8.2:29976971-29976990 MS.gene28886:intron 45.0%
CATGAGAATGACGACTGCAA+AGG - chr8.2:29976590-29976609 None:intergenic 45.0%
GAAAGAAAGAAGGTCTGCTG+TGG + chr8.2:29974920-29974939 MS.gene28886:CDS 45.0%
GAACCACTTGACTCAAACAC+GGG + chr8.2:29976834-29976853 MS.gene28886:intron 45.0%
GATCAGAGTCAGATTGAGTC+TGG + chr8.2:29975015-29975034 MS.gene28886:CDS 45.0%
GATGGGTCAGAGCTCAAAAT+TGG - chr8.2:29979047-29979066 None:intergenic 45.0%
GCATAAGTCTATGTCTGTGG+AGG + chr8.2:29975938-29975957 MS.gene28886:CDS 45.0%
GCATATCAAGCCACAGAAGA+AGG + chr8.2:29975972-29975991 MS.gene28886:CDS 45.0%
GCTATCTACTCAGTCTCTAG+AGG - chr8.2:29975348-29975367 None:intergenic 45.0%
GGAGCATAAGTCTATGTCTG+TGG + chr8.2:29975935-29975954 MS.gene28886:CDS 45.0%
GGGTAGTATAGGATGTTCAG+TGG - chr8.2:29976966-29976985 None:intergenic 45.0%
GGTGTTTATGATGGTCATGG+TGG + chr8.2:29975081-29975100 MS.gene28886:CDS 45.0%
GTATGCTAAGTTTCGCCTAC+GGG + chr8.2:29979007-29979026 MS.gene28886:CDS 45.0%
GTCTGTGGAGGTTATTCGAA+AGG + chr8.2:29975950-29975969 MS.gene28886:CDS 45.0%
TCCCAGAAAACCTTCTTCTG+TGG - chr8.2:29975985-29976004 None:intergenic 45.0%
TCTGACTCTGATCTTCAAGC+AGG - chr8.2:29975008-29975027 None:intergenic 45.0%
TGTCGGGCACAAACATTTGT+TGG + chr8.2:29975458-29975477 MS.gene28886:intron 45.0%
TGTTTGGTCGGTGTGATTTG+TGG + chr8.2:29976059-29976078 MS.gene28886:CDS 45.0%
TTGGGAACACCTTAGCAATC+AGG + chr8.2:29979127-29979146 MS.gene28886:CDS 45.0%
! ACGTCTTTGATCAGAAGCGT+TGG + chr8.2:29975490-29975509 MS.gene28886:intron 45.0%
! AGCCACAGAAGAAGGTTTTC+TGG + chr8.2:29975980-29975999 MS.gene28886:CDS 45.0%
! CAGCTCTGACACCATTTGAT+AGG + chr8.2:29977132-29977151 MS.gene28886:intron 45.0%
! CTATCAAATGGTGTCAGAGC+TGG - chr8.2:29977134-29977153 None:intergenic 45.0%
! GCCACAGAAGAAGGTTTTCT+GGG + chr8.2:29975981-29976000 MS.gene28886:CDS 45.0%
! GGTGGGGTATTTAAATGGCT+TGG - chr8.2:29977212-29977231 None:intergenic 45.0%
! TGATAGGGGTGCGAGTATTA+TGG - chr8.2:29977008-29977027 None:intergenic 45.0%
! TGCTCGGTGGGGTATTTAAA+TGG - chr8.2:29977217-29977236 None:intergenic 45.0%
! TTCTGGGGGCTTAATTTGGA+AGG - chr8.2:29977608-29977627 None:intergenic 45.0%
!! AGAAGAAGGTTTTCTGGGAG+TGG + chr8.2:29975986-29976005 MS.gene28886:CDS 45.0%
!! ATTGGTGCCAGAGATCTAGA+CGG - chr8.2:29979820-29979839 None:intergenic 45.0%
!! GGTGTTGATGGGATGCTATT+CGG + chr8.2:29978027-29978046 MS.gene28886:intron 45.0%
!! GTGGGATCTTGTTGTTTGGT+CGG + chr8.2:29976047-29976066 MS.gene28886:CDS 45.0%
!! TCGTTCTAAAGCACAACGTG+TGG + chr8.2:29976249-29976268 MS.gene28886:CDS 45.0%
!! TGCTGTGGGATCTTGTTGTT+TGG + chr8.2:29976043-29976062 MS.gene28886:CDS 45.0%
!! TTCTAAAGCACAACGTGTGG+CGG + chr8.2:29976252-29976271 MS.gene28886:CDS 45.0%
!!! ACGACAATTTTCGGGTCATC+CGG - chr8.2:29976233-29976252 None:intergenic 45.0%
!!! GCGTTTTGAAAGTTTCCCGT+AGG - chr8.2:29979025-29979044 None:intergenic 45.0%
AAACCCACTCAATGGCTGGT+TGG - chr8.2:29978704-29978723 None:intergenic 50.0%
AACCCCACATCGGGTAGTAT+AGG - chr8.2:29976977-29976996 None:intergenic 50.0%
AATCCTCAGATCGCTGCTGT+GGG + chr8.2:29976029-29976048 MS.gene28886:CDS 50.0%
ACATGTGTCGAAGTCGTGTC+GGG + chr8.2:29975442-29975461 MS.gene28886:intron 50.0%
ACTACCGATGTCGACATGTC+AGG - chr8.2:29975390-29975409 None:intergenic 50.0%
ACTTCCTAACTGCCTGTTGG+CGG + chr8.2:29974860-29974879 MS.gene28886:CDS 50.0%
AGCAGAGCAAGCACAGTAAC+AGG + chr8.2:29979757-29979776 MS.gene28886:CDS 50.0%
ATCCCAACCAGCCATTGAGT+GGG + chr8.2:29978698-29978717 MS.gene28886:intron 50.0%
ATCTCAACTCCTTGACGGCA+GGG - chr8.2:29978521-29978540 None:intergenic 50.0%
CAAAGCCCCCTCAACAATCA+AGG - chr8.2:29977337-29977356 None:intergenic 50.0%
CACACCTGACATGTCGACAT+CGG + chr8.2:29975383-29975402 MS.gene28886:intron 50.0%
CACATGTGTCGAAGTCGTGT+CGG + chr8.2:29975441-29975460 MS.gene28886:intron 50.0%
CACCGCTCTTAAGGAATAGG+AGG - chr8.2:29978157-29978176 None:intergenic 50.0%
CTCCTATTCCTTAAGAGCGG+TGG + chr8.2:29978155-29978174 MS.gene28886:intron 50.0%
CTGCTGTGGTACAAAGATGC+TGG + chr8.2:29974934-29974953 MS.gene28886:CDS 50.0%
CTGTTGGCGGAGAAGATCTT+CGG + chr8.2:29974873-29974892 MS.gene28886:CDS 50.0%
GATGCTGGACAGCATCTCTT+TGG + chr8.2:29974949-29974968 MS.gene28886:CDS 50.0%
GCAAATATGTGATCGGGGCT+TGG - chr8.2:29977263-29977282 None:intergenic 50.0%
GCAAGAAGTCATGCGTGCAT+GGG + chr8.2:29976555-29976574 MS.gene28886:intron 50.0%
GCAGCGATCTGAGGATTCAT+AGG - chr8.2:29976026-29976045 None:intergenic 50.0%
GGTTGGGTGCATAGGATACT+AGG - chr8.2:29978367-29978386 None:intergenic 50.0%
GTCTAGATCTCTGGCACCAA+TGG + chr8.2:29979819-29979838 MS.gene28886:CDS 50.0%
GTGTTCCCAAAGACCATCAG+AGG - chr8.2:29979117-29979136 None:intergenic 50.0%
TCTATGGCCACGTTATGCTC+CGG - chr8.2:29976179-29976198 None:intergenic 50.0%
TGCAAGAAGTCATGCGTGCA+TGG + chr8.2:29976554-29976573 MS.gene28886:intron 50.0%
TGCACGCATGACTTCTTGCA+AGG - chr8.2:29976554-29976573 None:intergenic 50.0%
TGCCAGAGATCTAGACGGTA+GGG - chr8.2:29979815-29979834 None:intergenic 50.0%
TGCTCGGAAGCTGATCAAAG+TGG + chr8.2:29979606-29979625 MS.gene28886:CDS 50.0%
TGGACTTCCTAACTGCCTGT+TGG + chr8.2:29974857-29974876 MS.gene28886:CDS 50.0%
TGGGAGTGGTTACTAAGCAC+TGG + chr8.2:29976000-29976019 MS.gene28886:CDS 50.0%
TGTCGTCGTGGAAATGACGA+CGG - chr8.2:29979699-29979718 None:intergenic 50.0%
TTATTCCATGGCGGTTGTGC+AGG + chr8.2:29974975-29974994 MS.gene28886:CDS 50.0%
TTTGGCAATCCAGCTTTCGC+CGG + chr8.2:29976157-29976176 MS.gene28886:CDS 50.0%
! AACCAGCCATTGAGTGGGTT+TGG + chr8.2:29978703-29978722 MS.gene28886:intron 50.0%
! AACCCACTCAATGGCTGGTT+GGG - chr8.2:29978703-29978722 None:intergenic 50.0%
! ACCAGCCATTGAGTGGGTTT+GGG + chr8.2:29978704-29978723 MS.gene28886:intron 50.0%
! ATGGTGTCAGAGCTGGTTGT+TGG - chr8.2:29977127-29977146 None:intergenic 50.0%
! GCTGATCAAAGTGGCTTTGC+TGG + chr8.2:29979615-29979634 MS.gene28886:CDS 50.0%
! GTGATTCCCGTGCTGTTCTT+GGG + chr8.2:29976108-29976127 MS.gene28886:CDS 50.0%
! TCTAAAGCACAACGTGTGGC+GGG + chr8.2:29976253-29976272 MS.gene28886:CDS 50.0%
! TTGGTCGGTGTGATTTGTGG+TGG + chr8.2:29976062-29976081 MS.gene28886:CDS 50.0%
!! TCAGGGGTGGTGCTATGATA+GGG - chr8.2:29977023-29977042 None:intergenic 50.0%
!!! CTATTTTGCAGGGGAGTGCT+CGG + chr8.2:29979590-29979609 MS.gene28886:intron 50.0%
AAACAGGCCCAGACAGAGAG+AGG - chr8.2:29977504-29977523 None:intergenic 55.0%
AACAGGCCCAGACAGAGAGA+GGG - chr8.2:29977503-29977522 None:intergenic 55.0%
ACCGAGCATCCCATACCACT+CGG + chr8.2:29977229-29977248 MS.gene28886:intron 55.0%
ACCGAGTGGTATGGGATGCT+CGG - chr8.2:29977233-29977252 None:intergenic 55.0%
AGTGGTATGGGATGCTCGGT+GGG - chr8.2:29977229-29977248 None:intergenic 55.0%
ATGGGTTCCCTCTCTCTGTC+TGG + chr8.2:29977493-29977512 MS.gene28886:intron 55.0%
CCAATGGAACTTCCAGGTCC+TGG + chr8.2:29979835-29979854 MS.gene28886:CDS 55.0%
CCAGGACCTGGAAGTTCCAT+TGG - chr8.2:29979838-29979857 None:intergenic 55.0%
CGAAGATCTTCTCCGCCAAC+AGG - chr8.2:29974875-29974894 None:intergenic 55.0%
CGTCAATAAGTGTCAGCCGC+CGG - chr8.2:29977057-29977076 None:intergenic 55.0%
CTACAACGGTGATGTCGTCG+TGG - chr8.2:29979711-29979730 None:intergenic 55.0%
CTCCCCGTGTTTGAGTCAAG+TGG - chr8.2:29976840-29976859 None:intergenic 55.0%
CTGGCACCAATGGAACTTCC+AGG + chr8.2:29979829-29979848 MS.gene28886:CDS 55.0%
GAATCCTCAGATCGCTGCTG+TGG + chr8.2:29976028-29976047 MS.gene28886:CDS 55.0%
GAGTGCTCAAACCCCACATC+GGG - chr8.2:29976986-29977005 None:intergenic 55.0%
GATCCCAACCAGCCATTGAG+TGG + chr8.2:29978697-29978716 MS.gene28886:intron 55.0%
GATCTCAACTCCTTGACGGC+AGG - chr8.2:29978522-29978541 None:intergenic 55.0%
GCCAGAGATCTAGACGGTAG+GGG - chr8.2:29979814-29979833 None:intergenic 55.0%
GCGGGTGAAGGGTCTAATAC+AGG + chr8.2:29976271-29976290 MS.gene28886:CDS 55.0%
GGAAATGACGACGGACACCT+CGG - chr8.2:29979690-29979709 None:intergenic 55.0%
GGTACCAGACCGAGTGGTAT+GGG - chr8.2:29977241-29977260 None:intergenic 55.0%
GTCAATAAGTGTCAGCCGCC+GGG - chr8.2:29977056-29977075 None:intergenic 55.0%
GTGCCAGAGATCTAGACGGT+AGG - chr8.2:29979816-29979835 None:intergenic 55.0%
GTGTCAGAGCTGGTTGTTGG+TGG - chr8.2:29977124-29977143 None:intergenic 55.0%
TCCCAAACCCACTCAATGGC+TGG - chr8.2:29978708-29978727 None:intergenic 55.0%
TCCCCTACCGTCTAGATCTC+TGG + chr8.2:29979810-29979829 MS.gene28886:CDS 55.0%
TGGGTTCCCTCTCTCTGTCT+GGG + chr8.2:29977494-29977513 MS.gene28886:intron 55.0%
TTCTCCGCCAACAGGCAGTT+AGG - chr8.2:29974867-29974886 None:intergenic 55.0%
! ATTAGCCTGCACAACCGCCA+TGG - chr8.2:29974983-29975002 None:intergenic 55.0%
! ATTCCCGTGCTGTTCTTGGG+CGG + chr8.2:29976111-29976130 MS.gene28886:CDS 55.0%
! GGAGTGCTCAAACCCCACAT+CGG - chr8.2:29976987-29977006 None:intergenic 55.0%
! GGTGATTCCCGTGCTGTTCT+TGG + chr8.2:29976107-29976126 MS.gene28886:CDS 55.0%
! TTTCGGGTCATCCGGATGCA+AGG - chr8.2:29976225-29976244 None:intergenic 55.0%
!! AGAGCTGGTTGTTGGTGGCT+CGG - chr8.2:29977119-29977138 None:intergenic 55.0%
!! CAGGGGTGGTGCTATGATAG+GGG - chr8.2:29977022-29977041 None:intergenic 55.0%
!! CTCAGGGGTGGTGCTATGAT+AGG - chr8.2:29977024-29977043 None:intergenic 55.0%
!! GGTTGTTGGTGGCTCGGAAA+GGG - chr8.2:29977113-29977132 None:intergenic 55.0%
!! TGGTTGTTGGTGGCTCGGAA+AGG - chr8.2:29977114-29977133 None:intergenic 55.0%
ACGGGGAGAATGCCCCAATG+AGG + chr8.2:29976852-29976871 MS.gene28886:intron 60.0%
AGCTCCCCTCAGTGACACAG+GGG - chr8.2:29979785-29979804 None:intergenic 60.0%
CAGCTCCCCTCAGTGACACA+GGG - chr8.2:29979786-29979805 None:intergenic 60.0%
CGTTATGCTCCGGCGAAAGC+TGG - chr8.2:29976169-29976188 None:intergenic 60.0%
CTCGGAAAGGGCTACCAACG+GGG - chr8.2:29977101-29977120 None:intergenic 60.0%
CTTTCTGATCAGCCCCCCGT+TGG + chr8.2:29977084-29977103 MS.gene28886:intron 60.0%
GAACAGCACGGGAATCACCG+AGG - chr8.2:29976106-29976125 None:intergenic 60.0%
GAACTTCCAGGTCCTGGCTG+AGG + chr8.2:29979841-29979860 MS.gene28886:CDS 60.0%
GAGTGGTATGGGATGCTCGG+TGG - chr8.2:29977230-29977249 None:intergenic 60.0%
GATCCCACAGCAGCGATCTG+AGG - chr8.2:29976035-29976054 None:intergenic 60.0%
GCATCCCATACCACTCGGTC+TGG + chr8.2:29977234-29977253 MS.gene28886:intron 60.0%
GCTCGGAAAGGGCTACCAAC+GGG - chr8.2:29977102-29977121 None:intergenic 60.0%
GCTTTCGCCGGAGCATAACG+TGG + chr8.2:29976169-29976188 MS.gene28886:CDS 60.0%
GGCTCGGAAAGGGCTACCAA+CGG - chr8.2:29977103-29977122 None:intergenic 60.0%
GGGTACCAGACCGAGTGGTA+TGG - chr8.2:29977242-29977261 None:intergenic 60.0%
TCAACTCCTTGACGGCAGGG+CGG - chr8.2:29978518-29978537 None:intergenic 60.0%
TCGGAAAGGGCTACCAACGG+GGG - chr8.2:29977100-29977119 None:intergenic 60.0%
! CAGGGCAACTGGGGAGGTTT+TGG + chr8.2:29976139-29976158 MS.gene28886:CDS 60.0%
! GTGGTATGGGATGCTCGGTG+GGG - chr8.2:29977228-29977247 None:intergenic 60.0%
! TTCCCGTGCTGTTCTTGGGC+GGG + chr8.2:29976112-29976131 MS.gene28886:CDS 60.0%
!! CACAACGTGTGGCGGGTGAA+GGG + chr8.2:29976260-29976279 MS.gene28886:CDS 60.0%
!! TGTTCTTGGGCGGGCTGTCA+GGG + chr8.2:29976121-29976140 MS.gene28886:CDS 60.0%
ACCCCTGAGCGCCAATGACC+CGG + chr8.2:29977035-29977054 MS.gene28886:intron 65.0%
AGCCCGCCCAAGAACAGCAC+GGG - chr8.2:29976117-29976136 None:intergenic 65.0%
AGTGTCAGCCGCCGGGTCAT+TGG - chr8.2:29977049-29977068 None:intergenic 65.0%
CAGCCCGCCCAAGAACAGCA+CGG - chr8.2:29976118-29976137 None:intergenic 65.0%
CCAGCTCCCCTCAGTGACAC+AGG - chr8.2:29979787-29979806 None:intergenic 65.0%
CGGAAAGGGCTACCAACGGG+GGG - chr8.2:29977099-29977118 None:intergenic 65.0%
CTCCCCTCAGTGACACAGGG+GGG - chr8.2:29979783-29979802 None:intergenic 65.0%
GCTCCCCTCAGTGACACAGG+GGG - chr8.2:29979784-29979803 None:intergenic 65.0%
GGCTTGGGTACCAGACCGAG+TGG - chr8.2:29977247-29977266 None:intergenic 65.0%
TAGCATCCGCCCTGCCGTCA+AGG + chr8.2:29978509-29978528 MS.gene28886:intron 65.0%
! AGGCCCCCCTGTGTCACTGA+GGG + chr8.2:29979777-29979796 MS.gene28886:CDS 65.0%
! CCTGTGTCACTGAGGGGAGC+TGG + chr8.2:29979784-29979803 MS.gene28886:CDS 65.0%
!! CTGTTCTTGGGCGGGCTGTC+AGG + chr8.2:29976120-29976139 MS.gene28886:CDS 65.0%
!! GCACAACGTGTGGCGGGTGA+AGG + chr8.2:29976259-29976278 MS.gene28886:CDS 65.0%
CCTGAGCGCCAATGACCCGG+CGG + chr8.2:29977038-29977057 MS.gene28886:intron 70.0%
CGCCGGGTCATTGGCGCTCA+GGG - chr8.2:29977040-29977059 None:intergenic 70.0%
GCCGGGTCATTGGCGCTCAG+GGG - chr8.2:29977039-29977058 None:intergenic 70.0%
GGCTGTCAGGGCAACTGGGG+AGG + chr8.2:29976133-29976152 MS.gene28886:CDS 70.0%
GGGTCATTGGCGCTCAGGGG+TGG - chr8.2:29977036-29977055 None:intergenic 70.0%
! CAGGCCCCCCTGTGTCACTG+AGG + chr8.2:29979776-29979795 MS.gene28886:CDS 70.0%
! GCGGGCTGTCAGGGCAACTG+GGG + chr8.2:29976130-29976149 MS.gene28886:CDS 70.0%
! GGCCCCCCTGTGTCACTGAG+GGG + chr8.2:29979778-29979797 MS.gene28886:CDS 70.0%
!! GGCGGGCTGTCAGGGCAACT+GGG + chr8.2:29976129-29976148 MS.gene28886:CDS 70.0%
CCGCCGGGTCATTGGCGCTC+AGG - chr8.2:29977041-29977060 None:intergenic 75.0%
!! GGGCGGGCTGTCAGGGCAAC+TGG + chr8.2:29976128-29976147 MS.gene28886:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 29974856 29979861 29974856 ID=MS.gene28886
chr8.2 mRNA 29974856 29979861 29974856 ID=MS.gene28886.t1;Parent=MS.gene28886
chr8.2 exon 29974856 29975153 29974856 ID=MS.gene28886.t1.exon1;Parent=MS.gene28886.t1
chr8.2 CDS 29974856 29975153 29974856 ID=cds.MS.gene28886.t1;Parent=MS.gene28886.t1
chr8.2 exon 29975925 29976292 29975925 ID=MS.gene28886.t1.exon2;Parent=MS.gene28886.t1
chr8.2 CDS 29975925 29976292 29975925 ID=cds.MS.gene28886.t1;Parent=MS.gene28886.t1
chr8.2 exon 29978948 29979184 29978948 ID=MS.gene28886.t1.exon3;Parent=MS.gene28886.t1
chr8.2 CDS 29978948 29979184 29978948 ID=cds.MS.gene28886.t1;Parent=MS.gene28886.t1
chr8.2 exon 29979601 29979861 29979601 ID=MS.gene28886.t1.exon4;Parent=MS.gene28886.t1
chr8.2 CDS 29979601 29979861 29979601 ID=cds.MS.gene28886.t1;Parent=MS.gene28886.t1
Gene Sequence

>MS.gene28886

ATGGACTTCCTAACTGCCTGTTGGCGGAGAAGATCTTCGGACAGAAAATCATCCGATGTTTGCGGAAAGAAAGAAGGTCTGCTGTGGTACAAAGATGCTGGACAGCATCTCTTTGGTGATTATTCCATGGCGGTTGTGCAGGCTAATAACCTGCTTGAAGATCAGAGTCAGATTGAGTCTGGTCCTCTTAGTTTTCTAGATACTGGTCCTTATGGTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAGACTTCTCGCTTCATTTGCGATCATCTTTTTCAGCATTTAAAACGTAGTAATTTGTTCTAAATTTTATTTTTTTTGGTGAATTTATGTTGTTATTGTGTGTTAATTTAATGGGTTGATGTTGATTGTTTTAAAATGTTTATGGATTTGATTAATTCACTTTAAAGGGGTTAAGTAACTATAGATGACAAAAAATCAACTGTTGATGTGATGTTGCTTACTTGTAGGGATTTGACTCCTCTAGAGACTGAGTAGATAGCTACAAAGCACTGACACACACCTGACATGTCGACATCGGTAGTAATTTAAGAAAATGACATAATTGAATAAAATCACATGTGTCGAAGTCGTGTCGGGCACAAACATTTGTTGGACACTGGACACGTCTTTGATCAGAAGCGTTGGTGCTACAGAAGTAGAGAGAAATGAAAAAGAAAGAAAAAATCAATGGTTGATATTTCGATACACCTTTGATTAGTTATAGTAGTATATGTAATATCAATCATTGATTTATCATCAATGATAGATATTGTTTTCATCAATGATAGATATTGTTTCACTTTACACTCTGAAGTAAGTTGCTCAGTTTACAGGAGTCAGATCCTAATTGTTGTAGTTACTTGATAAATCATTGTTATGGTTTGTTGAAATATACTACCTTGACTTTCTCATAACATGTTTAAAGTGAAATACTCGCTTTAGAGGAGTTGGTTAAATTCATGTTCAATGGTTGATTCTCATTTCATGTTGCTTTGGGACATTTTTGTAGATGTTTTATATGTGTGTTTTTATTTATTTTTTATTTTTTTTATTTAAGGATTTGCGACGGAGCATAAGTCTATGTCTGTGGAGGTTATTCGAAAGGCATATCAAGCCACAGAAGAAGGTTTTCTGGGAGTGGTTACTAAGCACTGGCCTATGAATCCTCAGATCGCTGCTGTGGGATCTTGTTGTTTGGTCGGTGTGATTTGTGGTGGTTCACTGTACATTGCAAACCTCGGTGATTCCCGTGCTGTTCTTGGGCGGGCTGTCAGGGCAACTGGGGAGGTTTTGGCAATCCAGCTTTCGCCGGAGCATAACGTGGCCATAGAGTCTGTTAGACAAGAGATGCATTCCTTGCATCCGGATGACCCGAAAATTGTCGTTCTAAAGCACAACGTGTGGCGGGTGAAGGGTCTAATACAGGTATGTTCTGTAGTGATTGGCATTTTTCATTGTGGCAAGGAATTCAGAATATCATTTTCCCTTATTTTTCAGTCCTATTTTTTTTCTTGGAAATTGGTAAATTTCAACATTTTTTGCAGTATATAAACGTTTCGATTTAATATGTTATTAGACTATGTGTTGTCTTGTCTGTAGTTTTTTCAGCTTAGGGGTATGTTAAGTCACGTTCTCAGTGGTTGACTTCTTGAGAGTATTGATGAATTATGTAGATTGACATCACCTTGCAAGAAGTCATGCGTGCATGGGTTTTTTTGTCCTTTGCAGTCGTCATTCTCATGATTTATATAATTTGCTGATTTATTATATTTGTCTTTTTGTTGGAAAATACAATATTTAAAGTAATTCAACAAATCAAAGCATGGAAGTGAATGTTCTTATTAAATAGTGCACTGCACAATGCCAAAGCTAGAAAAGACTCCAAATTAGGGGTCCTATCCTGTAATTATACAAACAATCTAAACACCATATCTGCCCACTTCATTATGAGAAAGAGGTATCTTTAGAACCACTTGACTCAAACACGGGGAGAATGCCCCAATGAGGCATGCATATTGATCAGTATCTAAGAAATTGGGGAACCCTCCCTTAAAAGCTAGCTATCAAGAGGGAAGAATCAAGCCACTTAAATAATCCACTGAACATCCTATACTACCCGATGTGGGGTTTGAGCACTCCATAATACTCGCACCCCTATCATAGCACCACCCCTGAGCGCCAATGACCCGGCGGCTGACACTTATTGACGCTCAACTCTTTCTGATCAGCCCCCCGTTGGTAGCCCTTTCCGAGCCACCAACAACCAGCTCTGACACCATTTGATAGGTATCTAAGCACTCTGGGAACCCACCCTTAAAACGTAGCTATCAAAGGGGAAGAACCAAGCCATTTAAATACCCCACCGAGCATCCCATACCACTCGGTCTGGTACCCAAGCCCCGATCACATATTTGCATAAAATCACATTAGTGCTATTCCTCATAAGGATTGTTGTCCACTCAAAAGCCTTGATTGTTGAGGGGGCTTTGAACTTTCCATGTGTATGATCTAATACATGAGAGAGTATTTAAAATGATGCAATGCAGCATATAGTTTCAAGTCTACTGAACTGATCTTTCCAACTATTGTTACTCTATTTTCCTCTTAGGATTTCTACATCAAATAATGGGTTCCCTCTCTCTGTCTGGGCCTGTTTTTGTGTTTGAGTTTCTGCTTTTCCAAAGAACATATTTTTAAAAAACTATGACAATTAGATAATGTTTGATTGTTTTCTTTTCCTTCCAAATTAAGCCCCCAGAAAAATTGGTTGTGTTTTTGTGTTGTAAACAGTAGCTTCTAAAAATTAGCTGATTAGAAAAGCGTTTGTTAGAATGAAAAACTCATGCTTCACGTCTGCATTTCATCTATAGAATATCTATAGATTATGCGCAATTGATTCAGAGATAATGTATGTTATTATTAGTTTACAATTACTATGTTCAGGTACCAATCATGTTTGTCATCAGTACAATTGTGTTCTAGATACACACTTCCTCAAACCGTAATTTCATCTTATAAAAGAAGATACCTGAAAGATGCCAAATATAACTCAAAATTCATCTTGTATTAAATGTGCATCTTTTATTCCTTTTGAATTCTTGATGGATATGGTGATCATAAATGTTATTGAGGTAGAGGTCTAGGAATACACATTTTTGAGGTGTTGATGGGATGCTATTCGGTCAGAAATTAATAAAGTAATGATTGAAAATTCTTTCAGTTGATAAATCTGATATTAAAGAACTTATTAATGTGAATTAACTTCATGTTTCGAGGATATTGTCAGCCTCCTATTCCTTAAGAGCGGTGGATATAATCACATTGTGGGTAGACCTTGTATAATTGCAATATAATTCAAGATACGAACCAAATGGGTTTTCGTCACAAAAAGATGTATAGGCTTGGCAACCAAATCTTTTATCGTCATAAAAAGATGTATAGGCGGGTCTGAATTTTTTGCTCGACCTGACCCCTAATTTCATATTGAAATTCACATCCTAGTATCCTATGCACCCAACCTCACTTTTCCGAAGTAAAGAATATGCTAAGTATGGATTGTGGAATGAATGAAGATAAACTATTATATTAGTGACTAAGAAGACCATAACGCTTATTCAAATAATGGACTGTTAGGGAAAACTTAGCATCCGCCCTGCCGTCAAGGAGTTGAGATCCTCTCCATTTCAAAATAAATGGACATCTCCATTACTATAGTTTTGGTGTATAAATGTCCAATTAATATCTCTAATTTGAGAAATATGTGCATTTGTATTTATTTACTTCAAAACTATAGTAATGGAGATGTCCATTTATTTTAAGAAATGGAGAGGATCCCAACCAGCCATTGAGTGGGTTTGGGAAAATTGCCAGCCCTAAGATTTAAGATGTATAGCTTTACTATCTTATCCTGTAGTTGTAGGTTGTATTAAATATTTAATTCTTGATTCAAAGATCTTCCAGCACAGCAAATGAAAGAAGTTTACATAAAGGATCGAAGTTTCTATTGAATTTGGTCTCGTATGATGTTAAATTCTTTGGACTTGCTATTTAGAATGCAACTTATGAATTTTGTGTGTGCAGATTTCTAGATCCATTGGTGACGTATACCTTAAAAAGGCAGAATTTAACAGGGAACCACTGTATGCTAAGTTTCGCCTACGGGAAACTTTCAAAACGCCAATTTTGAGCTCTGACCCATCAATATCTGTTCATGAACTACAAGAGCATGATCAATTTCTGATATTTGCCTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAACCACCCTCACAGTGTAAGATAAATATACTATATGGTTGTTTCTTTTTTGTTTTATGGTTTTTATTGCTTAATTACTATATTATATCCGTTCATGACTGGCTCTTATCTATTCAATAAGTTTCAAATGCGTTAATACTTGAATTTATTGCCTTTTATACATTTAACATGCTTTTACACATGCTAACAAGTCATTACTCTTTTTGTTTAGTTCATGCTATTCTCCCTCATATAAATGATATTGATGGAAGATAAAATGGATAGGCTGTTGATTTCTTTTGTAGCAGGCAAAAGCTGTGACAAATCTTATTTAGGATGCACATTTTGATGGAAAATTGACAATTTTAACTGAAATAAAACACCTTGATAGCAGCTTTAAAGAGTAAAGGATATATGTATTATTGTAGGCATTACATGTTTTCTATTTTGCAGGGGAGTGCTCGGAAGCTGATCAAAGTGGCTTTGCTGGAAGCAGCCAAGAAAAGAGAGATGAGGTACTCTGATCTGAAGAAAATTGACCGAGGTGTCCGTCGTCATTTCCACGACGACATCACCGTTGTAGTTATATTTCTTGACTCGAATCTTGTCAGCAGAGCAAGCACAGTAACAGGCCCCCCTGTGTCACTGAGGGGAGCTGGTGTTCCCCTACCGTCTAGATCTCTGGCACCAATGGAACTTCCAGGTCCTGGCTGA
Protein sequence

>MS.gene28886.t1

MDFLTACWRRRSSDRKSSDVCGKKEGLLWYKDAGQHLFGDYSMAVVQANNLLEDQSQIESGPLSFLDTGPYGTFVGVYDGHGGPETSRFICDHLFQHLKRFATEHKSMSVEVIRKAYQATEEGFLGVVTKHWPMNPQIAAVGSCCLVGVICGGSLYIANLGDSRAVLGRAVRATGEVLAIQLSPEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLRETFKTPILSSDPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARKLIKVALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVIFLDSNLVSRASTVTGPPVSLRGAGVPLPSRSLAPMELPGPG