AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28884

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28884.t1 MTR_8g074930 100.000 387 0 0 1 387 6 392 0.0 801
MS.gene28884.t1 MTR_1g112840 74.674 383 95 1 1 381 6 388 0.0 591
MS.gene28884.t1 MTR_7g081020 75.711 387 90 2 1 384 1 386 0.0 590
MS.gene28884.t1 MTR_8g074930 100.000 280 0 0 108 387 1 280 0.0 572
MS.gene28884.t1 MTR_1g116260 66.033 368 119 1 3 370 9 370 2.45e-180 506
MS.gene28884.t1 MTR_7g081020 77.303 304 65 2 1 301 1 303 5.55e-169 475
MS.gene28884.t1 MTR_1g067210 63.295 346 126 1 25 370 27 371 5.28e-163 462
MS.gene28884.t1 MTR_7g100240 62.155 362 135 2 6 367 4 363 4.10e-160 454
MS.gene28884.t1 MTR_2g033910 58.556 374 141 5 1 369 6 370 8.16e-159 451
MS.gene28884.t1 MTR_0015s0140 49.465 374 170 4 3 368 8 370 2.17e-133 387
MS.gene28884.t1 MTR_1g106855 53.714 350 142 3 4 351 9 340 1.37e-130 380
MS.gene28884.t1 MTR_0015s0140 51.071 280 134 2 89 368 40 316 3.65e-101 303
MS.gene28884.t1 MTR_1g106855 50.993 302 128 3 4 303 9 292 3.98e-101 301
MS.gene28884.t1 MTR_3g032660 45.312 320 160 5 36 349 37 347 1.97e-96 294
MS.gene28884.t1 MTR_3g032700 45.312 320 160 5 36 349 37 347 6.18e-96 293
MS.gene28884.t1 MTR_7g090550 44.880 332 166 6 32 355 35 357 2.57e-90 279
MS.gene28884.t1 MTR_7g090530 45.342 322 159 6 35 349 37 348 3.00e-90 279
MS.gene28884.t1 MTR_3g032590 43.191 257 138 4 99 349 99 353 5.07e-69 224
MS.gene28884.t1 MTR_4g113480 36.232 345 193 7 25 363 34 357 3.61e-64 214
MS.gene28884.t1 MTR_4g113345 33.129 326 177 10 28 349 22 310 1.47e-44 157
MS.gene28884.t1 MTR_7g060770 31.525 295 173 6 74 349 263 547 7.75e-44 160
MS.gene28884.t1 MTR_4g119830 34.749 259 154 5 110 358 245 498 3.68e-41 152
MS.gene28884.t1 MTR_4g076560 33.333 294 174 7 73 352 201 486 9.85e-41 150
MS.gene28884.t1 MTR_4g063905 31.786 280 149 5 110 352 425 699 9.08e-37 142
MS.gene28884.t1 MTR_7g090540 39.303 201 99 5 160 355 5 187 1.34e-34 129
MS.gene28884.t1 MTR_4g098650 30.100 299 150 5 108 352 478 771 1.11e-32 130
MS.gene28884.t1 MTR_4g113210 32.453 265 145 8 27 282 18 257 2.80e-32 122
MS.gene28884.t1 MTR_1g085530 35.955 178 105 3 179 352 715 887 2.13e-26 111
MS.gene28884.t1 MTR_3g464650 29.137 278 139 9 73 348 93 314 1.05e-24 103
MS.gene28884.t1 MTR_1g115570 31.818 242 115 8 74 311 126 321 4.21e-24 102
MS.gene28884.t1 MTR_3g464700 31.081 222 111 7 74 294 118 298 5.78e-23 99.0
MS.gene28884.t1 MTR_3g091060 29.730 222 111 6 76 294 127 306 7.17e-23 99.0
MS.gene28884.t1 MTR_1g014640 30.000 290 137 10 76 361 110 337 2.72e-22 97.1
MS.gene28884.t1 MTR_1g013400 30.000 290 137 10 76 361 110 337 2.72e-22 97.1
MS.gene28884.t1 MTR_5g071550 29.464 224 116 6 74 296 154 336 5.56e-22 96.7
MS.gene28884.t1 MTR_2g078760 28.179 291 133 10 66 348 31 253 9.56e-21 90.9
MS.gene28884.t1 MTR_3g105730 29.197 274 129 9 76 346 67 278 1.45e-20 91.3
MS.gene28884.t1 MTR_2g078760 28.179 291 133 10 66 348 110 332 1.60e-20 92.0
MS.gene28884.t1 MTR_7g025640 32.110 218 109 7 138 351 7 189 1.65e-20 89.0
MS.gene28884.t1 MTR_3g105730 29.197 274 129 9 76 346 45 256 1.79e-20 90.9
MS.gene28884.t1 MTR_2g008850 29.134 254 127 9 74 322 19 224 1.16e-19 87.4
MS.gene28884.t1 MTR_4g094208 27.309 249 140 6 74 321 61 269 2.46e-19 87.4
MS.gene28884.t1 MTR_2g008850 29.134 254 127 9 74 322 65 270 7.51e-19 86.3
MS.gene28884.t1 MTR_5g024340 27.018 285 140 10 70 346 119 343 7.60e-19 87.8
MS.gene28884.t1 MTR_2g033000 26.389 288 149 8 73 350 99 333 2.46e-18 85.9
MS.gene28884.t1 MTR_1g028300 29.643 280 155 7 19 296 92 331 6.86e-18 84.7
MS.gene28884.t1 MTR_4g116420 26.042 288 145 10 73 350 123 352 1.44e-17 84.0
MS.gene28884.t1 MTR_2g040500 27.213 305 156 10 74 348 267 535 2.34e-17 84.0
MS.gene28884.t1 MTR_3g074610 26.214 309 159 10 41 346 37 279 2.67e-17 81.6
MS.gene28884.t1 MTR_5g071550 26.786 224 122 6 73 295 153 335 3.04e-17 82.8
MS.gene28884.t1 MTR_4g094542 25.843 267 151 9 47 311 127 348 4.83e-17 82.0
MS.gene28884.t1 MTR_4g125810 28.755 233 126 6 70 296 249 447 6.78e-17 82.4
MS.gene28884.t1 MTR_3g068200 26.948 308 154 9 65 348 115 375 1.02e-16 81.3
MS.gene28884.t1 MTR_1g014190 24.658 292 134 11 55 296 33 288 1.06e-16 81.3
MS.gene28884.t1 MTR_1g014190 24.658 292 134 11 55 296 71 326 2.55e-16 80.1
MS.gene28884.t1 MTR_3g107880 26.000 300 157 13 69 359 59 302 4.61e-16 79.0
MS.gene28884.t1 MTR_3g107880 26.000 300 157 13 69 359 116 359 5.08e-16 79.3
MS.gene28884.t1 MTR_3g107880 26.000 300 157 13 69 359 117 360 5.25e-16 79.3
MS.gene28884.t1 MTR_7g112490 30.667 225 104 10 142 354 183 367 5.94e-16 79.0
MS.gene28884.t1 MTR_8g463130 28.112 249 123 9 66 306 59 259 6.43e-16 77.8
MS.gene28884.t1 MTR_8g463130 28.112 249 123 9 66 306 31 231 6.70e-16 77.4
MS.gene28884.t1 MTR_7g112490 30.667 225 104 10 142 354 201 385 7.19e-16 79.0
MS.gene28884.t1 MTR_7g093240 32.895 152 60 5 153 299 4 118 1.02e-15 73.6
MS.gene28884.t1 MTR_5g080680 28.033 239 115 5 74 296 132 329 2.09e-15 77.4
MS.gene28884.t1 MTR_1g050520 25.899 278 148 9 76 348 420 644 3.83e-15 77.4
MS.gene28884.t1 MTR_4g007440 24.277 346 174 9 73 374 51 352 5.68e-15 75.9
MS.gene28884.t1 MTR_5g063940 26.909 275 138 10 74 346 19 232 7.58e-15 73.9
MS.gene28884.t1 MTR_2g078760 29.075 227 105 9 66 284 110 288 9.36e-15 74.7
MS.gene28884.t1 MTR_5g063940 26.909 275 138 10 74 346 66 279 1.60e-14 73.6
MS.gene28884.t1 MTR_7g021530 27.439 328 161 14 74 360 129 420 2.03e-14 74.7
MS.gene28884.t1 MTR_7g021530 27.439 328 161 14 74 360 88 379 2.09e-14 74.7
MS.gene28884.t1 MTR_1g086350 25.436 287 153 8 73 350 101 335 2.24e-14 74.3
MS.gene28884.t1 MTR_1g086350 25.524 286 152 8 74 350 118 351 2.26e-14 74.3
MS.gene28884.t1 MTR_7g021530 27.586 319 154 14 74 351 38 320 3.40e-14 73.6
MS.gene28884.t1 MTR_4g123080 28.889 270 131 15 63 312 83 311 6.80e-14 72.8
MS.gene28884.t1 MTR_4g123080 27.308 260 148 9 63 312 101 329 9.19e-14 72.4
MS.gene28884.t1 MTR_1g015110 27.615 239 119 7 74 296 290 490 1.03e-13 72.8
MS.gene28884.t1 MTR_8g017240 32.203 177 85 7 152 319 174 324 1.88e-13 71.6
MS.gene28884.t1 MTR_1g086350 25.088 283 151 8 77 350 19 249 2.30e-13 70.5
MS.gene28884.t1 MTR_4g037470 26.087 253 138 10 111 356 168 378 5.40e-13 70.5
MS.gene28884.t1 MTR_4g037470 26.087 253 138 10 111 356 177 387 6.14e-13 70.5
MS.gene28884.t1 MTR_3g105880 24.830 294 155 9 55 308 33 300 8.37e-13 68.9
MS.gene28884.t1 MTR_6g081850 24.490 294 149 9 77 351 82 321 9.68e-13 68.9
MS.gene28884.t1 MTR_2g090190 27.969 261 139 10 104 357 154 372 2.24e-12 68.6
MS.gene28884.t1 MTR_3g105880 24.911 281 145 9 55 295 33 287 2.36e-12 68.2
MS.gene28884.t1 MTR_2g435550 31.364 220 100 11 142 350 176 355 6.30e-12 66.6
MS.gene28884.t1 MTR_2g435550 31.364 220 100 11 142 350 162 341 6.59e-12 66.6
MS.gene28884.t1 MTR_5g009370 28.696 230 122 7 74 297 87 280 7.70e-12 66.2
MS.gene28884.t1 MTR_7g080170 27.599 279 146 14 110 371 170 409 2.29e-11 65.5
MS.gene28884.t1 MTR_7g080170 27.599 279 146 14 110 371 62 301 3.41e-11 64.7
MS.gene28884.t1 MTR_3g491830 23.887 247 148 9 73 298 88 315 4.36e-11 64.3
MS.gene28884.t1 MTR_4g120410 28.877 187 100 7 142 319 175 337 5.87e-11 63.9
MS.gene28884.t1 MTR_4g013295 27.556 225 107 9 152 368 176 352 6.23e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28884.t1 AT3G51370 77.128 376 83 1 1 376 6 378 0.0 605
MS.gene28884.t1 AT3G51370 77.128 376 83 1 1 376 6 378 0.0 605
MS.gene28884.t1 AT4G38520 70.984 386 110 1 1 384 6 391 0.0 585
MS.gene28884.t1 AT4G38520 70.984 386 110 1 1 384 6 391 0.0 585
MS.gene28884.t1 AT5G66080 73.879 379 96 3 1 376 6 384 0.0 584
MS.gene28884.t1 AT3G12620 65.054 372 127 2 1 370 8 378 0.0 510
MS.gene28884.t1 AT3G12620 65.054 372 127 2 1 370 8 378 0.0 510
MS.gene28884.t1 AT3G55050 60.428 374 137 3 3 371 9 376 2.58e-171 483
MS.gene28884.t1 AT3G55050 60.428 374 137 3 3 371 9 376 2.58e-171 483
MS.gene28884.t1 AT3G51370 73.986 296 73 2 81 376 2 293 3.40e-162 457
MS.gene28884.t1 AT5G66080 75.362 276 68 0 101 376 5 280 7.67e-158 445
MS.gene28884.t1 AT5G02760 61.186 371 139 3 7 377 5 370 1.83e-157 447
MS.gene28884.t1 AT3G17090 56.936 346 137 4 27 369 45 381 9.62e-145 416
MS.gene28884.t1 AT5G06750 55.652 345 141 3 27 368 43 378 1.34e-134 390
MS.gene28884.t1 AT5G06750 55.652 345 141 3 27 368 43 378 1.34e-134 390
MS.gene28884.t1 AT4G33920 53.582 349 144 3 25 363 20 360 2.48e-132 384
MS.gene28884.t1 AT3G17090 55.000 280 116 3 27 305 45 315 5.37e-112 330
MS.gene28884.t1 AT4G33920 53.261 276 119 2 98 363 2 277 1.83e-103 308
MS.gene28884.t1 AT5G06750 51.987 302 135 4 70 368 2 296 4.67e-102 305
MS.gene28884.t1 AT4G33920 53.441 247 105 2 127 363 1 247 6.90e-92 277
MS.gene28884.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28884.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28884.t1 AT3G16560 30.650 323 180 7 74 358 175 491 1.31e-42 155
MS.gene28884.t1 AT3G09400 32.616 279 147 7 105 352 377 645 1.42e-39 149
MS.gene28884.t1 AT5G02400 32.979 282 149 6 102 349 391 666 4.79e-39 148
MS.gene28884.t1 AT1G07630 31.707 287 153 6 103 352 377 657 3.51e-37 142
MS.gene28884.t1 AT2G35350 29.508 305 164 5 99 357 480 779 8.98e-36 139
MS.gene28884.t1 AT2G28890 30.714 280 152 5 110 352 375 649 1.32e-34 135
MS.gene28884.t1 AT3G16560 29.787 282 155 6 74 318 175 450 9.01e-34 130
MS.gene28884.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28884.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28884.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28884.t1 AT2G46920 28.333 300 157 6 110 352 541 839 1.49e-32 130
MS.gene28884.t1 AT3G09400 30.797 276 145 9 105 348 377 638 2.45e-30 123
MS.gene28884.t1 AT1G07160 30.208 288 146 8 63 348 142 376 9.15e-28 113
MS.gene28884.t1 AT2G40180 29.452 292 144 11 67 352 154 389 7.42e-26 107
MS.gene28884.t1 AT1G67820 31.321 265 128 9 38 295 80 297 8.18e-26 108
MS.gene28884.t1 AT1G67820 31.321 265 128 9 38 295 116 333 1.13e-25 108
MS.gene28884.t1 AT2G30020 30.108 279 131 9 76 348 172 392 2.49e-24 103
MS.gene28884.t1 AT4G31750 29.661 236 125 6 76 309 66 262 1.97e-22 97.1
MS.gene28884.t1 AT4G31750 29.536 237 126 6 76 310 66 263 2.20e-22 96.7
MS.gene28884.t1 AT4G31750 29.536 237 126 6 76 310 66 263 2.20e-22 96.7
MS.gene28884.t1 AT1G43900 31.200 250 117 11 68 309 148 350 6.43e-22 96.7
MS.gene28884.t1 AT5G53140 27.801 241 128 7 76 312 134 332 2.40e-21 95.5
MS.gene28884.t1 AT5G53140 27.801 241 128 7 76 312 134 332 2.40e-21 95.5
MS.gene28884.t1 AT5G10740 29.218 243 126 7 74 312 64 264 4.85e-21 93.6
MS.gene28884.t1 AT5G10740 29.218 243 126 7 74 312 64 264 4.85e-21 93.6
MS.gene28884.t1 AT2G33700 29.682 283 130 11 72 346 121 342 1.90e-20 92.4
MS.gene28884.t1 AT5G24940 29.098 244 125 8 74 312 64 264 6.20e-20 91.7
MS.gene28884.t1 AT4G28400 29.600 250 126 11 74 317 45 250 2.86e-19 87.0
MS.gene28884.t1 AT4G28400 29.960 247 123 11 77 317 70 272 4.70e-19 87.0
MS.gene28884.t1 AT2G25620 26.641 259 149 8 67 320 122 344 1.63e-18 86.7
MS.gene28884.t1 AT2G25620 26.641 259 149 8 67 320 122 344 1.63e-18 86.7
MS.gene28884.t1 AT2G20630 28.854 253 129 10 66 312 56 263 2.07e-18 85.1
MS.gene28884.t1 AT2G20630 28.854 253 129 10 66 312 56 263 2.58e-18 84.7
MS.gene28884.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28884.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28884.t1 AT1G34750 26.582 316 166 12 34 348 31 281 6.16e-18 83.6
MS.gene28884.t1 AT4G08260 27.574 272 110 10 76 346 21 206 8.81e-18 81.6
MS.gene28884.t1 AT4G26080 27.526 287 160 9 74 348 172 422 1.09e-17 84.7
MS.gene28884.t1 AT1G07430 28.163 245 108 6 74 296 157 355 3.94e-17 83.2
MS.gene28884.t1 AT3G51470 27.273 286 133 11 72 346 104 325 2.92e-16 79.7
MS.gene28884.t1 AT5G26010 28.814 295 161 10 71 350 66 326 3.65e-16 79.3
MS.gene28884.t1 AT3G51470 27.273 286 133 11 72 346 60 281 4.14e-16 79.0
MS.gene28884.t1 AT5G57050 27.622 286 162 9 74 348 120 371 5.08e-16 79.3
MS.gene28884.t1 AT5G59220 29.832 238 110 7 74 296 148 343 5.27e-16 79.3
MS.gene28884.t1 AT5G57050 27.622 286 162 9 74 348 160 411 5.42e-16 79.7
MS.gene28884.t1 AT1G78200 27.273 253 127 9 76 317 21 227 7.95e-16 76.6
MS.gene28884.t1 AT1G78200 27.273 253 127 9 76 317 21 227 7.95e-16 76.6
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 202 406 1.57e-15 78.6
MS.gene28884.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28884.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28884.t1 AT1G78200 26.148 283 158 11 41 317 35 272 1.67e-15 76.6
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 206 410 1.71e-15 78.2
MS.gene28884.t1 AT3G62260 27.381 252 136 8 74 312 27 244 1.92e-15 76.6
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 96 300 2.33e-15 77.4
MS.gene28884.t1 AT1G48040 28.070 285 148 11 74 350 116 351 2.45e-15 77.4
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 136 340 2.92e-15 77.4
MS.gene28884.t1 AT1G79630 30.894 246 114 13 128 358 136 340 2.92e-15 77.4
MS.gene28884.t1 AT2G25070 25.418 299 151 13 55 311 33 301 3.21e-15 76.6
MS.gene28884.t1 AT2G25070 25.418 299 151 13 55 311 33 301 3.21e-15 76.6
MS.gene28884.t1 AT3G62260 27.888 251 136 8 74 312 116 333 3.23e-15 77.0
MS.gene28884.t1 AT3G62260 27.888 251 136 8 74 312 117 334 3.24e-15 77.0
MS.gene28884.t1 AT3G15260 26.481 287 139 10 66 346 66 286 3.69e-15 75.9
MS.gene28884.t1 AT3G15260 26.481 287 139 10 66 346 66 286 3.69e-15 75.9
MS.gene28884.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28884.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28884.t1 AT3G16800 25.763 295 162 11 73 348 92 348 5.85e-15 75.9
MS.gene28884.t1 AT1G17550 27.778 252 123 9 70 296 231 448 9.66e-15 76.3
MS.gene28884.t1 AT1G17550 27.778 252 123 9 70 296 231 448 9.66e-15 76.3
MS.gene28884.t1 AT1G18030 26.970 330 179 13 4 314 48 334 1.65e-14 74.7
MS.gene28884.t1 AT2G34740 23.985 271 147 6 76 346 121 332 1.71e-14 74.3
MS.gene28884.t1 AT1G22280 26.462 325 161 14 32 346 28 284 2.45e-14 73.2
MS.gene28884.t1 AT3G16800 27.753 227 114 9 134 348 65 253 3.21e-14 72.4
MS.gene28884.t1 AT3G16800 27.753 227 114 9 134 348 65 253 3.21e-14 72.4
MS.gene28884.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28884.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28884.t1 AT1G72770 25.497 302 164 8 72 348 236 501 3.51e-14 74.3
MS.gene28884.t1 AT4G31860 24.042 287 152 7 55 301 33 293 7.51e-14 72.0
MS.gene28884.t1 AT1G34750 26.336 262 145 10 34 294 31 245 9.87e-14 70.9
MS.gene28884.t1 AT3G11410 28.137 263 114 9 74 311 137 349 1.34e-13 72.0
MS.gene28884.t1 AT1G03590 27.673 318 162 12 73 357 89 371 1.44e-13 72.4
MS.gene28884.t1 AT1G22280 25.472 318 167 11 32 346 28 278 1.91e-13 70.5
MS.gene28884.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28884.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28884.t1 AT3G05640 30.137 219 100 11 142 348 172 349 2.32e-13 71.2
MS.gene28884.t1 AT1G16220 28.755 233 113 11 130 349 185 377 2.99e-13 71.6
MS.gene28884.t1 AT3G17250 26.421 299 139 12 74 351 158 396 1.10e-12 69.3
MS.gene28884.t1 AT5G27930 28.899 218 102 10 142 347 177 353 1.67e-12 68.6
MS.gene28884.t1 AT5G27930 28.899 218 102 10 142 347 177 353 1.67e-12 68.6
MS.gene28884.t1 AT5G36250 29.249 253 135 9 142 387 207 422 3.02e-12 68.2
MS.gene28884.t1 AT1G18030 27.477 222 113 9 77 284 112 299 1.36e-11 65.5
MS.gene28884.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28884.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28884.t1 AT4G03415 26.899 316 168 13 73 356 96 380 2.19e-11 65.5
MS.gene28884.t1 AT4G31860 25.989 177 97 4 142 314 160 306 2.38e-11 65.1
MS.gene28884.t1 AT2G34740 25.000 208 117 5 77 284 118 286 4.92e-11 63.5
MS.gene28884.t1 AT4G32950 25.676 296 154 13 72 349 70 317 4.96e-11 63.9
MS.gene28884.t1 AT2G34740 25.000 208 117 5 77 284 136 304 6.36e-11 63.5

Find 109 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCGGGCTGTCAGGGCAAC+TGG 0.169978 8.2:+29939887 MS.gene28884:CDS
GGTGATTCCCGTGCTGTTCT+TGG 0.209661 8.2:+29939866 MS.gene28884:CDS
CTGTTCTTGGGCGGGCTGTC+AGG 0.232915 8.2:+29939879 MS.gene28884:CDS
CAGGGCAACTGGGGAGGTTT+TGG 0.241199 8.2:+29939898 MS.gene28884:CDS
TATTTGCCTCTGATGGTCTT+TGG 0.284448 8.2:+29942867 MS.gene28884:CDS
TTTCTAGATACTGGTCCTTA+TGG 0.291779 8.2:+29938807 MS.gene28884:CDS
GCTGATCAAAGTGGCTTTGC+TGG 0.294250 8.2:+29943374 MS.gene28884:CDS
ATTTGCCTCTGATGGTCTTT+GGG 0.306722 8.2:+29942868 MS.gene28884:CDS
TGGTGACGTATACCTTAAAA+AGG 0.353640 8.2:+29942721 MS.gene28884:CDS
GATGGGTCAGAGCTCAAAAT+TGG 0.354169 8.2:-29942803 None:intergenic
AGCAGAGCAAGCACAGTAAC+AGG 0.357274 8.2:+29943516 MS.gene28884:CDS
TGCTGTGGGATCTTGTTGTT+TGG 0.369159 8.2:+29939802 MS.gene28884:CDS
CCTGTGTCACTGAGGGGAGC+TGG 0.383832 8.2:+29943543 MS.gene28884:CDS
CTGGCACCAATGGAACTTCC+AGG 0.385848 8.2:+29943588 MS.gene28884:CDS
CTCTTGTCTAACAGACTCTA+TGG 0.388711 8.2:-29939951 None:intergenic
GTGATTCCCGTGCTGTTCTT+GGG 0.405392 8.2:+29939867 MS.gene28884:CDS
GATGCTGGACAGCATCTCTT+TGG 0.416248 8.2:+29938708 MS.gene28884:CDS
GGCTGTCAGGGCAACTGGGG+AGG 0.418778 8.2:+29939892 MS.gene28884:CDS
TTCCCGTGCTGTTCTTGGGC+GGG 0.423445 8.2:+29939871 MS.gene28884:CDS
TTGGGAACACCTTAGCAATC+AGG 0.424837 8.2:+29942886 MS.gene28884:CDS
CGAAGATCTTCTCCGCCAAC+AGG 0.427699 8.2:-29938631 None:intergenic
GGCGGGCTGTCAGGGCAACT+GGG 0.430283 8.2:+29939888 MS.gene28884:CDS
CGTTATGCTCCGGCGAAAGC+TGG 0.431768 8.2:-29939925 None:intergenic
TGTTCTTGGGCGGGCTGTCA+GGG 0.432328 8.2:+29939880 MS.gene28884:CDS
TTTCTGATATTTGCCTCTGA+TGG 0.449916 8.2:+29942860 MS.gene28884:CDS
TGTTTGGTCGGTGTGATTTG+TGG 0.462687 8.2:+29939818 MS.gene28884:CDS
TCCCCTACCGTCTAGATCTC+TGG 0.468407 8.2:+29943569 MS.gene28884:CDS
TTATTCCATGGCGGTTGTGC+AGG 0.470210 8.2:+29938734 MS.gene28884:CDS
TTCTCCGCCAACAGGCAGTT+AGG 0.472119 8.2:-29938623 None:intergenic
AGTTCATGAACAGATATTGA+TGG 0.473558 8.2:-29942821 None:intergenic
GCAGCGATCTGAGGATTCAT+AGG 0.487144 8.2:-29939782 None:intergenic
TGGGAGTGGTTACTAAGCAC+TGG 0.488272 8.2:+29939759 MS.gene28884:CDS
GATCAGAGTCAGATTGAGTC+TGG 0.489235 8.2:+29938774 MS.gene28884:CDS
GTTGGTGTTTATGATGGTCA+TGG 0.489495 8.2:+29938837 MS.gene28884:CDS
GCACAACGTGTGGCGGGTGA+AGG 0.490325 8.2:+29940018 MS.gene28884:CDS
CTGTTGGCGGAGAAGATCTT+CGG 0.491080 8.2:+29938632 MS.gene28884:CDS
CCAATGGAACTTCCAGGTCC+TGG 0.492643 8.2:+29943594 MS.gene28884:CDS
GTCTAGATCTCTGGCACCAA+TGG 0.503834 8.2:+29943578 MS.gene28884:CDS
AGAGATGCATTCCTTGCATC+CGG 0.504191 8.2:+29939970 MS.gene28884:CDS
CCAGCTCCCCTCAGTGACAC+AGG 0.506179 8.2:-29943543 None:intergenic
CCAGGACCTGGAAGTTCCAT+TGG 0.507568 8.2:-29943594 None:intergenic
GCATATCAAGCCACAGAAGA+AGG 0.508277 8.2:+29939731 MS.gene28884:CDS
GTGGGATCTTGTTGTTTGGT+CGG 0.514582 8.2:+29939806 MS.gene28884:CDS
ATTCCCGTGCTGTTCTTGGG+CGG 0.514589 8.2:+29939870 MS.gene28884:CDS
GTATGCTAAGTTTCGCCTAC+GGG 0.516750 8.2:+29942766 MS.gene28884:CDS
TGCCAGAGATCTAGACGGTA+GGG 0.519564 8.2:-29943571 None:intergenic
GCGGGCTGTCAGGGCAACTG+GGG 0.520374 8.2:+29939889 MS.gene28884:CDS
TTCTTTCTTTCCGCAAACAT+CGG 0.526800 8.2:-29938667 None:intergenic
GCGGGTGAAGGGTCTAATAC+AGG 0.528896 8.2:+29940030 MS.gene28884:CDS
TTTGGCAATCCAGCTTTCGC+CGG 0.531684 8.2:+29939916 MS.gene28884:CDS
CAGCCACATCAGCCAGGACC+TGG 0.534031 8.2:-29943606 None:intergenic
TCTCTTTGGTGATTATTCCA+TGG 0.537286 8.2:+29938722 MS.gene28884:CDS
ACACCAACAAAAGTACCATA+AGG 0.538409 8.2:-29938822 None:intergenic
TTTAAGGTATACGTCACCAA+TGG 0.540169 8.2:-29942717 None:intergenic
CTGCTGTGGTACAAAGATGC+TGG 0.541265 8.2:+29938693 MS.gene28884:CDS
CACAACGTGTGGCGGGTGAA+GGG 0.546014 8.2:+29940019 MS.gene28884:CDS
TTCTAAAGCACAACGTGTGG+CGG 0.549441 8.2:+29940011 MS.gene28884:CDS
AGCCCGCCCAAGAACAGCAC+GGG 0.549498 8.2:-29939873 None:intergenic
TCTAAAGCACAACGTGTGGC+GGG 0.553137 8.2:+29940012 MS.gene28884:CDS
TTTCGGGTCATCCGGATGCA+AGG 0.553848 8.2:-29939981 None:intergenic
ATCATACAGCCACATCAGCC+AGG 0.556821 8.2:-29943612 None:intergenic
CAAATGAAGCGAGAAGTCTC+AGG 0.560587 8.2:-29938864 None:intergenic
GAATCCTCAGATCGCTGCTG+TGG 0.560810 8.2:+29939787 MS.gene28884:CDS
CAGCTCCCCTCAGTGACACA+GGG 0.561408 8.2:-29943542 None:intergenic
GTTCATGAACAGATATTGAT+GGG 0.564983 8.2:-29942820 None:intergenic
ACTTCCTAACTGCCTGTTGG+CGG 0.568998 8.2:+29938619 MS.gene28884:CDS
GTCTGTGGAGGTTATTCGAA+AGG 0.570871 8.2:+29939709 MS.gene28884:CDS
GTGCAGATTTCTAGATCCAT+TGG 0.570962 8.2:+29942701 MS.gene28884:intron
CAACAGCATCCTGATTGCTA+AGG 0.571092 8.2:-29942895 None:intergenic
TCTGACTCTGATCTTCAAGC+AGG 0.572462 8.2:-29938764 None:intergenic
ATATTTATCTTACACTGTGA+GGG 0.575409 8.2:-29942934 None:intergenic
CCAGTATCTAGAAAACTAAG+AGG 0.576069 8.2:-29938798 None:intergenic
GATGTTTGCGGAAAGAAAGA+AGG 0.576694 8.2:+29938669 MS.gene28884:CDS
TGGACTTCCTAACTGCCTGT+TGG 0.580966 8.2:+29938616 MS.gene28884:CDS
TCCCAGAAAACCTTCTTCTG+TGG 0.582092 8.2:-29939741 None:intergenic
AGAAAATCATCCGATGTTTG+CGG 0.582622 8.2:+29938657 MS.gene28884:CDS
TGTATGCTAAGTTTCGCCTA+CGG 0.583341 8.2:+29942765 MS.gene28884:CDS
GATCCCACAGCAGCGATCTG+AGG 0.585680 8.2:-29939791 None:intergenic
CAGCCCGCCCAAGAACAGCA+CGG 0.596746 8.2:-29939874 None:intergenic
GTGCCAGAGATCTAGACGGT+AGG 0.597354 8.2:-29943572 None:intergenic
ATTAGCCTGCACAACCGCCA+TGG 0.605073 8.2:-29938739 None:intergenic
TTTATCTTACACTGTGAGGG+TGG 0.608136 8.2:-29942931 None:intergenic
TATATTTATCTTACACTGTG+AGG 0.610993 8.2:-29942935 None:intergenic
CTCCCCTCAGTGACACAGGG+GGG 0.613428 8.2:-29943539 None:intergenic
GCTCCCCTCAGTGACACAGG+GGG 0.615642 8.2:-29943540 None:intergenic
AATCCTCAGATCGCTGCTGT+GGG 0.623833 8.2:+29939788 MS.gene28884:CDS
GCCAGAGATCTAGACGGTAG+GGG 0.626299 8.2:-29943570 None:intergenic
GTGTTCCCAAAGACCATCAG+AGG 0.629985 8.2:-29942873 None:intergenic
CAGCCAAGAAAAGAGAGATG+AGG 0.639513 8.2:+29943400 MS.gene28884:CDS
TTGGTCGGTGTGATTTGTGG+TGG 0.641640 8.2:+29939821 MS.gene28884:CDS
TCGTTCTAAAGCACAACGTG+TGG 0.642320 8.2:+29940008 MS.gene28884:CDS
GGAGCATAAGTCTATGTCTG+TGG 0.645363 8.2:+29939694 MS.gene28884:CDS
GCATAAGTCTATGTCTGTGG+AGG 0.647360 8.2:+29939697 MS.gene28884:CDS
GTCAAGAAATATAACTACAA+CGG 0.650696 8.2:-29943481 None:intergenic
CTTTGGTGATTATTCCATGG+CGG 0.657160 8.2:+29938725 MS.gene28884:CDS
TGCTCGGAAGCTGATCAAAG+TGG 0.660495 8.2:+29943365 MS.gene28884:CDS
GCTTTCGCCGGAGCATAACG+TGG 0.662934 8.2:+29939928 MS.gene28884:CDS
CTACAACGGTGATGTCGTCG+TGG 0.663620 8.2:-29943467 None:intergenic
TCTATGGCCACGTTATGCTC+CGG 0.666513 8.2:-29939935 None:intergenic
AGCTCCCCTCAGTGACACAG+GGG 0.673101 8.2:-29943541 None:intergenic
GGAAATGACGACGGACACCT+CGG 0.676569 8.2:-29943446 None:intergenic
TCACTGTACATTGCAAACCT+CGG 0.676865 8.2:+29939845 MS.gene28884:CDS
GAAAGAAAGAAGGTCTGCTG+TGG 0.683737 8.2:+29938679 MS.gene28884:CDS
GGTGTTTATGATGGTCATGG+TGG 0.696441 8.2:+29938840 MS.gene28884:CDS
AGGCGAAACTTAGCATACAG+TGG 0.711073 8.2:-29942761 None:intergenic
ATTGGTGCCAGAGATCTAGA+CGG 0.715928 8.2:-29943576 None:intergenic
GATCTGAAGAAAATTGACCG+AGG 0.731520 8.2:+29943429 MS.gene28884:CDS
TGTCGTCGTGGAAATGACGA+CGG 0.744392 8.2:-29943455 None:intergenic
GAACAGCACGGGAATCACCG+AGG 0.758772 8.2:-29939862 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTTTTATTTA+AGG + chr8.2:29939662-29939681 MS.gene28884:intron 0.0%
!!! GTTCTAAATTTTATTTTTTT+TGG + chr8.2:29938923-29938942 MS.gene28884:intron 10.0%
!!! TTTTTTAAAAATATGTTCTT+TGG - chr8.2:29941308-29941327 None:intergenic 10.0%
!! AAAAAGAAAGAAAAAATCAA+TGG + chr8.2:29939295-29939314 MS.gene28884:intron 15.0%
!! AATTATATTGCAATTATACA+AGG - chr8.2:29941962-29941981 None:intergenic 15.0%
!! ATTTGATTAATTCACTTTAA+AGG + chr8.2:29939012-29939031 MS.gene28884:intron 15.0%
!! TGAATTTCAATATGAAATTA+GGG - chr8.2:29942100-29942119 None:intergenic 15.0%
!! TGTAAGATAAATATACTATA+TGG + chr8.2:29942943-29942962 MS.gene28884:intron 15.0%
!! TTATTGTGTGTTAATTTAAT+GGG + chr8.2:29938959-29938978 MS.gene28884:intron 15.0%
!! TTTGATTAATTCACTTTAAA+GGG + chr8.2:29939013-29939032 MS.gene28884:intron 15.0%
!!! TATTATATTTGTCTTTTTGT+TGG + chr8.2:29940389-29940408 MS.gene28884:intron 15.0%
!!! TCTTTTATAAGATGAAATTA+CGG - chr8.2:29941629-29941648 None:intergenic 15.0%
!!! TGATTGTTTTAAAATGTTTA+TGG + chr8.2:29938989-29939008 MS.gene28884:intron 15.0%
!! AAAAATAGGACTGAAAAATA+AGG - chr8.2:29940114-29940133 None:intergenic 20.0%
!! AAAATAGGACTGAAAAATAA+GGG - chr8.2:29940113-29940132 None:intergenic 20.0%
!! AAGCATGTTAAATGTATAAA+AGG - chr8.2:29943082-29943101 None:intergenic 20.0%
!! AAGGATATATGTATTATTGT+AGG + chr8.2:29943313-29943332 MS.gene28884:intron 20.0%
!! ATACTACTATAACTAATCAA+AGG - chr8.2:29939337-29939356 None:intergenic 20.0%
!! CAATTTCCAAGAAAAAAAAT+AGG - chr8.2:29940128-29940147 None:intergenic 20.0%
!! CATCAATATCATTTATATGA+GGG - chr8.2:29943155-29943174 None:intergenic 20.0%
!! CTCAAATTAGAGATATTAAT+TGG - chr8.2:29942361-29942380 None:intergenic 20.0%
!! GAATTTCAATATGAAATTAG+GGG - chr8.2:29942099-29942118 None:intergenic 20.0%
!! GTGAATTTCAATATGAAATT+AGG - chr8.2:29942101-29942120 None:intergenic 20.0%
!! GTTATTGTGTGTTAATTTAA+TGG + chr8.2:29938958-29938977 MS.gene28884:intron 20.0%
!! TACTTGATAAATCATTGTTA+TGG + chr8.2:29939484-29939503 MS.gene28884:intron 20.0%
!! TAGATTGTTTGTATAATTAC+AGG - chr8.2:29940529-29940548 None:intergenic 20.0%
!! TCTCCATTTCTTAAAATAAA+TGG - chr8.2:29942435-29942454 None:intergenic 20.0%
!! TTACTTCAAAACTATAGTAA+TGG + chr8.2:29942403-29942422 MS.gene28884:intron 20.0%
!!! ATTTATTTTAAGAAATGGAG+AGG + chr8.2:29942434-29942453 MS.gene28884:intron 20.0%
!!! ATTTTATGCAAATATGTGAT+CGG - chr8.2:29941029-29941048 None:intergenic 20.0%
!!! CTATTTTTTTTCTTGGAAAT+TGG + chr8.2:29940126-29940145 MS.gene28884:intron 20.0%
!!! GATGAATTTTGAGTTATATT+TGG - chr8.2:29941668-29941687 None:intergenic 20.0%
!!! GTTGTTTCTTTTTTGTTTTA+TGG + chr8.2:29942965-29942984 MS.gene28884:intron 20.0%
!!! TGTCCATTTATTTTAAGAAA+TGG + chr8.2:29942429-29942448 MS.gene28884:intron 20.0%
!!! TTGATTAATTCACTTTAAAG+GGG + chr8.2:29939014-29939033 MS.gene28884:intron 20.0%
!!! TTTTATGACGATAAAAGATT+TGG - chr8.2:29942038-29942057 None:intergenic 20.0%
! ACTTAGCATATTCTTTACTT+CGG - chr8.2:29942157-29942176 None:intergenic 25.0%
! AGCTATACATCTTAAATCTT+AGG - chr8.2:29942501-29942520 None:intergenic 25.0%
! AGGATTTCTACATCAAATAA+TGG + chr8.2:29941233-29941252 MS.gene28884:intron 25.0%
! AGTAAAGAATATGCTAAGTA+TGG + chr8.2:29942158-29942177 MS.gene28884:intron 25.0%
! AGTTTACAATTACTATGTTC+AGG + chr8.2:29941548-29941567 MS.gene28884:intron 25.0%
! ATACACCAAAACTATAGTAA+TGG - chr8.2:29942332-29942351 None:intergenic 25.0%
! ATATCCATCAAGAATTCAAA+AGG - chr8.2:29941716-29941735 None:intergenic 25.0%
! ATATTTATCTTACACTGTGA+GGG - chr8.2:29942937-29942956 None:intergenic 25.0%
! ATCAAGTAACTACAACAATT+AGG - chr8.2:29939472-29939491 None:intergenic 25.0%
! ATCGAAGTTTCTATTGAATT+TGG + chr8.2:29942617-29942636 MS.gene28884:intron 25.0%
! ATCGTCATAAAAAGATGTAT+AGG + chr8.2:29942046-29942065 MS.gene28884:intron 25.0%
! CATAACGCTTATTCAAATAA+TGG + chr8.2:29942229-29942248 MS.gene28884:intron 25.0%
! CATTATTTGAATAAGCGTTA+TGG - chr8.2:29942231-29942250 None:intergenic 25.0%
! CCATCAATATCATTTATATG+AGG - chr8.2:29943156-29943175 None:intergenic 25.0%
! CCTCATATAAATGATATTGA+TGG + chr8.2:29943153-29943172 MS.gene28884:intron 25.0%
! GAAAATAGAGTAACAATAGT+TGG - chr8.2:29941208-29941227 None:intergenic 25.0%
! GATATTGATGGAAGATAAAA+TGG + chr8.2:29943165-29943184 MS.gene28884:intron 25.0%
! GCTATACATCTTAAATCTTA+GGG - chr8.2:29942500-29942519 None:intergenic 25.0%
! GGATTTCTACATCAAATAAT+GGG + chr8.2:29941234-29941253 MS.gene28884:intron 25.0%
! GTCAAGAAATATAACTACAA+CGG - chr8.2:29943484-29943503 None:intergenic 25.0%
! TAAAAAGGCAGAATTTAACA+GGG + chr8.2:29942736-29942755 MS.gene28884:CDS 25.0%
! TAATTCAACAAATCAAAGCA+TGG + chr8.2:29940430-29940449 MS.gene28884:intron 25.0%
! TATATTTATCTTACACTGTG+AGG - chr8.2:29942938-29942957 None:intergenic 25.0%
! TCGTATGATGTTAAATTCTT+TGG + chr8.2:29942642-29942661 MS.gene28884:intron 25.0%
! TGATCAGTATCTAAGAAATT+GGG + chr8.2:29940643-29940662 MS.gene28884:intron 25.0%
! TGTTTGTATAATTACAGGAT+AGG - chr8.2:29940524-29940543 None:intergenic 25.0%
! TTAAAAAGGCAGAATTTAAC+AGG + chr8.2:29942735-29942754 MS.gene28884:CDS 25.0%
! TTGATCAGTATCTAAGAAAT+TGG + chr8.2:29940642-29940661 MS.gene28884:intron 25.0%
! TTGGTTAAATTCATGTTCAA+TGG + chr8.2:29939574-29939593 MS.gene28884:intron 25.0%
!! AAAAACACAACCAATTTTTC+TGG - chr8.2:29941384-29941403 None:intergenic 25.0%
!! AAAACACAACCAATTTTTCT+GGG - chr8.2:29941383-29941402 None:intergenic 25.0%
!! TACATGTTTTCTATTTTGCA+GGG + chr8.2:29943339-29943358 MS.gene28884:intron 25.0%
!! TATTCCTTTTGAATTCTTGA+TGG + chr8.2:29941709-29941728 MS.gene28884:intron 25.0%
!! TGTTAAATTCTGCCTTTTTA+AGG - chr8.2:29942736-29942755 None:intergenic 25.0%
!! TTACATGTTTTCTATTTTGC+AGG + chr8.2:29943338-29943357 MS.gene28884:intron 25.0%
!! TTTTATGCAAATATGTGATC+GGG - chr8.2:29941028-29941047 None:intergenic 25.0%
!!! ATTCAAATAATGGACTGTTA+GGG + chr8.2:29942239-29942258 MS.gene28884:intron 25.0%
!!! GATGTCCATTTATTTTGAAA+TGG - chr8.2:29942308-29942327 None:intergenic 25.0%
!!! TATTCAAATAATGGACTGTT+AGG + chr8.2:29942238-29942257 MS.gene28884:intron 25.0%
!!! TTCAGTCCTATTTTTTTTCT+TGG + chr8.2:29940119-29940138 MS.gene28884:intron 25.0%
!!! TTTTATTTAAGGATTTGCGA+CGG + chr8.2:29939673-29939692 MS.gene28884:intron 25.0%
!!! TTTTGAATTCTTGATGGATA+TGG + chr8.2:29941715-29941734 MS.gene28884:intron 25.0%
AACATGTTATGAGAAAGTCA+AGG - chr8.2:29939527-29939546 None:intergenic 30.0%
AATTCAAGATACGAACCAAA+TGG + chr8.2:29941978-29941997 MS.gene28884:intron 30.0%
AGAAACTCAAACACAAAAAC+AGG - chr8.2:29941279-29941298 None:intergenic 30.0%
AGTTATATTTGGCATCTTTC+AGG - chr8.2:29941657-29941676 None:intergenic 30.0%
AGTTCATGAACAGATATTGA+TGG - chr8.2:29942824-29942843 None:intergenic 30.0%
ATATTATATCCGTTCATGAC+TGG + chr8.2:29943007-29943026 MS.gene28884:intron 30.0%
ATTCAAGATACGAACCAAAT+GGG + chr8.2:29941979-29941998 MS.gene28884:intron 30.0%
CATAAATGTTATTGAGGTAG+AGG + chr8.2:29941742-29941761 MS.gene28884:intron 30.0%
CATGTATTAGATCATACACA+TGG - chr8.2:29941125-29941144 None:intergenic 30.0%
CCTCTCCATTTCAAAATAAA+TGG + chr8.2:29942300-29942319 MS.gene28884:intron 30.0%
CTAGAAAAGACTCCAAATTA+GGG + chr8.2:29940496-29940515 MS.gene28884:intron 30.0%
CTTAAAACGTAGCTATCAAA+GGG + chr8.2:29940939-29940958 MS.gene28884:intron 30.0%
GATCAGTATCTAAGAAATTG+GGG + chr8.2:29940644-29940663 MS.gene28884:intron 30.0%
GGTGATCATAAATGTTATTG+AGG + chr8.2:29941736-29941755 MS.gene28884:intron 30.0%
GTCATAAAAAGATGTATAGG+CGG + chr8.2:29942049-29942068 MS.gene28884:intron 30.0%
GTTCATGAACAGATATTGAT+GGG - chr8.2:29942823-29942842 None:intergenic 30.0%
TAAGATGAAATTACGGTTTG+AGG - chr8.2:29941622-29941641 None:intergenic 30.0%
TAGAAAAGACTCCAAATTAG+GGG + chr8.2:29940497-29940516 MS.gene28884:intron 30.0%
TCATAAAAAGATGTATAGGC+GGG + chr8.2:29942050-29942069 MS.gene28884:intron 30.0%
TGAATTAACTTCATGTTTCG+AGG + chr8.2:29941880-29941899 MS.gene28884:intron 30.0%
TGATGGAAGATAAAATGGAT+AGG + chr8.2:29943170-29943189 MS.gene28884:intron 30.0%
TTAAAACGTAGCTATCAAAG+GGG + chr8.2:29940940-29940959 MS.gene28884:intron 30.0%
TTAAAAGCTAGCTATCAAGA+GGG + chr8.2:29940676-29940695 MS.gene28884:intron 30.0%
TTAATACAACCTACAACTAC+AGG - chr8.2:29942536-29942555 None:intergenic 30.0%
TTCGTCACAAAAAGATGTAT+AGG + chr8.2:29942004-29942023 MS.gene28884:intron 30.0%
TTTATGCAAATATGTGATCG+GGG - chr8.2:29941027-29941046 None:intergenic 30.0%
TTTGATGTAGAAATCCTAAG+AGG - chr8.2:29941230-29941249 None:intergenic 30.0%
! AAACACAACCAATTTTTCTG+GGG - chr8.2:29941382-29941401 None:intergenic 30.0%
! AATATGCTAAGTATGGATTG+TGG + chr8.2:29942165-29942184 MS.gene28884:intron 30.0%
! ACATGTTTTCTATTTTGCAG+GGG + chr8.2:29943340-29943359 MS.gene28884:intron 30.0%
! AGCTGTGACAAATCTTATTT+AGG + chr8.2:29943220-29943239 MS.gene28884:intron 30.0%
! ATTCTCATTTCATGTTGCTT+TGG + chr8.2:29939600-29939619 MS.gene28884:intron 30.0%
! CATCTCCATTACTATAGTTT+TGG + chr8.2:29942324-29942343 MS.gene28884:intron 30.0%
! TCTAGGAATACACATTTTTG+AGG + chr8.2:29941765-29941784 MS.gene28884:intron 30.0%
! TGTTACTCTATTTTCCTCTT+AGG + chr8.2:29941213-29941232 MS.gene28884:intron 30.0%
!! ACTTTTGTTGGTGTTTATGA+TGG + chr8.2:29938831-29938850 MS.gene28884:CDS 30.0%
!! ATAGCAGCTTTAAAGAGTAA+AGG + chr8.2:29943294-29943313 MS.gene28884:intron 30.0%
!! ATTTAGGATGCACATTTTGA+TGG + chr8.2:29943236-29943255 MS.gene28884:intron 30.0%
!! CTTTGATAGCTACGTTTTAA+GGG - chr8.2:29940940-29940959 None:intergenic 30.0%
!! TGTTCAGTGGATTATTTAAG+TGG - chr8.2:29940712-29940731 None:intergenic 30.0%
!! TTCTCATTTCATGTTGCTTT+GGG + chr8.2:29939601-29939620 MS.gene28884:intron 30.0%
!!! CCATTTATTTTGAAATGGAG+AGG - chr8.2:29942303-29942322 None:intergenic 30.0%
!!! TCTGTAGTTTTTTCAGCTTA+GGG + chr8.2:29940219-29940238 MS.gene28884:intron 30.0%
!!! TCTTGATAGCTAGCTTTTAA+GGG - chr8.2:29940676-29940695 None:intergenic 30.0%
!!! TGCTTTAGAACGACAATTTT+CGG - chr8.2:29940001-29940020 None:intergenic 30.0%
AAGTAAGTTGCTCAGTTTAC+AGG + chr8.2:29939438-29939457 MS.gene28884:intron 35.0%
AAGTGAAATACTCGCTTTAG+AGG + chr8.2:29939549-29939568 MS.gene28884:intron 35.0%
AATTAAGCCCCCAGAAAAAT+TGG + chr8.2:29941371-29941390 MS.gene28884:intron 35.0%
ACCTCTTTCTCATAATGAAG+TGG - chr8.2:29940566-29940585 None:intergenic 35.0%
AGAAAATCATCCGATGTTTG+CGG + chr8.2:29938657-29938676 MS.gene28884:CDS 35.0%
ATCAATATGCATGCCTCATT+GGG - chr8.2:29940627-29940646 None:intergenic 35.0%
CACAAAAAGATGTATAGGCT+TGG + chr8.2:29942009-29942028 MS.gene28884:intron 35.0%
CCAGTATCTAGAAAACTAAG+AGG - chr8.2:29938801-29938820 None:intergenic 35.0%
CCTCTTTCTCATAATGAAGT+GGG - chr8.2:29940565-29940584 None:intergenic 35.0%
CCTTAAAACGTAGCTATCAA+AGG + chr8.2:29940938-29940957 MS.gene28884:intron 35.0%
CTATCTTATCCTGTAGTTGT+AGG + chr8.2:29942524-29942543 MS.gene28884:intron 35.0%
CTTAAAAGCTAGCTATCAAG+AGG + chr8.2:29940675-29940694 MS.gene28884:intron 35.0%
GCTAGAAAAGACTCCAAATT+AGG + chr8.2:29940495-29940514 MS.gene28884:intron 35.0%
GGTGGATATAATCACATTGT+GGG + chr8.2:29941932-29941951 MS.gene28884:intron 35.0%
GTGCTTAGATACCTATCAAA+TGG - chr8.2:29940905-29940924 None:intergenic 35.0%
TACATCTTAAATCTTAGGGC+TGG - chr8.2:29942496-29942515 None:intergenic 35.0%
TCAAAAGCCTTGATTGTTGA+GGG + chr8.2:29941086-29941105 MS.gene28884:intron 35.0%
TCAATATGAAATTAGGGGTC+AGG - chr8.2:29942094-29942113 None:intergenic 35.0%
TTCTTTACTTCGGAAAAGTG+AGG - chr8.2:29942147-29942166 None:intergenic 35.0%
TTCTTTCTTTCCGCAAACAT+CGG - chr8.2:29938670-29938689 None:intergenic 35.0%
TTTCTAGATACTGGTCCTTA+TGG + chr8.2:29938807-29938826 MS.gene28884:CDS 35.0%
TTTCTGATATTTGCCTCTGA+TGG + chr8.2:29942860-29942879 MS.gene28884:CDS 35.0%
! AACACAACCAATTTTTCTGG+GGG - chr8.2:29941381-29941400 None:intergenic 35.0%
! ATGTGATGTTGCTTACTTGT+AGG + chr8.2:29939072-29939091 MS.gene28884:intron 35.0%
! CATTAGTGCTATTCCTCATA+AGG + chr8.2:29941051-29941070 MS.gene28884:intron 35.0%
! GTACTGATGACAAACATGAT+TGG - chr8.2:29941576-29941595 None:intergenic 35.0%
! GTGATTGGCATTTTTCATTG+TGG + chr8.2:29940064-29940083 MS.gene28884:intron 35.0%
! TCTCTTTGGTGATTATTCCA+TGG + chr8.2:29938722-29938741 MS.gene28884:CDS 35.0%
! TGGTGACGTATACCTTAAAA+AGG + chr8.2:29942721-29942740 MS.gene28884:CDS 35.0%
! TGTGATGTTGCTTACTTGTA+GGG + chr8.2:29939073-29939092 MS.gene28884:intron 35.0%
! TTTAAGGTATACGTCACCAA+TGG - chr8.2:29942720-29942739 None:intergenic 35.0%
! TTTTGTGACGAAAACCCATT+TGG - chr8.2:29941996-29942015 None:intergenic 35.0%
!! ACACCAACAAAAGTACCATA+AGG - chr8.2:29938825-29938844 None:intergenic 35.0%
!! ACTCTTTAAAGCTGCTATCA+AGG - chr8.2:29943292-29943311 None:intergenic 35.0%
!! ATTTTTCTGGGGGCTTAATT+TGG - chr8.2:29941371-29941390 None:intergenic 35.0%
!! CCTCTTAGTTTTCTAGATAC+TGG + chr8.2:29938798-29938817 MS.gene28884:CDS 35.0%
!! CCTTTGATAGCTACGTTTTA+AGG - chr8.2:29940941-29940960 None:intergenic 35.0%
!!! ACACATTTTTGAGGTGTTGA+TGG + chr8.2:29941774-29941793 MS.gene28884:intron 35.0%
!!! CACATTTTTGAGGTGTTGAT+GGG + chr8.2:29941775-29941794 MS.gene28884:intron 35.0%
!!! CTCTTGATAGCTAGCTTTTA+AGG - chr8.2:29940677-29940696 None:intergenic 35.0%
!!! CTGTAGTTTTTTCAGCTTAG+GGG + chr8.2:29940220-29940239 MS.gene28884:intron 35.0%
!!! CTGTTGATTTCTTTTGTAGC+AGG + chr8.2:29943193-29943212 MS.gene28884:intron 35.0%
!!! GCTTTAGAACGACAATTTTC+GGG - chr8.2:29940000-29940019 None:intergenic 35.0%
!!! GTCTGTAGTTTTTTCAGCTT+AGG + chr8.2:29940218-29940237 MS.gene28884:intron 35.0%
!!! TTTGGAGTCTTTTCTAGCTT+TGG - chr8.2:29940493-29940512 None:intergenic 35.0%
AAAAGCCTTGATTGTTGAGG+GGG + chr8.2:29941088-29941107 MS.gene28884:intron 40.0%
AGAACCACTTGACTCAAACA+CGG + chr8.2:29940592-29940611 MS.gene28884:intron 40.0%
AGATAAGAGCCAGTCATGAA+CGG - chr8.2:29943019-29943038 None:intergenic 40.0%
AGTGGACAACAATCCTTATG+AGG - chr8.2:29941067-29941086 None:intergenic 40.0%
ATGTTAAGTCACGTTCTCAG+TGG + chr8.2:29940244-29940263 MS.gene28884:intron 40.0%
ATTTGCCTCTGATGGTCTTT+GGG + chr8.2:29942868-29942887 MS.gene28884:CDS 40.0%
CAAAAGCCTTGATTGTTGAG+GGG + chr8.2:29941087-29941106 MS.gene28884:intron 40.0%
CAGGTATGTTCTGTAGTGAT+TGG + chr8.2:29940049-29940068 MS.gene28884:intron 40.0%
CATAATGAAGTGGGCAGATA+TGG - chr8.2:29940556-29940575 None:intergenic 40.0%
CCCACTTCATTATGAGAAAG+AGG + chr8.2:29940562-29940581 MS.gene28884:intron 40.0%
CGGTGGATATAATCACATTG+TGG + chr8.2:29941931-29941950 MS.gene28884:intron 40.0%
CTCAAAAGCCTTGATTGTTG+AGG + chr8.2:29941085-29941104 MS.gene28884:intron 40.0%
CTCTTGTCTAACAGACTCTA+TGG - chr8.2:29939954-29939973 None:intergenic 40.0%
GATAGGTATCTAAGCACTCT+GGG + chr8.2:29940908-29940927 MS.gene28884:intron 40.0%
GATCAATATGCATGCCTCAT+TGG - chr8.2:29940628-29940647 None:intergenic 40.0%
GATCTGAAGAAAATTGACCG+AGG + chr8.2:29943429-29943448 MS.gene28884:CDS 40.0%
GATGTTTGCGGAAAGAAAGA+AGG + chr8.2:29938669-29938688 MS.gene28884:CDS 40.0%
GATTATATCCACCGCTCTTA+AGG - chr8.2:29941925-29941944 None:intergenic 40.0%
TACTTCGGAAAAGTGAGGTT+GGG - chr8.2:29942142-29942161 None:intergenic 40.0%
TATTTGCCTCTGATGGTCTT+TGG + chr8.2:29942867-29942886 MS.gene28884:CDS 40.0%
TCAATATGCATGCCTCATTG+GGG - chr8.2:29940626-29940645 None:intergenic 40.0%
TCACTGTACATTGCAAACCT+CGG + chr8.2:29939845-29939864 MS.gene28884:CDS 40.0%
TGATAGGTATCTAAGCACTC+TGG + chr8.2:29940907-29940926 MS.gene28884:intron 40.0%
TGTATGCTAAGTTTCGCCTA+CGG + chr8.2:29942765-29942784 MS.gene28884:CDS 40.0%
TGTTATTGAGGTAGAGGTCT+AGG + chr8.2:29941748-29941767 MS.gene28884:intron 40.0%
TTACTTCGGAAAAGTGAGGT+TGG - chr8.2:29942143-29942162 None:intergenic 40.0%
TTTATCTTACACTGTGAGGG+TGG - chr8.2:29942934-29942953 None:intergenic 40.0%
! ATTTTCCCAAACCCACTCAA+TGG - chr8.2:29942471-29942490 None:intergenic 40.0%
! CAACAATCAAGGCTTTTGAG+TGG - chr8.2:29941085-29941104 None:intergenic 40.0%
! CACAAACATTTGTTGGACAC+TGG + chr8.2:29939224-29939243 MS.gene28884:intron 40.0%
! CTTTGGTGATTATTCCATGG+CGG + chr8.2:29938725-29938744 MS.gene28884:CDS 40.0%
! GGTCCTTATGGTACTTTTGT+TGG + chr8.2:29938819-29938838 MS.gene28884:CDS 40.0%
! GTACCTCATCTCTCTTTTCT+TGG - chr8.2:29943406-29943425 None:intergenic 40.0%
! GTGCAGATTTCTAGATCCAT+TGG + chr8.2:29942701-29942720 MS.gene28884:intron 40.0%
! GTTGGTGTTTATGATGGTCA+TGG + chr8.2:29938837-29938856 MS.gene28884:CDS 40.0%
! TGGCATTTTTCATTGTGGCA+AGG + chr8.2:29940069-29940088 MS.gene28884:intron 40.0%
!! AATACTCGCTTTAGAGGAGT+TGG + chr8.2:29939555-29939574 MS.gene28884:intron 40.0%
!! ACTTCTTTCATTTGCTGTGC+TGG - chr8.2:29942586-29942605 None:intergenic 40.0%
!!! GATAGCTACGTTTTAAGGGT+GGG - chr8.2:29940936-29940955 None:intergenic 40.0%
!!! GATAGCTAGCTTTTAAGGGA+GGG - chr8.2:29940672-29940691 None:intergenic 40.0%
!!! TGATAGCTACGTTTTAAGGG+TGG - chr8.2:29940937-29940956 None:intergenic 40.0%
!!! TGATAGCTAGCTTTTAAGGG+AGG - chr8.2:29940673-29940692 None:intergenic 40.0%
AAAAGTGAGGTTGGGTGCAT+AGG - chr8.2:29942134-29942153 None:intergenic 45.0%
AACCACTTGACTCAAACACG+GGG + chr8.2:29940594-29940613 MS.gene28884:intron 45.0%
ACAGGATAGGACCCCTAATT+TGG - chr8.2:29940511-29940530 None:intergenic 45.0%
ACATCCTATACTACCCGATG+TGG + chr8.2:29940729-29940748 MS.gene28884:intron 45.0%
AGAGATGCATTCCTTGCATC+CGG + chr8.2:29939970-29939989 MS.gene28884:CDS 45.0%
AGAGGATCTCAACTCCTTGA+CGG - chr8.2:29942285-29942304 None:intergenic 45.0%
AGCCTCCTATTCCTTAAGAG+CGG + chr8.2:29941911-29941930 MS.gene28884:intron 45.0%
AGGCGAAACTTAGCATACAG+TGG - chr8.2:29942764-29942783 None:intergenic 45.0%
ATCCACCGCTCTTAAGGAAT+AGG - chr8.2:29941919-29941938 None:intergenic 45.0%
ATCCTATACTACCCGATGTG+GGG + chr8.2:29940731-29940750 MS.gene28884:intron 45.0%
CAAATATGTGATCGGGGCTT+GGG - chr8.2:29941021-29941040 None:intergenic 45.0%
CAAATGAAGCGAGAAGTCTC+AGG - chr8.2:29938867-29938886 None:intergenic 45.0%
CAACAGCATCCTGATTGCTA+AGG - chr8.2:29942898-29942917 None:intergenic 45.0%
CAGCCAAGAAAAGAGAGATG+AGG + chr8.2:29943400-29943419 MS.gene28884:CDS 45.0%
CATCCTATACTACCCGATGT+GGG + chr8.2:29940730-29940749 MS.gene28884:intron 45.0%
CATGAGAATGACGACTGCAA+AGG - chr8.2:29940349-29940368 None:intergenic 45.0%
GAAAGAAAGAAGGTCTGCTG+TGG + chr8.2:29938679-29938698 MS.gene28884:CDS 45.0%
GAACCACTTGACTCAAACAC+GGG + chr8.2:29940593-29940612 MS.gene28884:intron 45.0%
GATCAGAGTCAGATTGAGTC+TGG + chr8.2:29938774-29938793 MS.gene28884:CDS 45.0%
GATGGGTCAGAGCTCAAAAT+TGG - chr8.2:29942806-29942825 None:intergenic 45.0%
GCATAAGTCTATGTCTGTGG+AGG + chr8.2:29939697-29939716 MS.gene28884:CDS 45.0%
GCATATCAAGCCACAGAAGA+AGG + chr8.2:29939731-29939750 MS.gene28884:CDS 45.0%
GCTATCTACTCAGTCTCTAG+AGG - chr8.2:29939107-29939126 None:intergenic 45.0%
GGAGCATAAGTCTATGTCTG+TGG + chr8.2:29939694-29939713 MS.gene28884:CDS 45.0%
GGGTAGTATAGGATGTTCAG+TGG - chr8.2:29940725-29940744 None:intergenic 45.0%
GGTGTTTATGATGGTCATGG+TGG + chr8.2:29938840-29938859 MS.gene28884:CDS 45.0%
GTATGCTAAGTTTCGCCTAC+GGG + chr8.2:29942766-29942785 MS.gene28884:CDS 45.0%
GTCTGTGGAGGTTATTCGAA+AGG + chr8.2:29939709-29939728 MS.gene28884:CDS 45.0%
TCCCAGAAAACCTTCTTCTG+TGG - chr8.2:29939744-29939763 None:intergenic 45.0%
TCTGACTCTGATCTTCAAGC+AGG - chr8.2:29938767-29938786 None:intergenic 45.0%
TGTCGGGCACAAACATTTGT+TGG + chr8.2:29939217-29939236 MS.gene28884:intron 45.0%
TGTTTGGTCGGTGTGATTTG+TGG + chr8.2:29939818-29939837 MS.gene28884:CDS 45.0%
TTGGGAACACCTTAGCAATC+AGG + chr8.2:29942886-29942905 MS.gene28884:CDS 45.0%
! ACGTCTTTGATCAGAAGCGT+TGG + chr8.2:29939249-29939268 MS.gene28884:intron 45.0%
! AGCCACAGAAGAAGGTTTTC+TGG + chr8.2:29939739-29939758 MS.gene28884:CDS 45.0%
! CAGCTCTGACACCATTTGAT+AGG + chr8.2:29940891-29940910 MS.gene28884:intron 45.0%
! CTATCAAATGGTGTCAGAGC+TGG - chr8.2:29940893-29940912 None:intergenic 45.0%
! GCCACAGAAGAAGGTTTTCT+GGG + chr8.2:29939740-29939759 MS.gene28884:CDS 45.0%
! GGTGGGGTATTTAAATGGCT+TGG - chr8.2:29940971-29940990 None:intergenic 45.0%
! TGATAGGGGTGCGAGTATTA+TGG - chr8.2:29940767-29940786 None:intergenic 45.0%
! TGCTCGGTGGGGTATTTAAA+TGG - chr8.2:29940976-29940995 None:intergenic 45.0%
! TTCTGGGGGCTTAATTTGGA+AGG - chr8.2:29941367-29941386 None:intergenic 45.0%
!! AGAAGAAGGTTTTCTGGGAG+TGG + chr8.2:29939745-29939764 MS.gene28884:CDS 45.0%
!! ATTGGTGCCAGAGATCTAGA+CGG - chr8.2:29943579-29943598 None:intergenic 45.0%
!! GGTGTTGATGGGATGCTATT+CGG + chr8.2:29941786-29941805 MS.gene28884:intron 45.0%
!! GTGGGATCTTGTTGTTTGGT+CGG + chr8.2:29939806-29939825 MS.gene28884:CDS 45.0%
!! TCGTTCTAAAGCACAACGTG+TGG + chr8.2:29940008-29940027 MS.gene28884:CDS 45.0%
!! TGCTGTGGGATCTTGTTGTT+TGG + chr8.2:29939802-29939821 MS.gene28884:CDS 45.0%
!! TTCTAAAGCACAACGTGTGG+CGG + chr8.2:29940011-29940030 MS.gene28884:CDS 45.0%
!!! ACGACAATTTTCGGGTCATC+CGG - chr8.2:29939992-29940011 None:intergenic 45.0%
!!! GCGTTTTGAAAGTTTCCCGT+AGG - chr8.2:29942784-29942803 None:intergenic 45.0%
AAACCCACTCAATGGCTGGT+TGG - chr8.2:29942463-29942482 None:intergenic 50.0%
AACCCCACATCGGGTAGTAT+AGG - chr8.2:29940736-29940755 None:intergenic 50.0%
AATCCTCAGATCGCTGCTGT+GGG + chr8.2:29939788-29939807 MS.gene28884:CDS 50.0%
ACATGTGTCGAAGTCGTGTC+GGG + chr8.2:29939201-29939220 MS.gene28884:intron 50.0%
ACTACCGATGTCGACATGTC+AGG - chr8.2:29939149-29939168 None:intergenic 50.0%
ACTTCCTAACTGCCTGTTGG+CGG + chr8.2:29938619-29938638 MS.gene28884:CDS 50.0%
AGCAGAGCAAGCACAGTAAC+AGG + chr8.2:29943516-29943535 MS.gene28884:CDS 50.0%
ATCCCAACCAGCCATTGAGT+GGG + chr8.2:29942457-29942476 MS.gene28884:intron 50.0%
ATCTCAACTCCTTGACGGCA+GGG - chr8.2:29942280-29942299 None:intergenic 50.0%
CAAAGCCCCCTCAACAATCA+AGG - chr8.2:29941096-29941115 None:intergenic 50.0%
CACACCTGACATGTCGACAT+CGG + chr8.2:29939142-29939161 MS.gene28884:intron 50.0%
CACATGTGTCGAAGTCGTGT+CGG + chr8.2:29939200-29939219 MS.gene28884:intron 50.0%
CACCGCTCTTAAGGAATAGG+AGG - chr8.2:29941916-29941935 None:intergenic 50.0%
CTCCTATTCCTTAAGAGCGG+TGG + chr8.2:29941914-29941933 MS.gene28884:intron 50.0%
CTGCTGTGGTACAAAGATGC+TGG + chr8.2:29938693-29938712 MS.gene28884:CDS 50.0%
CTGTTGGCGGAGAAGATCTT+CGG + chr8.2:29938632-29938651 MS.gene28884:CDS 50.0%
GATGCTGGACAGCATCTCTT+TGG + chr8.2:29938708-29938727 MS.gene28884:CDS 50.0%
GCAAATATGTGATCGGGGCT+TGG - chr8.2:29941022-29941041 None:intergenic 50.0%
GCAAGAAGTCATGCGTGCAT+GGG + chr8.2:29940314-29940333 MS.gene28884:intron 50.0%
GCAGCGATCTGAGGATTCAT+AGG - chr8.2:29939785-29939804 None:intergenic 50.0%
GGTTGGGTGCATAGGATACT+AGG - chr8.2:29942126-29942145 None:intergenic 50.0%
GTCTAGATCTCTGGCACCAA+TGG + chr8.2:29943578-29943597 MS.gene28884:CDS 50.0%
GTGTTCCCAAAGACCATCAG+AGG - chr8.2:29942876-29942895 None:intergenic 50.0%
TCTATGGCCACGTTATGCTC+CGG - chr8.2:29939938-29939957 None:intergenic 50.0%
TGCAAGAAGTCATGCGTGCA+TGG + chr8.2:29940313-29940332 MS.gene28884:intron 50.0%
TGCACGCATGACTTCTTGCA+AGG - chr8.2:29940313-29940332 None:intergenic 50.0%
TGCCAGAGATCTAGACGGTA+GGG - chr8.2:29943574-29943593 None:intergenic 50.0%
TGCTCGGAAGCTGATCAAAG+TGG + chr8.2:29943365-29943384 MS.gene28884:CDS 50.0%
TGGACTTCCTAACTGCCTGT+TGG + chr8.2:29938616-29938635 MS.gene28884:CDS 50.0%
TGGGAGTGGTTACTAAGCAC+TGG + chr8.2:29939759-29939778 MS.gene28884:CDS 50.0%
TGTCGTCGTGGAAATGACGA+CGG - chr8.2:29943458-29943477 None:intergenic 50.0%
TTATTCCATGGCGGTTGTGC+AGG + chr8.2:29938734-29938753 MS.gene28884:CDS 50.0%
TTTGGCAATCCAGCTTTCGC+CGG + chr8.2:29939916-29939935 MS.gene28884:CDS 50.0%
! AACCAGCCATTGAGTGGGTT+TGG + chr8.2:29942462-29942481 MS.gene28884:intron 50.0%
! AACCCACTCAATGGCTGGTT+GGG - chr8.2:29942462-29942481 None:intergenic 50.0%
! ACCAGCCATTGAGTGGGTTT+GGG + chr8.2:29942463-29942482 MS.gene28884:intron 50.0%
! ATGGTGTCAGAGCTGGTTGT+TGG - chr8.2:29940886-29940905 None:intergenic 50.0%
! GCTGATCAAAGTGGCTTTGC+TGG + chr8.2:29943374-29943393 MS.gene28884:CDS 50.0%
! GTGATTCCCGTGCTGTTCTT+GGG + chr8.2:29939867-29939886 MS.gene28884:CDS 50.0%
! TCTAAAGCACAACGTGTGGC+GGG + chr8.2:29940012-29940031 MS.gene28884:CDS 50.0%
! TTGGTCGGTGTGATTTGTGG+TGG + chr8.2:29939821-29939840 MS.gene28884:CDS 50.0%
!! TCAGGGGTGGTGCTATGATA+GGG - chr8.2:29940782-29940801 None:intergenic 50.0%
!!! CTATTTTGCAGGGGAGTGCT+CGG + chr8.2:29943349-29943368 MS.gene28884:intron 50.0%
AAACAGGCCCAGACAGAGAG+AGG - chr8.2:29941263-29941282 None:intergenic 55.0%
AACAGGCCCAGACAGAGAGA+GGG - chr8.2:29941262-29941281 None:intergenic 55.0%
ACCGAGCATCCCATACCACT+CGG + chr8.2:29940988-29941007 MS.gene28884:intron 55.0%
ACCGAGTGGTATGGGATGCT+CGG - chr8.2:29940992-29941011 None:intergenic 55.0%
AGTGGTATGGGATGCTCGGT+GGG - chr8.2:29940988-29941007 None:intergenic 55.0%
ATGGGTTCCCTCTCTCTGTC+TGG + chr8.2:29941252-29941271 MS.gene28884:intron 55.0%
CCAATGGAACTTCCAGGTCC+TGG + chr8.2:29943594-29943613 MS.gene28884:CDS 55.0%
CCAGGACCTGGAAGTTCCAT+TGG - chr8.2:29943597-29943616 None:intergenic 55.0%
CGAAGATCTTCTCCGCCAAC+AGG - chr8.2:29938634-29938653 None:intergenic 55.0%
CGTCAATAAGTGTCAGCCGC+CGG - chr8.2:29940816-29940835 None:intergenic 55.0%
CTACAACGGTGATGTCGTCG+TGG - chr8.2:29943470-29943489 None:intergenic 55.0%
CTCCCCGTGTTTGAGTCAAG+TGG - chr8.2:29940599-29940618 None:intergenic 55.0%
CTGGCACCAATGGAACTTCC+AGG + chr8.2:29943588-29943607 MS.gene28884:CDS 55.0%
GAATCCTCAGATCGCTGCTG+TGG + chr8.2:29939787-29939806 MS.gene28884:CDS 55.0%
GAGTGCTCAAACCCCACATC+GGG - chr8.2:29940745-29940764 None:intergenic 55.0%
GATCCCAACCAGCCATTGAG+TGG + chr8.2:29942456-29942475 MS.gene28884:intron 55.0%
GATCTCAACTCCTTGACGGC+AGG - chr8.2:29942281-29942300 None:intergenic 55.0%
GCCAGAGATCTAGACGGTAG+GGG - chr8.2:29943573-29943592 None:intergenic 55.0%
GCGGGTGAAGGGTCTAATAC+AGG + chr8.2:29940030-29940049 MS.gene28884:CDS 55.0%
GGAAATGACGACGGACACCT+CGG - chr8.2:29943449-29943468 None:intergenic 55.0%
GGTACCAGACCGAGTGGTAT+GGG - chr8.2:29941000-29941019 None:intergenic 55.0%
GTCAATAAGTGTCAGCCGCC+GGG - chr8.2:29940815-29940834 None:intergenic 55.0%
GTGCCAGAGATCTAGACGGT+AGG - chr8.2:29943575-29943594 None:intergenic 55.0%
GTGTCAGAGCTGGTTGTTGG+TGG - chr8.2:29940883-29940902 None:intergenic 55.0%
TCCCAAACCCACTCAATGGC+TGG - chr8.2:29942467-29942486 None:intergenic 55.0%
TCCCCTACCGTCTAGATCTC+TGG + chr8.2:29943569-29943588 MS.gene28884:CDS 55.0%
TGGGTTCCCTCTCTCTGTCT+GGG + chr8.2:29941253-29941272 MS.gene28884:intron 55.0%
TTCTCCGCCAACAGGCAGTT+AGG - chr8.2:29938626-29938645 None:intergenic 55.0%
! ATTAGCCTGCACAACCGCCA+TGG - chr8.2:29938742-29938761 None:intergenic 55.0%
! ATTCCCGTGCTGTTCTTGGG+CGG + chr8.2:29939870-29939889 MS.gene28884:CDS 55.0%
! GGAGTGCTCAAACCCCACAT+CGG - chr8.2:29940746-29940765 None:intergenic 55.0%
! GGTGATTCCCGTGCTGTTCT+TGG + chr8.2:29939866-29939885 MS.gene28884:CDS 55.0%
! TTTCGGGTCATCCGGATGCA+AGG - chr8.2:29939984-29940003 None:intergenic 55.0%
!! AGAGCTGGTTGTTGGTGGCT+CGG - chr8.2:29940878-29940897 None:intergenic 55.0%
!! CAGGGGTGGTGCTATGATAG+GGG - chr8.2:29940781-29940800 None:intergenic 55.0%
!! CTCAGGGGTGGTGCTATGAT+AGG - chr8.2:29940783-29940802 None:intergenic 55.0%
!! GGTTGTTGGTGGCTCGGAAA+GGG - chr8.2:29940872-29940891 None:intergenic 55.0%
!! TGGTTGTTGGTGGCTCGGAA+AGG - chr8.2:29940873-29940892 None:intergenic 55.0%
ACGGGGAGAATGCCCCAATG+AGG + chr8.2:29940611-29940630 MS.gene28884:intron 60.0%
AGCTCCCCTCAGTGACACAG+GGG - chr8.2:29943544-29943563 None:intergenic 60.0%
CAGCTCCCCTCAGTGACACA+GGG - chr8.2:29943545-29943564 None:intergenic 60.0%
CGTTATGCTCCGGCGAAAGC+TGG - chr8.2:29939928-29939947 None:intergenic 60.0%
CTCGGAAAGGGCTACCAACG+GGG - chr8.2:29940860-29940879 None:intergenic 60.0%
CTTTCTGATCAGCCCCCCGT+TGG + chr8.2:29940843-29940862 MS.gene28884:intron 60.0%
GAACAGCACGGGAATCACCG+AGG - chr8.2:29939865-29939884 None:intergenic 60.0%
GAACTTCCAGGTCCTGGCTG+AGG + chr8.2:29943600-29943619 MS.gene28884:CDS 60.0%
GAGTGGTATGGGATGCTCGG+TGG - chr8.2:29940989-29941008 None:intergenic 60.0%
GATCCCACAGCAGCGATCTG+AGG - chr8.2:29939794-29939813 None:intergenic 60.0%
GCATCCCATACCACTCGGTC+TGG + chr8.2:29940993-29941012 MS.gene28884:intron 60.0%
GCTCGGAAAGGGCTACCAAC+GGG - chr8.2:29940861-29940880 None:intergenic 60.0%
GCTTTCGCCGGAGCATAACG+TGG + chr8.2:29939928-29939947 MS.gene28884:CDS 60.0%
GGCTCGGAAAGGGCTACCAA+CGG - chr8.2:29940862-29940881 None:intergenic 60.0%
GGGTACCAGACCGAGTGGTA+TGG - chr8.2:29941001-29941020 None:intergenic 60.0%
TCAACTCCTTGACGGCAGGG+CGG - chr8.2:29942277-29942296 None:intergenic 60.0%
TCGGAAAGGGCTACCAACGG+GGG - chr8.2:29940859-29940878 None:intergenic 60.0%
! CAGGGCAACTGGGGAGGTTT+TGG + chr8.2:29939898-29939917 MS.gene28884:CDS 60.0%
! GTGGTATGGGATGCTCGGTG+GGG - chr8.2:29940987-29941006 None:intergenic 60.0%
! TTCCCGTGCTGTTCTTGGGC+GGG + chr8.2:29939871-29939890 MS.gene28884:CDS 60.0%
!! CACAACGTGTGGCGGGTGAA+GGG + chr8.2:29940019-29940038 MS.gene28884:CDS 60.0%
!! TGTTCTTGGGCGGGCTGTCA+GGG + chr8.2:29939880-29939899 MS.gene28884:CDS 60.0%
ACCCCTGAGCGCCAATGACC+CGG + chr8.2:29940794-29940813 MS.gene28884:intron 65.0%
AGCCCGCCCAAGAACAGCAC+GGG - chr8.2:29939876-29939895 None:intergenic 65.0%
AGTGTCAGCCGCCGGGTCAT+TGG - chr8.2:29940808-29940827 None:intergenic 65.0%
CAGCCCGCCCAAGAACAGCA+CGG - chr8.2:29939877-29939896 None:intergenic 65.0%
CCAGCTCCCCTCAGTGACAC+AGG - chr8.2:29943546-29943565 None:intergenic 65.0%
CGGAAAGGGCTACCAACGGG+GGG - chr8.2:29940858-29940877 None:intergenic 65.0%
CTCCCCTCAGTGACACAGGG+GGG - chr8.2:29943542-29943561 None:intergenic 65.0%
GCTCCCCTCAGTGACACAGG+GGG - chr8.2:29943543-29943562 None:intergenic 65.0%
GGCTTGGGTACCAGACCGAG+TGG - chr8.2:29941006-29941025 None:intergenic 65.0%
TAGCATCCGCCCTGCCGTCA+AGG + chr8.2:29942268-29942287 MS.gene28884:intron 65.0%
! AGGCCCCCCTGTGTCACTGA+GGG + chr8.2:29943536-29943555 MS.gene28884:CDS 65.0%
! CCTGTGTCACTGAGGGGAGC+TGG + chr8.2:29943543-29943562 MS.gene28884:CDS 65.0%
!! CTGTTCTTGGGCGGGCTGTC+AGG + chr8.2:29939879-29939898 MS.gene28884:CDS 65.0%
!! GCACAACGTGTGGCGGGTGA+AGG + chr8.2:29940018-29940037 MS.gene28884:CDS 65.0%
CCTGAGCGCCAATGACCCGG+CGG + chr8.2:29940797-29940816 MS.gene28884:intron 70.0%
CGCCGGGTCATTGGCGCTCA+GGG - chr8.2:29940799-29940818 None:intergenic 70.0%
GCCGGGTCATTGGCGCTCAG+GGG - chr8.2:29940798-29940817 None:intergenic 70.0%
GGCTGTCAGGGCAACTGGGG+AGG + chr8.2:29939892-29939911 MS.gene28884:CDS 70.0%
GGGTCATTGGCGCTCAGGGG+TGG - chr8.2:29940795-29940814 None:intergenic 70.0%
! CAGGCCCCCCTGTGTCACTG+AGG + chr8.2:29943535-29943554 MS.gene28884:CDS 70.0%
! GCGGGCTGTCAGGGCAACTG+GGG + chr8.2:29939889-29939908 MS.gene28884:CDS 70.0%
! GGCCCCCCTGTGTCACTGAG+GGG + chr8.2:29943537-29943556 MS.gene28884:CDS 70.0%
!! GGCGGGCTGTCAGGGCAACT+GGG + chr8.2:29939888-29939907 MS.gene28884:CDS 70.0%
CCGCCGGGTCATTGGCGCTC+AGG - chr8.2:29940800-29940819 None:intergenic 75.0%
!! GGGCGGGCTGTCAGGGCAAC+TGG + chr8.2:29939887-29939906 MS.gene28884:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 29938615 29943620 29938615 ID=MS.gene28884
chr8.2 mRNA 29938615 29943620 29938615 ID=MS.gene28884.t1;Parent=MS.gene28884
chr8.2 exon 29938615 29938912 29938615 ID=MS.gene28884.t1.exon1;Parent=MS.gene28884.t1
chr8.2 CDS 29938615 29938912 29938615 ID=cds.MS.gene28884.t1;Parent=MS.gene28884.t1
chr8.2 exon 29939684 29940051 29939684 ID=MS.gene28884.t1.exon2;Parent=MS.gene28884.t1
chr8.2 CDS 29939684 29940051 29939684 ID=cds.MS.gene28884.t1;Parent=MS.gene28884.t1
chr8.2 exon 29942707 29942943 29942707 ID=MS.gene28884.t1.exon3;Parent=MS.gene28884.t1
chr8.2 CDS 29942707 29942943 29942707 ID=cds.MS.gene28884.t1;Parent=MS.gene28884.t1
chr8.2 exon 29943360 29943620 29943360 ID=MS.gene28884.t1.exon4;Parent=MS.gene28884.t1
chr8.2 CDS 29943360 29943620 29943360 ID=cds.MS.gene28884.t1;Parent=MS.gene28884.t1
Gene Sequence

>MS.gene28884

ATGGACTTCCTAACTGCCTGTTGGCGGAGAAGATCTTCGGACAGAAAATCATCCGATGTTTGCGGAAAGAAAGAAGGTCTGCTGTGGTACAAAGATGCTGGACAGCATCTCTTTGGTGATTATTCCATGGCGGTTGTGCAGGCTAATAACCTGCTTGAAGATCAGAGTCAGATTGAGTCTGGTCCTCTTAGTTTTCTAGATACTGGTCCTTATGGTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAGACTTCTCGCTTCATTTGCGATCATCTTTTTCAGCATTTAAAACGTAGTAATTTGTTCTAAATTTTATTTTTTTTGGTGAATTTATGTTGTTATTGTGTGTTAATTTAATGGGTTGATGTTGATTGTTTTAAAATGTTTATGGATTTGATTAATTCACTTTAAAGGGGTTAAGTAACTATAGATGACAAAAAATCAACTGTTGATGTGATGTTGCTTACTTGTAGGGATTTGACTCCTCTAGAGACTGAGTAGATAGCTACAAAGCACTGACACACACCTGACATGTCGACATCGGTAGTAATTTAAGAAAATGACATAATTGAATAAAATCACATGTGTCGAAGTCGTGTCGGGCACAAACATTTGTTGGACACTGGACACGTCTTTGATCAGAAGCGTTGGTGCTACAGAAGTAGAGAGAAATGAAAAAGAAAGAAAAAATCAATGGTTGATATTTCGATACACCTTTGATTAGTTATAGTAGTATATGTAATATCAATCATTGATTTATCATCAATGATAGATATTGTTTTCATCAATGATAGATATTGTTTCACTTTACACTCTGAAGTAAGTTGCTCAGTTTACAGGAGTCAGATCCTAATTGTTGTAGTTACTTGATAAATCATTGTTATGGTTTGTTGAAATATACTACCTTGACTTTCTCATAACATGTTTAAAGTGAAATACTCGCTTTAGAGGAGTTGGTTAAATTCATGTTCAATGGTTGATTCTCATTTCATGTTGCTTTGGGACATTTTTGTAGATGTTTTATATGTGTGTTTTTATTTATTTTTTATTTTTTTTATTTAAGGATTTGCGACGGAGCATAAGTCTATGTCTGTGGAGGTTATTCGAAAGGCATATCAAGCCACAGAAGAAGGTTTTCTGGGAGTGGTTACTAAGCACTGGCCTATGAATCCTCAGATCGCTGCTGTGGGATCTTGTTGTTTGGTCGGTGTGATTTGTGGTGGTTCACTGTACATTGCAAACCTCGGTGATTCCCGTGCTGTTCTTGGGCGGGCTGTCAGGGCAACTGGGGAGGTTTTGGCAATCCAGCTTTCGCCGGAGCATAACGTGGCCATAGAGTCTGTTAGACAAGAGATGCATTCCTTGCATCCGGATGACCCGAAAATTGTCGTTCTAAAGCACAACGTGTGGCGGGTGAAGGGTCTAATACAGGTATGTTCTGTAGTGATTGGCATTTTTCATTGTGGCAAGGAATTCAGAATATCATTTTCCCTTATTTTTCAGTCCTATTTTTTTTCTTGGAAATTGGTAAATTTCAACATTTTTTGCAGTATATAAACGTTTCGATTTAATATGTTATTAGACTATGTGTTGTCTTGTCTGTAGTTTTTTCAGCTTAGGGGTATGTTAAGTCACGTTCTCAGTGGTTGACTTCTTGAGAGTATTGATGAATTATGTAGATTGACATCACCTTGCAAGAAGTCATGCGTGCATGGGTTTTTTTGTCCTTTGCAGTCGTCATTCTCATGATTTATATAATTTGCTGATTTATTATATTTGTCTTTTTGTTGGAAAATACAATATTTAAAGTAATTCAACAAATCAAAGCATGGAAGTGAATGTTCTTATTAAATAGTGCACTGCACAATGCCAAAGCTAGAAAAGACTCCAAATTAGGGGTCCTATCCTGTAATTATACAAACAATCTAAACACCATATCTGCCCACTTCATTATGAGAAAGAGGTATCTTTAGAACCACTTGACTCAAACACGGGGAGAATGCCCCAATGAGGCATGCATATTGATCAGTATCTAAGAAATTGGGGAACCCTCCCTTAAAAGCTAGCTATCAAGAGGGAAGAATCAAGCCACTTAAATAATCCACTGAACATCCTATACTACCCGATGTGGGGTTTGAGCACTCCATAATACTCGCACCCCTATCATAGCACCACCCCTGAGCGCCAATGACCCGGCGGCTGACACTTATTGACGCTCAACTCTTTCTGATCAGCCCCCCGTTGGTAGCCCTTTCCGAGCCACCAACAACCAGCTCTGACACCATTTGATAGGTATCTAAGCACTCTGGGAACCCACCCTTAAAACGTAGCTATCAAAGGGGAAGAACCAAGCCATTTAAATACCCCACCGAGCATCCCATACCACTCGGTCTGGTACCCAAGCCCCGATCACATATTTGCATAAAATCACATTAGTGCTATTCCTCATAAGGATTGTTGTCCACTCAAAAGCCTTGATTGTTGAGGGGGCTTTGAACTTTCCATGTGTATGATCTAATACATGAGAGAGTATTTAAAATGATGCAATGCAGCATATAGTTTCAAGTCTACTGAACTGATCTTTCCAACTATTGTTACTCTATTTTCCTCTTAGGATTTCTACATCAAATAATGGGTTCCCTCTCTCTGTCTGGGCCTGTTTTTGTGTTTGAGTTTCTGCTTTTCCAAAGAACATATTTTTAAAAAACTATGACAATTAGATAATGTTTGATTGTTTTCTTTTCCTTCCAAATTAAGCCCCCAGAAAAATTGGTTGTGTTTTTGTGTTGTAAACAGTAGCTTCTAAAAATTAGCTGATTAGAAAAGCGTTTGTTAGAATGAAAAACTCATGCTTCACGTCTGCATTTCATCTATAGAATATCTATAGATTATGCGCAATTGATTCAGAGATAATGTATGTTATTATTAGTTTACAATTACTATGTTCAGGTACCAATCATGTTTGTCATCAGTACAATTGTGTTCTAGATACACACTTCCTCAAACCGTAATTTCATCTTATAAAAGAAGATACCTGAAAGATGCCAAATATAACTCAAAATTCATCTTGTATTAAATGTGCATCTTTTATTCCTTTTGAATTCTTGATGGATATGGTGATCATAAATGTTATTGAGGTAGAGGTCTAGGAATACACATTTTTGAGGTGTTGATGGGATGCTATTCGGTCAGAAATTAATAAAGTAATGATTGAAAATTCTTTCAGTTGATAAATCTGATATTAAAGAACTTATTAATGTGAATTAACTTCATGTTTCGAGGATATTGTCAGCCTCCTATTCCTTAAGAGCGGTGGATATAATCACATTGTGGGTAGACCTTGTATAATTGCAATATAATTCAAGATACGAACCAAATGGGTTTTCGTCACAAAAAGATGTATAGGCTTGGCAACCAAATCTTTTATCGTCATAAAAAGATGTATAGGCGGGTCTGAATTTTTTGCTCGACCTGACCCCTAATTTCATATTGAAATTCACATCCTAGTATCCTATGCACCCAACCTCACTTTTCCGAAGTAAAGAATATGCTAAGTATGGATTGTGGAATGAATGAAGATAAACTATTATATTAGTGACTAAGAAGACCATAACGCTTATTCAAATAATGGACTGTTAGGGAAAACTTAGCATCCGCCCTGCCGTCAAGGAGTTGAGATCCTCTCCATTTCAAAATAAATGGACATCTCCATTACTATAGTTTTGGTGTATAAATGTCCAATTAATATCTCTAATTTGAGAAATATGTGCATTTGTATTTATTTACTTCAAAACTATAGTAATGGAGATGTCCATTTATTTTAAGAAATGGAGAGGATCCCAACCAGCCATTGAGTGGGTTTGGGAAAATTGCCAGCCCTAAGATTTAAGATGTATAGCTTTACTATCTTATCCTGTAGTTGTAGGTTGTATTAAATATTTAATTCTTGATTCAAAGATCTTCCAGCACAGCAAATGAAAGAAGTTTACATAAAGGATCGAAGTTTCTATTGAATTTGGTCTCGTATGATGTTAAATTCTTTGGACTTGCTATTTAGAATGCAACTTATGAATTTTGTGTGTGCAGATTTCTAGATCCATTGGTGACGTATACCTTAAAAAGGCAGAATTTAACAGGGAACCACTGTATGCTAAGTTTCGCCTACGGGAAACTTTCAAAACGCCAATTTTGAGCTCTGACCCATCAATATCTGTTCATGAACTACAAGAGCATGATCAATTTCTGATATTTGCCTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAACCACCCTCACAGTGTAAGATAAATATACTATATGGTTGTTTCTTTTTTGTTTTATGGTTTTTATTGCTTAATTACTATATTATATCCGTTCATGACTGGCTCTTATCTATTCAATAAGTTTCAAATGCGTTAATACTTGAATTTATTGCCTTTTATACATTTAACATGCTTTTACACATGCTAACAAGTCATTACTCTTTTTGTTTAGTTCATGCTATTCTCCCTCATATAAATGATATTGATGGAAGATAAAATGGATAGGCTGTTGATTTCTTTTGTAGCAGGCAAAAGCTGTGACAAATCTTATTTAGGATGCACATTTTGATGGAAAATTGACAATTTTAACTGAAATAAAACACCTTGATAGCAGCTTTAAAGAGTAAAGGATATATGTATTATTGTAGGCATTACATGTTTTCTATTTTGCAGGGGAGTGCTCGGAAGCTGATCAAAGTGGCTTTGCTGGAAGCAGCCAAGAAAAGAGAGATGAGGTACTCTGATCTGAAGAAAATTGACCGAGGTGTCCGTCGTCATTTCCACGACGACATCACCGTTGTAGTTATATTTCTTGACTCGAATCTTGTCAGCAGAGCAAGCACAGTAACAGGCCCCCCTGTGTCACTGAGGGGAGCTGGTGTTCCCCTACCGTCTAGATCTCTGGCACCAATGGAACTTCCAGGTCCTGGCTGA
Protein sequence

>MS.gene28884.t1

MDFLTACWRRRSSDRKSSDVCGKKEGLLWYKDAGQHLFGDYSMAVVQANNLLEDQSQIESGPLSFLDTGPYGTFVGVYDGHGGPETSRFICDHLFQHLKRFATEHKSMSVEVIRKAYQATEEGFLGVVTKHWPMNPQIAAVGSCCLVGVICGGSLYIANLGDSRAVLGRAVRATGEVLAIQLSPEHNVAIESVRQEMHSLHPDDPKIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLRETFKTPILSSDPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARKLIKVALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVIFLDSNLVSRASTVTGPPVSLRGAGVPLPSRSLAPMELPGPG