AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37329

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37329.t1 MTR_7g112580 98.899 454 5 0 1 454 91 544 0.0 944
MS.gene37329.t1 MTR_4g087980 50.331 453 199 6 10 452 80 516 9.10e-160 462
MS.gene37329.t1 MTR_2g044880 49.227 453 207 6 10 452 86 525 4.10e-159 461
MS.gene37329.t1 MTR_3g091380 48.723 470 216 6 5 453 133 598 1.56e-156 456
MS.gene37329.t1 MTR_1g008140 48.421 475 207 9 10 453 141 608 3.53e-150 441
MS.gene37329.t1 MTR_7g108905 45.778 450 233 3 13 453 110 557 9.29e-148 432
MS.gene37329.t1 MTR_4g025730 49.666 449 188 10 12 452 91 509 5.49e-144 421
MS.gene37329.t1 MTR_4g087970 46.222 450 216 7 16 453 83 518 8.82e-143 419
MS.gene37329.t1 MTR_4g025690 49.339 454 189 10 10 452 90 513 1.38e-139 410
MS.gene37329.t1 MTR_8g042900 46.035 454 227 6 7 452 138 581 1.56e-137 407
MS.gene37329.t1 MTR_1g083520 45.154 454 219 7 15 452 89 528 1.91e-135 400
MS.gene37329.t1 MTR_8g104655 46.072 471 219 9 4 452 84 541 2.26e-135 400
MS.gene37329.t1 MTR_3g010780 44.130 460 221 5 10 452 134 574 2.93e-135 401
MS.gene37329.t1 MTR_8g023310 44.111 467 234 5 8 452 128 589 2.82e-134 399
MS.gene37329.t1 MTR_7g050980 45.275 455 218 8 12 452 118 555 5.24e-134 397
MS.gene37329.t1 MTR_7g050870 44.956 456 218 10 12 452 117 554 1.53e-131 391
MS.gene37329.t1 MTR_1g054880 44.516 465 228 8 16 452 96 558 2.20e-130 388
MS.gene37329.t1 MTR_2g044810 42.795 458 235 8 4 452 95 534 2.75e-129 385
MS.gene37329.t1 MTR_1g088020 44.111 467 229 8 16 452 91 555 2.37e-128 383
MS.gene37329.t1 MTR_8g104645 53.846 338 143 3 128 452 35 372 3.24e-128 376
MS.gene37329.t1 MTR_4g025670 44.924 463 211 10 6 452 55 489 6.13e-128 380
MS.gene37329.t1 MTR_3g010770 42.213 488 241 7 5 454 93 577 1.39e-126 379
MS.gene37329.t1 MTR_4g124520 43.590 429 217 6 37 452 105 521 2.01e-126 377
MS.gene37329.t1 MTR_7g050950 45.175 456 216 13 12 452 117 553 7.63e-126 376
MS.gene37329.t1 MTR_8g042910 43.215 479 237 8 8 452 135 612 7.65e-126 379
MS.gene37329.t1 MTR_7g108875 44.421 466 228 9 16 452 101 564 5.96e-125 374
MS.gene37329.t1 MTR_7g053360 44.270 445 218 8 19 452 102 527 1.35e-122 367
MS.gene37329.t1 MTR_1g088225 43.469 467 230 9 16 452 91 553 1.93e-122 368
MS.gene37329.t1 MTR_3g008640 44.494 445 217 8 19 452 102 527 3.77e-122 366
MS.gene37329.t1 MTR_3g008720 44.270 445 218 8 19 452 102 527 3.42e-121 363
MS.gene37329.t1 MTR_4g035980 43.860 456 230 9 9 452 98 539 6.23e-121 363
MS.gene37329.t1 MTR_3g033690 47.073 410 189 8 55 452 133 526 6.93e-121 363
MS.gene37329.t1 MTR_3g008700 44.045 445 219 8 19 452 102 527 1.68e-120 362
MS.gene37329.t1 MTR_8g023150 43.966 464 242 6 1 452 125 582 5.84e-119 360
MS.gene37329.t1 MTR_7g108890 44.037 436 198 9 54 452 136 562 9.95e-119 358
MS.gene37329.t1 MTR_1g086190 40.938 469 242 11 10 453 106 564 4.73e-116 352
MS.gene37329.t1 MTR_1g083510 36.674 469 266 7 12 451 116 582 4.83e-115 350
MS.gene37329.t1 MTR_7g108900 41.614 471 238 11 16 453 95 561 7.37e-115 348
MS.gene37329.t1 MTR_7g112590 38.936 470 255 9 10 451 117 582 1.58e-112 343
MS.gene37329.t1 MTR_1g086210 38.889 468 253 8 14 452 106 569 1.84e-112 343
MS.gene37329.t1 MTR_1g083490 39.427 454 251 9 12 448 125 571 1.53e-111 341
MS.gene37329.t1 MTR_0458s0030 56.786 280 107 3 182 452 40 314 1.26e-110 329
MS.gene37329.t1 MTR_1g088040 56.786 280 107 3 182 452 40 314 1.26e-110 329
MS.gene37329.t1 MTR_4g005170 39.648 454 250 9 12 448 125 571 2.39e-110 339
MS.gene37329.t1 MTR_1g083470 38.274 452 259 8 12 448 120 566 2.65e-110 337
MS.gene37329.t1 MTR_1g083500 38.274 452 259 8 12 448 120 566 2.65e-110 337
MS.gene37329.t1 MTR_4g005180 38.829 461 258 9 5 448 100 553 1.33e-109 335
MS.gene37329.t1 MTR_4g124550 39.316 468 260 9 3 452 132 593 2.95e-109 335
MS.gene37329.t1 MTR_2g044660 38.614 505 242 10 10 454 138 634 1.12e-106 330
MS.gene37329.t1 MTR_8g104580 40.552 471 212 11 4 452 76 500 3.90e-106 324
MS.gene37329.t1 MTR_2g436040 36.000 450 259 6 16 449 107 543 5.00e-102 317
MS.gene37329.t1 MTR_4g120280 35.974 467 270 9 7 451 112 571 1.01e-100 313
MS.gene37329.t1 MTR_7g110560 36.717 463 252 11 14 452 104 549 2.61e-100 311
MS.gene37329.t1 MTR_4g120290 34.409 465 280 7 7 451 112 571 9.02e-98 305
MS.gene37329.t1 MTR_7g110490 37.953 469 255 9 14 453 106 567 3.09e-96 301
MS.gene37329.t1 MTR_7g110510 37.953 469 255 9 14 453 106 567 3.09e-96 301
MS.gene37329.t1 MTR_2g436050 34.924 461 278 8 7 451 109 563 4.16e-96 300
MS.gene37329.t1 MTR_7g110440 36.170 470 266 7 11 452 103 566 2.56e-94 296
MS.gene37329.t1 MTR_2g044810 52.590 251 109 2 211 452 216 465 1.53e-93 290
MS.gene37329.t1 MTR_8g093460 37.500 464 243 11 5 441 97 540 1.39e-92 291
MS.gene37329.t1 MTR_3g095920 35.699 479 251 11 8 451 107 563 7.05e-91 286
MS.gene37329.t1 MTR_0618s0020 54.185 227 95 1 235 452 2 228 2.18e-86 264
MS.gene37329.t1 MTR_8g088610 40.774 336 178 7 128 449 45 373 2.14e-81 256
MS.gene37329.t1 MTR_7g110420 35.865 474 260 11 11 447 103 569 7.61e-81 261
MS.gene37329.t1 MTR_7g110430 34.416 462 251 7 11 452 103 532 2.95e-80 258
MS.gene37329.t1 MTR_2g105560 39.420 345 180 6 124 452 8 339 2.90e-76 242
MS.gene37329.t1 MTR_5g083620 36.873 339 194 6 129 452 23 356 6.79e-75 239
MS.gene37329.t1 MTR_7g107180 41.158 311 162 5 152 452 8 307 8.76e-73 232
MS.gene37329.t1 MTR_0458s0010 34.279 458 250 10 16 452 91 518 1.58e-72 238
MS.gene37329.t1 MTR_7g111560 33.407 452 263 10 19 452 125 556 1.17e-70 234
MS.gene37329.t1 MTR_6g024165 36.778 329 178 8 126 443 27 336 2.32e-59 198
MS.gene37329.t1 MTR_6g088810 33.333 381 227 11 82 441 3 377 6.55e-58 195
MS.gene37329.t1 MTR_1g086540 36.213 301 172 6 153 441 52 344 7.72e-58 194
MS.gene37329.t1 MTR_6g012800 36.700 297 167 6 153 436 8 296 3.85e-56 189
MS.gene37329.t1 MTR_2g039530 40.594 303 157 10 127 419 30 319 4.81e-56 189
MS.gene37329.t1 MTR_8g102380 35.473 296 172 5 159 441 88 377 2.54e-53 183
MS.gene37329.t1 MTR_7g011530 34.545 275 162 3 153 414 8 277 1.90e-49 171
MS.gene37329.t1 MTR_7g102600 33.446 296 187 4 153 441 101 393 3.51e-49 173
MS.gene37329.t1 MTR_7g092780 32.542 295 186 5 157 441 96 387 1.34e-47 168
MS.gene37329.t1 MTR_6g042660 34.601 263 158 5 157 414 43 296 1.79e-47 166
MS.gene37329.t1 MTR_5g093970 33.677 291 187 4 152 441 44 329 5.84e-47 165
MS.gene37329.t1 MTR_6g042690 34.432 273 160 5 152 414 40 303 6.60e-46 162
MS.gene37329.t1 MTR_5g012600 32.915 319 192 7 142 444 50 362 7.11e-46 163
MS.gene37329.t1 MTR_8g102380 36.667 240 136 3 159 385 88 324 1.09e-44 159
MS.gene37329.t1 MTR_5g095490 32.323 297 183 5 157 441 67 357 2.39e-44 159
MS.gene37329.t1 MTR_1g033050 33.684 285 173 6 142 414 4 284 9.78e-44 156
MS.gene37329.t1 MTR_4g124740 33.555 301 171 9 153 441 56 339 5.88e-42 152
MS.gene37329.t1 MTR_2g033970 29.333 300 192 7 153 442 58 347 1.90e-41 151
MS.gene37329.t1 MTR_5g083590 29.206 315 163 6 148 452 4 268 7.55e-41 147
MS.gene37329.t1 MTR_5g088300 31.633 294 182 5 152 441 38 316 3.09e-37 139
MS.gene37329.t1 MTR_2g436600 27.703 296 193 8 153 442 57 337 9.82e-37 138
MS.gene37329.t1 MTR_4g074290 29.618 314 203 7 136 441 58 361 1.52e-35 135
MS.gene37329.t1 MTR_2g073390 28.889 315 204 8 136 441 58 361 1.09e-34 133
MS.gene37329.t1 MTR_8g036225 30.292 274 169 7 153 414 35 298 5.92e-33 127
MS.gene37329.t1 MTR_5g088290 30.556 288 190 3 152 436 49 329 6.53e-33 127
MS.gene37329.t1 MTR_4g051810 29.866 298 197 5 146 441 30 317 1.91e-32 125
MS.gene37329.t1 MTR_5g088280 29.965 287 190 4 152 435 40 318 1.73e-31 123
MS.gene37329.t1 MTR_0009s0350 28.014 282 192 5 136 411 58 334 2.36e-31 124
MS.gene37329.t1 MTR_0009s0340 28.014 282 192 5 136 411 58 334 2.36e-31 124
MS.gene37329.t1 MTR_6g025590 30.653 199 119 4 120 310 29 216 4.54e-27 108
MS.gene37329.t1 MTR_2g436070 29.524 210 139 5 16 222 118 321 7.12e-25 105
MS.gene37329.t1 MTR_0408s0030 43.182 88 50 0 327 414 36 123 4.54e-21 89.7
MS.gene37329.t1 MTR_6g024200 33.537 164 96 4 279 441 125 276 1.79e-18 85.9
MS.gene37329.t1 MTR_4g035870 39.216 102 53 3 9 105 96 193 2.25e-15 75.1
MS.gene37329.t1 MTR_4g035880 39.604 101 52 3 9 104 96 192 2.48e-15 74.7
MS.gene37329.t1 MTR_7g102580 45.349 86 37 2 225 305 73 153 1.45e-14 71.2
MS.gene37329.t1 MTR_7g108790 36.559 93 58 1 12 104 96 187 4.57e-14 71.2
MS.gene37329.t1 MTR_4g130790 27.854 219 137 8 174 383 48 254 5.28e-14 72.4
MS.gene37329.t1 MTR_4g035905 38.182 110 55 4 4 104 87 192 1.04e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37329.t1 AT3G05620 69.197 461 123 4 4 454 92 543 0.0 669
MS.gene37329.t1 AT4G33220 51.477 474 205 5 1 452 53 523 4.99e-172 493
MS.gene37329.t1 AT3G43270 51.435 453 207 5 11 452 75 525 7.25e-167 480
MS.gene37329.t1 AT4G33220 53.086 405 166 4 69 452 1 402 3.53e-153 441
MS.gene37329.t1 AT5G53370 48.366 459 212 7 12 453 136 586 4.34e-151 442
MS.gene37329.t1 AT5G53370 48.366 459 212 7 12 453 172 622 1.48e-150 442
MS.gene37329.t1 AT3G49220 47.930 459 212 6 12 453 149 597 1.61e-146 431
MS.gene37329.t1 AT3G49220 47.930 459 212 6 12 453 194 642 8.16e-146 431
MS.gene37329.t1 AT1G23200 47.346 471 211 8 8 452 95 554 7.65e-137 405
MS.gene37329.t1 AT2G45220 48.124 453 194 11 10 452 90 511 5.47e-136 401
MS.gene37329.t1 AT1G11580 44.420 448 226 5 12 448 118 553 2.19e-133 396
MS.gene37329.t1 AT1G11580 44.420 448 226 5 12 448 139 574 6.27e-133 395
MS.gene37329.t1 AT4G02300 43.392 454 232 6 13 452 90 532 1.00e-132 393
MS.gene37329.t1 AT3G05610 42.704 466 228 9 10 452 116 565 3.95e-130 391
MS.gene37329.t1 AT1G53830 44.731 465 231 6 12 452 125 587 4.71e-129 386
MS.gene37329.t1 AT4G02320 41.631 466 235 5 8 452 69 518 8.62e-129 383
MS.gene37329.t1 AT5G27870 41.266 458 244 5 10 452 115 562 8.89e-129 390
MS.gene37329.t1 AT2G43050 45.843 445 210 7 17 454 98 518 2.75e-128 382
MS.gene37329.t1 AT3G14310 42.227 476 235 5 12 452 122 592 3.01e-127 381
MS.gene37329.t1 AT2G26440 44.248 452 229 7 16 452 104 547 1.19e-126 378
MS.gene37329.t1 AT3G10710 44.912 452 224 9 10 452 126 561 1.62e-126 379
MS.gene37329.t1 AT3G60730 43.226 465 227 6 14 452 66 519 4.51e-126 376
MS.gene37329.t1 AT4G00190 44.843 446 202 8 16 452 64 474 1.26e-124 370
MS.gene37329.t1 AT5G51490 44.323 458 225 10 10 452 94 536 4.21e-124 371
MS.gene37329.t1 AT4G02330 42.259 478 233 9 16 452 96 571 2.14e-123 371
MS.gene37329.t1 AT3G59010 43.607 438 234 6 17 452 102 528 2.73e-120 361
MS.gene37329.t1 AT3G47400 43.404 470 230 9 3 452 141 594 1.04e-119 362
MS.gene37329.t1 AT5G04960 42.257 452 238 6 9 450 124 562 2.19e-118 358
MS.gene37329.t1 AT5G04970 43.396 477 226 12 13 452 151 620 2.94e-118 359
MS.gene37329.t1 AT1G02810 41.273 487 235 8 16 452 92 577 8.87e-118 357
MS.gene37329.t1 AT5G51500 41.970 467 241 10 1 452 89 540 1.52e-117 355
MS.gene37329.t1 AT3G10720 41.632 478 243 11 8 452 141 615 3.98e-117 356
MS.gene37329.t1 AT2G47550 44.304 474 213 14 16 452 99 558 1.04e-115 351
MS.gene37329.t1 AT2G26450 41.850 454 243 9 10 452 168 611 1.47e-114 349
MS.gene37329.t1 AT4G33230 41.416 466 249 9 4 452 148 606 2.05e-114 349
MS.gene37329.t1 AT1G53840 40.605 463 250 8 3 446 125 581 5.46e-113 345
MS.gene37329.t1 AT5G49180 40.535 449 248 7 16 448 121 566 1.24e-112 343
MS.gene37329.t1 AT5G20860 40.133 451 232 10 18 452 110 538 9.89e-106 324
MS.gene37329.t1 AT4G03930 41.748 412 219 6 50 452 125 524 5.35e-105 322
MS.gene37329.t1 AT3G06830 37.634 465 257 8 10 450 111 566 2.93e-104 322
MS.gene37329.t1 AT3G10720 55.769 260 105 3 202 452 1 259 1.99e-103 309
MS.gene37329.t1 AT1G11590 42.271 414 214 7 50 452 125 524 1.00e-102 316
MS.gene37329.t1 AT3G14300 39.503 443 246 8 16 443 525 960 2.48e-101 324
MS.gene37329.t1 AT3G27980 40.494 405 217 6 57 452 108 497 2.06e-98 304
MS.gene37329.t1 AT4G15980 44.380 347 180 4 116 450 355 700 6.44e-93 296
MS.gene37329.t1 AT4G15980 44.380 347 180 4 116 450 365 710 1.08e-92 295
MS.gene37329.t1 AT5G09760 44.688 320 147 6 144 440 234 546 2.58e-87 277
MS.gene37329.t1 AT5G09760 44.688 320 147 6 144 440 260 572 6.99e-87 276
MS.gene37329.t1 AT5G64640 35.246 488 230 15 8 445 151 602 1.63e-83 268
MS.gene37329.t1 AT5G20860 36.009 436 213 9 18 437 110 495 4.84e-81 259
MS.gene37329.t1 AT3G62170 31.098 492 284 11 8 452 105 588 3.88e-75 246
MS.gene37329.t1 AT2G47030 31.936 501 279 11 5 452 97 588 8.13e-75 245
MS.gene37329.t1 AT1G11370 44.487 263 132 2 129 382 29 286 2.34e-73 233
MS.gene37329.t1 AT2G47040 31.041 509 280 12 5 452 97 595 7.56e-73 240
MS.gene37329.t1 AT2G36710 34.884 301 186 4 153 446 93 390 6.50e-56 191
MS.gene37329.t1 AT5G19730 33.333 354 203 8 112 441 37 381 1.90e-54 186
MS.gene37329.t1 AT2G36700 32.153 339 207 6 108 441 13 333 3.11e-53 182
MS.gene37329.t1 AT1G05310 33.333 300 187 5 152 441 92 388 2.40e-50 176
MS.gene37329.t1 AT3G29090 34.615 312 179 7 153 447 9 312 3.93e-50 173
MS.gene37329.t1 AT3G17060 31.544 298 190 5 152 442 47 337 3.24e-49 171
MS.gene37329.t1 AT1G44980 44.149 188 103 1 129 314 54 241 1.03e-46 162
MS.gene37329.t1 AT5G47500 29.428 367 226 8 93 443 11 360 2.34e-46 164
MS.gene37329.t1 AT2G21610 31.615 291 186 5 153 441 53 332 1.14e-45 162
MS.gene37329.t1 AT2G21610 31.615 291 186 5 153 441 58 337 1.63e-45 162
MS.gene37329.t1 AT5G07430 29.737 380 220 10 82 441 3 355 1.51e-43 157
MS.gene37329.t1 AT5G18990 32.595 316 189 7 138 441 20 323 1.33e-41 150
MS.gene37329.t1 AT3G24130 30.938 320 194 9 138 441 20 328 4.80e-41 149
MS.gene37329.t1 AT5G55590 31.457 302 189 6 152 441 83 378 3.45e-39 145
MS.gene37329.t1 AT5G55590 32.927 246 150 5 152 385 83 325 7.47e-39 143
MS.gene37329.t1 AT2G19150 30.547 311 200 6 147 448 36 339 1.70e-37 140
MS.gene37329.t1 AT5G61680 29.912 341 202 9 114 441 42 358 3.37e-37 140
MS.gene37329.t1 AT5G26810 30.547 311 190 7 152 443 35 338 1.30e-36 137
MS.gene37329.t1 AT3G49220 34.649 228 131 5 12 231 194 411 2.02e-36 139
MS.gene37329.t1 AT5G07420 31.081 296 190 7 152 441 68 355 7.84e-34 130
MS.gene37329.t1 AT1G69940 27.891 294 189 7 159 441 74 355 3.62e-33 129
MS.gene37329.t1 AT2G19150 31.855 248 156 5 147 385 36 279 3.65e-33 127
MS.gene37329.t1 AT5G07410 27.551 294 190 7 159 441 74 355 5.69e-33 128
MS.gene37329.t1 AT2G47280 28.808 302 195 7 153 443 37 329 4.17e-30 120
MS.gene37329.t1 AT3G62820 36.792 106 61 3 2 104 87 189 7.48e-12 64.7

Find 117 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTCACAACCTACATATT+TGG 0.095781 7.2:+27382050 MS.gene37329:CDS
CAGACCAATCTGCATTCTTT+AGG 0.260515 7.2:+27381791 MS.gene37329:CDS
TGTTAATGTGTAGCTGTATC+TGG 0.260734 7.2:+27381685 MS.gene37329:intron
GCCTCACAACCTACATATTT+GGG 0.269773 7.2:+27382051 MS.gene37329:CDS
AGCTTAATCGCTTACCCTTT+AGG 0.279269 7.2:+27381160 MS.gene37329:CDS
AATCCAAGATAGTTATGTTT+TGG 0.298560 7.2:+27382029 MS.gene37329:CDS
GTGAACTTAACACCTGTTCT+AGG 0.327842 7.2:-27382327 None:intergenic
TACGGTGAATACAGGAATTA+TGG 0.331114 7.2:+27382189 MS.gene37329:CDS
CTACATATTTGGGGAGGCCT+TGG 0.347308 7.2:+27382061 MS.gene37329:CDS
TTCTTTAGGTGTAGCATAGA+AGG 0.349482 7.2:+27381805 MS.gene37329:CDS
GGTTCCTTAACGGCGGTTCA+TGG 0.359467 7.2:+27382301 MS.gene37329:CDS
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 7.2:+27380937 MS.gene37329:CDS
GCCACGGCTTGATGGTTTAC+CGG 0.370851 7.2:-27381754 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 7.2:-27381237 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 7.2:-27380899 None:intergenic
TACCGTGAATGCGAAATCTA+TGG 0.377605 7.2:+27381868 MS.gene37329:CDS
CACGCAATGCCACGGCTTGA+TGG 0.381995 7.2:-27381762 None:intergenic
AACTAGTACTGATGAAAGTT+TGG 0.382732 7.2:+27381209 MS.gene37329:CDS
TTACCGGTCCAGCAGTGTTC+CGG 0.387620 7.2:-27381738 None:intergenic
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 7.2:+27380938 MS.gene37329:CDS
TCTACCAGCGAGCGATGAAC+CGG 0.402703 7.2:-27382214 None:intergenic
ACGGTTCAGCGGTTCCTTAA+CGG 0.416002 7.2:+27382291 MS.gene37329:CDS
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 7.2:+27381300 MS.gene37329:CDS
AGGCCAAAACATAACTATCT+TGG 0.418609 7.2:-27382032 None:intergenic
CCGCACTTAGCCATGCTTCG+AGG 0.428133 7.2:-27381011 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 7.2:+27381361 MS.gene37329:CDS
CCGCTGAACCGTAAAATAAC+CGG 0.446817 7.2:-27382280 None:intergenic
TAACACATACATGAGTAGTA+TGG 0.446857 7.2:+27382110 MS.gene37329:CDS
ATGACATTCCGGAACACTGC+TGG 0.450390 7.2:+27381730 MS.gene37329:CDS
ACAGAACATTACTGATAAGC+TGG 0.453691 7.2:-27381125 None:intergenic
ATTAAAGACGCTTCTGCCGC+CGG 0.455714 7.2:+27382261 MS.gene37329:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 7.2:-27381335 None:intergenic
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 7.2:-27381186 None:intergenic
CATCTTGAGAGTTACATTAG+TGG 0.464671 7.2:+27381084 MS.gene37329:CDS
GCAACCATGAACCGCCGTTA+AGG 0.465728 7.2:-27382305 None:intergenic
ACTTTGCATTAGACACTTTG+TGG 0.470978 7.2:+27382166 MS.gene37329:CDS
TTCCATAGATTTCGCATTCA+CGG 0.471515 7.2:-27381870 None:intergenic
GGTTCATGGTTGCCTAGAAC+AGG 0.472411 7.2:+27382315 MS.gene37329:CDS
TTGCAAGGGACATGACATTC+CGG 0.473496 7.2:+27381719 MS.gene37329:CDS
AGTTCCACTTCCATTACAAA+AGG 0.474475 7.2:+27381954 MS.gene37329:CDS
CTTTGTGGTACGGTGAATAC+AGG 0.485605 7.2:+27382181 MS.gene37329:CDS
GTGAAGCCTGTGCTTTGATG+TGG 0.491231 7.2:-27382006 None:intergenic
ATTCCGGAACACTGCTGGAC+CGG 0.491888 7.2:+27381735 MS.gene37329:CDS
AATCAAGACACATGTATTGA+AGG 0.492230 7.2:+27381042 MS.gene37329:CDS
ACAGGTGTTAAGTTCACAGC+AGG 0.494156 7.2:+27382333 MS.gene37329:CDS
ACATGTATTGAAGGGTTTGA+AGG 0.494549 7.2:+27381051 MS.gene37329:CDS
CGCTCGCTGGTAGAGTCAAA+TGG 0.495741 7.2:+27382223 MS.gene37329:CDS
AGAACTCTACTTACCAAAAG+TGG 0.497125 7.2:-27381538 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 7.2:+27381386 MS.gene37329:CDS
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 7.2:+27381223 MS.gene37329:CDS
AACCTCGAGGGTGGCTTGAG+TGG 0.510238 7.2:+27382136 MS.gene37329:CDS
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 7.2:-27381175 None:intergenic
GTTCTAGAATATTCCTTCCA+AGG 0.522274 7.2:-27382078 None:intergenic
ATGATCGTTGGTGATGGTAT+TGG 0.525137 7.2:+27381456 MS.gene37329:CDS
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 7.2:-27381174 None:intergenic
CTGGGAAGGGTTTCATTGCA+AGG 0.529923 7.2:+27381704 MS.gene37329:CDS
GCATTAGACACTTTGTGGTA+CGG 0.536809 7.2:+27382171 MS.gene37329:CDS
CGAGGGTGGCTTGAGTGGCT+CGG 0.541369 7.2:+27382141 MS.gene37329:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 7.2:-27380921 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 7.2:+27380929 MS.gene37329:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 7.2:+27381301 MS.gene37329:CDS
ATCAAGACACATGTATTGAA+GGG 0.544777 7.2:+27381043 MS.gene37329:CDS
CAAGGCCTCCCCAAATATGT+AGG 0.548118 7.2:-27382060 None:intergenic
ATGTGTAGCTGTATCTGGGA+AGG 0.551122 7.2:+27381690 MS.gene37329:intron
TGGGAAGGGTTTCATTGCAA+GGG 0.552908 7.2:+27381705 MS.gene37329:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 7.2:-27381484 None:intergenic
GCTGGTAGAGTCAAATGGCC+TGG 0.558166 7.2:+27382228 MS.gene37329:CDS
ATATTTGGGGAGGCCTTGGA+AGG 0.559715 7.2:+27382065 MS.gene37329:CDS
TGTGTAGCTGTATCTGGGAA+GGG 0.561947 7.2:+27381691 MS.gene37329:intron
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 7.2:+27381296 MS.gene37329:CDS
AAAAGTCCACATCAAAGCAC+AGG 0.565467 7.2:+27382000 MS.gene37329:CDS
ATCAGTACTAGTTTCATGCA+AGG 0.565775 7.2:-27381199 None:intergenic
AAAAGTGGCAGTTCGAAAAG+TGG 0.570595 7.2:-27381523 None:intergenic
TACACCTAAAGAATGCAGAT+TGG 0.571861 7.2:-27381795 None:intergenic
ATCGCAATTTCATGCAAGGA+TGG 0.575589 7.2:+27381499 MS.gene37329:CDS
AAGGTTACAATCACAGCTCA+AGG 0.578151 7.2:+27381973 MS.gene37329:CDS
AACATCATGATCGTTGGTGA+TGG 0.582464 7.2:+27381450 MS.gene37329:CDS
TGTGAAGAAGGGACTATACA+AGG 0.586315 7.2:+27381398 MS.gene37329:CDS
GTTAATGTGTAGCTGTATCT+GGG 0.587683 7.2:+27381686 MS.gene37329:intron
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 7.2:+27381306 MS.gene37329:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 7.2:+27381495 MS.gene37329:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 7.2:+27381387 MS.gene37329:CDS
GGACCCGGTTCATCGCTCGC+TGG 0.591181 7.2:+27382210 MS.gene37329:CDS
ATCACCAACGATCATGATGT+TGG 0.592216 7.2:-27381448 None:intergenic
AGTGTGCGTAAAGTGTGTCT+TGG 0.597316 7.2:-27381831 None:intergenic
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 7.2:+27381001 MS.gene37329:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 7.2:+27381444 MS.gene37329:CDS
CAGAACATTACTGATAAGCT+GGG 0.605848 7.2:-27381124 None:intergenic
TTACAATCACAGCTCAAGGT+AGG 0.609803 7.2:+27381977 MS.gene37329:CDS
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 7.2:-27380885 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 7.2:+27381169 MS.gene37329:CDS
CATGGTCGTTAGGGGAGATG+AGG 0.619966 7.2:+27380947 MS.gene37329:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 7.2:+27380894 MS.gene37329:CDS
CCCCAAATATGTAGGTTGTG+AGG 0.623360 7.2:-27382052 None:intergenic
GTAGTATGGTTCAACCTCGA+GGG 0.629470 7.2:+27382124 MS.gene37329:CDS
AGTAGTATGGTTCAACCTCG+AGG 0.630686 7.2:+27382123 MS.gene37329:CDS
TGAATCGACACGCAATGCCA+CGG 0.630967 7.2:-27381770 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 7.2:+27380985 MS.gene37329:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 7.2:+27380961 MS.gene37329:CDS
CTACCAGCGAGCGATGAACC+GGG 0.640025 7.2:-27382213 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 7.2:-27380980 None:intergenic
CCTCACAACCTACATATTTG+GGG 0.650108 7.2:+27382052 MS.gene37329:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 7.2:+27380939 MS.gene37329:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 7.2:-27381366 None:intergenic
GTATGGTTCAACCTCGAGGG+TGG 0.654064 7.2:+27382127 MS.gene37329:CDS
TCTTTAATGACATGATAACC+AGG 0.655480 7.2:-27382246 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 7.2:+27381011 MS.gene37329:CDS
ACCGGTAAACCATCAAGCCG+TGG 0.664465 7.2:+27381753 MS.gene37329:CDS
GAATACAGGAATTATGGACC+CGG 0.671183 7.2:+27382195 MS.gene37329:CDS
CACAACCTACATATTTGGGG+AGG 0.675764 7.2:+27382055 MS.gene37329:CDS
CTACTTAAATCTAAGCCGCA+CGG 0.678224 7.2:+27381267 MS.gene37329:CDS
AGCCACTCAAGCCACCCTCG+AGG 0.711855 7.2:-27382138 None:intergenic
GTTCAGCGGTTCCTTAACGG+CGG 0.714803 7.2:+27382294 MS.gene37329:CDS
CAGGTGTTAAGTTCACAGCA+GGG 0.718376 7.2:+27382334 MS.gene37329:CDS
CTGAACCGTAAAATAACCGG+CGG 0.728593 7.2:-27382277 None:intergenic
GTTTCCTGAATGGATGACAG+AGG 0.756653 7.2:+27381233 MS.gene37329:CDS
GCATCTGCAATCTTACCGTG+CGG 0.785544 7.2:-27381282 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATTGGTATATACTGAAT+TGG + chr7.2:27381648-27381667 MS.gene37329:intron 25.0%
!! AATCCAAGATAGTTATGTTT+TGG + chr7.2:27382029-27382048 MS.gene37329:CDS 25.0%
AATCAAGACACATGTATTGA+AGG + chr7.2:27381042-27381061 MS.gene37329:CDS 30.0%
ACATGTTATCTATGTGAAGA+AGG + chr7.2:27381386-27381405 MS.gene37329:CDS 30.0%
ATCAAGACACATGTATTGAA+GGG + chr7.2:27381043-27381062 MS.gene37329:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG - chr7.2:27381896-27381915 None:intergenic 30.0%
CATGTTATCTATGTGAAGAA+GGG + chr7.2:27381387-27381406 MS.gene37329:CDS 30.0%
TAACACATACATGAGTAGTA+TGG + chr7.2:27382110-27382129 MS.gene37329:CDS 30.0%
TCTTTAATGACATGATAACC+AGG - chr7.2:27382249-27382268 None:intergenic 30.0%
! ACACACTCTTTTCAATATGT+AGG - chr7.2:27381621-27381640 None:intergenic 30.0%
! GTGATTGTAACCTTTTGTAA+TGG - chr7.2:27381967-27381986 None:intergenic 30.0%
!! AACTAGTACTGATGAAAGTT+TGG + chr7.2:27381209-27381228 MS.gene37329:CDS 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG + chr7.2:27381895-27381914 MS.gene37329:CDS 30.0%
!! GAACCATAGACTTCATTTTT+GGG + chr7.2:27381890-27381909 MS.gene37329:CDS 30.0%
AACAGTATTTCTCTAGCGTA+AGG + chr7.2:27381566-27381585 MS.gene37329:intron 35.0%
ACAGAACATTACTGATAAGC+TGG - chr7.2:27381128-27381147 None:intergenic 35.0%
ACATGTATTGAAGGGTTTGA+AGG + chr7.2:27381051-27381070 MS.gene37329:CDS 35.0%
ACTTTGCATTAGACACTTTG+TGG + chr7.2:27382166-27382185 MS.gene37329:CDS 35.0%
AGAACTCTACTTACCAAAAG+TGG - chr7.2:27381541-27381560 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG - chr7.2:27382035-27382054 None:intergenic 35.0%
AGTTCCACTTCCATTACAAA+AGG + chr7.2:27381954-27381973 MS.gene37329:CDS 35.0%
ATTGCGATTGCTTGTAACAA+TGG - chr7.2:27381487-27381506 None:intergenic 35.0%
CAGAACATTACTGATAAGCT+GGG - chr7.2:27381127-27381146 None:intergenic 35.0%
CATCTTGAGAGTTACATTAG+TGG + chr7.2:27381084-27381103 MS.gene37329:CDS 35.0%
GAGTGTGTTAGAGAATGAAT+TGG + chr7.2:27381633-27381652 MS.gene37329:intron 35.0%
GTTAATGTGTAGCTGTATCT+GGG + chr7.2:27381686-27381705 MS.gene37329:intron 35.0%
TACACCTAAAGAATGCAGAT+TGG - chr7.2:27381798-27381817 None:intergenic 35.0%
TACGGTGAATACAGGAATTA+TGG + chr7.2:27382189-27382208 MS.gene37329:CDS 35.0%
TGTTAATGTGTAGCTGTATC+TGG + chr7.2:27381685-27381704 MS.gene37329:intron 35.0%
TTCCATAGATTTCGCATTCA+CGG - chr7.2:27381873-27381892 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG + chr7.2:27381805-27381824 MS.gene37329:CDS 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG + chr7.2:27381223-27381242 MS.gene37329:CDS 35.0%
! ATCAGTACTAGTTTCATGCA+AGG - chr7.2:27381202-27381221 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG + chr7.2:27381889-27381908 MS.gene37329:CDS 35.0%
! TAACAGCTTCGTTGATTGTA+CGG - chr7.2:27381338-27381357 None:intergenic 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG - chr7.2:27381961-27381980 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG - chr7.2:27382081-27382100 None:intergenic 35.0%
AAAAGTCCACATCAAAGCAC+AGG + chr7.2:27382000-27382019 MS.gene37329:CDS 40.0%
AAAAGTGGCAGTTCGAAAAG+TGG - chr7.2:27381526-27381545 None:intergenic 40.0%
AAGGTTACAATCACAGCTCA+AGG + chr7.2:27381973-27381992 MS.gene37329:CDS 40.0%
ACTTGCCATAGAAGATTGCA+AGG + chr7.2:27380894-27380913 MS.gene37329:CDS 40.0%
AGCAATCGCAATTTCATGCA+AGG + chr7.2:27381495-27381514 MS.gene37329:CDS 40.0%
AGCTTAATCGCTTACCCTTT+AGG + chr7.2:27381160-27381179 MS.gene37329:CDS 40.0%
ATCACCAACGATCATGATGT+TGG - chr7.2:27381451-27381470 None:intergenic 40.0%
ATCGCAATTTCATGCAAGGA+TGG + chr7.2:27381499-27381518 MS.gene37329:CDS 40.0%
ATGACCAACATCATGATCGT+TGG + chr7.2:27381444-27381463 MS.gene37329:CDS 40.0%
CAGACCAATCTGCATTCTTT+AGG + chr7.2:27381791-27381810 MS.gene37329:CDS 40.0%
CCTCACAACCTACATATTTG+GGG + chr7.2:27382052-27382071 MS.gene37329:CDS 40.0%
CTACTTAAATCTAAGCCGCA+CGG + chr7.2:27381267-27381286 MS.gene37329:CDS 40.0%
GAATACAGGAATTATGGACC+CGG + chr7.2:27382195-27382214 MS.gene37329:CDS 40.0%
GCATTAGACACTTTGTGGTA+CGG + chr7.2:27382171-27382190 MS.gene37329:CDS 40.0%
GCCTCACAACCTACATATTT+GGG + chr7.2:27382051-27382070 MS.gene37329:CDS 40.0%
GTGAACTTAACACCTGTTCT+AGG - chr7.2:27382330-27382349 None:intergenic 40.0%
TACCGTGAATGCGAAATCTA+TGG + chr7.2:27381868-27381887 MS.gene37329:CDS 40.0%
TGTCTCCTATTGCTATGACT+AGG - chr7.2:27381369-27381388 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG + chr7.2:27381398-27381417 MS.gene37329:CDS 40.0%
TTACAATCACAGCTCAAGGT+AGG + chr7.2:27381977-27381996 MS.gene37329:CDS 40.0%
! AACATCATGATCGTTGGTGA+TGG + chr7.2:27381450-27381469 MS.gene37329:CDS 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG + chr7.2:27381456-27381475 MS.gene37329:CDS 40.0%
!!! ACTTTTCGAACTGCCACTTT+TGG + chr7.2:27381525-27381544 MS.gene37329:CDS 40.0%
ACAGGTGTTAAGTTCACAGC+AGG + chr7.2:27382333-27382352 MS.gene37329:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG + chr7.2:27382123-27382142 MS.gene37329:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG - chr7.2:27381834-27381853 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG - chr7.2:27381178-27381197 None:intergenic 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG + chr7.2:27381301-27381320 MS.gene37329:CDS 45.0%
ATGTGTAGCTGTATCTGGGA+AGG + chr7.2:27381690-27381709 MS.gene37329:intron 45.0%
CACAACCTACATATTTGGGG+AGG + chr7.2:27382055-27382074 MS.gene37329:CDS 45.0%
CAGCTCCTAGTCATAGCAAT+AGG + chr7.2:27381361-27381380 MS.gene37329:CDS 45.0%
CAGGTGTTAAGTTCACAGCA+GGG + chr7.2:27382334-27382353 MS.gene37329:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG - chr7.2:27382055-27382074 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG - chr7.2:27382283-27382302 None:intergenic 45.0%
CTGAACCGTAAAATAACCGG+CGG - chr7.2:27382280-27382299 None:intergenic 45.0%
CTTTGTGGTACGGTGAATAC+AGG + chr7.2:27382181-27382200 MS.gene37329:CDS 45.0%
GAGCTCCTTGCAATCTTCTA+TGG - chr7.2:27380902-27380921 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG - chr7.2:27380924-27380943 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG + chr7.2:27382050-27382069 MS.gene37329:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG + chr7.2:27382124-27382143 MS.gene37329:CDS 45.0%
GTGTTCCTTGGAGACCTAAA+GGG - chr7.2:27381177-27381196 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG + chr7.2:27381233-27381252 MS.gene37329:CDS 45.0%
TCATGCAAGGTAGTGTTCCT+TGG - chr7.2:27381189-27381208 None:intergenic 45.0%
TGGGAAGGGTTTCATTGCAA+GGG + chr7.2:27381705-27381724 MS.gene37329:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG + chr7.2:27381691-27381710 MS.gene37329:intron 45.0%
TTGCAAGGGACATGACATTC+CGG + chr7.2:27381719-27381738 MS.gene37329:CDS 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG + chr7.2:27382280-27382299 MS.gene37329:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG + chr7.2:27382272-27382291 MS.gene37329:CDS 45.0%
ACGAAGGAAACCTCGAAGCA+TGG + chr7.2:27381001-27381020 MS.gene37329:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG + chr7.2:27382291-27382310 MS.gene37329:CDS 50.0%
AGAGCTTGCATGGTCGTTAG+GGG + chr7.2:27380939-27380958 MS.gene37329:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG + chr7.2:27382065-27382084 MS.gene37329:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG + chr7.2:27381730-27381749 MS.gene37329:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG + chr7.2:27382261-27382280 MS.gene37329:CDS 50.0%
CAAGGCCTCCCCAAATATGT+AGG - chr7.2:27382063-27382082 None:intergenic 50.0%
CAGAGCTTGCATGGTCGTTA+GGG + chr7.2:27380938-27380957 MS.gene37329:CDS 50.0%
CTACATATTTGGGGAGGCCT+TGG + chr7.2:27382061-27382080 MS.gene37329:CDS 50.0%
CTGGGAAGGGTTTCATTGCA+AGG + chr7.2:27381704-27381723 MS.gene37329:CDS 50.0%
CTTCTATGGCAAGTTGCTCG+CGG - chr7.2:27380888-27380907 None:intergenic 50.0%
GAGATGAGGAGAATTCGAGC+CGG + chr7.2:27380961-27380980 MS.gene37329:CDS 50.0%
GATGCAGTTGTTGCGTTGGA+TGG + chr7.2:27381300-27381319 MS.gene37329:CDS 50.0%
GCATCTGCAATCTTACCGTG+CGG - chr7.2:27381285-27381304 None:intergenic 50.0%
GCTTACCCTTTAGGTCTCCA+AGG + chr7.2:27381169-27381188 MS.gene37329:CDS 50.0%
GGTTCATGGTTGCCTAGAAC+AGG + chr7.2:27382315-27382334 MS.gene37329:CDS 50.0%
GTGAAGCCTGTGCTTTGATG+TGG - chr7.2:27382009-27382028 None:intergenic 50.0%
TCAGAGCTTGCATGGTCGTT+AGG + chr7.2:27380937-27380956 MS.gene37329:CDS 50.0%
TCAGCCTCTGTCATCCATTC+AGG - chr7.2:27381240-27381259 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG + chr7.2:27380929-27380948 MS.gene37329:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG - chr7.2:27381773-27381792 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG + chr7.2:27381296-27381315 MS.gene37329:CDS 50.0%
ACCGGTAAACCATCAAGCCG+TGG + chr7.2:27381753-27381772 MS.gene37329:CDS 55.0%
ATTCCGGAACACTGCTGGAC+CGG + chr7.2:27381735-27381754 MS.gene37329:CDS 55.0%
CATGGTCGTTAGGGGAGATG+AGG + chr7.2:27380947-27380966 MS.gene37329:CDS 55.0%
CCTCGAAGCATGGCTAAGTG+CGG + chr7.2:27381011-27381030 MS.gene37329:CDS 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG + chr7.2:27382223-27382242 MS.gene37329:CDS 55.0%
GACAGAACTGCGCAGTACGA+AGG + chr7.2:27380985-27381004 MS.gene37329:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG - chr7.2:27382308-27382327 None:intergenic 55.0%
GCTGGTAGAGTCAAATGGCC+TGG + chr7.2:27382228-27382247 MS.gene37329:CDS 55.0%
GGTTCCTTAACGGCGGTTCA+TGG + chr7.2:27382301-27382320 MS.gene37329:CDS 55.0%
GTATGGTTCAACCTCGAGGG+TGG + chr7.2:27382127-27382146 MS.gene37329:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG + chr7.2:27382294-27382313 MS.gene37329:CDS 55.0%
GTTGTTGCGTTGGATGGGAG+CGG + chr7.2:27381306-27381325 MS.gene37329:CDS 55.0%
TCTACCAGCGAGCGATGAAC+CGG - chr7.2:27382217-27382236 None:intergenic 55.0%
TTACCGGTCCAGCAGTGTTC+CGG - chr7.2:27381741-27381760 None:intergenic 55.0%
! GCCACGGCTTGATGGTTTAC+CGG - chr7.2:27381757-27381776 None:intergenic 55.0%
AACCTCGAGGGTGGCTTGAG+TGG + chr7.2:27382136-27382155 MS.gene37329:CDS 60.0%
CACGCAATGCCACGGCTTGA+TGG - chr7.2:27381765-27381784 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG - chr7.2:27381014-27381033 None:intergenic 60.0%
CTACCAGCGAGCGATGAACC+GGG - chr7.2:27382216-27382235 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG - chr7.2:27380983-27381002 None:intergenic 60.0%
AGCCACTCAAGCCACCCTCG+AGG - chr7.2:27382141-27382160 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG + chr7.2:27382141-27382160 MS.gene37329:CDS 65.0%
GGACCCGGTTCATCGCTCGC+TGG + chr7.2:27382210-27382229 MS.gene37329:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 27380853 27382368 27380853 ID=MS.gene37329
chr7.2 mRNA 27380853 27382368 27380853 ID=MS.gene37329.t1;Parent=MS.gene37329
chr7.2 exon 27380853 27381546 27380853 ID=MS.gene37329.t1.exon1;Parent=MS.gene37329.t1
chr7.2 CDS 27380853 27381546 27380853 ID=cds.MS.gene37329.t1;Parent=MS.gene37329.t1
chr7.2 exon 27381698 27382368 27381698 ID=MS.gene37329.t1.exon2;Parent=MS.gene37329.t1
chr7.2 CDS 27381698 27382368 27381698 ID=cds.MS.gene37329.t1;Parent=MS.gene37329.t1
Gene Sequence

>MS.gene37329

ATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAATCAAGACACATGTATTGAAGGGTTTGAAGGCACTGATAGACATCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGGTAAGATTGCAGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTTTTGGTAAGTAGAGTTCTTATTTAACAGTATTTCTCTAGCGTAAGGAATTGAAATCTGTGTTTTTTGTACTATCACCTACATATTGAAAAGAGTGTGTTAGAGAATGAATTGGTATATACTGAATTGGTTGATAATTTGAAATGTTAATGTGTAGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTCCGGAACACTGCTGGACCGGTAAACCATCAAGCCGTGGCATTGCGTGTCGATTCAGACCAATCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCACTGAGACAGTTCTACCGTGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGGAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGCTTCACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTTGAGTGGCTCGGTAACTTTGCATTAGACACTTTGTGGTACGGTGAATACAGGAATTATGGACCCGGTTCATCGCTCGCTGGTAGAGTCAAATGGCCTGGTTATCATGTCATTAAAGACGCTTCTGCCGCCGGTTATTTTACGGTTCAGCGGTTCCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTGTTAAGTTCACAGCAGGGCTAAGCAATTGA
Protein sequence

>MS.gene37329.t1

MTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRHLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHGKIADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHVIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN