AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37623

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37623.t1 MTR_5g088220 97.006 501 11 4 1 501 1 497 0.0 960
MS.gene37623.t1 MTR_7g088140 52.357 403 145 9 122 495 82 466 1.23e-109 334
MS.gene37623.t1 MTR_7g088140 54.324 370 129 6 122 463 82 439 3.71e-109 333
MS.gene37623.t1 MTR_8g463890 46.341 246 119 5 100 343 12 246 5.57e-60 204
MS.gene37623.t1 MTR_4g088010 43.049 223 118 1 121 343 30 243 1.63e-58 197
MS.gene37623.t1 MTR_1g073690 24.265 272 184 5 162 416 1 267 2.07e-18 88.2
MS.gene37623.t1 MTR_3g116130 40.625 96 52 1 163 258 25 115 2.08e-18 85.9
MS.gene37623.t1 MTR_3g116130 40.625 96 52 1 163 258 25 115 9.95e-18 85.1
MS.gene37623.t1 MTR_2g026180 25.000 192 120 4 162 339 1 182 1.27e-16 82.8
MS.gene37623.t1 MTR_5g097580 25.532 282 158 10 168 421 7 264 2.53e-16 82.0
MS.gene37623.t1 MTR_5g097580 25.532 282 158 10 168 421 7 264 2.59e-16 81.6
MS.gene37623.t1 MTR_6g004810 26.163 172 118 3 168 338 46 209 4.55e-16 80.5
MS.gene37623.t1 MTR_5g064120 40.741 81 48 0 163 243 12 92 1.03e-15 77.8
MS.gene37623.t1 MTR_8g024520 40.964 83 49 0 163 245 21 103 2.75e-15 76.6
MS.gene37623.t1 MTR_8g024520 40.964 83 49 0 163 245 21 103 2.83e-15 76.6
MS.gene37623.t1 MTR_3g055990 24.590 183 120 3 168 339 7 182 7.50e-15 77.4
MS.gene37623.t1 MTR_3g055990 24.590 183 120 3 168 339 7 182 7.64e-15 77.4
MS.gene37623.t1 MTR_7g117495 38.554 83 51 0 163 245 14 96 2.31e-14 73.6
MS.gene37623.t1 MTR_3g092490 37.931 87 54 0 163 249 22 108 2.55e-14 71.6
MS.gene37623.t1 MTR_7g117495 38.554 83 51 0 163 245 14 96 2.62e-14 73.2
MS.gene37623.t1 MTR_3g092490 37.931 87 54 0 163 249 22 108 2.69e-14 73.2
MS.gene37623.t1 MTR_4g035310 38.554 83 51 0 163 245 12 94 2.94e-14 73.6
MS.gene37623.t1 MTR_3g092490 37.931 87 54 0 163 249 22 108 2.96e-14 73.2
MS.gene37623.t1 MTR_4g035310 38.554 83 51 0 163 245 12 94 3.61e-14 73.2
MS.gene37623.t1 MTR_5g017280 24.224 161 114 3 167 327 4 156 7.00e-14 73.9
MS.gene37623.t1 MTR_5g017280 24.224 161 114 3 167 327 4 156 1.01e-13 73.2
MS.gene37623.t1 MTR_3g082650 24.375 160 113 2 168 327 19 170 3.02e-13 71.6
MS.gene37623.t1 MTR_8g092550 28.230 209 124 5 148 340 183 381 5.75e-13 71.6
MS.gene37623.t1 MTR_3g095230 27.619 210 125 5 148 340 196 395 1.40e-11 67.4
MS.gene37623.t1 MTR_3g095230 27.619 210 125 5 148 340 196 395 1.89e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37623.t1 AT2G41060 47.776 517 186 15 1 500 1 450 9.59e-131 387
MS.gene37623.t1 AT2G41060 47.776 517 186 15 1 500 1 450 9.59e-131 387
MS.gene37623.t1 AT2G41060 47.776 517 186 15 1 500 1 450 9.59e-131 387
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G56860 55.932 413 131 12 115 501 91 478 6.96e-129 384
MS.gene37623.t1 AT3G15010 44.889 225 120 1 120 344 28 248 6.62e-61 205
MS.gene37623.t1 AT3G15010 44.889 225 120 1 120 344 28 248 6.62e-61 205
MS.gene37623.t1 AT2G22090 49.606 127 64 0 120 246 57 183 3.70e-35 134
MS.gene37623.t1 AT2G22090 40.000 90 54 0 259 348 100 189 8.43e-13 70.1
MS.gene37623.t1 AT2G22090 49.606 127 64 0 120 246 57 183 5.21e-35 134
MS.gene37623.t1 AT2G22090 40.000 90 54 0 259 348 100 189 8.29e-13 70.1
MS.gene37623.t1 AT2G22100 44.681 141 71 1 114 254 110 243 2.15e-33 130
MS.gene37623.t1 AT2G19380 45.802 131 71 0 116 246 357 487 1.11e-31 129
MS.gene37623.t1 AT1G76460 42.424 99 50 2 163 255 20 117 1.10e-17 84.0
MS.gene37623.t1 AT1G20880 43.373 83 47 0 163 245 20 102 1.27e-17 83.6
MS.gene37623.t1 AT1G20880 43.373 83 47 0 163 245 20 102 1.27e-17 83.6
MS.gene37623.t1 AT1G20880 43.373 83 47 0 163 245 20 102 1.27e-17 83.6
MS.gene37623.t1 AT5G40490 26.163 172 118 2 168 338 43 206 4.42e-17 84.0
MS.gene37623.t1 AT1G22330 40.000 90 53 1 163 251 13 102 4.27e-16 79.3
MS.gene37623.t1 AT1G22330 32.075 106 66 1 256 355 10 115 2.37e-11 65.1
MS.gene37623.t1 AT3G07810 25.397 189 113 4 168 339 7 184 5.16e-16 80.9
MS.gene37623.t1 AT3G07810 25.397 189 113 4 168 339 7 184 6.60e-16 80.5
MS.gene37623.t1 AT1G17640 27.564 156 108 3 168 323 67 217 7.46e-16 79.7
MS.gene37623.t1 AT1G17640 27.564 156 108 3 168 323 67 217 7.46e-16 79.7
MS.gene37623.t1 AT1G17640 27.564 156 108 3 168 323 67 217 7.46e-16 79.7
MS.gene37623.t1 AT4G26650 25.543 184 124 3 168 339 16 198 1.63e-15 79.3
MS.gene37623.t1 AT2G46780 39.362 94 57 0 162 255 17 110 1.79e-15 78.2
MS.gene37623.t1 AT2G46780 39.362 94 57 0 162 255 17 110 1.79e-15 78.2
MS.gene37623.t1 AT4G26650 25.543 184 124 3 168 339 13 195 1.98e-15 79.0
MS.gene37623.t1 AT1G78260 39.506 81 49 0 163 243 13 93 2.12e-15 77.0
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 2.76e-15 78.6
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 2.76e-15 78.6
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 2.76e-15 78.6
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 2.76e-15 78.6
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 2.76e-15 78.6
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 3.68e-15 78.2
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 3.68e-15 78.2
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 3.68e-15 78.2
MS.gene37623.t1 AT5G55550 24.865 185 121 4 168 339 7 186 3.68e-15 78.2
MS.gene37623.t1 AT1G78260 39.506 81 49 0 163 243 13 93 8.29e-15 75.1
MS.gene37623.t1 AT4G36960 24.157 178 116 4 167 339 3 166 9.28e-15 76.3
MS.gene37623.t1 AT4G36960 24.157 178 116 4 167 339 3 166 9.28e-15 76.3
MS.gene37623.t1 AT5G47620 23.280 189 115 3 168 339 7 182 9.29e-15 76.6
MS.gene37623.t1 AT5G47620 23.280 189 115 3 168 339 7 182 9.29e-15 76.6
MS.gene37623.t1 AT5G47620 23.280 189 115 3 168 339 7 182 9.29e-15 76.6
MS.gene37623.t1 AT3G06970 43.590 78 44 0 168 245 13 90 9.68e-15 75.5
MS.gene37623.t1 AT1G22910 40.964 83 49 0 163 245 9 91 2.28e-14 73.6
MS.gene37623.t1 AT1G22910 40.964 83 49 0 163 245 9 91 2.72e-14 73.2
MS.gene37623.t1 AT5G53680 36.364 99 59 1 161 255 7 105 2.32e-13 68.6
MS.gene37623.t1 AT1G22910 40.964 83 49 0 163 245 9 91 2.87e-13 71.6
MS.gene37623.t1 AT4G14300 21.939 196 125 4 162 339 1 186 4.68e-13 71.2
MS.gene37623.t1 AT4G14300 21.939 196 125 4 162 339 1 186 4.68e-13 71.2
MS.gene37623.t1 AT1G33470 37.349 83 52 0 163 245 3 85 5.49e-13 69.3
MS.gene37623.t1 AT2G33410 22.652 181 130 2 168 339 7 186 5.82e-13 70.9
MS.gene37623.t1 AT1G33470 37.349 83 52 0 163 245 3 85 8.08e-13 68.9
MS.gene37623.t1 AT1G33470 37.349 83 52 0 163 245 3 85 8.43e-13 68.6
MS.gene37623.t1 AT5G40490 24.823 141 98 1 187 327 45 177 1.86e-12 69.3
MS.gene37623.t1 AT3G13224 24.845 161 115 1 167 327 10 164 1.95e-12 68.9
MS.gene37623.t1 AT3G54770 38.554 83 51 0 163 245 13 95 2.37e-12 67.8
MS.gene37623.t1 AT3G13224 24.375 160 115 1 168 327 20 173 2.53e-12 68.6
MS.gene37623.t1 AT3G54770 38.554 83 51 0 163 245 13 95 2.95e-12 67.4
MS.gene37623.t1 AT5G11412 36.471 85 54 0 161 245 46 130 1.73e-11 63.5
MS.gene37623.t1 AT1G60650 36.842 76 47 1 168 242 13 88 1.90e-11 65.5
MS.gene37623.t1 AT1G60650 36.842 76 47 1 168 242 13 88 1.90e-11 65.5
MS.gene37623.t1 AT5G53720 38.462 78 48 0 168 245 10 87 2.37e-11 60.8
MS.gene37623.t1 AT4G24770 23.626 182 132 5 168 345 151 329 3.41e-11 65.1
MS.gene37623.t1 AT4G24770 23.626 182 132 5 168 345 151 329 3.41e-11 65.1

Find 177 sgRNAs with CRISPR-Local

Find 191 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCGAAGCTTTCGTTTCT+TGG 0.186412 5.3:+70834997 None:intergenic
TCGGCTTGTTTGGTGGGTTC+AGG 0.212017 5.3:+70834968 None:intergenic
TACTTCTTCTTGTTGGGGTT+CGG 0.223272 5.3:+70834943 None:intergenic
GGGAATTTGCTTGGAGGTCT+TGG 0.253466 5.3:-70833690 MS.gene37623:CDS
TTCGGCTACTTCTTCTTGTT+GGG 0.255517 5.3:+70834937 None:intergenic
GCTGTGACTGATAAGAATTC+TGG 0.262013 5.3:-70834410 MS.gene37623:CDS
ATTTCTTCTTCTTGTGTTGT+TGG 0.272882 5.3:+70834908 None:intergenic
CTTCGGCTACTTCTTCTTGT+TGG 0.283404 5.3:+70834936 None:intergenic
ACTTCTTCTTGTTGGGGTTC+GGG 0.291185 5.3:+70834944 None:intergenic
TCCCGGTGGCGCTCCTTACA+TGG 0.295626 5.3:-70833526 MS.gene37623:CDS
TTCGGGTTCGGCTTGTTTGG+TGG 0.320019 5.3:+70834961 None:intergenic
CTTGACCCAGCTGAGGATTC+TGG 0.326079 5.3:+70833574 None:intergenic
TTCTTGTTGGGGTTCGGGTT+CGG 0.334657 5.3:+70834949 None:intergenic
AAAATCTTTGTTCATGGTCT+TGG 0.349785 5.3:-70834500 MS.gene37623:CDS
TGCCCCTCGAACACCTTATT+CGG 0.354163 5.3:+70834032 None:intergenic
TGCTGCTGCGTATGGTAATC+AGG 0.354467 5.3:-70833637 MS.gene37623:CDS
GAGGTGGATGATGGTCCATT+GGG 0.357481 5.3:-70834140 MS.gene37623:CDS
CAACGCCGGTGTGCCGGCTC+AGG 0.360674 5.3:-70833781 MS.gene37623:CDS
GCTATGGGATATGGCCAGCC+TGG 0.363089 5.3:-70833612 MS.gene37623:CDS
CACCGGAAAATCTTTGTTCA+TGG 0.376446 5.3:-70834506 MS.gene37623:CDS
GGCTTCGGCTGGACCTGTTC+CGG 0.376743 5.3:-70834279 MS.gene37623:CDS
CGGCTTGTTTGGTGGGTTCA+GGG 0.376961 5.3:+70834969 None:intergenic
AATCAGGCTGCTATGGGATA+TGG 0.385926 5.3:-70833621 MS.gene37623:CDS
CTTTGTTCATGGTCTTGGTT+GGG 0.386488 5.3:-70834495 MS.gene37623:CDS
CAAGGAGCTGGATTGGGACT+TGG 0.389500 5.3:-70833711 MS.gene37623:CDS
GGGTTCGGGTTCGGCTTGTT+TGG 0.394301 5.3:+70834958 None:intergenic
TTGGGACTTGGGAATTTGCT+TGG 0.397145 5.3:-70833699 MS.gene37623:CDS
TTGTGTTGTTGGTTCTTCTT+CGG 0.397521 5.3:+70834919 None:intergenic
AAGCAGCCGCAGAAAGTGAT+TGG 0.406418 5.3:-70834326 MS.gene37623:CDS
ACAAGAGGAAGATCTTGAAT+TGG 0.407627 5.3:-70834660 MS.gene37623:CDS
CAGGGATTGAATCCGGCTCT+TGG 0.407933 5.3:-70833762 MS.gene37623:CDS
TTCGGTGGAGGAGCCGGAAC+AGG 0.417847 5.3:+70834266 None:intergenic
TGAGGTTGATCTTCTTCAAT+CGG 0.424776 5.3:+70834881 None:intergenic
TGCTAATCAAGGAGCTGGAT+TGG 0.425869 5.3:-70833718 MS.gene37623:CDS
GGACTTGGGAATTTGCTTGG+AGG 0.433363 5.3:-70833696 MS.gene37623:CDS
TCTGCTTTGCTTGCTAATCA+AGG 0.433664 5.3:-70833729 MS.gene37623:CDS
CTGTGACTGATAAGAATTCT+GGG 0.435142 5.3:-70834409 MS.gene37623:CDS
TATTGTCAGAAGGCTGTTGA+TGG 0.441220 5.3:-70834002 MS.gene37623:CDS
TCAGACACCGGTGGCGCATT+CGG 0.442681 5.3:+70834248 None:intergenic
ATCACACGGTGGTCACTTGA+TGG 0.443713 5.3:-70833832 MS.gene37623:CDS
CGAACATTCTCAGACAGATC+TGG 0.446657 5.3:+70834554 None:intergenic
TGGTATTGTGGCTGCAACCC+AGG 0.451026 5.3:+70833594 None:intergenic
GGCGCATTCGGTGGAGGAGC+CGG 0.453295 5.3:+70834260 None:intergenic
TGGTTACAACGCCGGTGTGC+CGG 0.455193 5.3:-70833787 MS.gene37623:CDS
GCTAATCAAGGAGCTGGATT+GGG 0.456434 5.3:-70833717 MS.gene37623:CDS
CGGTGAAATTGAAGATTGTA+AGG 0.458299 5.3:-70834432 MS.gene37623:CDS
TCTTTGTTCATGGTCTTGGT+TGG 0.459374 5.3:-70834496 MS.gene37623:CDS
TGTAATTGCTCCTTCGTGAA+TGG 0.461004 5.3:+70834608 None:intergenic
TAGGACTACATCGTGTCAAT+TGG 0.462310 5.3:-70834300 MS.gene37623:CDS
CGCAGAAAGTGATTGGGAAT+AGG 0.466923 5.3:-70834319 MS.gene37623:CDS
TGGTCCATTGGGGTTGGATA+AGG 0.467413 5.3:-70834129 MS.gene37623:CDS
GTATGGTAATCAGGCTGCTA+TGG 0.467614 5.3:-70833628 MS.gene37623:CDS
GGCGTTGGAAGAGCCGAATA+AGG 0.467801 5.3:-70834045 MS.gene37623:CDS
ATTGAATCCGGCTCTTGGAC+AGG 0.468734 5.3:-70833757 MS.gene37623:CDS
CCTCAGCTGGGTCAAGGTGG+TGG 0.468825 5.3:-70833567 MS.gene37623:CDS
AGCATCGGACTGGGTGTCGT+CGG 0.471058 5.3:-70834355 MS.gene37623:CDS
TCGGGTTCGGCTTGTTTGGT+GGG 0.471504 5.3:+70834962 None:intergenic
ACCCATGTAAGGAGCGCCAC+CGG 0.472419 5.3:+70833524 None:intergenic
TTGCTTGCTAATCAAGGAGC+TGG 0.472566 5.3:-70833723 MS.gene37623:CDS
GGTTCTAGAAGCTTCTCAAC+AGG 0.476416 5.3:+70834629 None:intergenic
GCATCGGACTGGGTGTCGTC+GGG 0.476975 5.3:-70834354 MS.gene37623:CDS
TACATCGTGTCAATTGGCTT+CGG 0.478390 5.3:-70834294 MS.gene37623:CDS
ACAAACAGCGCAAAACCCTT+TGG 0.479302 5.3:+70834095 None:intergenic
GTCTGAGAATGTTCGTCAGC+TGG 0.480431 5.3:-70834546 MS.gene37623:CDS
GCCGGCTCAGGGATTGAATC+CGG 0.480635 5.3:-70833769 MS.gene37623:CDS
GAAGGCTGTTGATGGTCCTA+AGG 0.480805 5.3:-70833994 MS.gene37623:CDS
AGAGGTGGATGATGGTCCAT+TGG 0.483246 5.3:-70834141 MS.gene37623:CDS
GGTTGCAGAAGAAGAAGAAG+AGG 0.484187 5.3:-70834822 MS.gene37623:CDS
CACCATCACGGTGGTGGTGG+TGG 0.484347 5.3:-70833906 MS.gene37623:CDS
AATTTGCTTGGAGGTCTTGG+TGG 0.484936 5.3:-70833687 MS.gene37623:CDS
CTGATGTGGACCCCGCTCAC+CGG 0.485472 5.3:-70834523 MS.gene37623:CDS
TCCTCCACCGAATGCGCCAC+CGG 0.486406 5.3:-70834255 MS.gene37623:CDS
AAGGAGCTGGATTGGGACTT+GGG 0.487129 5.3:-70833710 MS.gene37623:CDS
ATTGTGGCTGCAACCCAGGC+TGG 0.487864 5.3:+70833598 None:intergenic
GGAGGACCAGCTTGATTCAC+CGG 0.487882 5.3:+70833660 None:intergenic
GGTCACTTGATGGCTCCTAC+TGG 0.489465 5.3:-70833822 MS.gene37623:CDS
CGCTCCTTACATGGGTCACT+AGG 0.492696 5.3:-70833517 None:intergenic
TCAAGTGACCACCGTGTGAT+GGG 0.493869 5.3:+70833835 None:intergenic
ATGGCTCCTACTGGTCCTGC+TGG 0.494184 5.3:-70833813 MS.gene37623:CDS
TCGTGTCAATTGGCTTCGGC+TGG 0.495359 5.3:-70834290 MS.gene37623:CDS
GCGCCACCGGGACCAGGATG+AGG 0.495486 5.3:+70833537 None:intergenic
ACCGGTGGCGCATTCGGTGG+AGG 0.495710 5.3:+70834254 None:intergenic
AAGCTTTCGTTTCTTGGCCA+TGG 0.498024 5.3:+70835003 None:intergenic
CTCACCTAGTGACCCATGTA+AGG 0.500179 5.3:+70833513 None:intergenic
AAGTATTCACATGGTGGTGG+TGG 0.503763 5.3:-70833858 MS.gene37623:CDS
ACAATACCAGAATCCTCAGC+TGG 0.504026 5.3:-70833580 MS.gene37623:CDS
CTATGGGATATGGCCAGCCT+GGG 0.505656 5.3:-70833611 MS.gene37623:CDS
CCTACTGGTCCTGCTGGTGG+TGG 0.506260 5.3:-70833807 MS.gene37623:CDS
TGCGCTGTTTGTTTATAAGA+CGG 0.506286 5.3:-70834084 MS.gene37623:CDS
ATCAAGTGACCACCGTGTGA+TGG 0.507458 5.3:+70833834 None:intergenic
GACGGTTGAGAGTGCTAAGA+AGG 0.508593 5.3:-70834066 MS.gene37623:CDS
GCCGGATTCAATCCCTGAGC+CGG 0.510375 5.3:+70833768 None:intergenic
GACAAAGCCTGTCCAAGAGC+CGG 0.512535 5.3:+70833750 None:intergenic
TAAGGAGCGCCACCGGGACC+AGG 0.518273 5.3:+70833531 None:intergenic
TCGGCTACTTCTTCTTGTTG+GGG 0.518576 5.3:+70834938 None:intergenic
GGATGATGGTCCATTGGGGT+TGG 0.519268 5.3:-70834135 MS.gene37623:CDS
TTGGGGTTGGATAAGGCGAC+TGG 0.520918 5.3:-70834122 MS.gene37623:CDS
AGCAGCCGCAGAAAGTGATT+GGG 0.521007 5.3:-70834325 MS.gene37623:CDS
TTCAAACAACGCTGCCGTGT+CGG 0.523374 5.3:-70834738 MS.gene37623:CDS
TGATTACCATACGCAGCAGC+AGG 0.524463 5.3:+70833639 None:intergenic
CCCGGTGGCGCTCCTTACAT+GGG 0.525317 5.3:-70833525 MS.gene37623:CDS
GTTAGACCTCATCCTGGTCC+CGG 0.526551 5.3:-70833543 MS.gene37623:CDS
AACGCCGGTGTGCCGGCTCA+GGG 0.526695 5.3:-70833780 MS.gene37623:CDS
CATCACCATCACGGTGGTGG+TGG 0.527530 5.3:-70833909 MS.gene37623:CDS
TATGGTAATCAGGCTGCTAT+GGG 0.529499 5.3:-70833627 MS.gene37623:CDS
AGCTGAGGATTCTGGTATTG+TGG 0.529596 5.3:+70833582 None:intergenic
GGTCCTCCTGCTGCTGCGTA+TGG 0.531826 5.3:-70833645 MS.gene37623:CDS
AGGTGAAGAAGAGCAAGAAG+AGG 0.532986 5.3:-70834846 MS.gene37623:CDS
TGGAGGTCTTGGTGGTGCGC+CGG 0.533288 5.3:-70833679 MS.gene37623:CDS
CTTTGAGTATACTCAGACAC+CGG 0.535878 5.3:+70834236 None:intergenic
CAATAACAACGAAGAACAAG+AGG 0.537174 5.3:-70834675 MS.gene37623:CDS
TTTCAAGCAGTTTGGAGAGG+TGG 0.539323 5.3:-70834156 MS.gene37623:CDS
CCCATGTAAGGAGCGCCACC+GGG 0.540286 5.3:+70833525 None:intergenic
CAGTTTGGAGAGGTGGATGA+TGG 0.542414 5.3:-70834149 MS.gene37623:CDS
TGTTCGTCAGCTGGCTGATG+TGG 0.543983 5.3:-70834537 MS.gene37623:CDS
TGAAGAAGAGCAAGAAGAGG+AGG 0.546641 5.3:-70834843 MS.gene37623:CDS
GACACCGGTGGCGCATTCGG+TGG 0.554738 5.3:+70834251 None:intergenic
GAGCCGAATAAGGTGTTCGA+GGG 0.557980 5.3:-70834035 MS.gene37623:CDS
CTATTCCCAATCACTTTCTG+CGG 0.566327 5.3:+70834320 None:intergenic
TGAGAGTGCTAAGAAGGCGT+TGG 0.568548 5.3:-70834060 MS.gene37623:CDS
GCTCCTACTGGTCCTGCTGG+TGG 0.571468 5.3:-70833810 MS.gene37623:CDS
GCATACTTTGTATTGTCAGA+AGG 0.572781 5.3:-70834012 MS.gene37623:CDS
TGGTCCTAAGGGTTACAACA+AGG 0.573830 5.3:-70833982 MS.gene37623:CDS
CAGAATCCTCAGCTGGGTCA+AGG 0.575625 5.3:-70833573 MS.gene37623:CDS
CCTAGAAAATCAACAACAAG+AGG 0.576213 5.3:-70834774 MS.gene37623:CDS
GGTGGTGTTAGACCTCATCC+TGG 0.576645 5.3:-70833549 MS.gene37623:CDS
AAGGCGACTGGGAAGCCAAA+GGG 0.581826 5.3:-70834110 MS.gene37623:CDS
GGTGGTGGTGGCCCATCACA+CGG 0.582405 5.3:-70833846 MS.gene37623:CDS
GCGTTGTAACCACCACCAGC+AGG 0.582900 5.3:+70833798 None:intergenic
CATCATCACCATCACGGTGG+TGG 0.584236 5.3:-70833912 MS.gene37623:CDS
AGAGCCGAATAAGGTGTTCG+AGG 0.585996 5.3:-70834036 MS.gene37623:CDS
AAGAATTCTGGGAAATCGAA+AGG 0.586836 5.3:-70834398 MS.gene37623:CDS
AAGGCTGTTGATGGTCCTAA+GGG 0.587938 5.3:-70833993 MS.gene37623:CDS
GGTGCGCCGGTGAATCAAGC+TGG 0.587980 5.3:-70833666 MS.gene37623:CDS
GTCGGAGCAGACTGTGAAGG+TGG 0.597030 5.3:-70834720 MS.gene37623:CDS
GTCCTAAGGGTTACAACAAG+GGG 0.599613 5.3:-70833980 MS.gene37623:CDS
AGGTGGATGATGGTCCATTG+GGG 0.599675 5.3:-70834139 MS.gene37623:CDS
GGTCCTAAGGGTTACAACAA+GGG 0.601882 5.3:-70833981 MS.gene37623:CDS
AAGAAGTATTCACATGGTGG+TGG 0.603956 5.3:-70833861 MS.gene37623:CDS
CAATCCCTGAGCCGGCACAC+CGG 0.607582 5.3:+70833776 None:intergenic
TGGGGTTGGATAAGGCGACT+GGG 0.613826 5.3:-70834121 MS.gene37623:CDS
GTCGCCTTATCCAACCCCAA+TGG 0.615111 5.3:+70834125 None:intergenic
CGTGTCGGAGCAGACTGTGA+AGG 0.617761 5.3:-70834723 MS.gene37623:CDS
ACACGTGCTTGTGAAGCAAG+CGG 0.622021 5.3:-70834588 MS.gene37623:CDS
CAACCTCAAAACGAAGGAGA+AGG 0.623160 5.3:-70834866 MS.gene37623:CDS
AAGGTGGAAGCTAACGGTGG+TGG 0.624235 5.3:-70834704 MS.gene37623:CDS
TAAGGCGACTGGGAAGCCAA+AGG 0.624508 5.3:-70834111 MS.gene37623:CDS
CCACCACCAGCAGGACCAGT+AGG 0.625255 5.3:+70833807 None:intergenic
GTGGTGGTCACTACAATCCA+AGG 0.627985 5.3:-70833890 MS.gene37623:CDS
GCTGGTGGTGGTTACAACGC+CGG 0.630397 5.3:-70833795 MS.gene37623:CDS
AATCAACAACAAGAGGGTGG+CGG 0.641401 5.3:-70834767 MS.gene37623:CDS
GAAGATCAACCTCAAAACGA+AGG 0.642987 5.3:-70834872 MS.gene37623:CDS
TTCACCGTACTTCGAAAACG+TGG 0.643668 5.3:+70834448 None:intergenic
CAATACCAGAATCCTCAGCT+GGG 0.650944 5.3:-70833579 MS.gene37623:CDS
CGGTGTCTGAGTATACTCAA+AGG 0.652912 5.3:-70834235 MS.gene37623:CDS
AGACCTCATCCTGGTCCCGG+TGG 0.660243 5.3:-70833540 MS.gene37623:CDS
CCACCACCTTGACCCAGCTG+AGG 0.661990 5.3:+70833567 None:intergenic
CATTCGCATCATCACCATCA+CGG 0.665008 5.3:-70833918 MS.gene37623:CDS
GAAAAGAAGTATTCACATGG+TGG 0.667361 5.3:-70833864 MS.gene37623:CDS
ACCGTACTTCGAAAACGTGG+TGG 0.667699 5.3:+70834451 None:intergenic
AATCCTCAGCTGGGTCAAGG+TGG 0.672405 5.3:-70833570 MS.gene37623:CDS
GAAAATCAACAACAAGAGGG+TGG 0.674797 5.3:-70834770 MS.gene37623:CDS
TTACCATACGCAGCAGCAGG+AGG 0.677100 5.3:+70833642 None:intergenic
ACTGTGAAGGTGGAAGCTAA+CGG 0.678694 5.3:-70834710 MS.gene37623:CDS
CTTCACAGTCTGCTCCGACA+CGG 0.679380 5.3:+70834724 None:intergenic
AGCCGAATAAGGTGTTCGAG+GGG 0.683238 5.3:-70834034 MS.gene37623:CDS
GAAGAAGAGGATGATCAACA+AGG 0.685106 5.3:-70834809 MS.gene37623:CDS
CTAGAAAATCAACAACAAGA+GGG 0.690323 5.3:-70834773 MS.gene37623:CDS
TGGTGATGATGCGAATGATG+CGG 0.691685 5.3:+70833924 None:intergenic
TGAGTATACTCAGACACCGG+TGG 0.708396 5.3:+70834239 None:intergenic
AAAGAAAAGAAGTATTCACA+TGG 0.713599 5.3:-70833867 MS.gene37623:CDS
GCTTCTAGAACCATTCACGA+AGG 0.714086 5.3:-70834618 MS.gene37623:CDS
TCCTAAGGGTTACAACAAGG+GGG 0.727464 5.3:-70833979 MS.gene37623:CDS
CCTAAGGGTTACAACAAGGG+GGG 0.736362 5.3:-70833978 MS.gene37623:CDS
GGTGGTGGCCCATCACACGG+TGG 0.744986 5.3:-70833843 MS.gene37623:CDS
TCGCATCATCACCATCACGG+TGG 0.781979 5.3:-70833915 MS.gene37623:CDS
GTGAAGGTGGAAGCTAACGG+TGG 0.792915 5.3:-70834707 MS.gene37623:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTTTGTTTAAGCAT+CGG - chr5.3:70834149-70834168 MS.gene37623:CDS 20.0%
!!! AAAGAAAAGAAGTATTCACA+TGG - chr5.3:70834652-70834671 MS.gene37623:CDS 25.0%
AAAATCTTTGTTCATGGTCT+TGG - chr5.3:70834019-70834038 MS.gene37623:CDS 30.0%
ATTTCTTCTTCTTGTGTTGT+TGG + chr5.3:70833614-70833633 None:intergenic 30.0%
CTAGAAAATCAACAACAAGA+GGG - chr5.3:70833746-70833765 MS.gene37623:CDS 30.0%
! GAATACTTCTTTTCTTTCCT+TGG + chr5.3:70834649-70834668 None:intergenic 30.0%
!!! CTCTTGTTGTTGATTTTCTA+GGG + chr5.3:70833747-70833766 None:intergenic 30.0%
ACAAGAGGAAGATCTTGAAT+TGG - chr5.3:70833859-70833878 MS.gene37623:CDS 35.0%
CAATAACAACGAAGAACAAG+AGG - chr5.3:70833844-70833863 MS.gene37623:CDS 35.0%
CCTAGAAAATCAACAACAAG+AGG - chr5.3:70833745-70833764 MS.gene37623:CDS 35.0%
CGGTGAAATTGAAGATTGTA+AGG - chr5.3:70834087-70834106 MS.gene37623:CDS 35.0%
CTGTGACTGATAAGAATTCT+GGG - chr5.3:70834110-70834129 MS.gene37623:CDS 35.0%
GCATACTTTGTATTGTCAGA+AGG - chr5.3:70834507-70834526 MS.gene37623:CDS 35.0%
TGCGCTGTTTGTTTATAAGA+CGG - chr5.3:70834435-70834454 MS.gene37623:CDS 35.0%
! AAGAATTCTGGGAAATCGAA+AGG - chr5.3:70834121-70834140 MS.gene37623:CDS 35.0%
! GACCATGAACAAAGATTTTC+CGG + chr5.3:70834018-70834037 None:intergenic 35.0%
! TGAGGTTGATCTTCTTCAAT+CGG + chr5.3:70833641-70833660 None:intergenic 35.0%
!! GAAAAGAAGTATTCACATGG+TGG - chr5.3:70834655-70834674 MS.gene37623:CDS 35.0%
!! TTGTGTTGTTGGTTCTTCTT+CGG + chr5.3:70833603-70833622 None:intergenic 35.0%
!!! ATTTTGTTTAAGCATCGGAC+TGG - chr5.3:70834154-70834173 MS.gene37623:CDS 35.0%
!!! CCTCTTGTTGTTGATTTTCT+AGG + chr5.3:70833748-70833767 None:intergenic 35.0%
!!! CTTGAGTTTTTCAAGCAGTT+TGG - chr5.3:70834355-70834374 MS.gene37623:CDS 35.0%
!!! TTTTGTTTAAGCATCGGACT+GGG - chr5.3:70834155-70834174 MS.gene37623:CDS 35.0%
AAAAACTCAAGCAGCTTCTG+AGG + chr5.3:70834346-70834365 None:intergenic 40.0%
AGATCGAAGCTTTCGTTTCT+TGG + chr5.3:70833525-70833544 None:intergenic 40.0%
CACCGGAAAATCTTTGTTCA+TGG - chr5.3:70834013-70834032 MS.gene37623:CDS 40.0%
CTATTCCCAATCACTTTCTG+CGG + chr5.3:70834202-70834221 None:intergenic 40.0%
CTTTGAGTATACTCAGACAC+CGG + chr5.3:70834286-70834305 None:intergenic 40.0%
GAAAATCAACAACAAGAGGG+TGG - chr5.3:70833749-70833768 MS.gene37623:CDS 40.0%
GAAGAAGAGGATGATCAACA+AGG - chr5.3:70833710-70833729 MS.gene37623:CDS 40.0%
GAAGATCAACCTCAAAACGA+AGG - chr5.3:70833647-70833666 MS.gene37623:CDS 40.0%
GCTGTGACTGATAAGAATTC+TGG - chr5.3:70834109-70834128 MS.gene37623:CDS 40.0%
TACTTCTTCTTGTTGGGGTT+CGG + chr5.3:70833579-70833598 None:intergenic 40.0%
TAGGACTACATCGTGTCAAT+TGG - chr5.3:70834219-70834238 MS.gene37623:CDS 40.0%
TATGGTAATCAGGCTGCTAT+GGG - chr5.3:70834892-70834911 MS.gene37623:CDS 40.0%
TATTGTCAGAAGGCTGTTGA+TGG - chr5.3:70834517-70834536 MS.gene37623:CDS 40.0%
TGTAATTGCTCCTTCGTGAA+TGG + chr5.3:70833914-70833933 None:intergenic 40.0%
TTCGGCTACTTCTTCTTGTT+GGG + chr5.3:70833585-70833604 None:intergenic 40.0%
! AACAAAGATTTTCCGGTGAG+CGG + chr5.3:70834011-70834030 None:intergenic 40.0%
! CTTTGTTCATGGTCTTGGTT+GGG - chr5.3:70834024-70834043 MS.gene37623:CDS 40.0%
! TACATCGTGTCAATTGGCTT+CGG - chr5.3:70834225-70834244 MS.gene37623:CDS 40.0%
! TCTGCTTTGCTTGCTAATCA+AGG - chr5.3:70834790-70834809 MS.gene37623:CDS 40.0%
! TCTTTGTTCATGGTCTTGGT+TGG - chr5.3:70834023-70834042 MS.gene37623:CDS 40.0%
!! AAGAAGTATTCACATGGTGG+TGG - chr5.3:70834658-70834677 MS.gene37623:CDS 40.0%
!!! GTTTTTCAAGCAGTTTGGAG+AGG - chr5.3:70834360-70834379 MS.gene37623:CDS 40.0%
AATCAACAACAAGAGGGTGG+CGG - chr5.3:70833752-70833771 MS.gene37623:CDS 45.0%
AATCAGGCTGCTATGGGATA+TGG - chr5.3:70834898-70834917 MS.gene37623:CDS 45.0%
ACAAACAGCGCAAAACCCTT+TGG + chr5.3:70834427-70834446 None:intergenic 45.0%
ACAATACCAGAATCCTCAGC+TGG - chr5.3:70834939-70834958 MS.gene37623:CDS 45.0%
ACTGTGAAGGTGGAAGCTAA+CGG - chr5.3:70833809-70833828 MS.gene37623:CDS 45.0%
ACTTCTTCTTGTTGGGGTTC+GGG + chr5.3:70833578-70833597 None:intergenic 45.0%
AGCTGAGGATTCTGGTATTG+TGG + chr5.3:70834940-70834959 None:intergenic 45.0%
AGGTGAAGAAGAGCAAGAAG+AGG - chr5.3:70833673-70833692 MS.gene37623:CDS 45.0%
CAACCTCAAAACGAAGGAGA+AGG - chr5.3:70833653-70833672 MS.gene37623:CDS 45.0%
CAATACCAGAATCCTCAGCT+GGG - chr5.3:70834940-70834959 MS.gene37623:CDS 45.0%
CATTCGCATCATCACCATCA+CGG - chr5.3:70834601-70834620 MS.gene37623:CDS 45.0%
CGAACATTCTCAGACAGATC+TGG + chr5.3:70833968-70833987 None:intergenic 45.0%
CGCAGAAAGTGATTGGGAAT+AGG - chr5.3:70834200-70834219 MS.gene37623:CDS 45.0%
CGGTGTCTGAGTATACTCAA+AGG - chr5.3:70834284-70834303 MS.gene37623:CDS 45.0%
CTTCGGCTACTTCTTCTTGT+TGG + chr5.3:70833586-70833605 None:intergenic 45.0%
GCTAATCAAGGAGCTGGATT+GGG - chr5.3:70834802-70834821 MS.gene37623:CDS 45.0%
GGTCCTAAGGGTTACAACAA+GGG - chr5.3:70834538-70834557 MS.gene37623:CDS 45.0%
GGTTGCAGAAGAAGAAGAAG+AGG - chr5.3:70833697-70833716 MS.gene37623:CDS 45.0%
GTATGGTAATCAGGCTGCTA+TGG - chr5.3:70834891-70834910 MS.gene37623:CDS 45.0%
GTCCTAAGGGTTACAACAAG+GGG - chr5.3:70834539-70834558 MS.gene37623:CDS 45.0%
TCCTAAGGGTTACAACAAGG+GGG - chr5.3:70834540-70834559 MS.gene37623:CDS 45.0%
TCGGCTACTTCTTCTTGTTG+GGG + chr5.3:70833584-70833603 None:intergenic 45.0%
TGAAGAAGAGCAAGAAGAGG+AGG - chr5.3:70833676-70833695 MS.gene37623:CDS 45.0%
TGCTAATCAAGGAGCTGGAT+TGG - chr5.3:70834801-70834820 MS.gene37623:CDS 45.0%
TGGTCCTAAGGGTTACAACA+AGG - chr5.3:70834537-70834556 MS.gene37623:CDS 45.0%
TTCACCGTACTTCGAAAACG+TGG + chr5.3:70834074-70834093 None:intergenic 45.0%
TTTCAAGCAGTTTGGAGAGG+TGG - chr5.3:70834363-70834382 MS.gene37623:CDS 45.0%
! AATTTGCTTGGAGGTCTTGG+TGG - chr5.3:70834832-70834851 MS.gene37623:CDS 45.0%
! ACAAAGATTTTCCGGTGAGC+GGG + chr5.3:70834010-70834029 None:intergenic 45.0%
! ACCACCACGTTTTCGAAGTA+CGG - chr5.3:70834067-70834086 MS.gene37623:CDS 45.0%
! TCACCTTCTCCTTCGTTTTG+AGG + chr5.3:70833659-70833678 None:intergenic 45.0%
! TGGTGATGATGCGAATGATG+CGG + chr5.3:70834598-70834617 None:intergenic 45.0%
! TTGCTTGCTAATCAAGGAGC+TGG - chr5.3:70834796-70834815 MS.gene37623:CDS 45.0%
! TTGGGACTTGGGAATTTGCT+TGG - chr5.3:70834820-70834839 MS.gene37623:CDS 45.0%
!! AAGGCTGTTGATGGTCCTAA+GGG - chr5.3:70834526-70834545 MS.gene37623:CDS 45.0%
!! AAGTATTCACATGGTGGTGG+TGG - chr5.3:70834661-70834680 MS.gene37623:CDS 45.0%
!! GCTTCTAGAACCATTCACGA+AGG - chr5.3:70833901-70833920 MS.gene37623:CDS 45.0%
!! GGTTCTAGAAGCTTCTCAAC+AGG + chr5.3:70833893-70833912 None:intergenic 45.0%
AAGCAGCCGCAGAAAGTGAT+TGG - chr5.3:70834193-70834212 MS.gene37623:CDS 50.0%
ACACGTGCTTGTGAAGCAAG+CGG - chr5.3:70833931-70833950 MS.gene37623:CDS 50.0%
ACCGTACTTCGAAAACGTGG+TGG + chr5.3:70834071-70834090 None:intergenic 50.0%
AGCAGCCGCAGAAAGTGATT+GGG - chr5.3:70834194-70834213 MS.gene37623:CDS 50.0%
ATCAAGTGACCACCGTGTGA+TGG + chr5.3:70834688-70834707 None:intergenic 50.0%
ATCACACGGTGGTCACTTGA+TGG - chr5.3:70834687-70834706 MS.gene37623:CDS 50.0%
ATTGAATCCGGCTCTTGGAC+AGG - chr5.3:70834762-70834781 MS.gene37623:CDS 50.0%
CAGTTTGGAGAGGTGGATGA+TGG - chr5.3:70834370-70834389 MS.gene37623:CDS 50.0%
CCTAAGGGTTACAACAAGGG+GGG - chr5.3:70834541-70834560 MS.gene37623:CDS 50.0%
GTCTGAGAATGTTCGTCAGC+TGG - chr5.3:70833973-70833992 MS.gene37623:CDS 50.0%
GTGGTGGTCACTACAATCCA+AGG - chr5.3:70834629-70834648 MS.gene37623:CDS 50.0%
TCAAGTGACCACCGTGTGAT+GGG + chr5.3:70834687-70834706 None:intergenic 50.0%
TGAGTATACTCAGACACCGG+TGG + chr5.3:70834283-70834302 None:intergenic 50.0%
TGATTACCATACGCAGCAGC+AGG + chr5.3:70834883-70834902 None:intergenic 50.0%
TGCCCCTCGAACACCTTATT+CGG + chr5.3:70834490-70834509 None:intergenic 50.0%
TGCTGCTGCGTATGGTAATC+AGG - chr5.3:70834882-70834901 MS.gene37623:CDS 50.0%
TGGTCCATTGGGGTTGGATA+AGG - chr5.3:70834390-70834409 MS.gene37623:CDS 50.0%
TTCAAACAACGCTGCCGTGT+CGG - chr5.3:70833781-70833800 MS.gene37623:CDS 50.0%
! AAGGAGCTGGATTGGGACTT+GGG - chr5.3:70834809-70834828 MS.gene37623:CDS 50.0%
! AGAGCCGAATAAGGTGTTCG+AGG - chr5.3:70834483-70834502 MS.gene37623:CDS 50.0%
! AGAGGTGGATGATGGTCCAT+TGG - chr5.3:70834378-70834397 MS.gene37623:CDS 50.0%
! AGCCGAATAAGGTGTTCGAG+GGG - chr5.3:70834485-70834504 MS.gene37623:CDS 50.0%
! AGGTGGATGATGGTCCATTG+GGG - chr5.3:70834380-70834399 MS.gene37623:CDS 50.0%
! CAAAGATTTTCCGGTGAGCG+GGG + chr5.3:70834009-70834028 None:intergenic 50.0%
! GAGCCGAATAAGGTGTTCGA+GGG - chr5.3:70834484-70834503 MS.gene37623:CDS 50.0%
! GAGGTGGATGATGGTCCATT+GGG - chr5.3:70834379-70834398 MS.gene37623:CDS 50.0%
! GGACTTGGGAATTTGCTTGG+AGG - chr5.3:70834823-70834842 MS.gene37623:CDS 50.0%
! GGGAATTTGCTTGGAGGTCT+TGG - chr5.3:70834829-70834848 MS.gene37623:CDS 50.0%
! TTCTTGTTGGGGTTCGGGTT+CGG + chr5.3:70833573-70833592 None:intergenic 50.0%
!! GAAGGCTGTTGATGGTCCTA+AGG - chr5.3:70834525-70834544 MS.gene37623:CDS 50.0%
!! GACGGTTGAGAGTGCTAAGA+AGG - chr5.3:70834453-70834472 MS.gene37623:CDS 50.0%
!! TGAGAGTGCTAAGAAGGCGT+TGG - chr5.3:70834459-70834478 MS.gene37623:CDS 50.0%
AAGGCGACTGGGAAGCCAAA+GGG - chr5.3:70834409-70834428 MS.gene37623:CDS 55.0%
AAGGTGGAAGCTAACGGTGG+TGG - chr5.3:70833815-70833834 MS.gene37623:CDS 55.0%
AATCCTCAGCTGGGTCAAGG+TGG - chr5.3:70834949-70834968 MS.gene37623:CDS 55.0%
CAGAATCCTCAGCTGGGTCA+AGG - chr5.3:70834946-70834965 MS.gene37623:CDS 55.0%
CAGGGATTGAATCCGGCTCT+TGG - chr5.3:70834757-70834776 MS.gene37623:CDS 55.0%
CATCATCACCATCACGGTGG+TGG - chr5.3:70834607-70834626 MS.gene37623:CDS 55.0%
CTATGGGATATGGCCAGCCT+GGG - chr5.3:70834908-70834927 MS.gene37623:CDS 55.0%
CTTCACAGTCTGCTCCGACA+CGG + chr5.3:70833798-70833817 None:intergenic 55.0%
CTTGACCCAGCTGAGGATTC+TGG + chr5.3:70834948-70834967 None:intergenic 55.0%
GACAAAGCCTGTCCAAGAGC+CGG + chr5.3:70834772-70834791 None:intergenic 55.0%
GGAGGACCAGCTTGATTCAC+CGG + chr5.3:70834862-70834881 None:intergenic 55.0%
GTCGCCTTATCCAACCCCAA+TGG + chr5.3:70834397-70834416 None:intergenic 55.0%
GTGAAGGTGGAAGCTAACGG+TGG - chr5.3:70833812-70833831 MS.gene37623:CDS 55.0%
GTTAGACCTCATCCTGGTCC+CGG - chr5.3:70834976-70834995 MS.gene37623:CDS 55.0%
TAAGGCGACTGGGAAGCCAA+AGG - chr5.3:70834408-70834427 MS.gene37623:CDS 55.0%
TCGCATCATCACCATCACGG+TGG - chr5.3:70834604-70834623 MS.gene37623:CDS 55.0%
TGGGGTTGGATAAGGCGACT+GGG - chr5.3:70834398-70834417 MS.gene37623:CDS 55.0%
TGGTATTGTGGCTGCAACCC+AGG + chr5.3:70834928-70834947 None:intergenic 55.0%
TGTTCGTCAGCTGGCTGATG+TGG - chr5.3:70833982-70834001 MS.gene37623:CDS 55.0%
TTACCATACGCAGCAGCAGG+AGG + chr5.3:70834880-70834899 None:intergenic 55.0%
TTGGGGTTGGATAAGGCGAC+TGG - chr5.3:70834397-70834416 MS.gene37623:CDS 55.0%
! CAAGGAGCTGGATTGGGACT+TGG - chr5.3:70834808-70834827 MS.gene37623:CDS 55.0%
! CCCCCCTTGTTGTAACCCTT+AGG + chr5.3:70834544-70834563 None:intergenic 55.0%
! GGATGATGGTCCATTGGGGT+TGG - chr5.3:70834384-70834403 MS.gene37623:CDS 55.0%
! GGCGTTGGAAGAGCCGAATA+AGG - chr5.3:70834474-70834493 MS.gene37623:CDS 55.0%
! GGTCACTTGATGGCTCCTAC+TGG - chr5.3:70834697-70834716 MS.gene37623:CDS 55.0%
! GGTGGTGTTAGACCTCATCC+TGG - chr5.3:70834970-70834989 MS.gene37623:CDS 55.0%
! TCGGGTTCGGCTTGTTTGGT+GGG + chr5.3:70833560-70833579 None:intergenic 55.0%
! TCGTGTCAATTGGCTTCGGC+TGG - chr5.3:70834229-70834248 MS.gene37623:CDS 55.0%
! TTCGGGTTCGGCTTGTTTGG+TGG + chr5.3:70833561-70833580 None:intergenic 55.0%
!! CGGCTTGTTTGGTGGGTTCA+GGG + chr5.3:70833553-70833572 None:intergenic 55.0%
!! TCGGCTTGTTTGGTGGGTTC+AGG + chr5.3:70833554-70833573 None:intergenic 55.0%
ATGGCTCCTACTGGTCCTGC+TGG - chr5.3:70834706-70834725 MS.gene37623:CDS 60.0%
ATTGTGGCTGCAACCCAGGC+TGG + chr5.3:70834924-70834943 None:intergenic 60.0%
CGTGTCGGAGCAGACTGTGA+AGG - chr5.3:70833796-70833815 MS.gene37623:CDS 60.0%
GCCGGATTCAATCCCTGAGC+CGG + chr5.3:70834754-70834773 None:intergenic 60.0%
GCGTTGTAACCACCACCAGC+AGG + chr5.3:70834724-70834743 None:intergenic 60.0%
GCTATGGGATATGGCCAGCC+TGG - chr5.3:70834907-70834926 MS.gene37623:CDS 60.0%
GTCGGAGCAGACTGTGAAGG+TGG - chr5.3:70833799-70833818 MS.gene37623:CDS 60.0%
TCAGACACCGGTGGCGCATT+CGG + chr5.3:70834274-70834293 None:intergenic 60.0%
TGGTTACAACGCCGGTGTGC+CGG - chr5.3:70834732-70834751 MS.gene37623:CDS 60.0%
! AGCATCGGACTGGGTGTCGT+CGG - chr5.3:70834164-70834183 MS.gene37623:CDS 60.0%
! CATCACCATCACGGTGGTGG+TGG - chr5.3:70834610-70834629 MS.gene37623:CDS 60.0%
! GCCGGCTCAGGGATTGAATC+CGG - chr5.3:70834750-70834769 MS.gene37623:CDS 60.0%
! GGGTTCGGGTTCGGCTTGTT+TGG + chr5.3:70833564-70833583 None:intergenic 60.0%
!! ACCCATGTAAGGAGCGCCAC+CGG + chr5.3:70834998-70835017 None:intergenic 60.0%
!! GCTGGTGGTGGTTACAACGC+CGG - chr5.3:70834724-70834743 MS.gene37623:CDS 60.0%
AGACCTCATCCTGGTCCCGG+TGG - chr5.3:70834979-70834998 MS.gene37623:CDS 65.0%
CAATCCCTGAGCCGGCACAC+CGG + chr5.3:70834746-70834765 None:intergenic 65.0%
CCACCACCAGCAGGACCAGT+AGG + chr5.3:70834715-70834734 None:intergenic 65.0%
CCACCACCTTGACCCAGCTG+AGG + chr5.3:70834955-70834974 None:intergenic 65.0%
CCCGGTGGCGCTCCTTACAT+GGG - chr5.3:70834994-70835013 MS.gene37623:CDS 65.0%
CCTACTGGTCCTGCTGGTGG+TGG - chr5.3:70834712-70834731 MS.gene37623:CDS 65.0%
CCTCAGCTGGGTCAAGGTGG+TGG - chr5.3:70834952-70834971 MS.gene37623:CDS 65.0%
CTGATGTGGACCCCGCTCAC+CGG - chr5.3:70833996-70834015 MS.gene37623:CDS 65.0%
GACCACCACCACCACCGTGA+TGG + chr5.3:70834618-70834637 None:intergenic 65.0%
GCTCCTACTGGTCCTGCTGG+TGG - chr5.3:70834709-70834728 MS.gene37623:CDS 65.0%
GGCTTCGGCTGGACCTGTTC+CGG - chr5.3:70834240-70834259 MS.gene37623:CDS 65.0%
GGTCCTCCTGCTGCTGCGTA+TGG - chr5.3:70834874-70834893 MS.gene37623:CDS 65.0%
TCCCGGTGGCGCTCCTTACA+TGG - chr5.3:70834993-70835012 MS.gene37623:CDS 65.0%
TCCTCCACCGAATGCGCCAC+CGG - chr5.3:70834264-70834283 MS.gene37623:CDS 65.0%
TTCGGTGGAGGAGCCGGAAC+AGG + chr5.3:70834256-70834275 None:intergenic 65.0%
! GCATCGGACTGGGTGTCGTC+GGG - chr5.3:70834165-70834184 MS.gene37623:CDS 65.0%
! GGTGCGCCGGTGAATCAAGC+TGG - chr5.3:70834853-70834872 MS.gene37623:CDS 65.0%
!! CACCATCACGGTGGTGGTGG+TGG - chr5.3:70834613-70834632 MS.gene37623:CDS 65.0%
!! CCCATGTAAGGAGCGCCACC+GGG + chr5.3:70834997-70835016 None:intergenic 65.0%
!! GGTGGTGGTGGCCCATCACA+CGG - chr5.3:70834673-70834692 MS.gene37623:CDS 65.0%
!! TGGAGGTCTTGGTGGTGCGC+CGG - chr5.3:70834840-70834859 MS.gene37623:CDS 65.0%
GACACCGGTGGCGCATTCGG+TGG + chr5.3:70834271-70834290 None:intergenic 70.0%
! ACCGGTGGCGCATTCGGTGG+AGG + chr5.3:70834268-70834287 None:intergenic 70.0%
! GGCGCATTCGGTGGAGGAGC+CGG + chr5.3:70834262-70834281 None:intergenic 70.0%
! GGTGGTGGCCCATCACACGG+TGG - chr5.3:70834676-70834695 MS.gene37623:CDS 70.0%
!! AACGCCGGTGTGCCGGCTCA+GGG - chr5.3:70834739-70834758 MS.gene37623:CDS 70.0%
!! TAAGGAGCGCCACCGGGACC+AGG + chr5.3:70834991-70835010 None:intergenic 70.0%
GCGCCACCGGGACCAGGATG+AGG + chr5.3:70834985-70835004 None:intergenic 75.0%
!! CAACGCCGGTGTGCCGGCTC+AGG - chr5.3:70834738-70834757 MS.gene37623:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 70833518 70835023 70833518 ID=MS.gene37623
chr5.3 mRNA 70833518 70835023 70833518 ID=MS.gene37623.t1;Parent=MS.gene37623
chr5.3 exon 70833518 70835023 70833518 ID=MS.gene37623.t1.exon1;Parent=MS.gene37623.t1
chr5.3 CDS 70833518 70835023 70833518 ID=cds.MS.gene37623.t1;Parent=MS.gene37623.t1
Gene Sequence

>MS.gene37623

ATGGCCAAGAAACGAAAGCTTCGATCTTCTGACCCTGAACCCACCAAACAAGCCGAACCCGAACCCCAACAAGAAGAAGTAGCCGAAGAAGAACCAACAACACAAGAAGAAGAAATCACACCGATTGAAGAAGATCAACCTCAAAACGAAGGAGAAGGTGAAGAAGAGCAAGAAGAGGAGGTTGCAGAAGAAGAAGAAGAGGATGATCAACAAGGAGAAGACGAAACCCTAGAAAATCAACAACAAGAGGGTGGCGGTGAAGCTTCAAACAACGCTGCCGTGTCGGAGCAGACTGTGAAGGTGGAAGCTAACGGTGGTGGTGAGAACAATAACAACGAAGAACAAGAGGAAGATCTTGAATTGGAAGATGAGCCTGTTGAGAAGCTTCTAGAACCATTCACGAAGGAGCAATTACACGTGCTTGTGAAGCAAGCGGTTGAGAAGTATCCAGATCTGTCTGAGAATGTTCGTCAGCTGGCTGATGTGGACCCCGCTCACCGGAAAATCTTTGTTCATGGTCTTGGTTGGGATGCTACTGCTGAAACGCTAACCACCACGTTTTCGAAGTACGGTGAAATTGAAGATTGTAAGGCTGTGACTGATAAGAATTCTGGGAAATCGAAAGGTTATGCTTTTATTTTGTTTAAGCATCGGACTGGGTGTCGTCGGGCGTTAAAGCAGCCGCAGAAAGTGATTGGGAATAGGACTACATCGTGTCAATTGGCTTCGGCTGGACCTGTTCCGGCTCCTCCACCGAATGCGCCACCGGTGTCTGAGTATACTCAAAGGAAGATTTTTGTGAGTAATGTGAGTTCTGATATTGATCCTCAGAAGCTGCTTGAGTTTTTCAAGCAGTTTGGAGAGGTGGATGATGGTCCATTGGGGTTGGATAAGGCGACTGGGAAGCCAAAGGGTTTTGCGCTGTTTGTTTATAAGACGGTTGAGAGTGCTAAGAAGGCGTTGGAAGAGCCGAATAAGGTGTTCGAGGGGCATACTTTGTATTGTCAGAAGGCTGTTGATGGTCCTAAGGGTTACAACAAGGGGGGTCATTATCAGCAGCAGCAACATCATCATCAGCCGCATCATTCGCATCATCACCATCACGGTGGTGGTGGTGGTCACTACAATCCAAGGAAAGAAAAGAAGTATTCACATGGTGGTGGTGGCCCATCACACGGTGGTCACTTGATGGCTCCTACTGGTCCTGCTGGTGGTGGTTACAACGCCGGTGTGCCGGCTCAGGGATTGAATCCGGCTCTTGGACAGGCTTTGTCTGCTTTGCTTGCTAATCAAGGAGCTGGATTGGGACTTGGGAATTTGCTTGGAGGTCTTGGTGGTGCGCCGGTGAATCAAGCTGGTCCTCCTGCTGCTGCGTATGGTAATCAGGCTGCTATGGGATATGGCCAGCCTGGGTTGCAGCCACAATACCAGAATCCTCAGCTGGGTCAAGGTGGTGGTGTTAGACCTCATCCTGGTCCCGGTGGCGCTCCTTACATGGGTCACTAG
Protein sequence

>MS.gene37623.t1

MAKKRKLRSSDPEPTKQAEPEPQQEEVAEEEPTTQEEEITPIEEDQPQNEGEGEEEQEEEVAEEEEEDDQQGEDETLENQQQEGGGEASNNAAVSEQTVKVEANGGGENNNNEEQEEDLELEDEPVEKLLEPFTKEQLHVLVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKNSGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKGYNKGGHYQQQQHHHQPHHSHHHHHGGGGGHYNPRKEKKYSHGGGGPSHGGHLMAPTGPAGGGYNAGVPAQGLNPALGQALSALLANQGAGLGLGNLLGGLGGAPVNQAGPPAAAYGNQAAMGYGQPGLQPQYQNPQLGQGGGVRPHPGPGGAPYMGH