AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051343


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051343.t1 MTR_4g094270 99.520 417 2 0 1 417 1 417 0.0 851
MS.gene051343.t1 MTR_7g099640 48.556 381 185 4 30 407 65 437 1.12e-114 343
MS.gene051343.t1 MTR_1g095660 52.125 353 152 6 61 403 25 370 1.88e-114 340
MS.gene051343.t1 MTR_1g069105 52.000 325 155 1 83 407 115 438 6.03e-114 341
MS.gene051343.t1 MTR_3g112260 48.603 358 169 2 58 401 24 380 9.84e-112 333
MS.gene051343.t1 MTR_3g117230 47.253 364 184 2 45 401 21 383 4.25e-111 332
MS.gene051343.t1 MTR_7g099640 48.209 363 177 4 30 389 65 419 3.79e-109 328
MS.gene051343.t1 MTR_1g083330 52.740 292 137 1 113 404 124 414 4.38e-106 320
MS.gene051343.t1 MTR_4g033235 52.740 292 137 1 113 404 125 415 5.32e-106 320
MS.gene051343.t1 MTR_3g062510 46.866 335 177 1 70 404 73 406 2.71e-104 315
MS.gene051343.t1 MTR_8g023550 49.568 347 149 5 61 403 72 396 2.94e-104 315
MS.gene051343.t1 MTR_1g069105 52.490 261 123 1 83 343 115 374 5.13e-91 280
MS.gene051343.t1 MTR_3g062510 49.632 272 136 1 70 341 73 343 8.84e-89 274
MS.gene051343.t1 MTR_6g059690 41.797 256 146 2 161 414 202 456 2.90e-61 210
MS.gene051343.t1 MTR_1g063380 44.915 236 126 2 158 393 207 438 3.15e-61 212
MS.gene051343.t1 MTR_1g063380 35.905 337 202 7 52 384 379 705 6.38e-61 211
MS.gene051343.t1 MTR_7g101870 34.043 376 221 8 52 410 380 745 3.45e-61 212
MS.gene051343.t1 MTR_7g101870 44.068 236 128 2 158 393 208 439 5.99e-60 208
MS.gene051343.t1 MTR_7g088850 41.870 246 142 1 139 384 265 509 5.71e-61 207
MS.gene051343.t1 MTR_7g088850 28.279 244 160 6 149 383 4 241 2.91e-20 93.2
MS.gene051343.t1 MTR_4g094662 42.276 246 140 2 157 402 230 473 6.88e-61 209
MS.gene051343.t1 MTR_2g095210 40.873 252 147 2 133 384 384 633 1.84e-60 209
MS.gene051343.t1 MTR_2g095210 48.315 89 46 0 151 239 202 290 1.24e-22 100
MS.gene051343.t1 MTR_2g095210 38.750 80 49 0 314 393 287 366 5.40e-11 65.1
MS.gene051343.t1 MTR_3g115110 40.304 263 153 3 149 409 240 500 3.03e-60 208
MS.gene051343.t1 MTR_2g438140 41.463 246 142 2 157 402 227 470 6.93e-60 206
MS.gene051343.t1 MTR_2g438140 41.463 246 142 2 157 402 287 530 1.40e-59 205
MS.gene051343.t1 MTR_7g010800 40.625 256 148 3 149 402 197 450 1.69e-59 205
MS.gene051343.t1 MTR_7g078570 35.913 323 182 5 114 414 132 451 1.64e-58 202
MS.gene051343.t1 MTR_7g096060 40.684 263 141 3 161 415 245 500 9.55e-58 201
MS.gene051343.t1 MTR_8g099605 40.637 251 141 2 158 401 165 414 2.79e-57 199
MS.gene051343.t1 MTR_8g099605 40.637 251 141 2 158 401 406 655 1.28e-56 200
MS.gene051343.t1 MTR_0376s0020 41.473 258 146 4 161 416 6 260 2.51e-56 194
MS.gene051343.t1 MTR_7g088980 42.276 246 141 1 139 384 119 363 1.32e-55 189
MS.gene051343.t1 MTR_2g095320 41.975 243 133 3 151 393 148 382 2.14e-55 195
MS.gene051343.t1 MTR_2g095320 39.224 232 127 3 153 384 418 635 5.79e-49 177
MS.gene051343.t1 MTR_7g088980 42.276 246 141 1 139 384 201 445 1.16e-54 189
MS.gene051343.t1 MTR_7g088980 33.129 163 100 4 219 377 14 171 1.10e-15 79.3
MS.gene051343.t1 MTR_7g088980 42.276 246 141 1 139 384 269 513 3.36e-54 189
MS.gene051343.t1 MTR_7g088980 35.242 227 132 5 159 377 20 239 1.15e-31 127
MS.gene051343.t1 MTR_5g069780 40.385 260 148 3 151 404 308 566 4.05e-54 192
MS.gene051343.t1 MTR_7g088980 42.276 246 141 1 139 384 295 539 4.15e-54 189
MS.gene051343.t1 MTR_7g088980 35.979 189 114 3 193 377 80 265 6.27e-27 113
MS.gene051343.t1 MTR_4g064350 39.453 256 152 2 161 414 325 579 1.89e-53 191
MS.gene051343.t1 MTR_3g462930 40.157 254 145 3 157 404 305 557 6.79e-53 189
MS.gene051343.t1 MTR_7g089040 39.163 263 156 2 152 412 681 941 4.85e-51 184
MS.gene051343.t1 MTR_7g089040 33.036 224 143 3 161 383 391 608 1.05e-31 128
MS.gene051343.t1 MTR_7g088830 38.403 263 158 2 152 412 654 914 5.27e-51 184
MS.gene051343.t1 MTR_7g088830 35.981 214 120 5 195 397 432 639 4.13e-30 123
MS.gene051343.t1 MTR_2g101290 38.866 247 145 3 150 394 409 651 1.12e-50 182
MS.gene051343.t1 MTR_2g101290 38.866 247 145 3 150 394 409 651 2.07e-50 182
MS.gene051343.t1 MTR_4g067100 39.921 253 140 5 157 401 381 629 2.54e-50 183
MS.gene051343.t1 MTR_4g067100 39.921 253 140 5 157 401 381 629 2.79e-50 183
MS.gene051343.t1 MTR_1g028390 38.976 254 149 2 157 410 330 577 1.65e-48 176
MS.gene051343.t1 MTR_6g016600 37.918 269 146 5 158 417 319 575 4.33e-48 173
MS.gene051343.t1 MTR_3g104470 38.866 247 146 2 156 402 224 465 5.41e-48 174
MS.gene051343.t1 MTR_3g096000 42.489 233 128 3 157 384 297 528 8.19e-48 175
MS.gene051343.t1 MTR_4g011810 36.054 294 154 7 150 416 236 522 1.34e-47 171
MS.gene051343.t1 MTR_3g104480 39.669 242 141 2 161 402 227 463 7.10e-47 171
MS.gene051343.t1 MTR_7g089290 37.903 248 148 5 148 392 659 903 7.55e-47 172
MS.gene051343.t1 MTR_7g089290 37.903 248 148 5 148 392 631 875 8.55e-47 172
MS.gene051343.t1 MTR_4g053350 40.650 246 133 8 139 380 110 346 7.22e-46 164
MS.gene051343.t1 MTR_2g078630 39.224 232 131 4 158 383 68 295 7.58e-46 170
MS.gene051343.t1 MTR_4g053350 40.650 246 133 8 139 380 110 346 7.62e-46 164
MS.gene051343.t1 MTR_2g078630 39.224 232 131 4 158 383 596 823 1.70e-45 169
MS.gene051343.t1 MTR_5g075340 38.000 250 146 3 155 402 228 470 2.37e-45 168
MS.gene051343.t1 MTR_2g007010 34.962 266 164 3 122 385 497 755 2.80e-44 164
MS.gene051343.t1 MTR_2g007010 37.959 245 129 5 161 392 243 477 5.01e-39 149
MS.gene051343.t1 MTR_2g086160 39.744 234 128 8 145 374 121 345 4.12e-44 157
MS.gene051343.t1 MTR_2g086160 39.167 240 133 8 145 380 121 351 1.01e-43 158
MS.gene051343.t1 MTR_4g096870 37.344 241 143 5 154 392 117 351 5.75e-43 155
MS.gene051343.t1 MTR_5g009840 38.095 231 134 5 157 384 517 741 7.04e-43 160
MS.gene051343.t1 MTR_7g075520 37.200 250 145 6 139 384 195 436 8.80e-43 157
MS.gene051343.t1 MTR_3g092070 38.889 234 132 5 155 384 80 306 2.56e-42 152
MS.gene051343.t1 MTR_3g092070 38.889 234 132 5 155 384 80 306 5.42e-42 152
MS.gene051343.t1 MTR_5g075360 36.290 248 153 3 163 410 23 265 7.96e-42 154
MS.gene051343.t1 MTR_5g075360 36.290 248 153 3 163 410 73 315 1.81e-41 154
MS.gene051343.t1 MTR_1g101870 40.260 231 129 5 157 384 558 782 2.06e-41 156
MS.gene051343.t1 MTR_1g101870 40.260 231 129 5 157 384 506 730 2.30e-41 156
MS.gene051343.t1 MTR_5g075360 36.290 248 153 3 163 410 199 441 6.89e-41 154
MS.gene051343.t1 MTR_5g075360 36.290 248 153 3 163 410 249 491 9.33e-41 154
MS.gene051343.t1 MTR_3g023900 34.680 297 163 5 141 410 516 808 9.91e-41 154
MS.gene051343.t1 MTR_3g023900 38.222 225 131 3 166 382 242 466 4.46e-39 149
MS.gene051343.t1 MTR_8g099065 36.910 233 138 5 155 384 533 759 9.99e-41 154
MS.gene051343.t1 MTR_1g088750 39.224 232 131 5 157 384 939 1164 1.13e-40 155
MS.gene051343.t1 MTR_1g088750 39.224 232 131 5 157 384 890 1115 1.14e-40 154
MS.gene051343.t1 MTR_3g023890 35.017 297 158 5 141 407 370 661 1.19e-40 153
MS.gene051343.t1 MTR_3g023890 38.222 225 121 7 159 373 96 312 1.12e-34 136
MS.gene051343.t1 MTR_1g099470 38.095 231 133 5 157 384 435 658 2.33e-40 153
MS.gene051343.t1 MTR_3g089100 38.938 226 128 5 157 378 932 1151 1.33e-39 151
MS.gene051343.t1 MTR_3g089100 38.938 226 128 5 157 378 898 1117 1.34e-39 151
MS.gene051343.t1 MTR_3g089100 38.938 226 128 5 157 378 903 1122 1.42e-39 151
MS.gene051343.t1 MTR_3g092080 38.034 234 134 5 155 384 83 309 2.51e-39 144
MS.gene051343.t1 MTR_3g092080 38.034 234 134 5 155 384 83 309 4.23e-39 145
MS.gene051343.t1 MTR_1g088730 36.638 232 137 5 157 384 933 1158 1.03e-38 149
MS.gene051343.t1 MTR_6g033740 37.931 232 132 7 157 384 501 724 2.18e-38 147
MS.gene051343.t1 MTR_1g099480 37.288 236 129 6 157 384 469 693 5.05e-37 144
MS.gene051343.t1 MTR_6g023855 35.496 262 146 9 133 384 224 472 9.78e-37 140
MS.gene051343.t1 MTR_4g088885 35.424 271 142 7 161 402 227 493 1.32e-36 142
MS.gene051343.t1 MTR_6g023875 31.597 288 166 9 150 416 376 653 3.11e-36 140
MS.gene051343.t1 MTR_3g104490 30.838 334 188 7 70 402 135 426 3.64e-36 140
MS.gene051343.t1 MTR_8g469460 31.138 334 179 8 70 402 135 418 1.90e-35 138
MS.gene051343.t1 MTR_1g044600 39.267 191 114 1 226 414 197 387 3.04e-35 136
MS.gene051343.t1 MTR_7g088980 35.366 246 115 2 139 384 269 470 1.57e-34 134
MS.gene051343.t1 MTR_7g088980 35.242 227 132 5 159 377 20 239 6.17e-32 127
MS.gene051343.t1 MTR_7g088980 35.366 246 115 2 139 384 295 496 1.90e-34 134
MS.gene051343.t1 MTR_7g088980 35.979 189 114 3 193 377 80 265 5.19e-27 113
MS.gene051343.t1 MTR_5g074850 35.223 247 143 6 161 397 503 742 2.73e-33 132
MS.gene051343.t1 MTR_4g074920 33.913 230 126 5 158 384 671 877 2.05e-32 130
MS.gene051343.t1 MTR_1g099480 41.212 165 91 3 157 318 469 630 6.15e-31 125
MS.gene051343.t1 MTR_8g056860 31.276 243 148 4 179 412 492 724 1.19e-30 125
MS.gene051343.t1 MTR_6g023865 32.400 250 150 7 150 384 152 397 1.20e-30 123
MS.gene051343.t1 MTR_8g099065 38.506 174 98 5 155 325 533 700 1.46e-30 124
MS.gene051343.t1 MTR_2g024440 31.897 232 136 7 157 377 215 435 3.90e-30 122
MS.gene051343.t1 MTR_2g024440 31.897 232 136 7 157 377 297 517 7.82e-30 122
MS.gene051343.t1 MTR_2g024440 31.897 232 136 7 157 377 298 518 8.09e-30 121
MS.gene051343.t1 MTR_1g080430 34.711 242 145 8 141 373 659 896 2.57e-28 118
MS.gene051343.t1 MTR_1g080430 34.711 242 145 8 141 373 659 896 3.36e-28 117
MS.gene051343.t1 MTR_4g112600 62.338 77 28 1 161 236 5 81 1.17e-26 102
MS.gene051343.t1 MTR_4g083460 37.158 183 91 5 156 319 837 1014 1.26e-21 98.2
MS.gene051343.t1 MTR_4g083460 28.509 228 131 6 185 394 580 793 5.82e-11 65.1
MS.gene051343.t1 MTR_8g076920 33.520 179 99 7 156 326 222 388 1.28e-14 75.9
MS.gene051343.t1 MTR_6g005760 35.099 151 89 5 194 343 236 378 1.34e-14 75.9
MS.gene051343.t1 MTR_6g005760 35.099 151 89 5 194 343 364 506 1.43e-14 75.9
MS.gene051343.t1 MTR_3g076930 30.000 170 101 4 196 351 199 364 1.70e-13 72.4
MS.gene051343.t1 MTR_5g020980 33.125 160 95 5 171 326 229 380 3.80e-13 71.2
MS.gene051343.t1 MTR_5g020530 35.417 144 84 5 194 336 389 524 3.82e-13 71.6
MS.gene051343.t1 MTR_2g076840 28.814 177 110 6 163 332 477 644 4.93e-13 71.2
MS.gene051343.t1 MTR_2g076840 28.022 182 115 5 157 332 196 367 2.33e-11 66.2
MS.gene051343.t1 MTR_4g077880 33.113 151 92 5 194 343 370 512 8.72e-13 70.5
MS.gene051343.t1 MTR_2g076690 29.609 179 105 7 163 332 210 376 1.41e-12 69.3
MS.gene051343.t1 MTR_2g076970 28.571 175 112 6 163 332 203 369 4.86e-12 67.8
MS.gene051343.t1 MTR_2g076710 32.468 154 90 5 183 332 236 379 4.98e-12 67.8
MS.gene051343.t1 MTR_3g115110 50.000 68 31 2 149 214 240 306 9.75e-12 67.0
MS.gene051343.t1 MTR_6g042290 29.016 193 113 7 163 341 215 397 3.09e-11 65.5
MS.gene051343.t1 MTR_2g076920 30.000 160 96 6 179 332 220 369 3.61e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051343.t1 AT5G19990 94.033 419 23 1 1 417 1 419 0.0 798
MS.gene051343.t1 AT5G19990 94.033 419 23 1 1 417 1 419 0.0 798
MS.gene051343.t1 AT5G20000 93.079 419 27 1 1 417 1 419 0.0 790
MS.gene051343.t1 AT5G19990 98.864 352 4 0 66 417 10 361 0.0 710
MS.gene051343.t1 AT1G53750 53.602 347 150 4 61 403 72 411 6.11e-120 355
MS.gene051343.t1 AT2G20140 47.090 378 195 2 30 407 63 435 2.36e-114 342
MS.gene051343.t1 AT4G29040 47.090 378 195 2 30 407 63 435 4.99e-114 341
MS.gene051343.t1 AT5G43010 49.441 358 166 2 58 401 24 380 7.63e-114 339
MS.gene051343.t1 AT1G53780 52.738 347 153 3 61 403 244 583 2.61e-113 344
MS.gene051343.t1 AT1G53780 52.738 347 153 3 61 403 244 583 2.61e-113 344
MS.gene051343.t1 AT1G53780 52.738 347 153 3 61 403 243 582 2.65e-113 344
MS.gene051343.t1 AT1G53780 52.738 347 153 3 61 403 265 604 6.23e-113 344
MS.gene051343.t1 AT1G45000 49.296 355 165 2 61 401 27 380 2.23e-112 335
MS.gene051343.t1 AT1G09100 52.740 292 137 1 113 404 124 414 2.70e-106 320
MS.gene051343.t1 AT3G05530 52.740 292 137 1 113 404 125 415 1.26e-105 319
MS.gene051343.t1 AT5G58290 44.444 378 196 3 31 407 39 403 7.17e-105 317
MS.gene051343.t1 AT1G45000 47.036 253 119 2 61 299 27 278 1.43e-71 228
MS.gene051343.t1 AT1G06430 42.683 246 139 2 157 402 218 461 9.86e-63 214
MS.gene051343.t1 AT1G06430 42.683 246 139 2 157 402 218 461 9.86e-63 214
MS.gene051343.t1 AT1G06430 42.683 246 139 2 157 402 218 461 9.86e-63 214
MS.gene051343.t1 AT2G30950 42.276 246 140 2 157 402 225 468 5.55e-62 213
MS.gene051343.t1 AT2G30950 42.276 246 140 2 157 402 225 468 5.55e-62 213
MS.gene051343.t1 AT2G30950 42.276 246 140 2 157 402 225 468 5.55e-62 213
MS.gene051343.t1 AT2G30950 42.276 246 140 2 157 402 229 472 7.09e-62 212
MS.gene051343.t1 AT3G09840 43.621 243 133 2 151 393 199 437 1.63e-61 213
MS.gene051343.t1 AT3G09840 42.128 235 136 0 150 384 471 705 1.36e-59 207
MS.gene051343.t1 AT5G03340 43.210 243 134 2 151 393 199 437 1.31e-60 210
MS.gene051343.t1 AT5G03340 42.128 235 135 1 150 384 471 704 1.40e-60 210
MS.gene051343.t1 AT3G53230 36.012 336 203 6 52 384 379 705 1.84e-60 210
MS.gene051343.t1 AT3G53230 41.870 246 139 2 151 396 200 441 3.20e-59 207
MS.gene051343.t1 AT5G42270 39.924 263 154 3 149 409 238 498 2.18e-60 208
MS.gene051343.t1 AT1G50250 39.544 263 155 3 149 409 250 510 2.20e-59 206
MS.gene051343.t1 AT5G15250 39.837 246 146 2 157 402 222 465 3.16e-57 199
MS.gene051343.t1 AT2G03670 41.463 246 144 0 139 384 266 511 1.49e-56 196
MS.gene051343.t1 AT2G03670 36.214 243 147 3 161 397 24 264 3.05e-44 162
MS.gene051343.t1 AT5G58870 40.541 259 151 2 157 413 327 584 2.32e-55 196
MS.gene051343.t1 AT4G23940 39.768 259 148 2 161 412 432 689 3.98e-55 196
MS.gene051343.t1 AT1G07510 40.467 257 150 2 161 415 329 584 4.43e-55 195
MS.gene051343.t1 AT5G15250 37.175 269 144 4 157 402 222 488 6.17e-55 190
MS.gene051343.t1 AT3G56690 41.870 246 141 1 139 384 704 947 6.38e-55 196
MS.gene051343.t1 AT3G56690 38.393 224 132 3 161 383 387 605 4.39e-42 159
MS.gene051343.t1 AT3G47060 39.382 259 154 2 157 413 323 580 2.65e-54 193
MS.gene051343.t1 AT2G29080 42.412 257 144 3 161 415 324 578 6.81e-52 186
MS.gene051343.t1 AT3G16290 38.800 250 147 3 150 397 401 646 3.29e-50 182
MS.gene051343.t1 AT1G05910 39.044 251 141 4 155 398 377 622 4.20e-50 182
MS.gene051343.t1 AT5G64580 40.329 243 137 4 157 393 314 554 8.12e-50 181
MS.gene051343.t1 AT2G26140 40.081 247 143 2 156 402 224 465 2.72e-49 178
MS.gene051343.t1 AT3G02450 40.079 252 144 3 152 401 327 573 4.93e-49 176
MS.gene051343.t1 AT5G53170 38.976 254 149 2 157 410 360 607 1.42e-48 177
MS.gene051343.t1 AT2G34560 37.594 266 153 6 154 411 98 358 2.35e-47 167
MS.gene051343.t1 AT2G34560 37.594 266 153 6 154 411 107 367 3.02e-47 166
MS.gene051343.t1 AT1G03000 39.749 239 137 6 152 387 651 885 4.12e-47 173
MS.gene051343.t1 AT1G80350 36.395 294 153 8 150 416 230 516 5.33e-47 169
MS.gene051343.t1 AT5G08470 41.176 238 129 4 158 393 834 1062 1.08e-45 169
MS.gene051343.t1 AT5G08470 41.176 238 129 4 158 393 843 1071 1.09e-45 169
MS.gene051343.t1 AT2G03670 36.585 246 142 4 161 397 24 264 2.03e-45 162
MS.gene051343.t1 AT2G03670 38.854 157 96 0 139 295 266 422 5.52e-29 117
MS.gene051343.t1 AT3G15120 39.224 232 129 4 158 382 718 944 2.19e-44 166
MS.gene051343.t1 AT3G15120 39.224 232 129 4 158 382 728 954 2.52e-44 166
MS.gene051343.t1 AT2G27600 39.837 246 135 8 139 380 112 348 3.56e-44 159
MS.gene051343.t1 AT2G45500 38.618 246 137 8 144 384 68 304 2.35e-43 155
MS.gene051343.t1 AT2G45500 38.618 246 137 8 144 384 68 304 2.35e-43 155
MS.gene051343.t1 AT3G01610 39.485 233 135 3 153 384 522 749 7.69e-43 160
MS.gene051343.t1 AT3G01610 35.223 247 144 3 148 383 222 463 6.38e-39 149
MS.gene051343.t1 AT3G01610 39.485 233 135 3 153 384 522 749 7.81e-43 160
MS.gene051343.t1 AT3G01610 35.223 247 144 3 148 383 222 463 6.94e-39 149
MS.gene051343.t1 AT2G45500 38.618 246 137 8 144 384 201 437 3.56e-42 155
MS.gene051343.t1 AT2G45500 38.189 254 143 8 136 384 197 441 4.37e-42 155
MS.gene051343.t1 AT2G45500 38.189 254 143 8 136 384 203 447 4.80e-42 155
MS.gene051343.t1 AT3G19740 39.827 231 129 5 158 384 703 927 1.47e-41 157
MS.gene051343.t1 AT4G02480 37.931 232 134 5 157 384 961 1186 4.77e-41 156
MS.gene051343.t1 AT1G50140 39.394 231 130 5 158 384 713 937 1.06e-40 155
MS.gene051343.t1 AT1G50140 39.394 231 130 5 158 384 713 937 1.06e-40 155
MS.gene051343.t1 AT1G50140 39.394 231 130 5 158 384 713 937 1.06e-40 155
MS.gene051343.t1 AT1G50140 39.394 231 130 5 158 384 691 915 1.14e-40 154
MS.gene051343.t1 AT1G50140 39.394 231 130 5 158 384 691 915 1.14e-40 154
MS.gene051343.t1 AT4G28000 37.229 231 135 6 157 384 518 741 5.62e-40 152
MS.gene051343.t1 AT4G28000 37.229 231 135 6 157 384 518 741 7.28e-40 152
MS.gene051343.t1 AT4G28000 37.229 231 135 6 157 384 516 739 7.67e-40 152
MS.gene051343.t1 AT5G53540 35.206 267 150 7 155 405 83 342 8.28e-40 147
MS.gene051343.t1 AT4G24860 36.910 233 139 4 155 384 816 1043 1.18e-39 152
MS.gene051343.t1 AT4G24860 36.910 233 139 4 155 384 814 1041 1.26e-39 152
MS.gene051343.t1 AT4G24860 36.910 233 139 4 155 384 789 1016 1.72e-39 151
MS.gene051343.t1 AT4G24860 36.910 233 139 4 155 384 812 1039 1.74e-39 151
MS.gene051343.t1 AT1G02890 37.500 232 135 5 157 384 942 1167 2.05e-39 151
MS.gene051343.t1 AT1G64110 36.797 231 137 5 157 384 514 738 8.54e-39 149
MS.gene051343.t1 AT1G64110 36.797 231 137 5 157 384 517 741 8.76e-39 149
MS.gene051343.t1 AT1G64110 36.797 231 137 5 157 384 517 741 8.76e-39 149
MS.gene051343.t1 AT1G64110 36.797 231 137 5 157 384 519 743 9.05e-39 149
MS.gene051343.t1 AT1G64110 36.797 231 137 5 157 384 519 743 9.05e-39 149
MS.gene051343.t1 AT4G27680 36.752 234 137 5 155 384 80 306 1.38e-38 144
MS.gene051343.t1 AT4G04910 35.556 270 141 7 161 401 217 482 1.93e-37 144
MS.gene051343.t1 AT5G52882 36.364 231 137 6 157 384 515 738 2.73e-37 144
MS.gene051343.t1 AT3G27120 32.168 286 167 9 150 416 394 671 1.53e-36 142
MS.gene051343.t1 AT1G79560 34.234 222 131 3 181 393 514 729 4.99e-33 132
MS.gene051343.t1 AT1G79560 34.234 222 131 3 181 393 514 729 5.37e-33 132
MS.gene051343.t1 AT1G79560 34.234 222 131 3 181 393 514 729 6.09e-33 132
MS.gene051343.t1 AT1G62130 33.195 241 135 7 157 393 744 962 5.34e-30 123
MS.gene051343.t1 AT1G62130 33.195 241 135 7 157 393 751 969 6.21e-30 123
MS.gene051343.t1 AT4G04180 33.761 234 129 7 157 377 312 532 9.85e-30 121
MS.gene051343.t1 AT4G04180 33.761 234 129 7 157 377 317 537 1.03e-29 121
MS.gene051343.t1 AT3G04340 32.103 271 161 9 120 373 736 1000 1.19e-25 110
MS.gene051343.t1 AT5G08470 40.268 149 85 1 158 306 843 987 3.04e-25 108
MS.gene051343.t1 AT1G02890 31.466 232 121 6 157 384 942 1139 6.88e-24 105
MS.gene051343.t1 AT5G17760 32.022 178 106 6 156 326 216 385 1.89e-14 75.5
MS.gene051343.t1 AT4G24710 29.375 160 97 3 196 341 217 374 4.77e-14 74.3
MS.gene051343.t1 AT4G24710 29.375 160 97 3 196 341 205 362 4.79e-14 73.9
MS.gene051343.t1 AT2G18193 30.857 175 109 4 156 326 206 372 1.57e-13 72.8
MS.gene051343.t1 AT4G24710 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
MS.gene051343.t1 AT4G24710 30.159 126 74 2 196 307 217 342 1.05e-12 69.3
MS.gene051343.t1 AT5G16930 32.450 151 93 5 194 343 399 541 1.14e-12 70.1
MS.gene051343.t1 AT2G18330 34.028 144 86 5 194 336 386 521 1.37e-12 70.1
MS.gene051343.t1 AT4G36580 33.333 144 87 5 194 336 383 518 2.90e-12 68.9
MS.gene051343.t1 AT3G03060 32.450 151 93 5 194 343 387 529 4.08e-12 68.6
MS.gene051343.t1 AT5G17740 29.282 181 110 6 156 326 208 380 9.89e-12 67.0
MS.gene051343.t1 AT3G50930 31.319 182 105 8 156 326 262 434 1.49e-11 66.6
MS.gene051343.t1 AT3G50940 30.178 169 105 5 163 326 216 376 2.04e-11 65.9
MS.gene051343.t1 AT4G05380 32.075 159 84 7 183 326 233 382 2.89e-11 65.5

Find 100 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAGGGTGTCTTGCTCTA+TGG 0.234044 4.1:+19493271 MS.gene051343:intron
AAAAGCTCAGGATGTTTAAT+TGG 0.236938 4.1:-19493130 None:intergenic
CAAACCTCTTCATTAGGATT+TGG 0.256280 4.1:-19494295 None:intergenic
CTCCCCTTGTTTGGTTGGTT+TGG 0.269659 4.1:-19490835 None:intergenic
GGAAGAACTGCAGCTTCTTC+AGG 0.294426 4.1:+19492039 MS.gene051343:CDS
TCAACAACATATTTCCCTTC+TGG 0.316681 4.1:-19492794 None:intergenic
CGCTCCATCAATTATCTTCA+TGG 0.333056 4.1:+19493846 MS.gene051343:CDS
TTAAATTCATTCTTCTTGAA+TGG 0.356511 4.1:-19494451 None:intergenic
ACGGAGACCCTCCCCTTGTT+TGG 0.367288 4.1:-19490844 None:intergenic
AAGATGCAAACCTCTTCATT+AGG 0.374465 4.1:-19494301 None:intergenic
GAGAAGGTTCTAGAATGGTT+AGG 0.383338 4.1:+19493398 MS.gene051343:CDS
TGTACATTCATCAGGGTGTC+TGG 0.388654 4.1:+19493349 MS.gene051343:CDS
CACAGGGTGTCTTGCTCTAT+GGG 0.390742 4.1:+19493272 MS.gene051343:intron
TCGTCCATGAAGATAATTGA+TGG 0.392466 4.1:-19493850 None:intergenic
ATACTGATTGTACATTCATC+AGG 0.399410 4.1:+19493341 MS.gene051343:CDS
TTTGGACAGTGAGGATGCTT+CGG 0.403502 4.1:+19492017 MS.gene051343:intron
GGATCTGCTCGTATGGAATC+TGG 0.411007 4.1:+19493886 MS.gene051343:CDS
AACGTAACGAGCTCAATTCT+AGG 0.412070 4.1:+19490946 MS.gene051343:CDS
AGCATCTGGTGCTGAGCTTA+AGG 0.412390 4.1:+19494517 MS.gene051343:CDS
ACCAATGGATCAACTTTGCT+TGG 0.422834 4.1:-19492905 None:intergenic
CACCAATCGGATTGATATCC+TGG 0.427746 4.1:+19494225 MS.gene051343:CDS
TGTCAATCCGTCCAGGTCTC+AGG 0.427849 4.1:-19494258 None:intergenic
ATGGACGAAATTGACAGTAT+TGG 0.429793 4.1:+19493865 MS.gene051343:CDS
TTGGACAGTGAGGATGCTTC+GGG 0.433244 4.1:+19492018 MS.gene051343:intron
GTCTTGCTCTATGGGCCACC+TGG 0.438579 4.1:+19493280 MS.gene051343:CDS
CTCTATGGGCCACCTGGTAC+AGG 0.438619 4.1:+19493286 MS.gene051343:CDS
ATCATGTCATATGTAGAATC+AGG 0.441088 4.1:-19492953 None:intergenic
TCCAAGCAAAGTTGATCCAT+TGG 0.453561 4.1:+19492904 MS.gene051343:CDS
TAGGCTGTGTGCACTGAAGC+TGG 0.461439 4.1:+19495365 MS.gene051343:intron
TGAGACCTGGACGGATTGAC+AGG 0.462916 4.1:+19494260 MS.gene051343:CDS
TTGGCAGAGCAATGCTCCTC+CGG 0.467372 4.1:-19490816 None:intergenic
AGAAGGTTCTAGAATGGTTA+GGG 0.470154 4.1:+19493399 MS.gene051343:CDS
CAGTATTGGATCTGCTCGTA+TGG 0.473028 4.1:+19493879 MS.gene051343:CDS
ACTGCAGCTTCTTCAGGAGC+CGG 0.474454 4.1:+19492045 MS.gene051343:CDS
AGACCCTCCCCTTGTTTGGT+TGG 0.479760 4.1:-19490840 None:intergenic
GTCTCAGGAGTGCTTGATCC+AGG 0.483737 4.1:-19494243 None:intergenic
TGAAGCTTCCAATAAGATCA+AGG 0.484032 4.1:+19493975 MS.gene051343:CDS
CAGGAGCCGGGTTCATATGT+TGG 0.485016 4.1:+19492058 MS.gene051343:CDS
AACATTGTTGGCTAGGGCAG+TGG 0.488091 4.1:+19493312 MS.gene051343:CDS
AAGCTTCAAATCCATCCAAC+TGG 0.490388 4.1:-19493960 None:intergenic
TGAAGTGCAGCGTACTATGC+TGG 0.493786 4.1:+19493927 MS.gene051343:CDS
GAGAAGATGAATGGAGCATC+TGG 0.497037 4.1:+19494503 MS.gene051343:CDS
GAACTTGTTCAGAAATACAT+TGG 0.500672 4.1:+19493376 MS.gene051343:CDS
CGAAGAGCAACTCTAGTAGA+TGG 0.500788 4.1:-19492851 None:intergenic
GAACTTCTCAACCAGTTGGA+TGG 0.502365 4.1:+19493949 MS.gene051343:CDS
ACGTAACGAGCTCAATTCTA+GGG 0.502522 4.1:+19490947 MS.gene051343:CDS
GAAGCATGCCGAGGGTGCAC+CGG 0.505872 4.1:+19490797 MS.gene051343:CDS
AAGATTGCTGAGAAGATGAA+TGG 0.505915 4.1:+19494494 MS.gene051343:CDS
CTGCAGCTTCTTCAGGAGCC+GGG 0.508110 4.1:+19492046 MS.gene051343:CDS
ATCTTCCTGTCAATCCGTCC+AGG 0.508744 4.1:-19494265 None:intergenic
ATGCTCCTCCGGTGCACCCT+CGG 0.511471 4.1:-19490805 None:intergenic
CATTGGAGAAGGTTCTAGAA+TGG 0.526027 4.1:+19493393 MS.gene051343:CDS
ACATGTCATTGAGGAAGTTG+TGG 0.527779 4.1:+19495480 MS.gene051343:CDS
GTTCAGAAATACATTGGAGA+AGG 0.530083 4.1:+19493382 MS.gene051343:CDS
GGTCTCCTTCTTCATCACCT+TGG 0.536682 4.1:-19495450 None:intergenic
GATTCTACATATGACATGAT+TGG 0.538886 4.1:+19492956 MS.gene051343:CDS
CAGGATATCAATCCGATTGG+TGG 0.543342 4.1:-19494224 None:intergenic
TTTCTTCAGGTCCATCCAGA+AGG 0.548623 4.1:+19492779 MS.gene051343:intron
GGCGAAGTCGTTAAAGTGAT+GGG 0.549245 4.1:+19492079 MS.gene051343:CDS
GCATGCCGAGGGTGCACCGG+AGG 0.551420 4.1:+19490800 MS.gene051343:CDS
GCTCGTATGGAATCTGGAAG+TGG 0.557452 4.1:+19493892 MS.gene051343:CDS
TGGCGAAGTCGTTAAAGTGA+TGG 0.558114 4.1:+19492078 MS.gene051343:CDS
ATTTCCAAATCCTAATGAAG+AGG 0.559940 4.1:+19494291 MS.gene051343:CDS
TCTGCCAAACCAACCAAACA+AGG 0.562521 4.1:+19490831 MS.gene051343:CDS
GAATGTTTGCTCTGAGAGAG+AGG 0.563359 4.1:+19495387 MS.gene051343:CDS
CAACATATTTCCCTTCTGGA+TGG 0.563974 4.1:-19492790 None:intergenic
CGTGGCCAAGGTGATGAAGA+AGG 0.564116 4.1:+19495445 MS.gene051343:CDS
ACAAATCAAAGAAATAAAAG+AGG 0.566379 4.1:+19492991 MS.gene051343:CDS
ATCCAGGATATCAATCCGAT+TGG 0.573250 4.1:-19494227 None:intergenic
GATCAAGCACTCCTGAGACC+TGG 0.576588 4.1:+19494247 MS.gene051343:CDS
TTCTTCAGGTCCATCCAGAA+GGG 0.577294 4.1:+19492780 MS.gene051343:intron
GATGGGCAAGAACAAAGTCT+TGG 0.577623 4.1:+19492096 MS.gene051343:CDS
GAGGAGGGTACACGTGACAC+AGG 0.581105 4.1:+19495406 MS.gene051343:CDS
GCTGGAACTTCTCAACCAGT+TGG 0.589168 4.1:+19493945 MS.gene051343:CDS
CGTTACGTTGCGCCTCGAGA+CGG 0.590961 4.1:-19490932 None:intergenic
CTTCTTCATCACCTTGGCCA+CGG 0.598381 4.1:-19495444 None:intergenic
ATGGAATCTGGAAGTGGCAA+TGG 0.600506 4.1:+19493898 MS.gene051343:CDS
GGTGAAGGAGCTGAAGCTCA+TGG 0.606891 4.1:-19490887 None:intergenic
TGTGCTGAGTATAGTATTGA+CGG 0.610288 4.1:-19490863 None:intergenic
TCTACATATGACATGATTGG+TGG 0.611571 4.1:+19492959 MS.gene051343:CDS
ACTTTCATCAGATTAACCAA+TGG 0.612930 4.1:-19492920 None:intergenic
CAAACCAACCAAACAAGGGG+AGG 0.622103 4.1:+19490836 MS.gene051343:CDS
GTTTGCTCTGAGAGAGAGGA+GGG 0.624635 4.1:+19495391 MS.gene051343:CDS
ATCTGATCTATGGCTGCCGT+CGG 0.626800 4.1:+19490765 None:intergenic
TACTGATTGTACATTCATCA+GGG 0.626895 4.1:+19493342 MS.gene051343:CDS
CAAGAACAAAGTCTTGGTCA+AGG 0.631707 4.1:+19492102 MS.gene051343:CDS
CTGCCAAACCAACCAAACAA+GGG 0.631755 4.1:+19490832 MS.gene051343:CDS
TGCCAAACCAACCAAACAAG+GGG 0.631947 4.1:+19490833 MS.gene051343:CDS
AGAAGAATGAATTTAATGCG+TGG 0.632686 4.1:+19494458 MS.gene051343:CDS
GTAGAAGTGAAGCATGCCGA+GGG 0.639336 4.1:+19490789 MS.gene051343:CDS
TCTTGGAATAGCTCAACCAA+AGG 0.648483 4.1:+19493159 MS.gene051343:CDS
AGTAGAAGTGAAGCATGCCG+AGG 0.652737 4.1:+19490788 MS.gene051343:CDS
AAGCACTCCTGAGACCTGGA+CGG 0.655986 4.1:+19494251 MS.gene051343:CDS
AAACCAACCAAACAAGGGGA+GGG 0.659041 4.1:+19490837 MS.gene051343:CDS
TGTTTGCTCTGAGAGAGAGG+AGG 0.667718 4.1:+19495390 MS.gene051343:CDS
ATGCTTCACTTCTACTCCGA+CGG 0.669417 4.1:-19490781 None:intergenic
TCATAATCTTAACCGTCTCG+AGG 0.679147 4.1:+19490920 MS.gene051343:CDS
ACTTCGCCAACATATGAACC+CGG 0.687598 4.1:-19492064 None:intergenic
GAGGGTACACGTGACACAGG+AGG 0.687991 4.1:+19495409 MS.gene051343:CDS
CGTAACGAGCTCAATTCTAG+GGG 0.691922 4.1:+19490948 MS.gene051343:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAATAAAAAATGATTAG+AGG + chr4.1:19491217-19491236 MS.gene051343:intron 15.0%
!! AAATAAAACTCAAATACATT+AGG - chr4.1:19491479-19491498 None:intergenic 15.0%
!! AATAGTATGAAATATAAAAC+TGG + chr4.1:19494884-19494903 MS.gene051343:intron 15.0%
!! ATAGTATGAAATATAAAACT+GGG + chr4.1:19494885-19494904 MS.gene051343:intron 15.0%
!! CAATATTAAAGTGATTTATA+AGG - chr4.1:19492626-19492645 None:intergenic 15.0%
!! GAATATTATATGAAAATGAA+AGG - chr4.1:19494709-19494728 None:intergenic 15.0%
!! TAAAATGTATAATTGTAATG+TGG + chr4.1:19493636-19493655 MS.gene051343:intron 15.0%
!! TTATCCAATAAATAATATCT+AGG + chr4.1:19491647-19491666 MS.gene051343:intron 15.0%
!!! AAATACAGAAAAGTTATTTT+TGG - chr4.1:19491978-19491997 None:intergenic 15.0%
!!! AATACAGAAAAGTTATTTTT+GGG - chr4.1:19491977-19491996 None:intergenic 15.0%
!!! AATGTATTTGAGTTTTATTT+TGG + chr4.1:19491479-19491498 MS.gene051343:intron 15.0%
!!! TTTTTTTTTTAATGATGCTA+TGG + chr4.1:19494008-19494027 MS.gene051343:intron 15.0%
!! AAAAATTACCTTGATCTTAT+TGG - chr4.1:19493986-19494005 None:intergenic 20.0%
!! AAATGATAGTAAATTAGTGA+AGG - chr4.1:19491876-19491895 None:intergenic 20.0%
!! AAGAATAAAAAAGAGGAATA+GGG - chr4.1:19490988-19491007 None:intergenic 20.0%
!! AAGATATGAATTTGAAAACT+GGG - chr4.1:19491695-19491714 None:intergenic 20.0%
!! ACAAATCAAAGAAATAAAAG+AGG + chr4.1:19492991-19493010 MS.gene051343:CDS 20.0%
!! AGTATTTAGACTAATCAATA+CGG - chr4.1:19492466-19492485 None:intergenic 20.0%
!! GAATTTAGATTAAACAATAC+AGG - chr4.1:19492501-19492520 None:intergenic 20.0%
!! GTAAATATAAAACTGTAAGA+GGG + chr4.1:19494106-19494125 MS.gene051343:intron 20.0%
!! TATAAGGATAAAAATTCCAT+AGG - chr4.1:19492610-19492629 None:intergenic 20.0%
!! TCAATTCAATAGATAATAAG+AGG + chr4.1:19491068-19491087 MS.gene051343:intron 20.0%
!! TGTAAATATAAAACTGTAAG+AGG + chr4.1:19494105-19494124 MS.gene051343:intron 20.0%
!! TTAAATTCATTCTTCTTGAA+TGG - chr4.1:19494454-19494473 None:intergenic 20.0%
!! TTATTATTAATTTCATGCAC+AGG - chr4.1:19492719-19492738 None:intergenic 20.0%
!!! ATACAGAAAAGTTATTTTTG+GGG - chr4.1:19491976-19491995 None:intergenic 20.0%
!!! ATATAGTTGTTTTCAGTAAA+TGG - chr4.1:19494398-19494417 None:intergenic 20.0%
!!! ATCATCTAAAATATTGTCAT+CGG + chr4.1:19494590-19494609 MS.gene051343:intron 20.0%
!!! CTTTTATTTCTTTGATTTGT+TGG - chr4.1:19492991-19493010 None:intergenic 20.0%
!!! TAAGATTATGATTCTTTTGA+CGG - chr4.1:19490911-19490930 None:intergenic 20.0%
!!! TCATTTACATCAAATTTTAC+AGG + chr4.1:19493096-19493115 MS.gene051343:intron 20.0%
!!! TTTTATTGTTTTAGACAACT+GGG - chr4.1:19491208-19491227 None:intergenic 20.0%
!!! TTTTTATTGTTTTAGACAAC+TGG - chr4.1:19491209-19491228 None:intergenic 20.0%
! AAAATGATTAGAGGACATAA+TGG + chr4.1:19491226-19491245 MS.gene051343:intron 25.0%
! ATATATAACAGTACAGATAG+CGG - chr4.1:19492198-19492217 None:intergenic 25.0%
! ATTATGCTGTAATGTCATAA+TGG + chr4.1:19495206-19495225 MS.gene051343:intron 25.0%
! CAAGAATAAAAAAGAGGAAT+AGG - chr4.1:19490989-19491008 None:intergenic 25.0%
! CAATAACAACATGTTAATGT+TGG - chr4.1:19494812-19494831 None:intergenic 25.0%
! CAATAGATAATAAGAGGATA+TGG + chr4.1:19491074-19491093 MS.gene051343:intron 25.0%
! CACACCTAGATATTATTTAT+TGG - chr4.1:19491654-19491673 None:intergenic 25.0%
! CATAATTCTATCTGAATAGT+AGG - chr4.1:19495192-19495211 None:intergenic 25.0%
! GAAGAGAAAATTGCAATTAT+AGG + chr4.1:19494192-19494211 MS.gene051343:intron 25.0%
! GAAGATATGAATTTGAAAAC+TGG - chr4.1:19491696-19491715 None:intergenic 25.0%
! GCAATTCAAGAATAAAAAAG+AGG - chr4.1:19490995-19491014 None:intergenic 25.0%
! GTATTTAGACTAATCAATAC+GGG - chr4.1:19492465-19492484 None:intergenic 25.0%
! TATATGTATATGTATGCTGA+AGG - chr4.1:19494375-19494394 None:intergenic 25.0%
! TATTTAGACTAATCAATACG+GGG - chr4.1:19492464-19492483 None:intergenic 25.0%
! TCTATCACATCAAACTTATT+AGG + chr4.1:19491714-19491733 MS.gene051343:intron 25.0%
! TTGATACATCATATTCTTGA+AGG - chr4.1:19491906-19491925 None:intergenic 25.0%
!! AATTTTACAATGCGAAACAA+AGG + chr4.1:19494774-19494793 MS.gene051343:intron 25.0%
!! ACTCTATTTTATGTATCACA+GGG + chr4.1:19493256-19493275 MS.gene051343:intron 25.0%
!! ATAAACGGATTCAAAATTTG+AGG - chr4.1:19491114-19491133 None:intergenic 25.0%
!! CTCTTTTCATTATTCATTGT+TGG + chr4.1:19492422-19492441 MS.gene051343:intron 25.0%
!! TACTCTATTTTATGTATCAC+AGG + chr4.1:19493255-19493274 MS.gene051343:intron 25.0%
!! TTAACACATTATTTCAAGTG+TGG + chr4.1:19495306-19495325 MS.gene051343:intron 25.0%
!!! AAACTTTGGTTTGTTTATGT+GGG + chr4.1:19491360-19491379 MS.gene051343:intron 25.0%
!!! AATGGATTTTCAAGATATCT+CGG - chr4.1:19494436-19494455 None:intergenic 25.0%
!!! ATTGCAATTATAGGTTTTGA+TGG + chr4.1:19494201-19494220 MS.gene051343:intron 25.0%
!!! ATTTTCTTTTGCTGTAAGAT+CGG + chr4.1:19491755-19491774 MS.gene051343:intron 25.0%
!!! TCTGTGCTTTTATTTTATGT+AGG + chr4.1:19495346-19495365 MS.gene051343:intron 25.0%
!!! TTGTGAGACATTGTTTTTTT+AGG - chr4.1:19493730-19493749 None:intergenic 25.0%
AAAAACAAATTGAGCCATCA+TGG - chr4.1:19492169-19492188 None:intergenic 30.0%
AAAACTGGGTGTAATAGTAA+CGG + chr4.1:19494899-19494918 MS.gene051343:intron 30.0%
AAAAGCTCAGGATGTTTAAT+TGG - chr4.1:19493133-19493152 None:intergenic 30.0%
AAACAAACATAAGCTTATCC+TGG - chr4.1:19491445-19491464 None:intergenic 30.0%
AAATAGTACAGAATCTTGGT+TGG + chr4.1:19492584-19492603 MS.gene051343:intron 30.0%
AACTCATGCAATATTACCTT+TGG - chr4.1:19493178-19493197 None:intergenic 30.0%
AATAGTAGGAATTGTGAAAG+GGG - chr4.1:19495178-19495197 None:intergenic 30.0%
AATATGGAATTCAACAAGGT+TGG + chr4.1:19491273-19491292 MS.gene051343:intron 30.0%
ACATTTACTTCAAATGAGCA+TGG - chr4.1:19493770-19493789 None:intergenic 30.0%
ACTTCAAAAACTCAGTTACT+AGG - chr4.1:19493599-19493618 None:intergenic 30.0%
ACTTTCATCAGATTAACCAA+TGG - chr4.1:19492923-19492942 None:intergenic 30.0%
AGAAGAATGAATTTAATGCG+TGG + chr4.1:19494458-19494477 MS.gene051343:CDS 30.0%
AGGAGTAGTGTTACATATAT+TGG - chr4.1:19493812-19493831 None:intergenic 30.0%
AGTGTATTATGCAACAATAG+TGG - chr4.1:19492308-19492327 None:intergenic 30.0%
ATAATGAATGGAGTAGGTTT+AGG - chr4.1:19493457-19493476 None:intergenic 30.0%
ATATGAATTTGAAAACTGGG+AGG - chr4.1:19491692-19491711 None:intergenic 30.0%
ATCATGTCATATGTAGAATC+AGG - chr4.1:19492956-19492975 None:intergenic 30.0%
ATTAGAGGGAATTCCAAAAT+TGG + chr4.1:19494061-19494080 MS.gene051343:intron 30.0%
ATTTCCAAATCCTAATGAAG+AGG + chr4.1:19494291-19494310 MS.gene051343:CDS 30.0%
CACTTATTGAGATAAACAAC+GGG + chr4.1:19494681-19494700 MS.gene051343:intron 30.0%
CAGTTATAAACACTTCATAG+TGG + chr4.1:19495029-19495048 MS.gene051343:intron 30.0%
CCTAAAATAGTACAGAATCT+TGG + chr4.1:19492580-19492599 MS.gene051343:intron 30.0%
CTATATATACACACAAAACC+AGG + chr4.1:19491424-19491443 MS.gene051343:intron 30.0%
CTTCAAAAACTCAGTTACTA+GGG - chr4.1:19493598-19493617 None:intergenic 30.0%
GAACAAAAAATCCTAGACAA+AGG + chr4.1:19492739-19492758 MS.gene051343:intron 30.0%
GAACTCATGACTATATCTAA+TGG + chr4.1:19492680-19492699 MS.gene051343:intron 30.0%
GAATAGTAGGAATTGTGAAA+GGG - chr4.1:19495179-19495198 None:intergenic 30.0%
GATTCTACATATGACATGAT+TGG + chr4.1:19492956-19492975 MS.gene051343:CDS 30.0%
GCACTTATTGAGATAAACAA+CGG + chr4.1:19494680-19494699 MS.gene051343:intron 30.0%
GTTATACGTTCACAATTTAG+AGG + chr4.1:19494162-19494181 MS.gene051343:intron 30.0%
TAATAGTTGATTGGATTGCT+GGG + chr4.1:19494945-19494964 MS.gene051343:intron 30.0%
TCACATCAAACTTATTAGGA+AGG + chr4.1:19491718-19491737 MS.gene051343:intron 30.0%
TCCAAATTGCAATTGAATCA+GGG - chr4.1:19492003-19492022 None:intergenic 30.0%
TGAATAGTAGGAATTGTGAA+AGG - chr4.1:19495180-19495199 None:intergenic 30.0%
TTATTAATTTCATGCACAGG+TGG - chr4.1:19492716-19492735 None:intergenic 30.0%
! ACCTTTGAAAAGACAACAAT+GGG + chr4.1:19493696-19493715 MS.gene051343:intron 30.0%
! ATACTGATTGTACATTCATC+AGG + chr4.1:19493341-19493360 MS.gene051343:CDS 30.0%
! ATGCAATCACTTTGTTTGAT+GGG + chr4.1:19494734-19494753 MS.gene051343:intron 30.0%
! CCAAGATTCTGTACTATTTT+AGG - chr4.1:19492583-19492602 None:intergenic 30.0%
! GAACTTGTTCAGAAATACAT+TGG + chr4.1:19493376-19493395 MS.gene051343:CDS 30.0%
! GTTGTCTAAGATATTATCTC+AGG + chr4.1:19494831-19494850 MS.gene051343:intron 30.0%
! TACTGATTGTACATTCATCA+GGG + chr4.1:19493342-19493361 MS.gene051343:CDS 30.0%
! TATGCAATCACTTTGTTTGA+TGG + chr4.1:19494733-19494752 MS.gene051343:intron 30.0%
! TCTTTTCAAAGGTCAGTTAA+TGG - chr4.1:19493689-19493708 None:intergenic 30.0%
! TTTGAAGTAAATGTGTTCTG+AGG + chr4.1:19493776-19493795 MS.gene051343:intron 30.0%
!! AGTTTCCATTACTTTTCTTC+AGG + chr4.1:19492766-19492785 MS.gene051343:intron 30.0%
!! CAAACTTTGGTTTGTTTATG+TGG + chr4.1:19491359-19491378 MS.gene051343:intron 30.0%
!! TAGCATCGACATAAATAAGA+GGG + chr4.1:19493480-19493499 MS.gene051343:intron 30.0%
AAACTGGGTGTAATAGTAAC+GGG + chr4.1:19494900-19494919 MS.gene051343:intron 35.0%
AAGATGCAAACCTCTTCATT+AGG - chr4.1:19494304-19494323 None:intergenic 35.0%
AAGATTGCTGAGAAGATGAA+TGG + chr4.1:19494494-19494513 MS.gene051343:CDS 35.0%
AAGTCTTCACTTCGCATTTA+AGG - chr4.1:19492556-19492575 None:intergenic 35.0%
ACTTTACCACTATAGTGTAG+CGG + chr4.1:19492270-19492289 MS.gene051343:intron 35.0%
AGATATTATCTCAGGTCATG+AGG + chr4.1:19494839-19494858 MS.gene051343:intron 35.0%
ATAAACACTTCATAGTGGTG+AGG + chr4.1:19495034-19495053 MS.gene051343:intron 35.0%
ATGGACCTGAAGAAAAGTAA+TGG - chr4.1:19492774-19492793 None:intergenic 35.0%
ATGGACGAAATTGACAGTAT+TGG + chr4.1:19493865-19493884 MS.gene051343:CDS 35.0%
ATGGTCGAAGATATATCTGA+TGG + chr4.1:19493538-19493557 MS.gene051343:intron 35.0%
CAAACCTCTTCATTAGGATT+TGG - chr4.1:19494298-19494317 None:intergenic 35.0%
CACAGAAAATTGAGCATACT+AGG - chr4.1:19495332-19495351 None:intergenic 35.0%
CACTACTAATTGCTTCAACA+AGG - chr4.1:19494616-19494635 None:intergenic 35.0%
CGGTAATATGGAATTCAACA+AGG + chr4.1:19491269-19491288 MS.gene051343:intron 35.0%
CTAATAGTTGATTGGATTGC+TGG + chr4.1:19494944-19494963 MS.gene051343:intron 35.0%
CTACACATAATGAATGGAGT+AGG - chr4.1:19493463-19493482 None:intergenic 35.0%
CTCAATTTCTCCAACAAGAT+TGG - chr4.1:19491313-19491332 None:intergenic 35.0%
CTTGTTGAAGCAATTAGTAG+TGG + chr4.1:19494614-19494633 MS.gene051343:intron 35.0%
GACAAATATTGTCCTTTGAG+CGG + chr4.1:19491517-19491536 MS.gene051343:intron 35.0%
GCTATGAATTTACGTGTTCA+TGG + chr4.1:19495241-19495260 MS.gene051343:intron 35.0%
GTCCAAATTGCAATTGAATC+AGG - chr4.1:19492004-19492023 None:intergenic 35.0%
GTGGAAAAGCTGAATTCATT+TGG + chr4.1:19494633-19494652 MS.gene051343:intron 35.0%
GTTCAGAAATACATTGGAGA+AGG + chr4.1:19493382-19493401 MS.gene051343:CDS 35.0%
TAAACACTTCATAGTGGTGA+GGG + chr4.1:19495035-19495054 MS.gene051343:intron 35.0%
TCAACAACATATTTCCCTTC+TGG - chr4.1:19492797-19492816 None:intergenic 35.0%
TCATGACTATATCTAATGGC+AGG + chr4.1:19492684-19492703 MS.gene051343:intron 35.0%
TCCCTGATTCAATTGCAATT+TGG + chr4.1:19491999-19492018 MS.gene051343:intron 35.0%
TCGATGCTACACATAATGAA+TGG - chr4.1:19493469-19493488 None:intergenic 35.0%
TCGTCCATGAAGATAATTGA+TGG - chr4.1:19493853-19493872 None:intergenic 35.0%
TCTACATATGACATGATTGG+TGG + chr4.1:19492959-19492978 MS.gene051343:CDS 35.0%
TGAAGCTTCCAATAAGATCA+AGG + chr4.1:19493975-19493994 MS.gene051343:CDS 35.0%
TGGTACAGGAAAAACATTGT+TGG + chr4.1:19493300-19493319 MS.gene051343:CDS 35.0%
TGGTCGAAGATATATCTGAT+GGG + chr4.1:19493539-19493558 MS.gene051343:intron 35.0%
TGTTAAATAGCCAGCTATAG+TGG + chr4.1:19492246-19492265 MS.gene051343:intron 35.0%
TTAGATGATAATAGAGCAGC+AGG - chr4.1:19494579-19494598 None:intergenic 35.0%
! AACAATGTTTTTCCTGTACC+AGG - chr4.1:19493301-19493320 None:intergenic 35.0%
! AACACACATGTTGCCAATTT+TGG - chr4.1:19494077-19494096 None:intergenic 35.0%
! AGGAAAAACATTGTTGGCTA+GGG + chr4.1:19493306-19493325 MS.gene051343:CDS 35.0%
! ATGCTATGGTAGTGTATTAG+AGG + chr4.1:19494022-19494041 MS.gene051343:intron 35.0%
! CAAAGTTTGGGTTTATTCCA+TGG + chr4.1:19495093-19495112 MS.gene051343:intron 35.0%
! CCTCAATGACATGTTTTTCT+CGG - chr4.1:19495474-19495493 None:intergenic 35.0%
! GACCTTTGAAAAGACAACAA+TGG + chr4.1:19493695-19493714 MS.gene051343:intron 35.0%
! GGTTAGGGAACTTTTTGTTA+TGG + chr4.1:19493414-19493433 MS.gene051343:CDS 35.0%
! GTGGGTTACTAATAGTTGAT+TGG + chr4.1:19494936-19494955 MS.gene051343:intron 35.0%
! TAACACTACTCCTTTTCACA+GGG + chr4.1:19493819-19493838 MS.gene051343:intron 35.0%
! TATGATTCTTTTGACGGTGA+AGG - chr4.1:19490905-19490924 None:intergenic 35.0%
! TGCAATCACTTTGTTTGATG+GGG + chr4.1:19494735-19494754 MS.gene051343:intron 35.0%
! TGCTATGGTAGTGTATTAGA+GGG + chr4.1:19494023-19494042 MS.gene051343:intron 35.0%
! TGTGCTGAGTATAGTATTGA+CGG - chr4.1:19490866-19490885 None:intergenic 35.0%
!! AGAAGGTTCTAGAATGGTTA+GGG + chr4.1:19493399-19493418 MS.gene051343:CDS 35.0%
!! GTAGCATCGACATAAATAAG+AGG + chr4.1:19493479-19493498 MS.gene051343:intron 35.0%
!! GTTGATTTGTATCACCCTTT+GGG + chr4.1:19491146-19491165 MS.gene051343:intron 35.0%
!! TGGTTTGTTTATGTGGGTTT+GGG + chr4.1:19491366-19491385 MS.gene051343:intron 35.0%
!! TTGATTTGTATCACCCTTTG+GGG + chr4.1:19491147-19491166 MS.gene051343:intron 35.0%
!! TTGGTTTGTTTATGTGGGTT+TGG + chr4.1:19491365-19491384 MS.gene051343:intron 35.0%
AAATATTGTCCTTTGAGCGG+TGG + chr4.1:19491520-19491539 MS.gene051343:intron 40.0%
AACAAATTGAGCCATCATGG+TGG - chr4.1:19492166-19492185 None:intergenic 40.0%
AACCCAGAGGGGTAAATAAA+CGG - chr4.1:19491129-19491148 None:intergenic 40.0%
AACGTAACGAGCTCAATTCT+AGG + chr4.1:19490946-19490965 MS.gene051343:CDS 40.0%
AACTGGGTGTAATAGTAACG+GGG + chr4.1:19494901-19494920 MS.gene051343:intron 40.0%
AAGCTTCAAATCCATCCAAC+TGG - chr4.1:19493963-19493982 None:intergenic 40.0%
AATCCGTTTATTTACCCCTC+TGG + chr4.1:19491123-19491142 MS.gene051343:intron 40.0%
ACATGTCATTGAGGAAGTTG+TGG + chr4.1:19495480-19495499 MS.gene051343:CDS 40.0%
ACCAATGGATCAACTTTGCT+TGG - chr4.1:19492908-19492927 None:intergenic 40.0%
ACGTAACGAGCTCAATTCTA+GGG + chr4.1:19490947-19490966 MS.gene051343:CDS 40.0%
ACTAACAGGAAACAGCAGAA+TGG - chr4.1:19492657-19492676 None:intergenic 40.0%
AGTGTATTAGAGGGATGCTA+TGG + chr4.1:19494032-19494051 MS.gene051343:intron 40.0%
ATATCTAGGTGTGAGCTGTA+TGG + chr4.1:19491661-19491680 MS.gene051343:intron 40.0%
ATCCAGGATATCAATCCGAT+TGG - chr4.1:19494230-19494249 None:intergenic 40.0%
ATCCGTTTATTTACCCCTCT+GGG + chr4.1:19491124-19491143 MS.gene051343:intron 40.0%
ATCTTCGACCATAAAAGCCA+TGG - chr4.1:19493530-19493549 None:intergenic 40.0%
ATGGAGTAGGTTTAGGTAAG+AGG - chr4.1:19493450-19493469 None:intergenic 40.0%
ATGGTTGGGTTTCGGTAATA+TGG + chr4.1:19491257-19491276 MS.gene051343:intron 40.0%
ATTTGGCAAACTTTGTCGTC+TGG + chr4.1:19495068-19495087 MS.gene051343:intron 40.0%
ATTTGGTCACTGGCAAACTT+TGG + chr4.1:19491346-19491365 MS.gene051343:intron 40.0%
CAACATATTTCCCTTCTGGA+TGG - chr4.1:19492793-19492812 None:intergenic 40.0%
CAAGAACAAAGTCTTGGTCA+AGG + chr4.1:19492102-19492121 MS.gene051343:CDS 40.0%
CAATTGCAATTTGGACAGTG+AGG + chr4.1:19492008-19492027 MS.gene051343:intron 40.0%
CCAAGACTTTCAAAAAGCTC+AGG - chr4.1:19493145-19493164 None:intergenic 40.0%
CCGAGAAAAACATGTCATTG+AGG + chr4.1:19495471-19495490 MS.gene051343:CDS 40.0%
CGCTCCATCAATTATCTTCA+TGG + chr4.1:19493846-19493865 MS.gene051343:CDS 40.0%
CTGCATAAAATAGCGGCTAT+TGG - chr4.1:19492350-19492369 None:intergenic 40.0%
GATACTGACACAACATCAAC+TGG + chr4.1:19491574-19491593 MS.gene051343:intron 40.0%
GGAGAAATTGAGAGTAGTGA+AGG + chr4.1:19491321-19491340 MS.gene051343:intron 40.0%
GGCACAAGTAAACTCAACTT+AGG + chr4.1:19493560-19493579 MS.gene051343:intron 40.0%
GTCATGAGTTCATGACTAAC+AGG - chr4.1:19492671-19492690 None:intergenic 40.0%
GTGATACAAATCAACCCAGA+GGG - chr4.1:19491141-19491160 None:intergenic 40.0%
TAGTCACAGACCAATCTTGT+TGG + chr4.1:19491300-19491319 MS.gene051343:intron 40.0%
TCATAATCTTAACCGTCTCG+AGG + chr4.1:19490920-19490939 MS.gene051343:CDS 40.0%
TCGCGAACTGCATAAAATAG+CGG - chr4.1:19492357-19492376 None:intergenic 40.0%
TCTTGGAATAGCTCAACCAA+AGG + chr4.1:19493159-19493178 MS.gene051343:CDS 40.0%
TGAATTTGAAAACTGGGAGG+AGG - chr4.1:19491689-19491708 None:intergenic 40.0%
TGAGAGTAGTGAAGGTGATT+TGG + chr4.1:19491329-19491348 MS.gene051343:intron 40.0%
TGATACAAATCAACCCAGAG+GGG - chr4.1:19491140-19491159 None:intergenic 40.0%
TGTCGTCTGGATCAAAGTTT+GGG + chr4.1:19495081-19495100 MS.gene051343:intron 40.0%
TTGGGTTTATTCCATGGTGT+TGG + chr4.1:19495099-19495118 MS.gene051343:intron 40.0%
TTGTCGTCTGGATCAAAGTT+TGG + chr4.1:19495080-19495099 MS.gene051343:intron 40.0%
TTTAGACAACTGGGTGTAGA+TGG - chr4.1:19491199-19491218 None:intergenic 40.0%
TTTAGGTAAGAGGTCAAACC+TGG - chr4.1:19493440-19493459 None:intergenic 40.0%
TTTGAAAAACCACCGCTCAA+AGG - chr4.1:19491532-19491551 None:intergenic 40.0%
! AATGTTTTTCCTGTACCAGG+TGG - chr4.1:19493298-19493317 None:intergenic 40.0%
! AGTAACGGGGAACTAAACAT+GGG + chr4.1:19494914-19494933 MS.gene051343:intron 40.0%
! CAATCACTTTGTTTGATGGG+GGG + chr4.1:19494737-19494756 MS.gene051343:intron 40.0%
! CAGGAAAAACATTGTTGGCT+AGG + chr4.1:19493305-19493324 MS.gene051343:CDS 40.0%
! GCAATCACTTTGTTTGATGG+GGG + chr4.1:19494736-19494755 MS.gene051343:intron 40.0%
! GCCCATTGTTGTCTTTTCAA+AGG - chr4.1:19493700-19493719 None:intergenic 40.0%
! GTAACACTACTCCTTTTCAC+AGG + chr4.1:19493818-19493837 MS.gene051343:intron 40.0%
! GTGGGTTACTAGTTACAGTT+TGG + chr4.1:19494988-19495007 MS.gene051343:intron 40.0%
! TAGTAACGGGGAACTAAACA+TGG + chr4.1:19494913-19494932 MS.gene051343:intron 40.0%
! TCCAAGCAAAGTTGATCCAT+TGG + chr4.1:19492904-19492923 MS.gene051343:CDS 40.0%
!! CATTGGAGAAGGTTCTAGAA+TGG + chr4.1:19493393-19493412 MS.gene051343:CDS 40.0%
!! CCTGAGCTTTTTGAAAGTCT+TGG + chr4.1:19493142-19493161 MS.gene051343:CDS 40.0%
!! CGGTGGTTTTTCAAAGTAGT+AGG + chr4.1:19491537-19491556 MS.gene051343:intron 40.0%
!! CTAGTTACAGTTTGGTCTTG+CGG + chr4.1:19494996-19495015 MS.gene051343:intron 40.0%
!! CTTTTGCTGTAAGATCGGTT+GGG + chr4.1:19491760-19491779 MS.gene051343:intron 40.0%
!! GAGAAGGTTCTAGAATGGTT+AGG + chr4.1:19493398-19493417 MS.gene051343:CDS 40.0%
!! GGTAGTGGAGAACTAAACAT+GGG + chr4.1:19494966-19494985 MS.gene051343:intron 40.0%
!! GGTTGATTTGTATCACCCTT+TGG + chr4.1:19491145-19491164 MS.gene051343:intron 40.0%
!! TAGTTACAGTTTGGTCTTGC+GGG + chr4.1:19494997-19495016 MS.gene051343:intron 40.0%
!! TCTTTTGCTGTAAGATCGGT+TGG + chr4.1:19491759-19491778 MS.gene051343:intron 40.0%
AAACCAACCAAACAAGGGGA+GGG + chr4.1:19490837-19490856 MS.gene051343:CDS 45.0%
ACACGTTGGATAACCCCAAA+GGG - chr4.1:19491163-19491182 None:intergenic 45.0%
ACTTCGCCAACATATGAACC+CGG - chr4.1:19492067-19492086 None:intergenic 45.0%
AGTGGAGAACTAAACATGGG+TGG + chr4.1:19494969-19494988 MS.gene051343:intron 45.0%
ATAATGGCTGAGAGGATGGT+TGG + chr4.1:19491242-19491261 MS.gene051343:intron 45.0%
ATGCTTCACTTCTACTCCGA+CGG - chr4.1:19490784-19490803 None:intergenic 45.0%
ATGGAATCTGGAAGTGGCAA+TGG + chr4.1:19493898-19493917 MS.gene051343:CDS 45.0%
CAAATGCCGCTACACTATAG+TGG - chr4.1:19492279-19492298 None:intergenic 45.0%
CACCAATCGGATTGATATCC+TGG + chr4.1:19494225-19494244 MS.gene051343:CDS 45.0%
CACTATAGTGTAGCGGCATT+TGG + chr4.1:19492277-19492296 MS.gene051343:intron 45.0%
CAGGATATCAATCCGATTGG+TGG - chr4.1:19494227-19494246 None:intergenic 45.0%
CGAAGAGCAACTCTAGTAGA+TGG - chr4.1:19492854-19492873 None:intergenic 45.0%
CGTAACGAGCTCAATTCTAG+GGG + chr4.1:19490948-19490967 MS.gene051343:CDS 45.0%
CTGCCAAACCAACCAAACAA+GGG + chr4.1:19490832-19490851 MS.gene051343:CDS 45.0%
GAACTTCTCAACCAGTTGGA+TGG + chr4.1:19493949-19493968 MS.gene051343:CDS 45.0%
GATGATAATAGAGCAGCAGG+AGG - chr4.1:19494576-19494595 None:intergenic 45.0%
GATGGGCAAGAACAAAGTCT+TGG + chr4.1:19492096-19492115 MS.gene051343:CDS 45.0%
GGAAACTCAGTCCTTTGTCT+AGG - chr4.1:19492753-19492772 None:intergenic 45.0%
GGCGAAGTCGTTAAAGTGAT+GGG + chr4.1:19492079-19492098 MS.gene051343:CDS 45.0%
GGTGATACAAATCAACCCAG+AGG - chr4.1:19491142-19491161 None:intergenic 45.0%
GTGGAGAACTAAACATGGGT+GGG + chr4.1:19494970-19494989 MS.gene051343:intron 45.0%
TAATGGCTGAGAGGATGGTT+GGG + chr4.1:19491243-19491262 MS.gene051343:intron 45.0%
TAGAGGACATAATGGCTGAG+AGG + chr4.1:19491234-19491253 MS.gene051343:intron 45.0%
TCTGCCAAACCAACCAAACA+AGG + chr4.1:19490831-19490850 MS.gene051343:CDS 45.0%
TGCCAAACCAACCAAACAAG+GGG + chr4.1:19490833-19490852 MS.gene051343:CDS 45.0%
TGGCGAAGTCGTTAAAGTGA+TGG + chr4.1:19492078-19492097 MS.gene051343:CDS 45.0%
TTCTTCAGGTCCATCCAGAA+GGG + chr4.1:19492780-19492799 MS.gene051343:intron 45.0%
TTGATTGGATTGCTGGGTAG+TGG + chr4.1:19494951-19494970 MS.gene051343:intron 45.0%
TTTCTTCAGGTCCATCCAGA+AGG + chr4.1:19492779-19492798 MS.gene051343:intron 45.0%
TTTGGACAGTGAGGATGCTT+CGG + chr4.1:19492017-19492036 MS.gene051343:intron 45.0%
! ACTTTGTTTGATGGGGGGTA+AGG + chr4.1:19494742-19494761 MS.gene051343:intron 45.0%
! CAGTATTGGATCTGCTCGTA+TGG + chr4.1:19493879-19493898 MS.gene051343:CDS 45.0%
! CTCGACTTCCATGGCTTTTA+TGG + chr4.1:19493519-19493538 MS.gene051343:intron 45.0%
! GAGAAGATGAATGGAGCATC+TGG + chr4.1:19494503-19494522 MS.gene051343:CDS 45.0%
! GGTTTGGGTCTTTCTAGCAT+GGG + chr4.1:19491381-19491400 MS.gene051343:intron 45.0%
! GTTTGGGTCTTTCTAGCATG+GGG + chr4.1:19491382-19491401 MS.gene051343:intron 45.0%
! TGACGTTTTCTCGACTTCCA+TGG + chr4.1:19493510-19493529 MS.gene051343:intron 45.0%
! TGGTAAAGTGCCACTATAGC+TGG - chr4.1:19492259-19492278 None:intergenic 45.0%
! TGTACATTCATCAGGGTGTC+TGG + chr4.1:19493349-19493368 MS.gene051343:CDS 45.0%
!! ACAGAATCTTGGTTGGCCTA+TGG + chr4.1:19492591-19492610 MS.gene051343:intron 45.0%
!! AGGTTTTGATGGCCACCAAT+CGG + chr4.1:19494212-19494231 MS.gene051343:intron 45.0%
!! AGTGAAGGTGATTTGGTCAC+TGG + chr4.1:19491336-19491355 MS.gene051343:intron 45.0%
!! AGTTACAGTTTGGTCTTGCG+GGG + chr4.1:19494998-19495017 MS.gene051343:intron 45.0%
!! GAATGTTTGCTCTGAGAGAG+AGG + chr4.1:19495387-19495406 MS.gene051343:CDS 45.0%
!! GACACAGGAGGATTTTGAGA+TGG + chr4.1:19495421-19495440 MS.gene051343:CDS 45.0%
!! GGGAACTTTTTGTTATGGCC+AGG + chr4.1:19493419-19493438 MS.gene051343:CDS 45.0%
!! GGGTAGTGGAGAACTAAACA+TGG + chr4.1:19494965-19494984 MS.gene051343:intron 45.0%
AACGGGGAACTAAACATGGG+TGG + chr4.1:19494917-19494936 MS.gene051343:intron 50.0%
ACAGCCATGTATGCAGACAG+AGG - chr4.1:19493218-19493237 None:intergenic 50.0%
ACGGGGAACTAAACATGGGT+GGG + chr4.1:19494918-19494937 MS.gene051343:intron 50.0%
AGTAGAAGTGAAGCATGCCG+AGG + chr4.1:19490788-19490807 MS.gene051343:CDS 50.0%
ATCTTCCTGTCAATCCGTCC+AGG - chr4.1:19494268-19494287 None:intergenic 50.0%
CAAACCAACCAAACAAGGGG+AGG + chr4.1:19490836-19490855 MS.gene051343:CDS 50.0%
CCATCCTCTGTCTGCATACA+TGG + chr4.1:19493211-19493230 MS.gene051343:intron 50.0%
CCATGTATGCAGACAGAGGA+TGG - chr4.1:19493214-19493233 None:intergenic 50.0%
CTGAGAGGATGGTTGGGTTT+CGG + chr4.1:19491249-19491268 MS.gene051343:intron 50.0%
CTTCTTCATCACCTTGGCCA+CGG - chr4.1:19495447-19495466 None:intergenic 50.0%
CTTGATCCACTCCACCATGA+TGG + chr4.1:19492152-19492171 MS.gene051343:intron 50.0%
GACACGTTGGATAACCCCAA+AGG - chr4.1:19491164-19491183 None:intergenic 50.0%
GCTCGTATGGAATCTGGAAG+TGG + chr4.1:19493892-19493911 MS.gene051343:CDS 50.0%
GCTGGAACTTCTCAACCAGT+TGG + chr4.1:19493945-19493964 MS.gene051343:CDS 50.0%
GGAAGAACTGCAGCTTCTTC+AGG + chr4.1:19492039-19492058 MS.gene051343:CDS 50.0%
GGACATAATGGCTGAGAGGA+TGG + chr4.1:19491238-19491257 MS.gene051343:intron 50.0%
GGATCTGCTCGTATGGAATC+TGG + chr4.1:19493886-19493905 MS.gene051343:CDS 50.0%
GGTCTCCTTCTTCATCACCT+TGG - chr4.1:19495453-19495472 None:intergenic 50.0%
GTAGAAGTGAAGCATGCCGA+GGG + chr4.1:19490789-19490808 MS.gene051343:CDS 50.0%
GTTATCCAACGTGTCGCAGA+TGG + chr4.1:19491169-19491188 MS.gene051343:intron 50.0%
TCATAGTGGTGAGGGTGACT+GGG + chr4.1:19495043-19495062 MS.gene051343:intron 50.0%
TGAAGTGCAGCGTACTATGC+TGG + chr4.1:19493927-19493946 MS.gene051343:CDS 50.0%
TGTCAACGTCACCAACACCA+TGG - chr4.1:19495113-19495132 None:intergenic 50.0%
TTCATAGTGGTGAGGGTGAC+TGG + chr4.1:19495042-19495061 MS.gene051343:intron 50.0%
TTGGACAGTGAGGATGCTTC+GGG + chr4.1:19492018-19492037 MS.gene051343:intron 50.0%
! AACATTGTTGGCTAGGGCAG+TGG + chr4.1:19493312-19493331 MS.gene051343:CDS 50.0%
! AGCATCTGGTGCTGAGCTTA+AGG + chr4.1:19494517-19494536 MS.gene051343:CDS 50.0%
! ATTGAGCCATCATGGTGGAG+TGG - chr4.1:19492161-19492180 None:intergenic 50.0%
! CACAGGGTGTCTTGCTCTAT+GGG + chr4.1:19493272-19493291 MS.gene051343:intron 50.0%
! CTCCCCTTGTTTGGTTGGTT+TGG - chr4.1:19490838-19490857 None:intergenic 50.0%
! GGGTTTGGGTCTTTCTAGCA+TGG + chr4.1:19491380-19491399 MS.gene051343:intron 50.0%
! GTCTTTCTAGCATGGGGAGT+CGG + chr4.1:19491388-19491407 MS.gene051343:intron 50.0%
! TCACAGGGTGTCTTGCTCTA+TGG + chr4.1:19493271-19493290 MS.gene051343:intron 50.0%
!! GTTTGCTCTGAGAGAGAGGA+GGG + chr4.1:19495391-19495410 MS.gene051343:CDS 50.0%
!! TGTTTGCTCTGAGAGAGAGG+AGG + chr4.1:19495390-19495409 MS.gene051343:CDS 50.0%
AAGCACTCCTGAGACCTGGA+CGG + chr4.1:19494251-19494270 MS.gene051343:CDS 55.0%
ACTGCAGCTTCTTCAGGAGC+CGG + chr4.1:19492045-19492064 MS.gene051343:CDS 55.0%
CAGGAGCCGGGTTCATATGT+TGG + chr4.1:19492058-19492077 MS.gene051343:CDS 55.0%
CGTGGCCAAGGTGATGAAGA+AGG + chr4.1:19495445-19495464 MS.gene051343:CDS 55.0%
GATCAAGCACTCCTGAGACC+TGG + chr4.1:19494247-19494266 MS.gene051343:CDS 55.0%
GGTGAAGGAGCTGAAGCTCA+TGG - chr4.1:19490890-19490909 None:intergenic 55.0%
GTGAACCATCTGCGACACGT+TGG - chr4.1:19491177-19491196 None:intergenic 55.0%
GTGAGGGTGACTGGGTCATT+TGG + chr4.1:19495051-19495070 MS.gene051343:intron 55.0%
TAGGCTGTGTGCACTGAAGC+TGG + chr4.1:19495365-19495384 MS.gene051343:intron 55.0%
TGTCAATCCGTCCAGGTCTC+AGG - chr4.1:19494261-19494280 None:intergenic 55.0%
TTGGCAGAGCAATGCTCCTC+CGG - chr4.1:19490819-19490838 None:intergenic 55.0%
! AGACCCTCCCCTTGTTTGGT+TGG - chr4.1:19490843-19490862 None:intergenic 55.0%
!! GTCTCAGGAGTGCTTGATCC+AGG - chr4.1:19494246-19494265 None:intergenic 55.0%
!! TGAGACCTGGACGGATTGAC+AGG + chr4.1:19494260-19494279 MS.gene051343:CDS 55.0%
!!! GGAGGATTTTGAGATGGCCG+TGG + chr4.1:19495427-19495446 MS.gene051343:CDS 55.0%
!!! TTTTGAGATGGCCGTGGCCA+AGG + chr4.1:19495433-19495452 MS.gene051343:CDS 55.0%
ACGGAGACCCTCCCCTTGTT+TGG - chr4.1:19490847-19490866 None:intergenic 60.0%
CGTTACGTTGCGCCTCGAGA+CGG - chr4.1:19490935-19490954 None:intergenic 60.0%
CTCTATGGGCCACCTGGTAC+AGG + chr4.1:19493286-19493305 MS.gene051343:CDS 60.0%
CTGCAGCTTCTTCAGGAGCC+GGG + chr4.1:19492046-19492065 MS.gene051343:CDS 60.0%
GGAGCGTGCTCCCTGTGAAA+AGG - chr4.1:19493832-19493851 None:intergenic 60.0%
GTCTTGCTCTATGGGCCACC+TGG + chr4.1:19493280-19493299 MS.gene051343:CDS 60.0%
! GAGGAGGGTACACGTGACAC+AGG + chr4.1:19495406-19495425 MS.gene051343:CDS 60.0%
! GAGGGTACACGTGACACAGG+AGG + chr4.1:19495409-19495428 MS.gene051343:CDS 60.0%
ATGCTCCTCCGGTGCACCCT+CGG - chr4.1:19490808-19490827 None:intergenic 65.0%
! GAAGCATGCCGAGGGTGCAC+CGG + chr4.1:19490797-19490816 MS.gene051343:CDS 65.0%
! GCATGCCGAGGGTGCACCGG+AGG + chr4.1:19490800-19490819 MS.gene051343:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 19490774 19495508 19490774 ID=MS.gene051343
chr4.1 mRNA 19490774 19495508 19490774 ID=MS.gene051343.t1;Parent=MS.gene051343
chr4.1 exon 19490774 19490969 19490774 ID=MS.gene051343.t1.exon1;Parent=MS.gene051343.t1
chr4.1 CDS 19490774 19490969 19490774 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19492026 19492123 19492026 ID=MS.gene051343.t1.exon2;Parent=MS.gene051343.t1
chr4.1 CDS 19492026 19492123 19492026 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19492788 19493012 19492788 ID=MS.gene051343.t1.exon3;Parent=MS.gene051343.t1
chr4.1 CDS 19492788 19493012 19492788 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19493118 19493180 19493118 ID=MS.gene051343.t1.exon4;Parent=MS.gene051343.t1
chr4.1 CDS 19493118 19493180 19493118 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19493277 19493440 19493277 ID=MS.gene051343.t1.exon5;Parent=MS.gene051343.t1
chr4.1 CDS 19493277 19493440 19493277 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19493840 19493996 19493840 ID=MS.gene051343.t1.exon6;Parent=MS.gene051343.t1
chr4.1 CDS 19493840 19493996 19493840 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19494214 19494312 19494214 ID=MS.gene051343.t1.exon7;Parent=MS.gene051343.t1
chr4.1 CDS 19494214 19494312 19494214 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19494428 19494538 19494428 ID=MS.gene051343.t1.exon8;Parent=MS.gene051343.t1
chr4.1 CDS 19494428 19494538 19494428 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
chr4.1 exon 19495368 19495508 19495368 ID=MS.gene051343.t1.exon9;Parent=MS.gene051343.t1
chr4.1 CDS 19495368 19495508 19495368 ID=cds.MS.gene051343.t1;Parent=MS.gene051343.t1
Gene Sequence

>MS.gene051343

ATGGCTGCCGTCGGAGTAGAAGTGAAGCATGCCGAGGGTGCACCGGAGGAGCATTGCTCTGCCAAACCAACCAAACAAGGGGAGGGTCTCCGTCAATACTATACTCAGCACATCCATGAGCTTCAGCTCCTTCACCGTCAAAAGAATCATAATCTTAACCGTCTCGAGGCGCAACGTAACGAGCTCAATTCTAGGGGTTCGTTTACTCTAACCCTATTCCTCTTTTTTATTCTTGAATTGCTATATTTATGAATCTATTTTTGTGTTTTTTTTTTTTGCTTTTAGTACAATTATTCAATTCAATAGATAATAAGAGGATATGGTGTGTGTTTGTTTGCCTCAAATTTTGAATCCGTTTATTTACCCCTCTGGGTTGATTTGTATCACCCTTTGGGGTTATCCAACGTGTCGCAGATGGTTCACCATCTACACCCAGTTGTCTAAAACAATAAAAAATGATTAGAGGACATAATGGCTGAGAGGATGGTTGGGTTTCGGTAATATGGAATTCAACAAGGTTGGTTTCTAGTCACAGACCAATCTTGTTGGAGAAATTGAGAGTAGTGAAGGTGATTTGGTCACTGGCAAACTTTGGTTTGTTTATGTGGGTTTGGGTCTTTCTAGCATGGGGAGTCGGTTTGTGATGATCACTATATATACACACAAAACCAGGATAAGCTTATGTTTGTTTCTATTCTTTTTCCTAATGTATTTGAGTTTTATTTTGGAGTCTATTGTTTTACGACAAATATTGTCCTTTGAGCGGTGGTTTTTCAAAGTAGTAGGCACAAAAATGATCAGATACTGACACAACATCAACTGGTTACTGATGAATGATAATAATCAGATCAAACTGTTGCTTAAGTTATTCATTTATCCAATAAATAATATCTAGGTGTGAGCTGTATGGCTCCTCCTCCCAGTTTTCAAATTCATATCTTCTATCACATCAAACTTATTAGGAAGGTTATTCACAAGTGCATTTTCTTTTGCTGTAAGATCGGTTGGGCTGTCATTTGCTATATCACTTTACACAATAATTTACACGATAATATTCAAATTCATCGATCTTTAACTGATTTTCTATCAACTTTATACACCTTCACTAATTTACTATCATTTTTATACACCTTCAAGAATATGATGTATCAAAGTTGCTTTTTTTATACATATTCGAAGTCATTGTCAAATTGTTTTTTCCCCAAAAATAACTTTTCTGTATTTGTCCCTGATTCAATTGCAATTTGGACAGTGAGGATGCTTCGGGAAGAACTGCAGCTTCTTCAGGAGCCGGGTTCATATGTTGGCGAAGTCGTTAAAGTGATGGGCAAGAACAAAGTCTTGGTCAAGGTCAGATCACTTTTCGTTTTGATTTCATCTTGATCCACTCCACCATGATGGCTCAATTTGTTTTTTTTCTTCCGCTATCTGTACTGTTATATATCAGTCTATCATTATCATCTGCTCAGTGTTGTTAAATAGCCAGCTATAGTGGCACTTTACCACTATAGTGTAGCGGCATTTGGAGAAACCACTATTGTTGCATAATACACTATTTATTACAAAATGTTGTCCAATAGCCGCTATTTTATGCAGTTCGCGATTGACATCATTTCATCTGCTTGACTTGACATCTCTCTATCTCTATCTCTTTTCATTATTCATTGTTGGAATTGTCTATGCTAAACCCCGTATTGATTAGTCTAAATACTTATGCTTCTAAACCTGTATTGTTTAATCTAAATTCTTATGTACATAGTTAGAATTATACAATGTAGTCCTTAAATGCGAAGTGAAGACTTATATCCTAAAATAGTACAGAATCTTGGTTGGCCTATGGAATTTTTATCCTTATAAATCACTTTAATATTGACTAATATCCATTCTGCTGTTTCCTGTTAGTCATGAACTCATGACTATATCTAATGGCAGGCAATATCCACCTGTGCATGAAATTAATAATAAGAACAAAAAATCCTAGACAAAGGACTGAGTTTCCATTACTTTTCTTCAGGTCCATCCAGAAGGGAAATATGTTGTTGATATTGATAAAAATATTGACATCACAAAGATTACACCATCTACTAGAGTTGCTCTTCGCAACGACAGTTATGTGCTTCATTTAGTTCTTCCAAGCAAAGTTGATCCATTGGTTAATCTGATGAAAGTTGAGAAAGTTCCTGATTCTACATATGACATGATTGGTGGTTTAGACCAACAAATCAAAGAAATAAAAGAGGTAAGTTGCATGACATTCTTTTGATAATAATATTTAACGTCAAAGTTAATTTTCTGTTGAGTCTGAGAAGTATTTATCTATGTTCATTTACATCAAATTTTACAGGTCATTGAGCTTCCAATTAAACATCCTGAGCTTTTTGAAAGTCTTGGAATAGCTCAACCAAAGGTAATATTGCATGAGTTATAGCTGAATTTGCCATCCTCTGTCTGCATACATGGCTGTAAATTTTTATTTTTGCTTACTCTATTTTATGTATCACAGGGTGTCTTGCTCTATGGGCCACCTGGTACAGGAAAAACATTGTTGGCTAGGGCAGTGGCACATCATACTGATTGTACATTCATCAGGGTGTCTGGTTCTGAACTTGTTCAGAAATACATTGGAGAAGGTTCTAGAATGGTTAGGGAACTTTTTGTTATGGCCAGGTTTGACCTCTTACCTAAACCTACTCCATTCATTATGTGTAGCATCGACATAAATAAGAGGGAGAAAAATGACGTTTTCTCGACTTCCATGGCTTTTATGGTCGAAGATATATCTGATGGGCACAAGTAAACTCAACTTAGGATGAAGATAGATCCCTAGTAACTGAGTTTTTGAAGTTCAAATCTGAAGTTGTATAAAATGTATAATTGTAATGTGGTGTGCATATATGTATGTTTTTCATTTTCCATTAACTGACCTTTGAAAAGACAACAATGGGCATTTATTCCTAAAAAAACAATGTCTCACAATTTTGATTCTTGAGTTTCCATGCTCATTTGAAGTAAATGTGTTCTGAGGACTTGCTTATCCAATATATGTAACACTACTCCTTTTCACAGGGAGCACGCTCCATCAATTATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGTATGGAATCTGGAAGTGGCAATGGTGATAGTGAAGTGCAGCGTACTATGCTGGAACTTCTCAACCAGTTGGATGGATTTGAAGCTTCCAATAAGATCAAGGTAATTTTTTTTTTTTTTTTTAATGATGCTATGGTAGTGTATTAGAGGGATGCTATGGTAGTGTATTAGAGGGAATTCCAAAATTGGCAACATGTGTGTTGTAGTAAATGTAAATATAAAACTGTAAGAGGGACATATTTTATTAACTCTATATTCTTAATTTGAGTTATACGTTCACAATTTAGAGGACATAATGAAGAGAAAATTGCAATTATAGGTTTTGATGGCCACCAATCGGATTGATATCCTGGATCAAGCACTCCTGAGACCTGGACGGATTGACAGGAAGATTGAATTTCCAAATCCTAATGAAGAGGTTTGCATCTTTGTCTTCATGTTACTCTTTGATATGATTGTATTGAGAAAGAAGATGCACCTTCAGCATACATATACATATACCATTTACTGAAAACAACTATATTTTTATGCAGTCTCGCCGAGATATCTTGAAAATCCATTCAAGAAGAATGAATTTAATGCGTGGTATTGACTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCTGAGCTTAAGGTATGTTCTTAATTTGCACTGCATCTTTTTTTCTCCTCCTGCTGCTCTATTATCATCTAAAATATTGTCATCGGCCTTGTTGAAGCAATTAGTAGTGGAAAAGCTGAATTCATTTGGTTCTTGTAAAGCTTTACTCTGTTTGCACTTATTGAGATAAACAACGGGTGCCTTTCATTTTCATATAATATTCTCATTATGCAATCACTTTGTTTGATGGGGGGTAAGGTTTCAGAGAAATTTTACAATGCGAAACAAAGGTAAAAGTTTTAACCAACATTAACATGTTGTTATTGTTGTCTAAGATATTATCTCAGGTCATGAGGAAAATGAAGTGTTTCAAATTTCAATAGTATGAAATATAAAACTGGGTGTAATAGTAACGGGGAACTAAACATGGGTGGGTTACTAATAGTTGATTGGATTGCTGGGTAGTGGAGAACTAAACATGGGTGGGTTACTAGTTACAGTTTGGTCTTGCGGGGTATATTAACAGTTATAAACACTTCATAGTGGTGAGGGTGACTGGGTCATTTGGCAAACTTTGTCGTCTGGATCAAAGTTTGGGTTTATTCCATGGTGTTGGTGACGTTGACAATGACTGTGTTGTTGATATTTATGTGTTTTTGATAAGTGAATCCCCTTTCACAATTCCTACTATTCAGATAGAATTATGCTGTAATGTCATAATGGTAAAAGTGAATTGCTATGAATTTACGTGTTCATGGTAACAATAGAATGATTTGTTTGTTGATGTTTGTAAGCTTAAATTAACACATTATTTCAAGTGTGGCCTAGTATGCTCAATTTTCTGTGCTTTTATTTTATGTAGGCTGTGTGCACTGAAGCTGGAATGTTTGCTCTGAGAGAGAGGAGGGTACACGTGACACAGGAGGATTTTGAGATGGCCGTGGCCAAGGTGATGAAGAAGGAGACCGAGAAAAACATGTCATTGAGGAAGTTGTGGAAGTAA

Protein sequence

>MS.gene051343.t1

MAAVGVEVKHAEGAPEEHCSAKPTKQGEGLRQYYTQHIHELQLLHRQKNHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRRDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK