Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37846.t1 | XP_003617066.1 | 90.3 | 565 | 51 | 1 | 1 | 561 | 1 | 565 | 6.90E-281 | 976.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37846.t1 | P14891 | 75.3 | 535 | 119 | 4 | 36 | 557 | 48 | 582 | 1.3e-224 | 780.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37846.t1 | G7KHH3 | 90.3 | 565 | 51 | 1 | 1 | 561 | 1 | 565 | 5.0e-281 | 976.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37846 | MS.gene02757 | PPI |
| MS.gene003352 | MS.gene37846 | PPI |
| MS.gene37846 | MS.gene02144 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37846.t1 | MTR_5g087550 | 93.628 | 565 | 32 | 1 | 1 | 561 | 1 | 565 | 0.0 | 1050 |
| MS.gene37846.t1 | MTR_5g024880 | 67.993 | 578 | 157 | 7 | 1 | 561 | 1 | 567 | 0.0 | 788 |
| MS.gene37846.t1 | MTR_5g026450 | 72.190 | 525 | 133 | 4 | 43 | 561 | 25 | 542 | 0.0 | 777 |
| MS.gene37846.t1 | MTR_5g026460 | 72.190 | 525 | 133 | 4 | 43 | 561 | 25 | 542 | 0.0 | 777 |
| MS.gene37846.t1 | MTR_5g026480 | 72.190 | 525 | 133 | 4 | 43 | 561 | 25 | 542 | 0.0 | 777 |
| MS.gene37846.t1 | MTR_5g026430 | 72.000 | 525 | 134 | 4 | 43 | 561 | 25 | 542 | 0.0 | 775 |
| MS.gene37846.t1 | MTR_5g091050 | 71.645 | 529 | 126 | 6 | 43 | 561 | 31 | 545 | 0.0 | 771 |
| MS.gene37846.t1 | MTR_5g026500 | 71.293 | 526 | 139 | 4 | 43 | 561 | 30 | 550 | 0.0 | 769 |
| MS.gene37846.t1 | MTR_8g072640 | 66.162 | 594 | 157 | 8 | 1 | 561 | 1 | 583 | 0.0 | 765 |
| MS.gene37846.t1 | MTR_5g024880 | 65.531 | 499 | 144 | 9 | 1 | 482 | 1 | 488 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37846.t1 | AT1G76490 | 71.821 | 582 | 139 | 6 | 1 | 557 | 51 | 632 | 0.0 | 835 |
| MS.gene37846.t1 | AT2G17370 | 65.780 | 564 | 172 | 8 | 2 | 556 | 3 | 554 | 0.0 | 740 |
Find 179 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCGTTTATCTACCTTCT+AGG | 0.162002 | 5.3:+70360585 | MS.gene37846:CDS |
| CTAATGTCTGCCATTGCTTC+AGG | 0.225025 | 5.3:+70363704 | MS.gene37846:CDS |
| AGAAACCTGCCGCAGTTAAT+TGG | 0.233252 | 5.3:+70363129 | MS.gene37846:CDS |
| TTCCCTGACATGGATGTTAT+TGG | 0.284863 | 5.3:+70362413 | MS.gene37846:CDS |
| CTTGCTGGTTCTGCTGTTGC+TGG | 0.297128 | 5.3:+70363266 | MS.gene37846:CDS |
| CTCTTGGCAACCATTGTTGC+TGG | 0.337492 | 5.3:+70363656 | MS.gene37846:CDS |
| AAGATTCATTTCCCGCGTTC+TGG | 0.338730 | 5.3:+70361843 | MS.gene37846:intron |
| GGGAGAGCATCAGAGGCTTT+TGG | 0.339690 | 5.3:-70360411 | None:intergenic |
| TTGGAAGGTTTACCATTAGA+AGG | 0.342151 | 5.3:+70360894 | MS.gene37846:CDS |
| ATGGATGTTATTGGCATATC+AGG | 0.348723 | 5.3:+70362422 | MS.gene37846:CDS |
| CGGTGGTGGTTTGCGGCGGC+CGG | 0.353787 | 5.3:-70360329 | None:intergenic |
| TCTGCTGTTGCTGGCACTCT+TGG | 0.363031 | 5.3:+70363275 | MS.gene37846:CDS |
| GTTGGATGGATTTGAATATA+CGG | 0.364431 | 5.3:+70361004 | MS.gene37846:CDS |
| ATCTACCTTCTAGGTTTCTT+CGG | 0.369751 | 5.3:+70360594 | MS.gene37846:CDS |
| AGGCTGATTGGCGGTGGTGT+TGG | 0.378910 | 5.3:-70360697 | None:intergenic |
| ACGAACATCAGGAAGATCTT+TGG | 0.383156 | 5.3:+70360875 | MS.gene37846:CDS |
| GGAAACAATGGCGGCGAGTT+CGG | 0.393903 | 5.3:-70360556 | None:intergenic |
| TGGTTTGCGGCGGCCGGCGA+TGG | 0.401498 | 5.3:-70360323 | None:intergenic |
| TCGTAATCAAATCCTTCTAA+TGG | 0.402585 | 5.3:-70360906 | None:intergenic |
| CGGCCGCCGCAAACCACCAC+CGG | 0.407539 | 5.3:+70360330 | MS.gene37846:CDS |
| CTCCACTAGGGCAGCCACCT+TGG | 0.410701 | 5.3:-70363225 | None:intergenic |
| GGCGACTACAGAAGGGTGTT+TGG | 0.411168 | 5.3:+70361034 | MS.gene37846:CDS |
| TTCCATCATTGTTATGCAAT+GGG | 0.418759 | 5.3:-70363381 | None:intergenic |
| CAAATTCCGGTGGGTGTGGC+AGG | 0.422500 | 5.3:+70360972 | MS.gene37846:CDS |
| AAGGTCTCTCCCATCATTTA+CGG | 0.422951 | 5.3:-70363405 | None:intergenic |
| GTGTAAAGCTATATATGCTT+CGG | 0.423083 | 5.3:+70361076 | MS.gene37846:CDS |
| GGTAGGGTATATTCAAATTC+CGG | 0.423676 | 5.3:+70360959 | MS.gene37846:CDS |
| GGTATTCAGTGTGCTATGGC+TGG | 0.436039 | 5.3:+70362287 | MS.gene37846:CDS |
| TCTGAACATAATGAGGGTTC+AGG | 0.440108 | 5.3:-70360738 | None:intergenic |
| ATGGTGTTGGTGAGGTAGAG+AGG | 0.442236 | 5.3:-70360438 | None:intergenic |
| ACGGCGCCGGTGGTGGTTTG+CGG | 0.442491 | 5.3:-70360336 | None:intergenic |
| TTCTTTAGGAAATTATTGTT+CGG | 0.442685 | 5.3:+70363103 | MS.gene37846:intron |
| ATCTTCCTCTGAACATAATG+AGG | 0.443881 | 5.3:-70360745 | None:intergenic |
| ATGCCAATAACATCCATGTC+AGG | 0.447589 | 5.3:-70362416 | None:intergenic |
| GGTCGCGACGGCGCCGGTGG+TGG | 0.447682 | 5.3:-70360343 | None:intergenic |
| CTTGAACATGCTTGGTGTGA+AGG | 0.450968 | 5.3:+70363598 | MS.gene37846:CDS |
| CCGGAGAGGCTGATTGGCGG+TGG | 0.451494 | 5.3:-70360703 | None:intergenic |
| CAAAGAAGATGTGGTGAAGA+AGG | 0.453751 | 5.3:+70363193 | MS.gene37846:CDS |
| TGTAAAGCTATATATGCTTC+GGG | 0.453864 | 5.3:+70361077 | MS.gene37846:CDS |
| GGCCGGCGATGGAGGTCCAT+TGG | 0.456069 | 5.3:-70360312 | None:intergenic |
| AAGAACGTTCTGCACCCCTT+TGG | 0.466291 | 5.3:-70362372 | None:intergenic |
| TCAATCCAATTAACTGCGGC+AGG | 0.468892 | 5.3:-70363134 | None:intergenic |
| GCTGTTGCTGGCACTCTTGG+CGG | 0.470685 | 5.3:+70363278 | MS.gene37846:CDS |
| TTGGTGAGGTAGAGAGGGAG+AGG | 0.473154 | 5.3:-70360432 | None:intergenic |
| TAATGTCTGCCATTGCTTCA+GGG | 0.473400 | 5.3:+70363705 | MS.gene37846:CDS |
| ACGCGCTTCTCATGATGGTT+GGG | 0.476220 | 5.3:+70360644 | MS.gene37846:CDS |
| AAGAGTCTCGAGTTTGATCC+TGG | 0.476503 | 5.3:-70363638 | None:intergenic |
| CACCCTTCTGTAGTCGCCAT+TGG | 0.478661 | 5.3:-70361029 | None:intergenic |
| TTCCCATTGCATAACAATGA+TGG | 0.478827 | 5.3:+70363379 | MS.gene37846:CDS |
| TAACTAAAATCTCATCTTGA+GGG | 0.480226 | 5.3:+70363774 | MS.gene37846:CDS |
| CTTCCATCATTGTTATGCAA+TGG | 0.481383 | 5.3:-70363382 | None:intergenic |
| AACTCTCAGGTGGGTACAGT+AGG | 0.482262 | 5.3:+70363542 | MS.gene37846:intron |
| CCACCGCCAATCAGCCTCTC+CGG | 0.484940 | 5.3:+70360703 | MS.gene37846:CDS |
| GCCGCAGTTAATTGGATTGA+GGG | 0.485552 | 5.3:+70363137 | MS.gene37846:CDS |
| ATGATGGAAGCCGTAAATGA+TGG | 0.485702 | 5.3:+70363395 | MS.gene37846:CDS |
| TCTGCTTGCTTGAACATGCT+TGG | 0.486251 | 5.3:+70363590 | MS.gene37846:CDS |
| TGTGGCAGGACCATTGTTGT+TGG | 0.487825 | 5.3:+70360986 | MS.gene37846:CDS |
| TATGAGATTTACATGTAGTA+CGG | 0.488443 | 5.3:+70362322 | MS.gene37846:CDS |
| GCAGGACCATTGTTGTTGGA+TGG | 0.491595 | 5.3:+70360990 | MS.gene37846:CDS |
| GCAACACGCGCTTCTCATGA+TGG | 0.493338 | 5.3:+70360639 | MS.gene37846:CDS |
| AGGGTTGGTCGCGACGGCGC+CGG | 0.495727 | 5.3:-70360349 | None:intergenic |
| CGTATTATCTCCTCCACAGA+TGG | 0.496364 | 5.3:+70360487 | MS.gene37846:CDS |
| TGGTGTTGGTGAGGTAGAGA+GGG | 0.497806 | 5.3:-70360437 | None:intergenic |
| ATGTAGTACGGGTGATGCCA+TGG | 0.499191 | 5.3:+70362334 | MS.gene37846:CDS |
| ACTCTCAGGTGGGTACAGTA+GGG | 0.499741 | 5.3:+70363543 | MS.gene37846:intron |
| CACGCGCTTCTCATGATGGT+TGG | 0.499824 | 5.3:+70360643 | MS.gene37846:CDS |
| AGTAGATTTGCCAGGTTGCT+AGG | 0.499869 | 5.3:+70362266 | MS.gene37846:CDS |
| ATTGGCGGTGGTGTTGGTCG+TGG | 0.502672 | 5.3:-70360691 | None:intergenic |
| GAAGAAGAGCGTGAAGAAGA+TGG | 0.505810 | 5.3:-70360457 | None:intergenic |
| TCAGGTCGAGTAGATTTGCC+AGG | 0.506358 | 5.3:+70362258 | MS.gene37846:intron |
| GGATGAACATGGTCTCCAAA+GGG | 0.506615 | 5.3:+70362357 | MS.gene37846:CDS |
| TGCCGCAGTTAATTGGATTG+AGG | 0.507886 | 5.3:+70363136 | MS.gene37846:CDS |
| TGCAAAATCACCTCAATGGA+TGG | 0.510987 | 5.3:-70363446 | None:intergenic |
| CAATACCGAAGAAACCTAGA+AGG | 0.514959 | 5.3:-70360599 | None:intergenic |
| GAAGCTTTACAACGAACATC+AGG | 0.515590 | 5.3:+70360864 | MS.gene37846:CDS |
| AGGATCAAACTCGAGACTCT+TGG | 0.517457 | 5.3:+70363640 | MS.gene37846:CDS |
| GGGATGAACATGGTCTCCAA+AGG | 0.517477 | 5.3:+70362356 | MS.gene37846:CDS |
| GATTTGAGACGGTGGGAATG+AGG | 0.521781 | 5.3:-70360369 | None:intergenic |
| TATTCAAATTCCGGTGGGTG+TGG | 0.523523 | 5.3:+70360968 | MS.gene37846:CDS |
| ATGAGATTTACATGTAGTAC+GGG | 0.530951 | 5.3:+70362323 | MS.gene37846:CDS |
| TCGAAATGATTTCCCTGACA+TGG | 0.532844 | 5.3:+70362403 | MS.gene37846:CDS |
| CGGAGATTGTTTCCGAGCCG+CGG | 0.533705 | 5.3:+70360830 | MS.gene37846:CDS |
| GCTAGGTATTCAGTGTGCTA+TGG | 0.535257 | 5.3:+70362283 | MS.gene37846:CDS |
| CACGACGAATTGCCGCGGCT+CGG | 0.537941 | 5.3:-70360842 | None:intergenic |
| GTTGGTCGCGACGGCGCCGG+TGG | 0.538330 | 5.3:-70360346 | None:intergenic |
| TGTAGTACGGGTGATGCCAT+GGG | 0.538474 | 5.3:+70362335 | MS.gene37846:CDS |
| AGAAACAATGTTACTAGCAT+GGG | 0.538801 | 5.3:-70363309 | None:intergenic |
| AACCAATGGACCTCCATCGC+CGG | 0.539913 | 5.3:+70360310 | None:intergenic |
| TACTCACTCGAATCGCGGCT+CGG | 0.540066 | 5.3:+70360810 | MS.gene37846:CDS |
| AGTGACAATGCCATCCATTG+AGG | 0.542652 | 5.3:+70363436 | MS.gene37846:CDS |
| CAGAAACAATGTTACTAGCA+TGG | 0.542986 | 5.3:-70363310 | None:intergenic |
| GGCGGTGGTGTTGGTCGTGG+TGG | 0.545841 | 5.3:-70360688 | None:intergenic |
| GGGATGCAAAATCACCTCAA+TGG | 0.547483 | 5.3:-70363450 | None:intergenic |
| TTGAACATGCTTGGTGTGAA+GGG | 0.547739 | 5.3:+70363599 | MS.gene37846:CDS |
| CCATGTTGTAGTTGTAACTG+AGG | 0.548943 | 5.3:-70361898 | None:intergenic |
| CTCTCAGGTGGGTACAGTAG+GGG | 0.552717 | 5.3:+70363544 | MS.gene37846:intron |
| GTTCCAATGGCGACTACAGA+AGG | 0.553048 | 5.3:+70361026 | MS.gene37846:CDS |
| TTTGCGGCGGCCGGCGATGG+AGG | 0.557103 | 5.3:-70360320 | None:intergenic |
| AGGGCAGTGTTGTGAAATGC+CGG | 0.557390 | 5.3:+70360938 | MS.gene37846:CDS |
| GGAGACCATGTTCATCCCCA+TGG | 0.558985 | 5.3:-70362351 | None:intergenic |
| GTATTCAGTGTGCTATGGCT+GGG | 0.560186 | 5.3:+70362288 | MS.gene37846:CDS |
| GGATCTTGTCACGCCATCTG+TGG | 0.561301 | 5.3:-70360500 | None:intergenic |
| GCGCCGGTGGTGGTTTGCGG+CGG | 0.561395 | 5.3:-70360333 | None:intergenic |
| GGAATGAGGGTTGGTCGCGA+CGG | 0.562280 | 5.3:-70360355 | None:intergenic |
| CATGAAGAGGAGTGGAGCTA+CGG | 0.562649 | 5.3:-70360521 | None:intergenic |
| TTGGTTGCTAGTACAAATAG+AGG | 0.563083 | 5.3:+70361053 | MS.gene37846:CDS |
| GTAACTAAAATCTCATCTTG+AGG | 0.563271 | 5.3:+70363773 | MS.gene37846:CDS |
| AGGGAGAGGGAGAGCATCAG+AGG | 0.566983 | 5.3:-70360418 | None:intergenic |
| AATGGTCCTGCCACACCCAC+CGG | 0.567755 | 5.3:-70360978 | None:intergenic |
| TGATGGAAGCCGTAAATGAT+GGG | 0.568019 | 5.3:+70363396 | MS.gene37846:CDS |
| GTTGGTCGTGGTGGTGATGA+CGG | 0.568459 | 5.3:-70360679 | None:intergenic |
| GTGAAATTGACGACATGAAG+AGG | 0.568568 | 5.3:-70360534 | None:intergenic |
| TTTCCGGAGAGGCTGATTGG+CGG | 0.576349 | 5.3:-70360706 | None:intergenic |
| AGCAATTATCAAAGAAGATG+TGG | 0.576726 | 5.3:+70363184 | MS.gene37846:CDS |
| GAGACGGTGGGAATGAGGGT+TGG | 0.577164 | 5.3:-70360364 | None:intergenic |
| GGTGCAAGCAAGGAGGAACC+AGG | 0.582386 | 5.3:+70363620 | MS.gene37846:CDS |
| TAAAACAGCTCCAGCAACAA+TGG | 0.583428 | 5.3:-70363666 | None:intergenic |
| GTAGATAAACGAAGCGATGA+GGG | 0.584394 | 5.3:-70360577 | None:intergenic |
| TGGTGAGGTAGAGAGGGAGA+GGG | 0.584669 | 5.3:-70360431 | None:intergenic |
| TCTTCCTCTGAACATAATGA+GGG | 0.585268 | 5.3:-70360744 | None:intergenic |
| CTTCCTACTCACTCGAATCG+CGG | 0.586640 | 5.3:+70360805 | MS.gene37846:CDS |
| TCTCAGGTGGGTACAGTAGG+GGG | 0.588143 | 5.3:+70363545 | MS.gene37846:intron |
| GAGCGTGAAGAAGATGGTGT+TGG | 0.589470 | 5.3:-70360451 | None:intergenic |
| AGTGTTGTGAAATGCCGGTA+GGG | 0.592083 | 5.3:+70360943 | MS.gene37846:CDS |
| TGAGCATGTTTAGCTCCACT+AGG | 0.592566 | 5.3:-70363238 | None:intergenic |
| TGCCAATAACATCCATGTCA+GGG | 0.592633 | 5.3:-70362415 | None:intergenic |
| TTGAGCTGGATCTTGACCTG+TGG | 0.594253 | 5.3:-70363345 | None:intergenic |
| CAGTGTTGTGAAATGCCGGT+AGG | 0.595497 | 5.3:+70360942 | MS.gene37846:CDS |
| GACCAAGGTGGCTGCCCTAG+TGG | 0.595928 | 5.3:+70363223 | MS.gene37846:CDS |
| GACTAGTTGCCCTGAAGCAA+TGG | 0.597061 | 5.3:-70363714 | None:intergenic |
| ATGATCTGTTGTATTTCATG+TGG | 0.597760 | 5.3:-70363742 | None:intergenic |
| TGGTGTGAAGGGTGCAAGCA+AGG | 0.600451 | 5.3:+70363610 | MS.gene37846:CDS |
| TGATGCCATGGGGATGAACA+TGG | 0.600533 | 5.3:+70362346 | MS.gene37846:CDS |
| ATTTGAATATACGGTTCCAA+TGG | 0.603145 | 5.3:+70361013 | MS.gene37846:CDS |
| TTAATTGGATTGAGGGACGC+GGG | 0.604701 | 5.3:+70363144 | MS.gene37846:CDS |
| TCTTGTCACGCCATCTGTGG+AGG | 0.605289 | 5.3:-70360497 | None:intergenic |
| ATTGTAAACTCCGTCGTGGA+GGG | 0.605313 | 5.3:+70360774 | MS.gene37846:CDS |
| AGGGTATATTCAAATTCCGG+TGG | 0.606973 | 5.3:+70360962 | MS.gene37846:CDS |
| GAGCATGTTTAGCTCCACTA+GGG | 0.606988 | 5.3:-70363237 | None:intergenic |
| ATTTGAGACGGTGGGAATGA+GGG | 0.610172 | 5.3:-70360368 | None:intergenic |
| TGTCAGGGAAATCATTTCGA+AGG | 0.610857 | 5.3:-70362400 | None:intergenic |
| ACATCAGGAAGATCTTTGGA+AGG | 0.611811 | 5.3:+70360879 | MS.gene37846:CDS |
| CGAAGCGATGAGGGAAACAA+TGG | 0.612271 | 5.3:-70360568 | None:intergenic |
| GGAATTTGAATATACCCTAC+CGG | 0.615358 | 5.3:-70360957 | None:intergenic |
| GGTAGATAAACGAAGCGATG+AGG | 0.616427 | 5.3:-70360578 | None:intergenic |
| GGAACGTGATTTGAGACGGT+GGG | 0.616597 | 5.3:-70360376 | None:intergenic |
| GAGGGGAACGTGATTTGAGA+CGG | 0.616715 | 5.3:-70360380 | None:intergenic |
| GTTAATTGGATTGAGGGACG+CGG | 0.624111 | 5.3:+70363143 | MS.gene37846:CDS |
| AATTGTAAACTCCGTCGTGG+AGG | 0.625764 | 5.3:+70360773 | MS.gene37846:CDS |
| TTCAATTGTAAACTCCGTCG+TGG | 0.627810 | 5.3:+70360770 | MS.gene37846:CDS |
| TGGTTGCTAGTACAAATAGA+GGG | 0.629909 | 5.3:+70361054 | MS.gene37846:CDS |
| CCTCAGTTACAACTACAACA+TGG | 0.630725 | 5.3:+70361898 | MS.gene37846:CDS |
| CAGCAACAGCAGAACCAGCA+AGG | 0.636800 | 5.3:-70363265 | None:intergenic |
| TGAAGAAGATGGTGTTGGTG+AGG | 0.637139 | 5.3:-70360446 | None:intergenic |
| ATTGACGACATGAAGAGGAG+TGG | 0.638509 | 5.3:-70360529 | None:intergenic |
| TCAAATCCATCCAACAACAA+TGG | 0.643648 | 5.3:-70360996 | None:intergenic |
| TGAACCCTCATTATGTTCAG+AGG | 0.645685 | 5.3:+70360740 | MS.gene37846:CDS |
| GATGAACATGGTCTCCAAAG+GGG | 0.647108 | 5.3:+70362358 | MS.gene37846:CDS |
| ACACTGAATACCTAGCAACC+TGG | 0.648317 | 5.3:-70362276 | None:intergenic |
| GGGAACGTGATTTGAGACGG+TGG | 0.654216 | 5.3:-70360377 | None:intergenic |
| GAGCCGCGATTCGAGTGAGT+AGG | 0.656035 | 5.3:-70360808 | None:intergenic |
| TTCCAATGGCGACTACAGAA+GGG | 0.659674 | 5.3:+70361027 | MS.gene37846:CDS |
| GGGTATATTCAAATTCCGGT+GGG | 0.660198 | 5.3:+70360963 | MS.gene37846:CDS |
| AGCGATGAGGGAAACAATGG+CGG | 0.660738 | 5.3:-70360565 | None:intergenic |
| ACATAATGAGGGTTCAGGTG+AGG | 0.664851 | 5.3:-70360733 | None:intergenic |
| TTCGCAATATACCAGAACGC+GGG | 0.670349 | 5.3:-70361854 | None:intergenic |
| CGCGATTCGAGTGAGTAGGA+AGG | 0.675620 | 5.3:-70360804 | None:intergenic |
| CTTCGCAATATACCAGAACG+CGG | 0.677032 | 5.3:-70361855 | None:intergenic |
| AGCTTCACGACGAATTGCCG+CGG | 0.679867 | 5.3:-70360847 | None:intergenic |
| GCATTGTCACTGAAATGTGA+AGG | 0.683781 | 5.3:-70363424 | None:intergenic |
| GTGGAGGAGATAATACGCGA+CGG | 0.700195 | 5.3:-70360481 | None:intergenic |
| AAAGCTATATATGCTTCGGG+TGG | 0.713518 | 5.3:+70361080 | MS.gene37846:CDS |
| AGGTATAGTACCCTCCACGA+CGG | 0.721388 | 5.3:-70360784 | None:intergenic |
| TCCCTCAATCCAATTAACTG+CGG | 0.724361 | 5.3:-70363138 | None:intergenic |
| TGTGAAGGGTGCAAGCAAGG+AGG | 0.729907 | 5.3:+70363613 | MS.gene37846:CDS |
| GAAGAAGGTATTGAAGACCA+AGG | 0.742555 | 5.3:+70363208 | MS.gene37846:CDS |
| TGGTGATGACGGTGTCATCG+AGG | 0.750800 | 5.3:-70360668 | None:intergenic |
| GAAGGTATTGAAGACCAAGG+TGG | 0.762853 | 5.3:+70363211 | MS.gene37846:CDS |
| GTAGTACGGGTGATGCCATG+GGG | 0.765847 | 5.3:+70362336 | MS.gene37846:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGATAATTTAATGTAAT+TGG | - | chr5.3:70362609-70362628 | None:intergenic | 10.0% |
| !! | AACTAGAAATGTAAATAAAT+TGG | - | chr5.3:70362872-70362891 | None:intergenic | 15.0% |
| !! | CAAAAAAACATATAAAACTT+AGG | - | chr5.3:70363522-70363541 | None:intergenic | 15.0% |
| !! | TAAGATTAAAATAAACTGTA+GGG | - | chr5.3:70363473-70363492 | None:intergenic | 15.0% |
| !! | TTAAGATTAAAATAAACTGT+AGG | - | chr5.3:70363474-70363493 | None:intergenic | 15.0% |
| !!! | ATTTATTTACATTTCTAGTT+TGG | + | chr5.3:70362872-70362891 | MS.gene37846:intron | 15.0% |
| !!! | TTTTGAATTTTGATTTTGAA+TGG | + | chr5.3:70361254-70361273 | MS.gene37846:intron | 15.0% |
| !! | AAAATCCTATTGACAATAAT+AGG | + | chr5.3:70361975-70361994 | MS.gene37846:intron | 20.0% |
| !! | AATTTGAGTAAAGAAAATAG+AGG | + | chr5.3:70362148-70362167 | MS.gene37846:intron | 20.0% |
| !! | ACAAGTGTAAATAATGTAAT+TGG | - | chr5.3:70362568-70362587 | None:intergenic | 20.0% |
| !! | ATAAAAGATGGATAAAATCA+AGG | - | chr5.3:70362642-70362661 | None:intergenic | 20.0% |
| !! | ATTCCATAAATTCAATACAT+TGG | + | chr5.3:70362697-70362716 | MS.gene37846:intron | 20.0% |
| !! | CTTATTATTGGTATATGAAA+GGG | + | chr5.3:70361504-70361523 | MS.gene37846:intron | 20.0% |
| !! | TAATAGTGAAGTGAAATTAT+TGG | + | chr5.3:70361612-70361631 | MS.gene37846:intron | 20.0% |
| !! | TAGAAATGTAAATAAATTGG+TGG | - | chr5.3:70362869-70362888 | None:intergenic | 20.0% |
| !! | TCTTATTATTGGTATATGAA+AGG | + | chr5.3:70361503-70361522 | MS.gene37846:intron | 20.0% |
| !! | TGAAATTATTGGTATTTGAA+AGG | + | chr5.3:70361623-70361642 | MS.gene37846:intron | 20.0% |
| !! | TGAAATTGAATATGGTTTAT+TGG | + | chr5.3:70362178-70362197 | MS.gene37846:intron | 20.0% |
| !!! | AATAATTTTAATGGGAACAT+TGG | + | chr5.3:70363046-70363065 | MS.gene37846:intron | 20.0% |
| !!! | CATGCCAAAATAATTTTAAT+GGG | + | chr5.3:70363038-70363057 | MS.gene37846:intron | 20.0% |
| !!! | TAATAATTTATGGTGAGTTT+TGG | + | chr5.3:70362217-70362236 | MS.gene37846:intron | 20.0% |
| !!! | TATCCATCTTTTATTGTTAT+AGG | + | chr5.3:70362648-70362667 | MS.gene37846:intron | 20.0% |
| !!! | TGTTCCCATTAAAATTATTT+TGG | - | chr5.3:70363045-70363064 | None:intergenic | 20.0% |
| !!! | TTCTTTAGGAAATTATTGTT+CGG | + | chr5.3:70363103-70363122 | MS.gene37846:intron | 20.0% |
| !!! | TTTTCCAATTTAATAGCTTT+AGG | + | chr5.3:70363496-70363515 | MS.gene37846:intron | 20.0% |
| ! | AATAAATGCTAGAACACATT+AGG | - | chr5.3:70362905-70362924 | None:intergenic | 25.0% |
| ! | AATTATGAAAATCTTGCATG+TGG | + | chr5.3:70361571-70361590 | MS.gene37846:intron | 25.0% |
| ! | ACAAATAAGGTAATTCAGAT+TGG | + | chr5.3:70361479-70361498 | MS.gene37846:intron | 25.0% |
| ! | ACACCAATGTATTGAATTTA+TGG | - | chr5.3:70362703-70362722 | None:intergenic | 25.0% |
| ! | ACACCTATAACAATAAAAGA+TGG | - | chr5.3:70362654-70362673 | None:intergenic | 25.0% |
| ! | ACGTAAATTAAGAGAGTAAA+TGG | - | chr5.3:70362027-70362046 | None:intergenic | 25.0% |
| ! | ACTATCTTAATCTCCTTATT+TGG | + | chr5.3:70362992-70363011 | MS.gene37846:intron | 25.0% |
| ! | AGGAATCAAATAACCAAATA+AGG | - | chr5.3:70363008-70363027 | None:intergenic | 25.0% |
| ! | ATTATGAAAATCTTGCATGT+GGG | + | chr5.3:70361572-70361591 | MS.gene37846:intron | 25.0% |
| ! | GCTTATGAAAACAACTTATA+AGG | - | chr5.3:70361376-70361395 | None:intergenic | 25.0% |
| ! | TATGAGATTTACATGTAGTA+CGG | + | chr5.3:70362322-70362341 | MS.gene37846:CDS | 25.0% |
| ! | TTTAAATATCTCCACATTTG+TGG | - | chr5.3:70361759-70361778 | None:intergenic | 25.0% |
| !! | GAAATGAATATAGTTCTGTT+TGG | + | chr5.3:70361290-70361309 | MS.gene37846:intron | 25.0% |
| !! | GCATGCCAAAATAATTTTAA+TGG | + | chr5.3:70363037-70363056 | MS.gene37846:intron | 25.0% |
| !! | TATAGTTCTGTTTGGATTAT+CGG | + | chr5.3:70361298-70361317 | MS.gene37846:intron | 25.0% |
| !! | TATTGGTATTTGAAAGGTAT+TGG | + | chr5.3:70361629-70361648 | MS.gene37846:intron | 25.0% |
| !! | TTGATTACGAAGCAATTTTA+GGG | + | chr5.3:70360919-70360938 | MS.gene37846:CDS | 25.0% |
| !! | TTTGATTACGAAGCAATTTT+AGG | + | chr5.3:70360918-70360937 | MS.gene37846:CDS | 25.0% |
| !!! | ATATGTTTTTTTGAACTCTC+AGG | + | chr5.3:70363529-70363548 | MS.gene37846:intron | 25.0% |
| !!! | GATTGGTTTGAAATTGAATA+TGG | + | chr5.3:70362170-70362189 | MS.gene37846:intron | 25.0% |
| !!! | TTAACTTGTTATCGTGAATT+GGG | + | chr5.3:70361806-70361825 | MS.gene37846:intron | 25.0% |
| !!! | TTATCTGCTTTTTGAGAAAA+TGG | + | chr5.3:70362791-70362810 | MS.gene37846:intron | 25.0% |
| !!! | TTTAACTTGTTATCGTGAAT+TGG | + | chr5.3:70361805-70361824 | MS.gene37846:intron | 25.0% |
| AAAATGGTTATGCAAAAGCA+TGG | + | chr5.3:70362807-70362826 | MS.gene37846:intron | 30.0% | |
| AGAAACAATGTTACTAGCAT+GGG | - | chr5.3:70363312-70363331 | None:intergenic | 30.0% | |
| AGCAATTATCAAAGAAGATG+TGG | + | chr5.3:70363184-70363203 | MS.gene37846:CDS | 30.0% | |
| ATGAGATTTACATGTAGTAC+GGG | + | chr5.3:70362323-70362342 | MS.gene37846:CDS | 30.0% | |
| ATGATCTGTTGTATTTCATG+TGG | - | chr5.3:70363745-70363764 | None:intergenic | 30.0% | |
| ATTTGAATATACGGTTCCAA+TGG | + | chr5.3:70361013-70361032 | MS.gene37846:CDS | 30.0% | |
| CACTTCACTATTAGAAACAT+TGG | - | chr5.3:70361605-70361624 | None:intergenic | 30.0% | |
| CTACACCTATTATTGTCAAT+AGG | - | chr5.3:70361983-70362002 | None:intergenic | 30.0% | |
| CTATTGACAATAATAGGTGT+AGG | + | chr5.3:70361981-70362000 | MS.gene37846:intron | 30.0% | |
| CTTCTAAACAGTGTTAATGT+TGG | + | chr5.3:70361447-70361466 | MS.gene37846:intron | 30.0% | |
| GAGTAAAGAAAATAGAGGAT+TGG | + | chr5.3:70362153-70362172 | MS.gene37846:intron | 30.0% | |
| GATAAAATCAAGGATGACAT+TGG | - | chr5.3:70362632-70362651 | None:intergenic | 30.0% | |
| GTGTAAAGCTATATATGCTT+CGG | + | chr5.3:70361076-70361095 | MS.gene37846:CDS | 30.0% | |
| TAGGCCTAAAGCTATTAAAT+TGG | - | chr5.3:70363503-70363522 | None:intergenic | 30.0% | |
| TCCTTTGAATTCTGATACAT+TGG | + | chr5.3:70361202-70361221 | MS.gene37846:intron | 30.0% | |
| TCGTAATCAAATCCTTCTAA+TGG | - | chr5.3:70360909-70360928 | None:intergenic | 30.0% | |
| TGTAAAGCTATATATGCTTC+GGG | + | chr5.3:70361077-70361096 | MS.gene37846:CDS | 30.0% | |
| TTCAAAAGATGCAAGTTAAC+TGG | - | chr5.3:70362966-70362985 | None:intergenic | 30.0% | |
| TTCCATCATTGTTATGCAAT+GGG | - | chr5.3:70363384-70363403 | None:intergenic | 30.0% | |
| TTGGTTGATTAGCACAAATA+AGG | + | chr5.3:70361466-70361485 | MS.gene37846:intron | 30.0% | |
| ! | ACAAACAACCATCACATTTT+TGG | - | chr5.3:70363073-70363092 | None:intergenic | 30.0% |
| ! | ACTTGTTTCTTTCATGAAAG+TGG | + | chr5.3:70362582-70362601 | MS.gene37846:intron | 30.0% |
| ! | AGGTGTTATATGATTTGAAC+TGG | + | chr5.3:70362668-70362687 | MS.gene37846:intron | 30.0% |
| ! | GTTGGATGGATTTGAATATA+CGG | + | chr5.3:70361004-70361023 | MS.gene37846:CDS | 30.0% |
| ! | TTCAGATTGGCTCTTATTAT+TGG | + | chr5.3:70361492-70361511 | MS.gene37846:intron | 30.0% |
| ! | TTCTCAGTTGAAGTTTTTCT+TGG | + | chr5.3:70361175-70361194 | MS.gene37846:intron | 30.0% |
| !! | TTGTACTGACTTGATTCTTT+AGG | + | chr5.3:70363089-70363108 | MS.gene37846:intron | 30.0% |
| AAATTCCATCCAAATGGCAA+TGG | - | chr5.3:70362454-70362473 | None:intergenic | 35.0% | |
| ACAAGGAAATTCCATCCAAA+TGG | - | chr5.3:70362460-70362479 | None:intergenic | 35.0% | |
| ACATTGGACCAAAAATGTGA+TGG | + | chr5.3:70363062-70363081 | MS.gene37846:intron | 35.0% | |
| AGGTAATTTCCATTGCCATT+TGG | + | chr5.3:70362442-70362461 | MS.gene37846:intron | 35.0% | |
| ATCTACCTTCTAGGTTTCTT+CGG | + | chr5.3:70360594-70360613 | MS.gene37846:CDS | 35.0% | |
| ATCTTCCTCTGAACATAATG+AGG | - | chr5.3:70360748-70360767 | None:intergenic | 35.0% | |
| ATGGATGTTATTGGCATATC+AGG | + | chr5.3:70362422-70362441 | MS.gene37846:CDS | 35.0% | |
| CAGAAACAATGTTACTAGCA+TGG | - | chr5.3:70363313-70363332 | None:intergenic | 35.0% | |
| CAGTAAAAACTTTGATGTCG+TGG | + | chr5.3:70361924-70361943 | MS.gene37846:intron | 35.0% | |
| CGATGTATTGTGAAGAATTG+TGG | + | chr5.3:70361709-70361728 | MS.gene37846:intron | 35.0% | |
| CTTCCATCATTGTTATGCAA+TGG | - | chr5.3:70363385-70363404 | None:intergenic | 35.0% | |
| GCAGTAGAAAATCTAACAAC+AGG | - | chr5.3:70361146-70361165 | None:intergenic | 35.0% | |
| GCCAATGTATCAGAATTCAA+AGG | - | chr5.3:70361206-70361225 | None:intergenic | 35.0% | |
| GCTTAACTAGAGAAGAAACA+AGG | - | chr5.3:70362477-70362496 | None:intergenic | 35.0% | |
| GGAATTTGAATATACCCTAC+CGG | - | chr5.3:70360960-70360979 | None:intergenic | 35.0% | |
| GGTAGGGTATATTCAAATTC+CGG | + | chr5.3:70360959-70360978 | MS.gene37846:CDS | 35.0% | |
| TCAAATCCATCCAACAACAA+TGG | - | chr5.3:70360999-70361018 | None:intergenic | 35.0% | |
| TCTTCCTCTGAACATAATGA+GGG | - | chr5.3:70360747-70360766 | None:intergenic | 35.0% | |
| TGAAGCACAAGCAAAACAAA+TGG | - | chr5.3:70362519-70362538 | None:intergenic | 35.0% | |
| TGGAAGACTAAATACCAAAC+AGG | - | chr5.3:70362946-70362965 | None:intergenic | 35.0% | |
| TGGTTGCTAGTACAAATAGA+GGG | + | chr5.3:70361054-70361073 | MS.gene37846:CDS | 35.0% | |
| TTCCCATTGCATAACAATGA+TGG | + | chr5.3:70363379-70363398 | MS.gene37846:CDS | 35.0% | |
| TTGACCTGTGGCTATAAAAA+TGG | - | chr5.3:70363336-70363355 | None:intergenic | 35.0% | |
| TTGGAAGGTTTACCATTAGA+AGG | + | chr5.3:70360894-70360913 | MS.gene37846:CDS | 35.0% | |
| TTGGTTGCTAGTACAAATAG+AGG | + | chr5.3:70361053-70361072 | MS.gene37846:CDS | 35.0% | |
| ! | AATTTCCATTGCCATTTGGA+TGG | + | chr5.3:70362446-70362465 | MS.gene37846:intron | 35.0% |
| ! | GAACTTTCAACATTTTGAGC+TGG | - | chr5.3:70363362-70363381 | None:intergenic | 35.0% |
| ! | TCAGTTGAAGTTTTTCTTGG+AGG | + | chr5.3:70361178-70361197 | MS.gene37846:intron | 35.0% |
| ! | TTTTGGCATGCATAGATTAC+AGG | - | chr5.3:70363028-70363047 | None:intergenic | 35.0% |
| !!! | GTTTTTTTGAACTCTCAGGT+GGG | + | chr5.3:70363533-70363552 | MS.gene37846:intron | 35.0% |
| !!! | TGTTTTTTTGAACTCTCAGG+TGG | + | chr5.3:70363532-70363551 | MS.gene37846:intron | 35.0% |
| AAAGCTATATATGCTTCGGG+TGG | + | chr5.3:70361080-70361099 | MS.gene37846:CDS | 40.0% | |
| AACATGCTCAAAAACCTTGC+TGG | + | chr5.3:70363251-70363270 | MS.gene37846:CDS | 40.0% | |
| AAGGTCTCTCCCATCATTTA+CGG | - | chr5.3:70363408-70363427 | None:intergenic | 40.0% | |
| AATAGGTGTAGGTGTAGATG+TGG | + | chr5.3:70361992-70362011 | MS.gene37846:intron | 40.0% | |
| AATTGGACCACTTCCATGAA+AGG | - | chr5.3:70362551-70362570 | None:intergenic | 40.0% | |
| ACATCAGGAAGATCTTTGGA+AGG | + | chr5.3:70360879-70360898 | MS.gene37846:CDS | 40.0% | |
| ACGAACATCAGGAAGATCTT+TGG | + | chr5.3:70360875-70360894 | MS.gene37846:CDS | 40.0% | |
| ACGCGGGAAATGAATCTTTA+TGG | - | chr5.3:70361841-70361860 | None:intergenic | 40.0% | |
| AGGGTATATTCAAATTCCGG+TGG | + | chr5.3:70360962-70360981 | MS.gene37846:CDS | 40.0% | |
| ATGAAAGGGATAGCTTGGTT+GGG | + | chr5.3:70361518-70361537 | MS.gene37846:intron | 40.0% | |
| ATGCCAATAACATCCATGTC+AGG | - | chr5.3:70362419-70362438 | None:intergenic | 40.0% | |
| ATTGGACCACTTCCATGAAA+GGG | - | chr5.3:70362550-70362569 | None:intergenic | 40.0% | |
| CAAAGAAGATGTGGTGAAGA+AGG | + | chr5.3:70363193-70363212 | MS.gene37846:CDS | 40.0% | |
| CAATACCGAAGAAACCTAGA+AGG | - | chr5.3:70360602-70360621 | None:intergenic | 40.0% | |
| CCATGTTGTAGTTGTAACTG+AGG | - | chr5.3:70361901-70361920 | None:intergenic | 40.0% | |
| CCTCAGTTACAACTACAACA+TGG | + | chr5.3:70361898-70361917 | MS.gene37846:CDS | 40.0% | |
| GAAGCTTTACAACGAACATC+AGG | + | chr5.3:70360864-70360883 | MS.gene37846:CDS | 40.0% | |
| GCATTGTCACTGAAATGTGA+AGG | - | chr5.3:70363427-70363446 | None:intergenic | 40.0% | |
| GCTTCGTTTATCTACCTTCT+AGG | + | chr5.3:70360585-70360604 | MS.gene37846:CDS | 40.0% | |
| GGGTATATTCAAATTCCGGT+GGG | + | chr5.3:70360963-70360982 | MS.gene37846:CDS | 40.0% | |
| GGTATATGAAAGGGATAGCT+TGG | + | chr5.3:70361513-70361532 | MS.gene37846:intron | 40.0% | |
| GTAGATAAACGAAGCGATGA+GGG | - | chr5.3:70360580-70360599 | None:intergenic | 40.0% | |
| GTGAAATTGACGACATGAAG+AGG | - | chr5.3:70360537-70360556 | None:intergenic | 40.0% | |
| TAAAACAGCTCCAGCAACAA+TGG | - | chr5.3:70363669-70363688 | None:intergenic | 40.0% | |
| TAATGTCTGCCATTGCTTCA+GGG | + | chr5.3:70363705-70363724 | MS.gene37846:CDS | 40.0% | |
| TATGAAAGGGATAGCTTGGT+TGG | + | chr5.3:70361517-70361536 | MS.gene37846:intron | 40.0% | |
| TCCCTCAATCCAATTAACTG+CGG | - | chr5.3:70363141-70363160 | None:intergenic | 40.0% | |
| TCGAAATGATTTCCCTGACA+TGG | + | chr5.3:70362403-70362422 | MS.gene37846:CDS | 40.0% | |
| TCTGAACATAATGAGGGTTC+AGG | - | chr5.3:70360741-70360760 | None:intergenic | 40.0% | |
| TGAACCCTCATTATGTTCAG+AGG | + | chr5.3:70360740-70360759 | MS.gene37846:CDS | 40.0% | |
| TGATGGAAGCCGTAAATGAT+GGG | + | chr5.3:70363396-70363415 | MS.gene37846:CDS | 40.0% | |
| TGCAAAATCACCTCAATGGA+TGG | - | chr5.3:70363449-70363468 | None:intergenic | 40.0% | |
| TGCCAATAACATCCATGTCA+GGG | - | chr5.3:70362418-70362437 | None:intergenic | 40.0% | |
| TGGTATTCATGACATCATGC+AGG | - | chr5.3:70362499-70362518 | None:intergenic | 40.0% | |
| TGTCAGGGAAATCATTTCGA+AGG | - | chr5.3:70362403-70362422 | None:intergenic | 40.0% | |
| TTCAATTGTAAACTCCGTCG+TGG | + | chr5.3:70360770-70360789 | MS.gene37846:CDS | 40.0% | |
| TTCACACATTGTCCCTTTCA+TGG | + | chr5.3:70362535-70362554 | MS.gene37846:intron | 40.0% | |
| TTCCCTGACATGGATGTTAT+TGG | + | chr5.3:70362413-70362432 | MS.gene37846:CDS | 40.0% | |
| TTGTCGTGTCAAATCCTGTT+TGG | + | chr5.3:70362929-70362948 | MS.gene37846:intron | 40.0% | |
| ! | ATGATGGAAGCCGTAAATGA+TGG | + | chr5.3:70363395-70363414 | MS.gene37846:CDS | 40.0% |
| !! | GAAGAAGGTATTGAAGACCA+AGG | + | chr5.3:70363208-70363227 | MS.gene37846:CDS | 40.0% |
| !! | TGTTTGTTTGCTGTCGTTTC+AGG | + | chr5.3:70362240-70362259 | MS.gene37846:intron | 40.0% |
| !! | TTGAACATGCTTGGTGTGAA+GGG | + | chr5.3:70363599-70363618 | MS.gene37846:CDS | 40.0% |
| !!! | CATTGGCTGTTGTTTTCAAC+AGG | + | chr5.3:70361219-70361238 | MS.gene37846:intron | 40.0% |
| !!! | TCTGCCATTTTTATAGCCAC+AGG | + | chr5.3:70363329-70363348 | MS.gene37846:CDS | 40.0% |
| AAGAGTCTCGAGTTTGATCC+TGG | - | chr5.3:70363641-70363660 | None:intergenic | 45.0% | |
| AAGATTCATTTCCCGCGTTC+TGG | + | chr5.3:70361843-70361862 | MS.gene37846:intron | 45.0% | |
| AATTGTAAACTCCGTCGTGG+AGG | + | chr5.3:70360773-70360792 | MS.gene37846:CDS | 45.0% | |
| ACACTGAATACCTAGCAACC+TGG | - | chr5.3:70362279-70362298 | None:intergenic | 45.0% | |
| ACATAATGAGGGTTCAGGTG+AGG | - | chr5.3:70360736-70360755 | None:intergenic | 45.0% | |
| AGAAACCTGCCGCAGTTAAT+TGG | + | chr5.3:70363129-70363148 | MS.gene37846:CDS | 45.0% | |
| AGGATCAAACTCGAGACTCT+TGG | + | chr5.3:70363640-70363659 | MS.gene37846:CDS | 45.0% | |
| AGTAGATTTGCCAGGTTGCT+AGG | + | chr5.3:70362266-70362285 | MS.gene37846:CDS | 45.0% | |
| AGTGACAATGCCATCCATTG+AGG | + | chr5.3:70363436-70363455 | MS.gene37846:CDS | 45.0% | |
| AGTGTTGTGAAATGCCGGTA+GGG | + | chr5.3:70360943-70360962 | MS.gene37846:CDS | 45.0% | |
| ATTGACGACATGAAGAGGAG+TGG | - | chr5.3:70360532-70360551 | None:intergenic | 45.0% | |
| ATTGTAAACTCCGTCGTGGA+GGG | + | chr5.3:70360774-70360793 | MS.gene37846:CDS | 45.0% | |
| CACATTTGTGGTCACAACTG+AGG | - | chr5.3:70361747-70361766 | None:intergenic | 45.0% | |
| CATTGTCCCTTTCATGGAAG+TGG | + | chr5.3:70362541-70362560 | MS.gene37846:intron | 45.0% | |
| CGTATTATCTCCTCCACAGA+TGG | + | chr5.3:70360487-70360506 | MS.gene37846:CDS | 45.0% | |
| CTAATGTCTGCCATTGCTTC+AGG | + | chr5.3:70363704-70363723 | MS.gene37846:CDS | 45.0% | |
| CTCAGTTGTGACCACAAATG+TGG | + | chr5.3:70361745-70361764 | MS.gene37846:intron | 45.0% | |
| CTTCGCAATATACCAGAACG+CGG | - | chr5.3:70361858-70361877 | None:intergenic | 45.0% | |
| GATGAACATGGTCTCCAAAG+GGG | + | chr5.3:70362358-70362377 | MS.gene37846:CDS | 45.0% | |
| GCCGCAGTTAATTGGATTGA+GGG | + | chr5.3:70363137-70363156 | MS.gene37846:CDS | 45.0% | |
| GCTAGGTATTCAGTGTGCTA+TGG | + | chr5.3:70362283-70362302 | MS.gene37846:CDS | 45.0% | |
| GGATGAACATGGTCTCCAAA+GGG | + | chr5.3:70362357-70362376 | MS.gene37846:CDS | 45.0% | |
| GGGATGCAAAATCACCTCAA+TGG | - | chr5.3:70363453-70363472 | None:intergenic | 45.0% | |
| GGTAGATAAACGAAGCGATG+AGG | - | chr5.3:70360581-70360600 | None:intergenic | 45.0% | |
| GTATTCAGTGTGCTATGGCT+GGG | + | chr5.3:70362288-70362307 | MS.gene37846:CDS | 45.0% | |
| GTTAATTGGATTGAGGGACG+CGG | + | chr5.3:70363143-70363162 | MS.gene37846:CDS | 45.0% | |
| TATTCAAATTCCGGTGGGTG+TGG | + | chr5.3:70360968-70360987 | MS.gene37846:CDS | 45.0% | |
| TCAATCCAATTAACTGCGGC+AGG | - | chr5.3:70363137-70363156 | None:intergenic | 45.0% | |
| TCTGCTTGCTTGAACATGCT+TGG | + | chr5.3:70363590-70363609 | MS.gene37846:CDS | 45.0% | |
| TGCCGCAGTTAATTGGATTG+AGG | + | chr5.3:70363136-70363155 | MS.gene37846:CDS | 45.0% | |
| TTAATTGGATTGAGGGACGC+GGG | + | chr5.3:70363144-70363163 | MS.gene37846:CDS | 45.0% | |
| TTCCAATGGCGACTACAGAA+GGG | + | chr5.3:70361027-70361046 | MS.gene37846:CDS | 45.0% | |
| TTCGCAATATACCAGAACGC+GGG | - | chr5.3:70361857-70361876 | None:intergenic | 45.0% | |
| ! | ATTTGAGACGGTGGGAATGA+GGG | - | chr5.3:70360371-70360390 | None:intergenic | 45.0% |
| ! | GAAGAAGAGCGTGAAGAAGA+TGG | - | chr5.3:70360460-70360479 | None:intergenic | 45.0% |
| ! | GAGCATGTTTAGCTCCACTA+GGG | - | chr5.3:70363240-70363259 | None:intergenic | 45.0% |
| ! | GTTCAGGTGAGGTGATTTTC+CGG | - | chr5.3:70360725-70360744 | None:intergenic | 45.0% |
| ! | TGAGCATGTTTAGCTCCACT+AGG | - | chr5.3:70363241-70363260 | None:intergenic | 45.0% |
| !! | CTTGAACATGCTTGGTGTGA+AGG | + | chr5.3:70363598-70363617 | MS.gene37846:CDS | 45.0% |
| !! | GAAGGTATTGAAGACCAAGG+TGG | + | chr5.3:70363211-70363230 | MS.gene37846:CDS | 45.0% |
| !! | TGAAGAAGATGGTGTTGGTG+AGG | - | chr5.3:70360449-70360468 | None:intergenic | 45.0% |
| !! | ATACAAAAAATAATAATTTA+TGG | + | chr5.3:70362207-70362226 | MS.gene37846:intron | 5.0% |
| AACTCTCAGGTGGGTACAGT+AGG | + | chr5.3:70363542-70363561 | MS.gene37846:intron | 50.0% | |
| AAGAACGTTCTGCACCCCTT+TGG | - | chr5.3:70362375-70362394 | None:intergenic | 50.0% | |
| AAGGGATAGCTTGGTTGGGT+TGG | + | chr5.3:70361522-70361541 | MS.gene37846:intron | 50.0% | |
| ACGCGCTTCTCATGATGGTT+GGG | + | chr5.3:70360644-70360663 | MS.gene37846:CDS | 50.0% | |
| ACTCTCAGGTGGGTACAGTA+GGG | + | chr5.3:70363543-70363562 | MS.gene37846:intron | 50.0% | |
| AGCGATGAGGGAAACAATGG+CGG | - | chr5.3:70360568-70360587 | None:intergenic | 50.0% | |
| AGGGATAGCTTGGTTGGGTT+GGG | + | chr5.3:70361523-70361542 | MS.gene37846:intron | 50.0% | |
| AGGGCAGTGTTGTGAAATGC+CGG | + | chr5.3:70360938-70360957 | MS.gene37846:CDS | 50.0% | |
| AGGTATAGTACCCTCCACGA+CGG | - | chr5.3:70360787-70360806 | None:intergenic | 50.0% | |
| ATGTAGTACGGGTGATGCCA+TGG | + | chr5.3:70362334-70362353 | MS.gene37846:CDS | 50.0% | |
| CAGTGTTGTGAAATGCCGGT+AGG | + | chr5.3:70360942-70360961 | MS.gene37846:CDS | 50.0% | |
| CATGAAGAGGAGTGGAGCTA+CGG | - | chr5.3:70360524-70360543 | None:intergenic | 50.0% | |
| CGAAGCGATGAGGGAAACAA+TGG | - | chr5.3:70360571-70360590 | None:intergenic | 50.0% | |
| CTCTTGGCAACCATTGTTGC+TGG | + | chr5.3:70363656-70363675 | MS.gene37846:CDS | 50.0% | |
| CTTCCTACTCACTCGAATCG+CGG | + | chr5.3:70360805-70360824 | MS.gene37846:CDS | 50.0% | |
| GAGCGTGAAGAAGATGGTGT+TGG | - | chr5.3:70360454-70360473 | None:intergenic | 50.0% | |
| GAGGGGAACGTGATTTGAGA+CGG | - | chr5.3:70360383-70360402 | None:intergenic | 50.0% | |
| GGGATGAACATGGTCTCCAA+AGG | + | chr5.3:70362356-70362375 | MS.gene37846:CDS | 50.0% | |
| GGTATTCAGTGTGCTATGGC+TGG | + | chr5.3:70362287-70362306 | MS.gene37846:CDS | 50.0% | |
| GTGGAGGAGATAATACGCGA+CGG | - | chr5.3:70360484-70360503 | None:intergenic | 50.0% | |
| GTTCCAATGGCGACTACAGA+AGG | + | chr5.3:70361026-70361045 | MS.gene37846:CDS | 50.0% | |
| TCAGGTCGAGTAGATTTGCC+AGG | + | chr5.3:70362258-70362277 | MS.gene37846:intron | 50.0% | |
| TGATGCCATGGGGATGAACA+TGG | + | chr5.3:70362346-70362365 | MS.gene37846:CDS | 50.0% | |
| TGTAGTACGGGTGATGCCAT+GGG | + | chr5.3:70362335-70362354 | MS.gene37846:CDS | 50.0% | |
| TGTGGCAGGACCATTGTTGT+TGG | + | chr5.3:70360986-70361005 | MS.gene37846:CDS | 50.0% | |
| TTGAGCTGGATCTTGACCTG+TGG | - | chr5.3:70363348-70363367 | None:intergenic | 50.0% | |
| ! | GACTAGTTGCCCTGAAGCAA+TGG | - | chr5.3:70363717-70363736 | None:intergenic | 50.0% |
| ! | GATTTGAGACGGTGGGAATG+AGG | - | chr5.3:70360372-70360391 | None:intergenic | 50.0% |
| ! | GATTTTCCGGAGAGGCTGAT+TGG | - | chr5.3:70360712-70360731 | None:intergenic | 50.0% |
| ! | GCAGGACCATTGTTGTTGGA+TGG | + | chr5.3:70360990-70361009 | MS.gene37846:CDS | 50.0% |
| ! | GCATCAGAGGCTTTTGGTGA+TGG | - | chr5.3:70360408-70360427 | None:intergenic | 50.0% |
| ! | GGAACGTGATTTGAGACGGT+GGG | - | chr5.3:70360379-70360398 | None:intergenic | 50.0% |
| !! | ATGGTGTTGGTGAGGTAGAG+AGG | - | chr5.3:70360441-70360460 | None:intergenic | 50.0% |
| !! | TGGTGTTGGTGAGGTAGAGA+GGG | - | chr5.3:70360440-70360459 | None:intergenic | 50.0% |
| !!! | AGGCTTTTGGTGATGGTGGA+GGG | - | chr5.3:70360401-70360420 | None:intergenic | 50.0% |
| !!! | GTTGCTGGAGCTGTTTTAGC+TGG | + | chr5.3:70363671-70363690 | MS.gene37846:CDS | 50.0% |
| !!! | TCAGAGGCTTTTGGTGATGG+TGG | - | chr5.3:70360405-70360424 | None:intergenic | 50.0% |
| AGCTTCACGACGAATTGCCG+CGG | - | chr5.3:70360850-70360869 | None:intergenic | 55.0% | |
| CACCCTTCTGTAGTCGCCAT+TGG | - | chr5.3:70361032-70361051 | None:intergenic | 55.0% | |
| CACGCGCTTCTCATGATGGT+TGG | + | chr5.3:70360643-70360662 | MS.gene37846:CDS | 55.0% | |
| CAGCAACAGCAGAACCAGCA+AGG | - | chr5.3:70363268-70363287 | None:intergenic | 55.0% | |
| CGCGATTCGAGTGAGTAGGA+AGG | - | chr5.3:70360807-70360826 | None:intergenic | 55.0% | |
| CTCTCAGGTGGGTACAGTAG+GGG | + | chr5.3:70363544-70363563 | MS.gene37846:intron | 55.0% | |
| GCAACACGCGCTTCTCATGA+TGG | + | chr5.3:70360639-70360658 | MS.gene37846:CDS | 55.0% | |
| GGAAACAATGGCGGCGAGTT+CGG | - | chr5.3:70360559-70360578 | None:intergenic | 55.0% | |
| GGAGACCATGTTCATCCCCA+TGG | - | chr5.3:70362354-70362373 | None:intergenic | 55.0% | |
| GGATCTTGTCACGCCATCTG+TGG | - | chr5.3:70360503-70360522 | None:intergenic | 55.0% | |
| GTAGTACGGGTGATGCCATG+GGG | + | chr5.3:70362336-70362355 | MS.gene37846:CDS | 55.0% | |
| TACTCACTCGAATCGCGGCT+CGG | + | chr5.3:70360810-70360829 | MS.gene37846:CDS | 55.0% | |
| TCTCAGGTGGGTACAGTAGG+GGG | + | chr5.3:70363545-70363564 | MS.gene37846:intron | 55.0% | |
| TCTGCTGTTGCTGGCACTCT+TGG | + | chr5.3:70363275-70363294 | MS.gene37846:CDS | 55.0% | |
| TCTTGTCACGCCATCTGTGG+AGG | - | chr5.3:70360500-70360519 | None:intergenic | 55.0% | |
| TGGTGAGGTAGAGAGGGAGA+GGG | - | chr5.3:70360434-70360453 | None:intergenic | 55.0% | |
| TTGGTGAGGTAGAGAGGGAG+AGG | - | chr5.3:70360435-70360454 | None:intergenic | 55.0% | |
| TTTCCGGAGAGGCTGATTGG+CGG | - | chr5.3:70360709-70360728 | None:intergenic | 55.0% | |
| ! | GGGAACGTGATTTGAGACGG+TGG | - | chr5.3:70360380-70360399 | None:intergenic | 55.0% |
| ! | GGTGAGGTGATTTTCCGGAG+AGG | - | chr5.3:70360720-70360739 | None:intergenic | 55.0% |
| ! | GTTGGTCGTGGTGGTGATGA+CGG | - | chr5.3:70360682-70360701 | None:intergenic | 55.0% |
| ! | TGGTGTGAAGGGTGCAAGCA+AGG | + | chr5.3:70363610-70363629 | MS.gene37846:CDS | 55.0% |
| ! | TGTGAAGGGTGCAAGCAAGG+AGG | + | chr5.3:70363613-70363632 | MS.gene37846:CDS | 55.0% |
| !! | CTTGCTGGTTCTGCTGTTGC+TGG | + | chr5.3:70363266-70363285 | MS.gene37846:CDS | 55.0% |
| !! | GGCGACTACAGAAGGGTGTT+TGG | + | chr5.3:70361034-70361053 | MS.gene37846:CDS | 55.0% |
| !! | TGGTGATGACGGTGTCATCG+AGG | - | chr5.3:70360671-70360690 | None:intergenic | 55.0% |
| !!! | GAGGCTTTTGGTGATGGTGG+AGG | - | chr5.3:70360402-70360421 | None:intergenic | 55.0% |
| !!! | GGCTTTTGGTGATGGTGGAG+GGG | - | chr5.3:70360400-70360419 | None:intergenic | 55.0% |
| !!! | GGGAGAGCATCAGAGGCTTT+TGG | - | chr5.3:70360414-70360433 | None:intergenic | 55.0% |
| AATGGTCCTGCCACACCCAC+CGG | - | chr5.3:70360981-70361000 | None:intergenic | 60.0% | |
| AGGCTGATTGGCGGTGGTGT+TGG | - | chr5.3:70360700-70360719 | None:intergenic | 60.0% | |
| AGGTGGGTACAGTAGGGGGT+GGG | + | chr5.3:70363549-70363568 | MS.gene37846:intron | 60.0% | |
| CAAATTCCGGTGGGTGTGGC+AGG | + | chr5.3:70360972-70360991 | MS.gene37846:CDS | 60.0% | |
| CGGAGATTGTTTCCGAGCCG+CGG | + | chr5.3:70360830-70360849 | MS.gene37846:CDS | 60.0% | |
| GAGACGGTGGGAATGAGGGT+TGG | - | chr5.3:70360367-70360386 | None:intergenic | 60.0% | |
| GAGCCGCGATTCGAGTGAGT+AGG | - | chr5.3:70360811-70360830 | None:intergenic | 60.0% | |
| GCTGTTGCTGGCACTCTTGG+CGG | + | chr5.3:70363278-70363297 | MS.gene37846:CDS | 60.0% | |
| GGTGCAAGCAAGGAGGAACC+AGG | + | chr5.3:70363620-70363639 | MS.gene37846:CDS | 60.0% | |
| GGTGGTGACTTCGAGAGCAG+TGG | - | chr5.3:70362851-70362870 | None:intergenic | 60.0% | |
| !! | AGGGAGAGGGAGAGCATCAG+AGG | - | chr5.3:70360421-70360440 | None:intergenic | 60.0% |
| !! | ATTGGCGGTGGTGTTGGTCG+TGG | - | chr5.3:70360694-70360713 | None:intergenic | 60.0% |
| !! | GGAATGAGGGTTGGTCGCGA+CGG | - | chr5.3:70360358-70360377 | None:intergenic | 60.0% |
| CACGACGAATTGCCGCGGCT+CGG | - | chr5.3:70360845-70360864 | None:intergenic | 65.0% | |
| CAGGTGGGTACAGTAGGGGG+TGG | + | chr5.3:70363548-70363567 | MS.gene37846:intron | 65.0% | |
| CCACCGCCAATCAGCCTCTC+CGG | + | chr5.3:70360703-70360722 | MS.gene37846:CDS | 65.0% | |
| CTCCACTAGGGCAGCCACCT+TGG | - | chr5.3:70363228-70363247 | None:intergenic | 65.0% | |
| GACCAAGGTGGCTGCCCTAG+TGG | + | chr5.3:70363223-70363242 | MS.gene37846:CDS | 65.0% | |
| CCGGAGAGGCTGATTGGCGG+TGG | - | chr5.3:70360706-70360725 | None:intergenic | 70.0% | |
| !! | ACGGCGCCGGTGGTGGTTTG+CGG | - | chr5.3:70360339-70360358 | None:intergenic | 70.0% |
| !! | GGCGGTGGTGTTGGTCGTGG+TGG | - | chr5.3:70360691-70360710 | None:intergenic | 70.0% |
| CGGCCGCCGCAAACCACCAC+CGG | + | chr5.3:70360330-70360349 | MS.gene37846:CDS | 75.0% | |
| TTTGCGGCGGCCGGCGATGG+AGG | - | chr5.3:70360323-70360342 | None:intergenic | 75.0% | |
| ! | CGGTGGTGGTTTGCGGCGGC+CGG | - | chr5.3:70360332-70360351 | None:intergenic | 75.0% |
| ! | GCGCCGGTGGTGGTTTGCGG+CGG | - | chr5.3:70360336-70360355 | None:intergenic | 75.0% |
| ! | TGGTTTGCGGCGGCCGGCGA+TGG | - | chr5.3:70360326-70360345 | None:intergenic | 75.0% |
| !! | AGGGTTGGTCGCGACGGCGC+CGG | - | chr5.3:70360352-70360371 | None:intergenic | 75.0% |
| !! | GTTGGTCGCGACGGCGCCGG+TGG | - | chr5.3:70360349-70360368 | None:intergenic | 80.0% |
| !!! | GGTCGCGACGGCGCCGGTGG+TGG | - | chr5.3:70360346-70360365 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 70360315 | 70363793 | 70360315 | ID=MS.gene37846 |
| chr5.3 | mRNA | 70360315 | 70363793 | 70360315 | ID=MS.gene37846.t1;Parent=MS.gene37846 |
| chr5.3 | exon | 70360315 | 70361148 | 70360315 | ID=MS.gene37846.t1.exon1;Parent=MS.gene37846.t1 |
| chr5.3 | CDS | 70360315 | 70361148 | 70360315 | ID=cds.MS.gene37846.t1;Parent=MS.gene37846.t1 |
| chr5.3 | exon | 70361846 | 70361925 | 70361846 | ID=MS.gene37846.t1.exon2;Parent=MS.gene37846.t1 |
| chr5.3 | CDS | 70361846 | 70361925 | 70361846 | ID=cds.MS.gene37846.t1;Parent=MS.gene37846.t1 |
| chr5.3 | exon | 70362262 | 70362443 | 70362262 | ID=MS.gene37846.t1.exon3;Parent=MS.gene37846.t1 |
| chr5.3 | CDS | 70362262 | 70362443 | 70362262 | ID=cds.MS.gene37846.t1;Parent=MS.gene37846.t1 |
| chr5.3 | exon | 70363111 | 70363457 | 70363111 | ID=MS.gene37846.t1.exon4;Parent=MS.gene37846.t1 |
| chr5.3 | CDS | 70363111 | 70363457 | 70363111 | ID=cds.MS.gene37846.t1;Parent=MS.gene37846.t1 |
| chr5.3 | exon | 70363551 | 70363793 | 70363551 | ID=MS.gene37846.t1.exon5;Parent=MS.gene37846.t1 |
| chr5.3 | CDS | 70363551 | 70363793 | 70363551 | ID=cds.MS.gene37846.t1;Parent=MS.gene37846.t1 |
| Gene Sequence |
| Protein sequence |
