Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37904.t1 | XP_003616940.1 | 93.1 | 1139 | 79 | 0 | 1 | 1139 | 1 | 1139 | 0.00E+00 | 2041.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37904.t1 | Q0WVF8 | 44.5 | 1156 | 599 | 11 | 1 | 1137 | 2 | 1133 | 1.9e-262 | 907.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37904.t1 | G7K7L4 | 93.1 | 1139 | 79 | 0 | 1 | 1139 | 1 | 1139 | 0.0e+00 | 2041.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91488 | MS.gene37904 | PPI |
| MS.gene35361 | MS.gene37904 | PPI |
| MS.gene073095 | MS.gene37904 | PPI |
| MS.gene94650 | MS.gene37904 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37904.t1 | MTR_5g085950 | 93.064 | 1139 | 79 | 0 | 1 | 1139 | 1 | 1139 | 0.0 | 2093 |
| MS.gene37904.t1 | MTR_2g100870 | 86.316 | 1140 | 155 | 1 | 1 | 1139 | 1 | 1140 | 0.0 | 1951 |
| MS.gene37904.t1 | MTR_5g055460 | 72.917 | 48 | 13 | 0 | 175 | 222 | 17 | 64 | 2.70e-16 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37904.t1 | AT5G48120 | 44.416 | 1155 | 601 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 907 |
| MS.gene37904.t1 | AT5G48120 | 44.416 | 1155 | 601 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 907 |
| MS.gene37904.t1 | AT5G48120 | 44.416 | 1155 | 601 | 12 | 1 | 1137 | 2 | 1133 | 0.0 | 907 |
Find 206 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATACTGAAGAGCATAAA+TGG | 0.184927 | 5.3:+69525243 | MS.gene37904:CDS |
| GCAGCTCATGCCAGTTCTTC+TGG | 0.201051 | 5.3:+69525869 | MS.gene37904:intron |
| ATGTTCTCAAATGTTGATTT+TGG | 0.210187 | 5.3:-69523424 | None:intergenic |
| CTCCACCAAATAGGTATTTA+TGG | 0.212231 | 5.3:-69522273 | None:intergenic |
| ACTAAGAATGATGGATAGTT+TGG | 0.215757 | 5.3:+69522592 | MS.gene37904:CDS |
| TGAAACTGCTGTTCAGCTTT+TGG | 0.218439 | 5.3:+69523960 | MS.gene37904:CDS |
| ATCTTTGGAACGTGTGCTTT+GGG | 0.229186 | 5.3:-69524798 | None:intergenic |
| TCAATTACAACTTCATTCTT+TGG | 0.231489 | 5.3:-69522341 | None:intergenic |
| CATAAGACGTTAAATTTCTA+TGG | 0.235132 | 5.3:-69523939 | None:intergenic |
| ACTTCTAATTTGAGTGAAAA+AGG | 0.246410 | 5.3:-69523637 | None:intergenic |
| TGCAGAAGCCCTCTTATCTT+TGG | 0.280022 | 5.3:-69524813 | None:intergenic |
| CCCTATTGTGCAGCTTGTTC+GGG | 0.280860 | 5.3:+69526842 | MS.gene37904:intron |
| TCCCTATTGTGCAGCTTGTT+CGG | 0.282613 | 5.3:+69526841 | MS.gene37904:intron |
| TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 5.3:+69524866 | MS.gene37904:CDS |
| GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 5.3:+69524867 | MS.gene37904:CDS |
| AGACACCATAAATACCTATT+TGG | 0.302273 | 5.3:+69522268 | MS.gene37904:CDS |
| AACTTGCAGGTTCAATCTTT+AGG | 0.308558 | 5.3:+69519222 | MS.gene37904:CDS |
| TTGAAATCATTATTTCATAT+TGG | 0.321286 | 5.3:+69523511 | MS.gene37904:CDS |
| TATCTTTGGAACGTGTGCTT+TGG | 0.326234 | 5.3:-69524799 | None:intergenic |
| GGAGGATTGCCATTGACTTT+TGG | 0.329070 | 5.3:+69524705 | MS.gene37904:CDS |
| TTAGAAGTATTATCTGATAT+TGG | 0.336307 | 5.3:+69523652 | MS.gene37904:CDS |
| AAAGCAGGCATTAAACATTC+TGG | 0.338743 | 5.3:-69520391 | None:intergenic |
| AGAGCATAAATGGGATCTTT+TGG | 0.340308 | 5.3:+69525253 | MS.gene37904:CDS |
| GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 5.3:-69524870 | None:intergenic |
| GTTTCAAGCTTGGATGCAAT+TGG | 0.346172 | 5.3:+69518146 | MS.gene37904:CDS |
| TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 5.3:+69518775 | MS.gene37904:intron |
| AGCTCCTTGCCTTTGATTGA+AGG | 0.348324 | 5.3:+69525212 | MS.gene37904:CDS |
| TGCACAGGCTTTGGGCTCTA+TGG | 0.350591 | 5.3:+69524875 | MS.gene37904:CDS |
| AAGAAGAAACTACATGTTAT+TGG | 0.351372 | 5.3:+69522503 | MS.gene37904:CDS |
| GGGCTGGAAAGAGCTATATT+TGG | 0.357872 | 5.3:+69523712 | MS.gene37904:CDS |
| TGGGTTGCTTGGAACTTATA+AGG | 0.358042 | 5.3:+69519133 | MS.gene37904:CDS |
| AAAATCTGGCTCCACCAAAT+AGG | 0.361190 | 5.3:-69522282 | None:intergenic |
| AGAGTGTGCTCTTCCAAGTA+TGG | 0.362079 | 5.3:+69522197 | MS.gene37904:CDS |
| ACTTTGAAACACGGCATTGC+AGG | 0.362941 | 5.3:-69522564 | None:intergenic |
| CTGGGCAGGATCCTTGAAAA+TGG | 0.368274 | 5.3:+69524198 | MS.gene37904:intron |
| CCTCACAAAGTGTCAACTTT+GGG | 0.375679 | 5.3:+69522663 | MS.gene37904:CDS |
| ACTTCAACAAAACAATACTA+TGG | 0.376528 | 5.3:+69523479 | MS.gene37904:CDS |
| TCACCTCCAATGTATATATC+AGG | 0.379956 | 5.3:-69522851 | None:intergenic |
| AGTGAAGGGCTTGCAGATTC+TGG | 0.384723 | 5.3:+69523372 | MS.gene37904:intron |
| CCAATGTATATATCAGGATC+AGG | 0.387226 | 5.3:-69522845 | None:intergenic |
| AGCTGAGGAACTATGAAGTA+TGG | 0.392406 | 5.3:-69522768 | None:intergenic |
| ATGCAGTTTGTGGGCTCTCA+TGG | 0.409981 | 5.3:+69525102 | MS.gene37904:CDS |
| AAAATATTGAGCAATGGCTT+TGG | 0.410682 | 5.3:-69519193 | None:intergenic |
| CTAAGAATGATGGATAGTTT+GGG | 0.411335 | 5.3:+69522593 | MS.gene37904:CDS |
| ATCTTTCAGCTTAATGATGT+TGG | 0.411614 | 5.3:+69524684 | MS.gene37904:CDS |
| GTAGTTCTATACAGAGATAA+AGG | 0.415410 | 5.3:-69522688 | None:intergenic |
| CTCTTCCACTTCAACTCTCC+AGG | 0.421372 | 5.3:+69517436 | MS.gene37904:CDS |
| TAATTCTCCATTTGAAGAAA+AGG | 0.421895 | 5.3:+69524290 | MS.gene37904:CDS |
| CATACAAGATATCCTTATCT+TGG | 0.422143 | 5.3:-69525920 | None:intergenic |
| AAGAAGAAAGTTTCTGAAGA+AGG | 0.429146 | 5.3:-69522014 | None:intergenic |
| GCCTCACAAAGTGTCAACTT+TGG | 0.429891 | 5.3:+69522662 | MS.gene37904:CDS |
| TGCCGATTTAGTCGCCTCAT+TGG | 0.431685 | 5.3:+69519574 | MS.gene37904:CDS |
| CACACCTCTTGACCGAATTA+CGG | 0.435522 | 5.3:-69518365 | None:intergenic |
| GATTCTCTCTGATCCATACT+TGG | 0.436157 | 5.3:-69522210 | None:intergenic |
| AGGATGCTGACAGAGAAAAT+TGG | 0.436925 | 5.3:+69525963 | MS.gene37904:CDS |
| TATTTATAATCAGGCAGATT+GGG | 0.437183 | 5.3:+69519089 | MS.gene37904:intron |
| TAGCTTGGTTGGGTTCTTCA+AGG | 0.437441 | 5.3:+69518850 | MS.gene37904:CDS |
| CTTCAACAAATACCGTAATT+CGG | 0.440067 | 5.3:+69518353 | MS.gene37904:CDS |
| GACAAGCAATCCAGAAGAAC+TGG | 0.440725 | 5.3:-69525879 | None:intergenic |
| CTTCAAACCAATGCAGTTTG+TGG | 0.440773 | 5.3:+69525092 | MS.gene37904:CDS |
| AAAACAATACATAGCTTGGT+TGG | 0.445296 | 5.3:+69518839 | MS.gene37904:CDS |
| TATACTGAATGAAGCTAAAG+AGG | 0.446254 | 5.3:+69525764 | MS.gene37904:CDS |
| AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 5.3:+69518781 | MS.gene37904:intron |
| CTGTCAAATGTCGGCAAACA+TGG | 0.453272 | 5.3:+69527184 | MS.gene37904:CDS |
| TACCAATGAGGCGACTAAAT+CGG | 0.456402 | 5.3:-69519576 | None:intergenic |
| GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 5.3:+69524860 | MS.gene37904:CDS |
| TAAGCTGCTGAAGGAGGGAC+AGG | 0.458598 | 5.3:-69522367 | None:intergenic |
| CAAGATAAGGATATCTTGTA+TGG | 0.460480 | 5.3:+69525921 | MS.gene37904:CDS |
| GTCAGACTTCTCTGCACCAT+TGG | 0.462090 | 5.3:-69524919 | None:intergenic |
| AGTGATGTGGGTATGGTAAC+GGG | 0.463632 | 5.3:+69519162 | MS.gene37904:CDS |
| AATCCATGCAATTTCCTGCC+TGG | 0.465330 | 5.3:-69524266 | None:intergenic |
| GCACACGTTCCAAAGATAAG+AGG | 0.465840 | 5.3:+69524804 | MS.gene37904:CDS |
| TTATTTATAATCAGGCAGAT+TGG | 0.468281 | 5.3:+69519088 | MS.gene37904:intron |
| GACATCTCCCGTAGGGATGA+AGG | 0.469709 | 5.3:+69524735 | MS.gene37904:CDS |
| CGATTATATCCTGATCCATC+TGG | 0.470202 | 5.3:+69520436 | MS.gene37904:CDS |
| GTAAACTGAATGGGAAAGTA+AGG | 0.472587 | 5.3:-69520502 | None:intergenic |
| TTTCAAGCTTGGATGCAATT+GGG | 0.472760 | 5.3:+69518147 | MS.gene37904:CDS |
| GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 5.3:+69525113 | MS.gene37904:CDS |
| TAGAACTACTAGCAGGATGC+AGG | 0.474197 | 5.3:+69522702 | MS.gene37904:CDS |
| TTATCTGATATTGGCATGAC+TGG | 0.475419 | 5.3:+69523661 | MS.gene37904:CDS |
| TGAGATCAACTGCAGAAAGA+TGG | 0.476147 | 5.3:-69525399 | None:intergenic |
| CTGGAGAGTTGAAGTGGAAG+AGG | 0.476984 | 5.3:-69517435 | None:intergenic |
| TTCAAACCAATGCAGTTTGT+GGG | 0.477711 | 5.3:+69525093 | MS.gene37904:CDS |
| GAAAATTTCATGCCACGATA+CGG | 0.478982 | 5.3:+69525339 | MS.gene37904:CDS |
| AAACAATACATAGCTTGGTT+GGG | 0.479932 | 5.3:+69518840 | MS.gene37904:CDS |
| TATGTGATGGATCAAGTAAT+GGG | 0.481857 | 5.3:+69525018 | MS.gene37904:CDS |
| TCATGTGAACCTTCAATCAA+AGG | 0.485416 | 5.3:-69525221 | None:intergenic |
| GAGGAAAAGTGATGTGGGTA+TGG | 0.486473 | 5.3:+69519155 | MS.gene37904:CDS |
| ACATCAGAATCGAAGACTCC+TGG | 0.486780 | 5.3:-69527335 | None:intergenic |
| TTTCAGCTTAATGATGTTGG+AGG | 0.487070 | 5.3:+69524687 | MS.gene37904:CDS |
| CTGCAGAAAGATGGGCATCA+TGG | 0.490694 | 5.3:-69525390 | None:intergenic |
| CAAAATTTAGGTTAGAGAGT+TGG | 0.491451 | 5.3:+69518318 | MS.gene37904:intron |
| GCAGTACGAGGTGCACTTGT+GGG | 0.492437 | 5.3:+69519114 | MS.gene37904:CDS |
| CACGGCATTGCAGGAAGGAA+TGG | 0.494774 | 5.3:-69522555 | None:intergenic |
| AATCTTTAGGAATGTATGAC+AGG | 0.496654 | 5.3:+69519235 | MS.gene37904:CDS |
| GTTTGTGGGCTCTCATGGAT+TGG | 0.499724 | 5.3:+69525107 | MS.gene37904:CDS |
| GACTCAACAATATGAAAAGC+AGG | 0.501339 | 5.3:-69520406 | None:intergenic |
| GCAAATAGACCAGATGGATC+AGG | 0.505582 | 5.3:-69520445 | None:intergenic |
| GACAGAAGATATCCAAGATA+AGG | 0.506061 | 5.3:+69525908 | MS.gene37904:CDS |
| TGCAGCTATAGATGCAGAAA+GGG | 0.509949 | 5.3:+69520366 | MS.gene37904:CDS |
| AACATCATTAAGCTGAAAGA+TGG | 0.513197 | 5.3:-69524682 | None:intergenic |
| GCACACTCTAAGATACTGTA+AGG | 0.513964 | 5.3:-69522183 | None:intergenic |
| GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 5.3:-69522546 | None:intergenic |
| AAATACTGAAGAGCATAAAT+GGG | 0.516826 | 5.3:+69525244 | MS.gene37904:CDS |
| GAGATCAACTGCAGAAAGAT+GGG | 0.518004 | 5.3:-69525398 | None:intergenic |
| CTTACATGTGTAAACTGAAT+GGG | 0.518044 | 5.3:-69520511 | None:intergenic |
| GTTGATATTTGGAACCAGGC+AGG | 0.518291 | 5.3:+69524252 | MS.gene37904:CDS |
| TGCAAAGAGATGACCTATCA+AGG | 0.519237 | 5.3:+69520818 | MS.gene37904:CDS |
| AGGTGCACTTGTGGGTTGCT+TGG | 0.522192 | 5.3:+69519122 | MS.gene37904:CDS |
| AGTGGAAGAGGAGTGAATGT+AGG | 0.522673 | 5.3:-69517423 | None:intergenic |
| GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 5.3:-69522009 | None:intergenic |
| TGGGTTCTTCAAGGAAAGAC+TGG | 0.525643 | 5.3:+69518859 | MS.gene37904:CDS |
| CCTGATCCTGATATATACAT+TGG | 0.526026 | 5.3:+69522845 | MS.gene37904:CDS |
| CACAATAAGCTGCTGAAGGA+GGG | 0.526498 | 5.3:-69522372 | None:intergenic |
| TTCTGTTGATATTTGGAACC+AGG | 0.527505 | 5.3:+69524248 | MS.gene37904:CDS |
| AGAAGGAGAGGAATAACAAA+TGG | 0.529006 | 5.3:-69521997 | None:intergenic |
| GTGCAGCTATAGATGCAGAA+AGG | 0.530116 | 5.3:+69520365 | MS.gene37904:CDS |
| TTCTTTAGCAGCCAACCAGT+GGG | 0.532159 | 5.3:+69520785 | MS.gene37904:intron |
| TATATTTGGCAATCTTTCTG+AGG | 0.533100 | 5.3:+69523726 | MS.gene37904:CDS |
| CACCATAAATACCTATTTGG+TGG | 0.533738 | 5.3:+69522271 | MS.gene37904:CDS |
| AAGTGATGTGGGTATGGTAA+CGG | 0.534253 | 5.3:+69519161 | MS.gene37904:CDS |
| ATTGATGGCTCGCATAATGC+TGG | 0.535761 | 5.3:+69522632 | MS.gene37904:CDS |
| CAGTAAAACAATACATAGCT+TGG | 0.541980 | 5.3:+69518835 | MS.gene37904:CDS |
| AAAGTATCCCTTCATCCCTA+CGG | 0.543642 | 5.3:-69524743 | None:intergenic |
| AAGTATCCCTTCATCCCTAC+GGG | 0.545085 | 5.3:-69524742 | None:intergenic |
| TGAGAGCCCACAAACTGCAT+TGG | 0.545141 | 5.3:-69525099 | None:intergenic |
| TGGAAAGTCAATACCATCTG+TGG | 0.545953 | 5.3:-69522321 | None:intergenic |
| GATCCTGATATATACATTGG+AGG | 0.546263 | 5.3:+69522848 | MS.gene37904:CDS |
| GCTTACATGTGTAAACTGAA+TGG | 0.546716 | 5.3:-69520512 | None:intergenic |
| GAAGTCTGACGAACTTACCT+TGG | 0.546814 | 5.3:+69524932 | MS.gene37904:CDS |
| GTACCATCAGAGTCCTTGAT+AGG | 0.548690 | 5.3:-69520831 | None:intergenic |
| GAACCAGGCAGGAAATTGCA+TGG | 0.548786 | 5.3:+69524263 | MS.gene37904:CDS |
| AATCGGCATGATGTTCTAGC+AGG | 0.551387 | 5.3:-69519559 | None:intergenic |
| GGGTATCAATTGCATCATCC+AGG | 0.555008 | 5.3:+69527317 | MS.gene37904:intron |
| ACATCTCCCGTAGGGATGAA+GGG | 0.557429 | 5.3:+69524736 | MS.gene37904:CDS |
| CTCTGTATAGAACTACTAGC+AGG | 0.557547 | 5.3:+69522695 | MS.gene37904:CDS |
| TTGCACATGAGCATCCCCAC+TGG | 0.557692 | 5.3:-69520800 | None:intergenic |
| TAGAACCTGGAGAGTTGAAG+TGG | 0.560342 | 5.3:-69517441 | None:intergenic |
| AAGCTTGCAAATAGACCAGA+TGG | 0.562090 | 5.3:-69520451 | None:intergenic |
| TTCTTCACTACATTCAGCAA+AGG | 0.562396 | 5.3:+69522032 | MS.gene37904:CDS |
| CAATGTATATATCAGGATCA+GGG | 0.563399 | 5.3:-69522844 | None:intergenic |
| TGATATTGGCATGACTGGCA+TGG | 0.564848 | 5.3:+69523666 | MS.gene37904:CDS |
| AGCAGTACGAGGTGCACTTG+TGG | 0.566441 | 5.3:+69519113 | MS.gene37904:CDS |
| GTTCTTACTGACGTATGTCT+CGG | 0.567191 | 5.3:+69525050 | MS.gene37904:CDS |
| GATCTGATACTTCATCGTCC+AGG | 0.568050 | 5.3:+69525423 | MS.gene37904:CDS |
| GCACAATAAGCTGCTGAAGG+AGG | 0.569180 | 5.3:-69522373 | None:intergenic |
| TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 5.3:-69518183 | None:intergenic |
| ATATGTGATGGATCAAGTAA+TGG | 0.574191 | 5.3:+69525017 | MS.gene37904:CDS |
| ATAAGGAGGAAAAGTGATGT+GGG | 0.575456 | 5.3:+69519150 | MS.gene37904:CDS |
| TTTAGGAATGTATGACAGGA+AGG | 0.576270 | 5.3:+69519239 | MS.gene37904:CDS |
| TATAAGGAGGAAAAGTGATG+TGG | 0.578294 | 5.3:+69519149 | MS.gene37904:CDS |
| TTTCTTTAGCAGCCAACCAG+TGG | 0.579444 | 5.3:+69520784 | MS.gene37904:intron |
| TACGGCGCTATTTCTGTGCA+AGG | 0.579586 | 5.3:+69522479 | MS.gene37904:CDS |
| TCTTTGGAACGTGTGCTTTG+GGG | 0.583100 | 5.3:-69524797 | None:intergenic |
| CACACGTTCCAAAGATAAGA+GGG | 0.583141 | 5.3:+69524805 | MS.gene37904:CDS |
| TTTACTCTAGCACCCACAGA+TGG | 0.595515 | 5.3:+69522308 | MS.gene37904:CDS |
| TTTGCACAATAAGCTGCTGA+AGG | 0.596021 | 5.3:-69522376 | None:intergenic |
| TATCTATCCGTTGAGAACAC+AGG | 0.597641 | 5.3:+69526914 | MS.gene37904:CDS |
| ATTGCATCTTATGAGATGTA+CGG | 0.599452 | 5.3:+69522461 | MS.gene37904:CDS |
| AAACTCATTTCAAAATCCAA+TGG | 0.600291 | 5.3:+69524903 | MS.gene37904:CDS |
| TTTATAATAACCCTCCTCAA+GGG | 0.602040 | 5.3:+69524840 | MS.gene37904:CDS |
| TCATTCAGTATAACAATCAG+TGG | 0.604482 | 5.3:-69525753 | None:intergenic |
| AATATGAAGAGCGTCTTCCA+AGG | 0.605402 | 5.3:-69524949 | None:intergenic |
| ACATGAGCATCCCCACTGGT+TGG | 0.605938 | 5.3:-69520796 | None:intergenic |
| TGAACCTTCAATCAAAGGCA+AGG | 0.606758 | 5.3:-69525216 | None:intergenic |
| AAAATATGACATCTCCCGTA+GGG | 0.609695 | 5.3:+69524728 | MS.gene37904:CDS |
| TACATGTAAGACTGAACAGA+AGG | 0.611525 | 5.3:-69522804 | None:intergenic |
| CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 5.3:-69524851 | None:intergenic |
| CCCAAAGTTGACACTTTGTG+AGG | 0.617867 | 5.3:-69522663 | None:intergenic |
| TGACCTATCAAGGACTCTGA+TGG | 0.620654 | 5.3:+69520828 | MS.gene37904:CDS |
| ATGTATATATCAGGATCAGG+GGG | 0.621790 | 5.3:-69522842 | None:intergenic |
| CCTTGAAAATGGAGGTGCAG+AGG | 0.624514 | 5.3:+69524209 | MS.gene37904:CDS |
| TGTCAAACCTGTGTTCTCAA+CGG | 0.625577 | 5.3:-69526921 | None:intergenic |
| GAAAATATGACATCTCCCGT+AGG | 0.626631 | 5.3:+69524727 | MS.gene37904:CDS |
| GCAATGTAGCTGTCAAATGT+CGG | 0.627381 | 5.3:+69527175 | MS.gene37904:CDS |
| GGAAAAGGTTTACTGTTGCG+TGG | 0.627473 | 5.3:+69525128 | MS.gene37904:CDS |
| AGAACTACTAGCAGGATGCA+GGG | 0.628293 | 5.3:+69522703 | MS.gene37904:CDS |
| AATATGTTGCAGATATGTGA+TGG | 0.628938 | 5.3:+69525005 | MS.gene37904:CDS |
| ATCAAGAGAGAGAAGTTCCA+CGG | 0.632018 | 5.3:-69523602 | None:intergenic |
| GGAAAGTCAATACCATCTGT+GGG | 0.633762 | 5.3:-69522320 | None:intergenic |
| GGAATTAAATAAGAAAGCTG+AGG | 0.637726 | 5.3:-69522783 | None:intergenic |
| CTTATATAGAGGCCGTATCG+TGG | 0.637874 | 5.3:-69525351 | None:intergenic |
| TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 5.3:-69524850 | None:intergenic |
| TAGCTTGATAATTGATGACG+AGG | 0.643192 | 5.3:+69522415 | MS.gene37904:CDS |
| AGTATGGTGAAATATGTCCC+AGG | 0.646741 | 5.3:-69522752 | None:intergenic |
| AATACCGTAATTCGGTCAAG+AGG | 0.649510 | 5.3:+69518361 | MS.gene37904:CDS |
| GACAGACATGACATGCGCAA+AGG | 0.652071 | 5.3:-69525727 | None:intergenic |
| GGCAGGATCCTTGAAAATGG+AGG | 0.653631 | 5.3:+69524201 | MS.gene37904:intron |
| TGTAGACTACTCTCATAAGA+CGG | 0.654224 | 5.3:+69526452 | MS.gene37904:CDS |
| AATGTATATATCAGGATCAG+GGG | 0.655283 | 5.3:-69522843 | None:intergenic |
| TGAAACACGGCATTGCAGGA+AGG | 0.657191 | 5.3:-69522560 | None:intergenic |
| AACGGATAGATACGCACATG+AGG | 0.657874 | 5.3:-69526903 | None:intergenic |
| TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 5.3:+69525357 | MS.gene37904:CDS |
| AAGAACATGAAAAGCTTCCG+CGG | 0.666547 | 5.3:-69525288 | None:intergenic |
| CGAAGCAAGGACTACCAATG+AGG | 0.668037 | 5.3:-69519588 | None:intergenic |
| TTTGGCAAGAAAATGTGCCG+CGG | 0.676050 | 5.3:+69525271 | MS.gene37904:CDS |
| CAACTGGAACAACACCCTTG+AGG | 0.676901 | 5.3:-69524854 | None:intergenic |
| ATTCATGCAAGCTACTTCCG+TGG | 0.680489 | 5.3:+69523989 | MS.gene37904:CDS |
| AAGCTGCTGAAGGAGGGACA+GGG | 0.680643 | 5.3:-69522366 | None:intergenic |
| TAGTAAAAGACTTTGAAACA+CGG | 0.681874 | 5.3:-69522573 | None:intergenic |
| GTTGCTTGGAACTTATAAGG+AGG | 0.693521 | 5.3:+69519136 | MS.gene37904:CDS |
| GATGTGACGAGTCAATTGAG+TGG | 0.694716 | 5.3:-69517396 | None:intergenic |
| TCTTTAGCAGCCAACCAGTG+GGG | 0.705927 | 5.3:+69520786 | MS.gene37904:intron |
| GCAGATTGGGAAGCAGTACG+AGG | 0.715218 | 5.3:+69519102 | MS.gene37904:CDS |
| ATTCATGTCAATCATCACAG+AGG | 0.767349 | 5.3:+69523456 | MS.gene37904:CDS |
| TGTATATATCAGGATCAGGG+GGG | 0.779548 | 5.3:-69522841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 69517386 | 69527354 | 69517386 | ID=MS.gene37904 |
| chr5.3 | mRNA | 69517386 | 69527354 | 69517386 | ID=MS.gene37904.t1;Parent=MS.gene37904 |
| chr5.3 | exon | 69517386 | 69517457 | 69517386 | ID=MS.gene37904.t1.exon1;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69517386 | 69517457 | 69517386 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69518146 | 69518208 | 69518146 | ID=MS.gene37904.t1.exon2;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69518146 | 69518208 | 69518146 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69518328 | 69518382 | 69518328 | ID=MS.gene37904.t1.exon3;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69518328 | 69518382 | 69518328 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69518783 | 69518880 | 69518783 | ID=MS.gene37904.t1.exon4;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69518783 | 69518880 | 69518783 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69519102 | 69519260 | 69519102 | ID=MS.gene37904.t1.exon5;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69519102 | 69519260 | 69519102 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69519536 | 69519595 | 69519536 | ID=MS.gene37904.t1.exon6;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69519536 | 69519595 | 69519536 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69520340 | 69520528 | 69520340 | ID=MS.gene37904.t1.exon7;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69520340 | 69520528 | 69520340 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69520796 | 69520849 | 69520796 | ID=MS.gene37904.t1.exon8;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69520796 | 69520849 | 69520796 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69521967 | 69522053 | 69521967 | ID=MS.gene37904.t1.exon9;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69521967 | 69522053 | 69521967 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69522176 | 69522869 | 69522176 | ID=MS.gene37904.t1.exon10;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69522176 | 69522869 | 69522176 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69523374 | 69523747 | 69523374 | ID=MS.gene37904.t1.exon11;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69523374 | 69523747 | 69523374 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69523937 | 69524010 | 69523937 | ID=MS.gene37904.t1.exon12;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69523937 | 69524010 | 69523937 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69524206 | 69524311 | 69524206 | ID=MS.gene37904.t1.exon13;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69524206 | 69524311 | 69524206 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69524573 | 69525444 | 69524573 | ID=MS.gene37904.t1.exon14;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69524573 | 69525444 | 69524573 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69525710 | 69525785 | 69525710 | ID=MS.gene37904.t1.exon15;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69525710 | 69525785 | 69525710 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69525873 | 69525984 | 69525873 | ID=MS.gene37904.t1.exon16;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69525873 | 69525984 | 69525873 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69526397 | 69526473 | 69526397 | ID=MS.gene37904.t1.exon17;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69526397 | 69526473 | 69526397 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69526855 | 69526935 | 69526855 | ID=MS.gene37904.t1.exon18;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69526855 | 69526935 | 69526855 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69527126 | 69527205 | 69527126 | ID=MS.gene37904.t1.exon19;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69527126 | 69527205 | 69527126 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| chr5.3 | exon | 69527318 | 69527354 | 69527318 | ID=MS.gene37904.t1.exon20;Parent=MS.gene37904.t1 |
| chr5.3 | CDS | 69527318 | 69527354 | 69527318 | ID=cds.MS.gene37904.t1;Parent=MS.gene37904.t1 |
| Gene Sequence |
| Protein sequence |
