Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35361.t1 | KEH38938.1 | 99.3 | 759 | 5 | 0 | 1 | 759 | 87 | 845 | 0.00E+00 | 1521.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35361.t1 | Q8W4M7 | 85.2 | 759 | 111 | 1 | 1 | 759 | 1 | 758 | 0.0e+00 | 1330.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35361.t1 | A0A072VC04 | 99.3 | 759 | 5 | 0 | 1 | 759 | 87 | 845 | 0.0e+00 | 1521.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35361 | MS.gene016765 | PPI |
MS.gene35361 | MS.gene75670 | PPI |
MS.gene35361 | MS.gene59983 | PPI |
MS.gene35361 | MS.gene060573 | PPI |
MS.gene35361 | MS.gene045358 | PPI |
MS.gene35361 | MS.gene069880 | PPI |
MS.gene35361 | MS.gene36364 | PPI |
MS.gene35361 | MS.gene044567 | PPI |
MS.gene35361 | MS.gene85160 | PPI |
MS.gene35361 | MS.gene37904 | PPI |
MS.gene35361 | MS.gene95405 | PPI |
MS.gene042336 | MS.gene35361 | PPI |
MS.gene35361 | MS.gene76545 | PPI |
MS.gene35361 | MS.gene81596 | PPI |
MS.gene35361 | MS.gene038750 | PPI |
MS.gene35361 | MS.gene79893 | PPI |
MS.gene35361 | MS.gene05320 | PPI |
MS.gene35361 | MS.gene81861 | PPI |
MS.gene35361 | MS.gene77531 | PPI |
MS.gene35361 | MS.gene95407 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35361.t1 | MTR_2g084735 | 99.341 | 759 | 5 | 0 | 1 | 759 | 87 | 845 | 0.0 | 1578 |
MS.gene35361.t1 | MTR_2g084735 | 99.341 | 759 | 5 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1574 |
MS.gene35361.t1 | MTR_1g026490 | 23.040 | 829 | 454 | 26 | 3 | 728 | 17 | 764 | 3.74e-41 | 163 |
MS.gene35361.t1 | MTR_2g102150 | 28.223 | 287 | 190 | 5 | 432 | 702 | 416 | 702 | 8.24e-31 | 130 |
MS.gene35361.t1 | MTR_2g102150 | 27.338 | 278 | 146 | 10 | 3 | 248 | 4 | 257 | 4.77e-18 | 89.7 |
MS.gene35361.t1 | MTR_0147s0060 | 26.582 | 316 | 176 | 8 | 447 | 707 | 573 | 887 | 1.64e-21 | 100 |
MS.gene35361.t1 | MTR_0147s0060 | 27.700 | 213 | 128 | 7 | 68 | 265 | 197 | 398 | 1.45e-13 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35361.t1 | AT1G03190 | 85.244 | 759 | 111 | 1 | 1 | 759 | 1 | 758 | 0.0 | 1374 |
MS.gene35361.t1 | AT1G03190 | 85.244 | 759 | 111 | 1 | 1 | 759 | 1 | 758 | 0.0 | 1374 |
MS.gene35361.t1 | AT1G20720 | 24.028 | 849 | 461 | 27 | 3 | 744 | 27 | 798 | 2.12e-43 | 170 |
MS.gene35361.t1 | AT1G20720 | 23.910 | 849 | 462 | 27 | 3 | 744 | 27 | 798 | 3.10e-43 | 169 |
MS.gene35361.t1 | AT1G79950 | 22.412 | 763 | 470 | 21 | 3 | 702 | 49 | 752 | 3.93e-42 | 165 |
MS.gene35361.t1 | AT1G79950 | 22.412 | 763 | 470 | 21 | 3 | 702 | 49 | 752 | 3.93e-42 | 165 |
MS.gene35361.t1 | AT1G79950 | 22.412 | 763 | 470 | 21 | 3 | 702 | 49 | 752 | 3.93e-42 | 165 |
MS.gene35361.t1 | AT1G79890 | 28.383 | 303 | 164 | 7 | 447 | 701 | 304 | 601 | 2.40e-29 | 124 |
MS.gene35361.t1 | AT1G79890 | 28.383 | 303 | 164 | 7 | 447 | 701 | 400 | 697 | 5.13e-29 | 124 |
MS.gene35361.t1 | AT1G79890 | 28.383 | 303 | 164 | 7 | 447 | 701 | 553 | 850 | 5.34e-29 | 124 |
MS.gene35361.t1 | AT1G79890 | 27.660 | 188 | 114 | 6 | 65 | 239 | 180 | 358 | 1.31e-11 | 68.9 |
MS.gene35361.t1 | AT1G79950 | 26.766 | 269 | 178 | 3 | 453 | 702 | 484 | 752 | 5.68e-26 | 114 |
MS.gene35361.t1 | AT1G79950 | 25.725 | 276 | 154 | 10 | 3 | 248 | 49 | 303 | 1.51e-16 | 84.7 |
MS.gene35361.t1 | AT1G79950 | 26.766 | 269 | 178 | 3 | 453 | 702 | 484 | 752 | 5.68e-26 | 114 |
MS.gene35361.t1 | AT1G79950 | 25.725 | 276 | 154 | 10 | 3 | 248 | 49 | 303 | 1.51e-16 | 84.7 |
MS.gene35361.t1 | AT1G79950 | 26.766 | 269 | 178 | 3 | 453 | 702 | 484 | 752 | 7.86e-26 | 114 |
MS.gene35361.t1 | AT1G79950 | 25.725 | 276 | 154 | 10 | 3 | 248 | 49 | 303 | 1.85e-16 | 84.7 |
MS.gene35361.t1 | AT1G79950 | 26.766 | 269 | 178 | 3 | 453 | 702 | 484 | 752 | 8.09e-26 | 114 |
MS.gene35361.t1 | AT1G79950 | 25.725 | 276 | 154 | 10 | 3 | 248 | 49 | 303 | 1.77e-16 | 84.7 |
MS.gene35361.t1 | AT1G79890 | 32.020 | 203 | 124 | 4 | 447 | 640 | 553 | 750 | 1.46e-24 | 110 |
MS.gene35361.t1 | AT1G79890 | 27.660 | 188 | 114 | 6 | 65 | 239 | 180 | 358 | 1.15e-11 | 68.9 |
Find 162 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCATTTCCTTGGATATTA+TGG | 0.200561 | 2.3:+13126954 | None:intergenic |
ATCACTTCTCATATCAAATT+TGG | 0.202870 | 2.3:+13121467 | None:intergenic |
GTCAAAAGGTTCTATTATAA+TGG | 0.222827 | 2.3:+13121986 | None:intergenic |
ATCCGTTCAAAGGCTGATTA+TGG | 0.223234 | 2.3:-13119017 | MS.gene35361:CDS |
ATCATGTATGCGTATTGTTC+TGG | 0.231249 | 2.3:+13129384 | None:intergenic |
GAGACTGCTTCATGATTATA+TGG | 0.255392 | 2.3:-13129178 | MS.gene35361:CDS |
GTCAATAGCTGGAATGAAAA+TGG | 0.263376 | 2.3:-13121339 | MS.gene35361:CDS |
GAATTATGGACGGCTCTTAT+TGG | 0.279757 | 2.3:-13121430 | MS.gene35361:CDS |
TTTCGTCAGTTACTCATATA+TGG | 0.283293 | 2.3:-13121370 | MS.gene35361:CDS |
AGACTTGGATAAGATAGTTT+TGG | 0.293320 | 2.3:-13116950 | MS.gene35361:CDS |
GATGCAGTTCCTCAGGAAAA+TGG | 0.304665 | 2.3:-13117028 | MS.gene35361:intron |
TCCCGGTGTTTATACTTTGC+AGG | 0.308740 | 2.3:-13128926 | MS.gene35361:intron |
CTCGAAATGCCGACTGGAAC+TGG | 0.315766 | 2.3:-13129321 | MS.gene35361:CDS |
CAACAGGCTTGTTGAGGGTT+TGG | 0.325679 | 2.3:-13122468 | MS.gene35361:CDS |
CTTGGCGTAGTGAGGAATTA+TGG | 0.332072 | 2.3:-13121444 | MS.gene35361:CDS |
TATTCCTGATCCTGTATTGC+AGG | 0.332347 | 2.3:-13121949 | MS.gene35361:intron |
TTCTGGGTATATGTTGTCAT+AGG | 0.332524 | 2.3:+13129401 | None:intergenic |
ATAGAGAAAACAAAGCTAAC+AGG | 0.337488 | 2.3:+13122170 | None:intergenic |
GATATTATGGCAGCCACCTT+TGG | 0.345249 | 2.3:+13126967 | None:intergenic |
CACCAGTCTTATCATATGGC+TGG | 0.345504 | 2.3:+13117004 | None:intergenic |
AAGACGAGGGTACAAATCTA+TGG | 0.353646 | 2.3:+13121705 | None:intergenic |
GGCTCTAAGAGGAGATCTTC+CGG | 0.356762 | 2.3:-13122447 | MS.gene35361:CDS |
TGGCAAAATCACATATTGTT+TGG | 0.357211 | 2.3:+13122039 | None:intergenic |
AATTGACTGCTAGTTGGGTT+AGG | 0.358442 | 2.3:-13129032 | MS.gene35361:CDS |
CAGTCGGTTGTGATTACATC+TGG | 0.361744 | 2.3:-13121739 | MS.gene35361:CDS |
AGACCACCACATTGGCAAAC+TGG | 0.376041 | 2.3:+13127013 | None:intergenic |
CCATGTCTGTGCTCAAGTTC+AGG | 0.382814 | 2.3:+13118198 | None:intergenic |
CACATATTGTTTGGATATGA+AGG | 0.382822 | 2.3:+13122048 | None:intergenic |
GTAAAACTTCGACTGACAAC+AGG | 0.390520 | 2.3:+13121670 | None:intergenic |
AACTCACACGTAGGAACATT+CGG | 0.398778 | 2.3:+13128991 | None:intergenic |
GGCCGTTTAGTAATCATGTT+TGG | 0.402094 | 2.3:-13119411 | MS.gene35361:CDS |
ATACTAAAGGAGGCTGTACC+TGG | 0.407094 | 2.3:-13122290 | MS.gene35361:CDS |
GATTATATGGTTAAATGTAT+TGG | 0.407235 | 2.3:-13129165 | MS.gene35361:CDS |
TGAGGCATTCTTTCGTCAAA+AGG | 0.407479 | 2.3:+13121972 | None:intergenic |
TTGTAGGATCTGAGAACGTT+TGG | 0.410510 | 2.3:-13127081 | MS.gene35361:intron |
TTCTCTATTCTTAACCATGC+TGG | 0.411219 | 2.3:-13122155 | MS.gene35361:CDS |
CAGTTTCCAAGCGCCCTTCA+AGG | 0.414889 | 2.3:+13122213 | None:intergenic |
TGATTCTTTCTGCATTTCCT+TGG | 0.415162 | 2.3:+13126945 | None:intergenic |
AATCGTGATTCGGTTGATGC+TGG | 0.422124 | 2.3:-13129063 | MS.gene35361:CDS |
TGCTGCTGAGAATCGTGATT+CGG | 0.427864 | 2.3:-13129073 | MS.gene35361:CDS |
GTGCAATAAATAAGCTTGAT+TGG | 0.432547 | 2.3:+13129240 | None:intergenic |
CTTGTTGTCTCAGGAAGACT+TGG | 0.433336 | 2.3:-13116965 | MS.gene35361:CDS |
TCAGCCTTACGAATATTTCC+AGG | 0.435015 | 2.3:+13122272 | None:intergenic |
TTGCTTAATGTGTACTGAAA+AGG | 0.435940 | 2.3:+13119384 | None:intergenic |
TCCGTTCAAAGGCTGATTAT+GGG | 0.436320 | 2.3:-13119016 | MS.gene35361:CDS |
TAGGAAATTGACTGCTAGTT+GGG | 0.441458 | 2.3:-13129037 | MS.gene35361:CDS |
CTTGCATAGCTGCGGATGGT+TGG | 0.443082 | 2.3:-13122340 | MS.gene35361:intron |
GCTCTAAGAGGAGATCTTCC+GGG | 0.448367 | 2.3:-13122446 | MS.gene35361:intron |
TCAATATTTGCTTGATCCAA+AGG | 0.449619 | 2.3:-13126983 | MS.gene35361:CDS |
TTTGATATGAGAAGTGATCT+TGG | 0.450506 | 2.3:-13121462 | MS.gene35361:CDS |
TCATGTATGCGTATTGTTCT+GGG | 0.453029 | 2.3:+13129385 | None:intergenic |
TGTAGGATCTGAGAACGTTT+GGG | 0.453546 | 2.3:-13127080 | MS.gene35361:intron |
TTGCACTTGGATTGTCTTCG+AGG | 0.453900 | 2.3:-13129125 | MS.gene35361:CDS |
AGGTTCAAGGCCACAGATGC+TGG | 0.455551 | 2.3:-13122509 | MS.gene35361:CDS |
CACCAAACATGATTACTAAA+CGG | 0.458691 | 2.3:+13119409 | None:intergenic |
AGTATATCATCAGGCAAGGC+TGG | 0.460574 | 2.3:+13122308 | None:intergenic |
GTGCCACCAGTCTTATCATA+TGG | 0.465909 | 2.3:+13117000 | None:intergenic |
CTAACCTGCAATACAGGATC+AGG | 0.466800 | 2.3:+13121945 | None:intergenic |
AGAACGTTTGGGAAGGAGAA+AGG | 0.467677 | 2.3:-13127069 | MS.gene35361:CDS |
GCTTGTCTTTATTGAGACTC+AGG | 0.469960 | 2.3:-13121206 | MS.gene35361:CDS |
AACGATCTAAATTGCCTGGT+TGG | 0.471483 | 2.3:-13118247 | MS.gene35361:CDS |
TCTGGGTATATGTTGTCATA+GGG | 0.475829 | 2.3:+13129402 | None:intergenic |
TCAGCGCTAACCTGCAATAC+AGG | 0.475858 | 2.3:+13121939 | None:intergenic |
TCATTCATTAATGATGACAT+TGG | 0.476660 | 2.3:-13122093 | MS.gene35361:CDS |
GCATATGCAATCTCTTGTTA+AGG | 0.477444 | 2.3:+13121642 | None:intergenic |
GACTCCGTGCTGAATACAAC+AGG | 0.479792 | 2.3:-13122484 | MS.gene35361:CDS |
ATTGACTGCTAGTTGGGTTA+GGG | 0.480006 | 2.3:-13129031 | MS.gene35361:CDS |
GTTGAGGGTTTGGCTCTAAG+AGG | 0.480274 | 2.3:-13122458 | MS.gene35361:CDS |
TTTGAGCAGTATGAAAGAGC+TGG | 0.482537 | 2.3:-13128967 | MS.gene35361:CDS |
ATATCAAATTTGGTACTGAC+TGG | 0.482837 | 2.3:+13121477 | None:intergenic |
GATAAACGATCTAAATTGCC+TGG | 0.483154 | 2.3:-13118251 | MS.gene35361:CDS |
TACCGCAAGGCTTGTGATTG+TGG | 0.487141 | 2.3:-13121151 | MS.gene35361:CDS |
TGCTTACTCGAAATGCCGAC+TGG | 0.488022 | 2.3:-13129327 | MS.gene35361:CDS |
TCAATACCTTGAAGGGCGCT+TGG | 0.491459 | 2.3:-13122219 | MS.gene35361:CDS |
GCCTCCTTTAGTATATCATC+AGG | 0.493634 | 2.3:+13122299 | None:intergenic |
GTAGGAAATTGACTGCTAGT+TGG | 0.498441 | 2.3:-13129038 | MS.gene35361:CDS |
ATAAGCTTGATTGGTGATTG+AGG | 0.498487 | 2.3:+13129249 | None:intergenic |
TATGATAAGACTGGTGGCAC+TGG | 0.500108 | 2.3:-13116997 | MS.gene35361:CDS |
TGAACTGGTAGGAAGGTTCA+AGG | 0.509007 | 2.3:-13122522 | MS.gene35361:intron |
ATGTCATCATTAATGAATGA+AGG | 0.510570 | 2.3:+13122096 | None:intergenic |
GTGAGGAGGCAGACTGTTGA+TGG | 0.514595 | 2.3:-13126859 | MS.gene35361:CDS |
GAATACAACAGGCTTGTTGA+GGG | 0.520111 | 2.3:-13122473 | MS.gene35361:CDS |
CTGCCACGGGTAAGAACCAT+AGG | 0.520257 | 2.3:+13121619 | None:intergenic |
CTTTATTGAGACTCAGGATG+TGG | 0.522127 | 2.3:-13121200 | MS.gene35361:CDS |
CTATGGTTCTTACCCGTGGC+AGG | 0.526008 | 2.3:-13121618 | MS.gene35361:intron |
GATTAGTTCAATACCTTGAA+GGG | 0.526412 | 2.3:-13122226 | MS.gene35361:CDS |
TGGACGGCTCTTATTGGAGA+TGG | 0.526576 | 2.3:-13121424 | MS.gene35361:CDS |
TGGCATCAGTTGTTCCAGAC+GGG | 0.527343 | 2.3:-13121404 | MS.gene35361:CDS |
TTGAGCAGTATGAAAGAGCT+GGG | 0.528495 | 2.3:-13128966 | MS.gene35361:CDS |
TGGATGGTATAGTCAATAGC+TGG | 0.529147 | 2.3:-13121350 | MS.gene35361:CDS |
AATACAGGATCAGGAATATG+AGG | 0.532159 | 2.3:+13121954 | None:intergenic |
AAGAGATTGCATATGCCCTA+TGG | 0.532717 | 2.3:-13121635 | MS.gene35361:CDS |
TTTCCTTGCATAGCTGCGGA+TGG | 0.533853 | 2.3:-13122344 | MS.gene35361:intron |
CTTGCCTGATGATATACTAA+AGG | 0.535917 | 2.3:-13122303 | MS.gene35361:CDS |
GAGACAAGCTGCACAGTGTG+TGG | 0.536170 | 2.3:-13119048 | MS.gene35361:CDS |
TCCCATAATCAGCCTTTGAA+CGG | 0.539525 | 2.3:+13119015 | None:intergenic |
TGTCTGTGCTCAAGTTCAGG+TGG | 0.543104 | 2.3:+13118201 | None:intergenic |
CAGCCTTTGAACGGATTACA+CGG | 0.544105 | 2.3:+13119024 | None:intergenic |
ACCAGTCTTATCATATGGCT+GGG | 0.544410 | 2.3:+13117005 | None:intergenic |
AGATTAGTTCAATACCTTGA+AGG | 0.545205 | 2.3:-13122227 | MS.gene35361:CDS |
AAACGAACCCTAGATGCAAA+AGG | 0.545284 | 2.3:-13129354 | MS.gene35361:CDS |
TGAATACAACAGGCTTGTTG+AGG | 0.549510 | 2.3:-13122474 | MS.gene35361:CDS |
AAGGCTTGTGATTGTGGAAG+AGG | 0.550966 | 2.3:-13121145 | MS.gene35361:CDS |
GAACGTTTGGGAAGGAGAAA+GGG | 0.555799 | 2.3:-13127068 | MS.gene35361:CDS |
ATCGTGATTCGGTTGATGCT+GGG | 0.556188 | 2.3:-13129062 | MS.gene35361:CDS |
GTCAGTTACTCATATATGGA+TGG | 0.556250 | 2.3:-13121366 | MS.gene35361:CDS |
TGCCCTATGGTTCTTACCCG+TGG | 0.557483 | 2.3:-13121622 | MS.gene35361:CDS |
TGCAGAGGAAAGGTTGCGGA+AGG | 0.558522 | 2.3:-13119456 | MS.gene35361:intron |
GTCTGTGCTCAAGTTCAGGT+GGG | 0.559132 | 2.3:+13118202 | None:intergenic |
CACTCGAACAGTTCATGAGA+TGG | 0.560130 | 2.3:-13129220 | MS.gene35361:CDS |
TAAGGCTGAACACTTCATAC+AGG | 0.560962 | 2.3:-13122258 | MS.gene35361:CDS |
CAAGTCTTCCTGAGACAACA+AGG | 0.561435 | 2.3:+13116966 | None:intergenic |
GGCTTTGCATATTGCACGCG+AGG | 0.565169 | 2.3:-13118177 | MS.gene35361:intron |
GGAAACTGAGAATGTAGAGA+AGG | 0.576225 | 2.3:-13122198 | MS.gene35361:CDS |
TTATGGCAAGAGAAGCATCA+TGG | 0.585485 | 2.3:+13121782 | None:intergenic |
GCCCAGCCATATGATAAGAC+TGG | 0.587872 | 2.3:-13117006 | MS.gene35361:CDS |
CCTGAACTTGAGCACAGACA+TGG | 0.588397 | 2.3:-13118198 | MS.gene35361:CDS |
GGGCCGTGTAATCCGTTCAA+AGG | 0.589788 | 2.3:-13119027 | MS.gene35361:CDS |
AGACGAGGGTACAAATCTAT+GGG | 0.589941 | 2.3:+13121706 | None:intergenic |
ACGGAGTCTACCAGCATCTG+TGG | 0.593397 | 2.3:+13122499 | None:intergenic |
AGACTTGGGAATACCTGCCA+CGG | 0.594713 | 2.3:+13121605 | None:intergenic |
CGTTTGGGAAGGAGAAAGGG+TGG | 0.596059 | 2.3:-13127065 | MS.gene35361:CDS |
GATTAATGAAAGTAAAGCGA+TGG | 0.596397 | 2.3:+13129293 | None:intergenic |
TCTGCGAAGATACTTGCACT+TGG | 0.597638 | 2.3:-13129138 | MS.gene35361:CDS |
GCCTGATGATATACTAAAGG+AGG | 0.600840 | 2.3:-13122300 | MS.gene35361:CDS |
TAGAGAAAACAAAGCTAACA+GGG | 0.605030 | 2.3:+13122171 | None:intergenic |
GGTGGCTGCCATAATATCCA+AGG | 0.608556 | 2.3:-13126962 | MS.gene35361:CDS |
CACTTAGTGTGAGTGTGAGG+AGG | 0.610222 | 2.3:-13126873 | MS.gene35361:CDS |
GGCTCTTGACAACTACCGCA+AGG | 0.612315 | 2.3:-13121164 | MS.gene35361:CDS |
TATGGTCCAGTTTGCCAATG+TGG | 0.612340 | 2.3:-13127019 | MS.gene35361:CDS |
ATGGCATCAGTTGTTCCAGA+CGG | 0.612349 | 2.3:-13121405 | MS.gene35361:CDS |
AGACAAGCTGCACAGTGTGT+GGG | 0.614502 | 2.3:-13119047 | MS.gene35361:CDS |
TATCAAATTTGGTACTGACT+GGG | 0.616026 | 2.3:+13121478 | None:intergenic |
ATTCGGTTGATGCTGGGTGT+AGG | 0.619013 | 2.3:-13129056 | MS.gene35361:CDS |
CTTGTGGGCACATATGCTCG+TGG | 0.620806 | 2.3:-13122014 | MS.gene35361:CDS |
TGTACCTGGAAATATTCGTA+AGG | 0.620968 | 2.3:-13122276 | MS.gene35361:CDS |
GAAGTGATCTTGGCGTAGTG+AGG | 0.623766 | 2.3:-13121452 | MS.gene35361:CDS |
AGCATATGTGCCCACAAGTG+TGG | 0.625189 | 2.3:+13122019 | None:intergenic |
TACCTGCAAAGTATAAACAC+CGG | 0.628016 | 2.3:+13128924 | None:intergenic |
TTCCACAATCACAAGCCTTG+CGG | 0.634257 | 2.3:+13121149 | None:intergenic |
ATATTTGCTTGATCCAAAGG+TGG | 0.635144 | 2.3:-13126980 | MS.gene35361:CDS |
AAGCACTTAGTGTGAGTGTG+AGG | 0.636897 | 2.3:-13126876 | MS.gene35361:CDS |
AGTGCAAGTATCTTCGCAGA+CGG | 0.638387 | 2.3:+13129141 | None:intergenic |
GGGTTAAAATTCAGAAGACG+AGG | 0.638546 | 2.3:+13121691 | None:intergenic |
ACCTGCAAAGTATAAACACC+GGG | 0.640263 | 2.3:+13128925 | None:intergenic |
GGATCTGAGAACGTTTGGGA+AGG | 0.640793 | 2.3:-13127076 | MS.gene35361:CDS |
GACTTGGGAATACCTGCCAC+GGG | 0.642457 | 2.3:+13121606 | None:intergenic |
CTGGGTATATGTTGTCATAG+GGG | 0.642577 | 2.3:+13129403 | None:intergenic |
CTTTAGTATATCATCAGGCA+AGG | 0.643892 | 2.3:+13122304 | None:intergenic |
GCGTAGTGAGGAATTATGGA+CGG | 0.650573 | 2.3:-13121440 | MS.gene35361:CDS |
TAAAACTTCGACTGACAACA+GGG | 0.657372 | 2.3:+13121671 | None:intergenic |
GGTCCAGTTTGCCAATGTGG+TGG | 0.662911 | 2.3:-13127016 | MS.gene35361:CDS |
CAGCCATATGATAAGACTGG+TGG | 0.664280 | 2.3:-13117003 | MS.gene35361:CDS |
GGATGTGGTAGAAACTACAT+TGG | 0.665879 | 2.3:-13121185 | MS.gene35361:CDS |
CAAGCCTGTTGTATTCAGCA+CGG | 0.672490 | 2.3:+13122480 | None:intergenic |
TCGGCATTTCGAGTAAGCAG+TGG | 0.680977 | 2.3:+13129331 | None:intergenic |
ATAACTATAGACCACCACAT+TGG | 0.686192 | 2.3:+13127005 | None:intergenic |
TCATCATTAATGAATGAAGG+CGG | 0.703262 | 2.3:+13122099 | None:intergenic |
TGCCACGGGTAAGAACCATA+GGG | 0.717466 | 2.3:+13121620 | None:intergenic |
GGTTAAAATTCAGAAGACGA+GGG | 0.721307 | 2.3:+13121692 | None:intergenic |
AAATGAGAGAGTATCCAACC+AGG | 0.724017 | 2.3:+13118233 | None:intergenic |
TGCAAAGTATAAACACCGGG+AGG | 0.727085 | 2.3:+13128928 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 13116921 | 13129460 | 13116921 | ID=MS.gene35361 |
chr2.3 | mRNA | 13116921 | 13129460 | 13116921 | ID=MS.gene35361.t1;Parent=MS.gene35361 |
chr2.3 | exon | 13128927 | 13129460 | 13128927 | ID=MS.gene35361.t1.exon1;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13128927 | 13129460 | 13128927 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13126817 | 13127097 | 13126817 | ID=MS.gene35361.t1.exon2;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13126817 | 13127097 | 13126817 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13122447 | 13122529 | 13122447 | ID=MS.gene35361.t1.exon3;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13122447 | 13122529 | 13122447 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13121950 | 13122353 | 13121950 | ID=MS.gene35361.t1.exon4;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13121950 | 13122353 | 13121950 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13121619 | 13121812 | 13121619 | ID=MS.gene35361.t1.exon5;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13121619 | 13121812 | 13121619 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13121329 | 13121509 | 13121329 | ID=MS.gene35361.t1.exon6;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13121329 | 13121509 | 13121329 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13121121 | 13121245 | 13121121 | ID=MS.gene35361.t1.exon7;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13121121 | 13121245 | 13121121 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13119384 | 13119473 | 13119384 | ID=MS.gene35361.t1.exon8;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13119384 | 13119473 | 13119384 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13119175 | 13119253 | 13119175 | ID=MS.gene35361.t1.exon9;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13119175 | 13119253 | 13119175 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13118993 | 13119069 | 13118993 | ID=MS.gene35361.t1.exon10;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13118993 | 13119069 | 13118993 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13118178 | 13118286 | 13118178 | ID=MS.gene35361.t1.exon11;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13118178 | 13118286 | 13118178 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
chr2.3 | exon | 13116921 | 13117043 | 13116921 | ID=MS.gene35361.t1.exon12;Parent=MS.gene35361.t1 |
chr2.3 | CDS | 13116921 | 13117043 | 13116921 | ID=cds.MS.gene35361.t1;Parent=MS.gene35361.t1 |
Gene Sequence |
Protein sequence |