Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37927.t1 | XP_003602909.1 | 98 | 710 | 9 | 1 | 1 | 710 | 12 | 716 | 0.00E+00 | 1273.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37927.t1 | Q56X46 | 53.2 | 709 | 287 | 11 | 1 | 706 | 1 | 667 | 3.1e-186 | 653.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37927.t1 | G7J535 | 98.0 | 710 | 9 | 1 | 1 | 710 | 12 | 716 | 0.0e+00 | 1273.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene37927 | -0.810461 | 1.14E-50 | -1.69E-46 |
| MS.gene052153 | MS.gene37927 | 0.941578 | 3.26E-101 | -1.69E-46 |
| MS.gene052155 | MS.gene37927 | 0.979619 | 2.28E-148 | -1.69E-46 |
| MS.gene053144 | MS.gene37927 | -0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene053536 | MS.gene37927 | -0.808532 | 2.96E-50 | -1.69E-46 |
| MS.gene053538 | MS.gene37927 | -0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene05894 | MS.gene37927 | -0.83318 | 6.18E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37927.t1 | MTR_3g100280 | 98.028 | 710 | 9 | 1 | 1 | 710 | 12 | 716 | 0.0 | 1429 |
| MS.gene37927.t1 | MTR_3g100280 | 98.915 | 553 | 6 | 0 | 158 | 710 | 1 | 553 | 0.0 | 1128 |
| MS.gene37927.t1 | MTR_5g032090 | 54.144 | 724 | 279 | 13 | 1 | 694 | 1 | 701 | 0.0 | 751 |
| MS.gene37927.t1 | MTR_3g100320 | 62.176 | 579 | 204 | 8 | 1 | 574 | 1 | 569 | 0.0 | 712 |
| MS.gene37927.t1 | MTR_3g100320 | 63.309 | 417 | 148 | 5 | 1 | 416 | 13 | 425 | 0.0 | 545 |
| MS.gene37927.t1 | MTR_3g100300 | 37.799 | 209 | 78 | 9 | 312 | 510 | 133 | 299 | 4.58e-20 | 92.4 |
| MS.gene37927.t1 | MTR_3g099260 | 42.697 | 89 | 48 | 2 | 335 | 423 | 76 | 161 | 3.09e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37927.t1 | AT1G58200 | 55.489 | 665 | 272 | 11 | 27 | 682 | 26 | 675 | 0.0 | 726 |
| MS.gene37927.t1 | AT1G58200 | 55.489 | 665 | 272 | 11 | 27 | 682 | 26 | 675 | 0.0 | 726 |
| MS.gene37927.t1 | AT5G10490 | 54.902 | 714 | 267 | 14 | 1 | 706 | 1 | 667 | 0.0 | 720 |
| MS.gene37927.t1 | AT5G10490 | 56.324 | 680 | 245 | 13 | 35 | 706 | 4 | 639 | 0.0 | 716 |
| MS.gene37927.t1 | AT5G10490 | 56.122 | 686 | 249 | 13 | 29 | 706 | 24 | 665 | 0.0 | 716 |
| MS.gene37927.t1 | AT4G00290 | 26.291 | 213 | 141 | 6 | 250 | 454 | 286 | 490 | 4.37e-12 | 69.7 |
Find 161 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTGCCTTTGCTGTTTA+TGG | 0.117984 | 3.3:+83235960 | MS.gene37927:CDS |
| TGCAAAATTCTCATCACTTT+TGG | 0.160964 | 3.3:-83240275 | None:intergenic |
| ATTGAGGGGTATGAGGTTTC+TGG | 0.210367 | 3.3:+83237881 | MS.gene37927:CDS |
| TCTTCACCATTAACTTTATA+CGG | 0.230735 | 3.3:-83240172 | None:intergenic |
| GTCTGAGATGGCAGGATTAT+TGG | 0.231716 | 3.3:-83236321 | None:intergenic |
| TCCTTGGAGTTTACACTAGA+TGG | 0.266948 | 3.3:-83240313 | None:intergenic |
| AAGAAGAATATTCTCTTCTA+AGG | 0.269634 | 3.3:-83240620 | None:intergenic |
| ATCCACTCATTCAATATAAA+TGG | 0.277217 | 3.3:-83237848 | None:intergenic |
| GGAATCAATCGAAGCAAAAT+AGG | 0.284248 | 3.3:-83235927 | None:intergenic |
| GAACCACCGTATAAAGTTAA+TGG | 0.285284 | 3.3:+83240166 | MS.gene37927:CDS |
| TTATTGCCTTTGCTGTTTAT+GGG | 0.298393 | 3.3:+83235961 | MS.gene37927:CDS |
| TAGGTCATATGATTCTTTAT+TGG | 0.307183 | 3.3:+83235899 | MS.gene37927:intron |
| CTAGATGGCGCATGCCTTGT+TGG | 0.308296 | 3.3:-83234253 | None:intergenic |
| AGCTGATATGCGCAAGGTTT+TGG | 0.309117 | 3.3:+83238382 | MS.gene37927:CDS |
| TGCTGCTGTGTCATTATTCA+TGG | 0.310689 | 3.3:+83237476 | MS.gene37927:CDS |
| TGGTTAACTGCTGGTGGTTT+GGG | 0.312167 | 3.3:+83237525 | MS.gene37927:CDS |
| TTAGAAGAGAATATTCTTCT+TGG | 0.319652 | 3.3:+83240622 | MS.gene37927:CDS |
| AACTATCAGAACCCATGTTC+TGG | 0.320526 | 3.3:-83240366 | None:intergenic |
| CTTCTTGGGGTTGCACTTGA+AGG | 0.322534 | 3.3:+83240637 | MS.gene37927:CDS |
| TGCTCTGGATCGAGTGAAAA+TGG | 0.324671 | 3.3:-83240116 | None:intergenic |
| GAAACAGGAGGCAATCCTTT+TGG | 0.327663 | 3.3:+83239985 | MS.gene37927:intron |
| TCCGGATGGGAGTGGCTAAC+CGG | 0.331872 | 3.3:-83240039 | None:intergenic |
| TAGATGGCGCATGCCTTGTT+GGG | 0.335717 | 3.3:-83234252 | None:intergenic |
| TAGAAGAGAATATTCTTCTT+GGG | 0.339763 | 3.3:+83240623 | MS.gene37927:CDS |
| AGCAATATACACTGCTGTTT+GGG | 0.342027 | 3.3:+83237452 | MS.gene37927:CDS |
| AAGCAATATACACTGCTGTT+TGG | 0.345518 | 3.3:+83237451 | MS.gene37927:CDS |
| ATGTCGCTCTGCCATCCTAC+TGG | 0.346764 | 3.3:+83234291 | MS.gene37927:CDS |
| AGGTCATATGATTCTTTATT+GGG | 0.349745 | 3.3:+83235900 | MS.gene37927:intron |
| AGGCTCAAAACTAGTAATAA+TGG | 0.353567 | 3.3:+83233835 | MS.gene37927:CDS |
| CGGGCGATTCACTGCTGCTC+TGG | 0.357040 | 3.3:-83240131 | None:intergenic |
| CAGCCATTATTATTGTGGAC+TGG | 0.362516 | 3.3:+83236196 | MS.gene37927:CDS |
| GGATTCATTTCTTCCTCAAT+TGG | 0.382478 | 3.3:-83240676 | None:intergenic |
| CCTCGGAAAATATACCCTTT+GGG | 0.382562 | 3.3:+83240089 | MS.gene37927:CDS |
| ACGATCATCACCTCTAATAA+TGG | 0.384373 | 3.3:-83238121 | None:intergenic |
| GCCTCGGAAAATATACCCTT+TGG | 0.385437 | 3.3:+83240088 | MS.gene37927:CDS |
| GCCCCAGTCCACAATAATAA+TGG | 0.387380 | 3.3:-83236199 | None:intergenic |
| CTACTGGGTGGTGGAGGGAG+TGG | 0.387489 | 3.3:+83234307 | MS.gene37927:CDS |
| TCTTGTGACTCAGCCGAGTT+AGG | 0.388980 | 3.3:-83240703 | None:intergenic |
| ACAGTATTGCTCACTCTTGC+CGG | 0.390378 | 3.3:+83237549 | MS.gene37927:CDS |
| GACTCATGGTTAGTAATAAC+AGG | 0.390821 | 3.3:-83240508 | None:intergenic |
| GTGGTTAACTGCTGGTGGTT+TGG | 0.396659 | 3.3:+83237524 | MS.gene37927:CDS |
| TGAGGAGTACCTTTGTGTTA+AGG | 0.398606 | 3.3:+83239197 | MS.gene37927:CDS |
| ACATACATTTCTTGCATCAC+TGG | 0.405151 | 3.3:-83237048 | None:intergenic |
| TTGACAGTGAACTTGTGATT+AGG | 0.406344 | 3.3:-83238159 | None:intergenic |
| AGCCATTATTATTGTGGACT+GGG | 0.408214 | 3.3:+83236197 | MS.gene37927:CDS |
| GCCATCCTACTGGGTGGTGG+AGG | 0.413508 | 3.3:+83234301 | MS.gene37927:CDS |
| TCCTTCTTATCTTTGTTAGC+AGG | 0.413944 | 3.3:-83240757 | None:intergenic |
| CTTTGACTTGGACTTATCCT+TGG | 0.417001 | 3.3:-83240329 | None:intergenic |
| CATTTGCTTACTGTTTATCA+AGG | 0.428109 | 3.3:+83236403 | MS.gene37927:CDS |
| ATATAAATGGCCGAGTTGTA+TGG | 0.432347 | 3.3:-83237835 | None:intergenic |
| CCACGAGTTGAACGAGTTGA+CGG | 0.433490 | 3.3:-83240205 | None:intergenic |
| CAACAAGGCATGCGCCATCT+AGG | 0.438226 | 3.3:+83234254 | MS.gene37927:CDS |
| AACAAAGATTGAGGGGTATG+AGG | 0.439911 | 3.3:+83237874 | MS.gene37927:CDS |
| AGCCACTACTTCGTCTCAGC+AGG | 0.445866 | 3.3:+83235988 | MS.gene37927:CDS |
| ACTATCAGAACCCATGTTCT+GGG | 0.446447 | 3.3:-83240365 | None:intergenic |
| TACTGGGTGGTGGAGGGAGT+GGG | 0.447642 | 3.3:+83234308 | MS.gene37927:CDS |
| TCCTGAAAACACAGCTCTAA+AGG | 0.450592 | 3.3:+83238466 | MS.gene37927:CDS |
| TTACTAACCATGAGTCTAGC+AGG | 0.459792 | 3.3:+83240515 | MS.gene37927:CDS |
| TCATTATTCATGGAGTTGCT+AGG | 0.467872 | 3.3:+83237486 | MS.gene37927:CDS |
| CTTCGATTGATTCCAGCCCT+TGG | 0.468132 | 3.3:+83235936 | MS.gene37927:CDS |
| CGAGAAAATTGCATAGAACC+TGG | 0.470723 | 3.3:-83233805 | None:intergenic |
| GCATTTGGAAATGAAGAGGT+TGG | 0.471934 | 3.3:-83240784 | None:intergenic |
| TTGCTTTCCCAGCAAAATCA+AGG | 0.476830 | 3.3:-83237434 | None:intergenic |
| TGGTCACCAACCATTATTAG+AGG | 0.477341 | 3.3:+83238111 | MS.gene37927:CDS |
| CCATCCTACTGGGTGGTGGA+GGG | 0.481947 | 3.3:+83234302 | MS.gene37927:CDS |
| CCCGGTTAGCCACTCCCATC+CGG | 0.482156 | 3.3:+83240038 | MS.gene37927:CDS |
| GAGTTTGCTGTCCAACGGAA+TGG | 0.486188 | 3.3:+83240724 | MS.gene37927:CDS |
| TCCTGCTAACAAAGATAAGA+AGG | 0.488760 | 3.3:+83240756 | MS.gene37927:CDS |
| TACATGATGCTGAAAACTAC+GGG | 0.491533 | 3.3:-83233860 | None:intergenic |
| ATCTGACTCAGAAATCTCAT+TGG | 0.494433 | 3.3:+83238193 | MS.gene37927:CDS |
| TATGGATCATTATACTTGAA+AGG | 0.495848 | 3.3:-83237817 | None:intergenic |
| AATTTCTGTTGCTCCACTTG+AGG | 0.495916 | 3.3:-83238413 | None:intergenic |
| ACTGCAGAAGATGTAGGAAA+AGG | 0.496072 | 3.3:+83240430 | MS.gene37927:CDS |
| GAATCAATCGAAGCAAAATA+GGG | 0.497586 | 3.3:-83235926 | None:intergenic |
| CCGGATGGGAGTGGCTAACC+GGG | 0.500022 | 3.3:-83240038 | None:intergenic |
| TTCTTATCTTTGTTAGCAGG+AGG | 0.502177 | 3.3:-83240754 | None:intergenic |
| GTGGTTCTATTAGTAAGAAC+GGG | 0.504498 | 3.3:-83240150 | None:intergenic |
| AGTTTGCTGTCCAACGGAAT+GGG | 0.505163 | 3.3:+83240725 | MS.gene37927:CDS |
| CCTGCCATCTCAGACTAGTC+AGG | 0.507836 | 3.3:+83236329 | MS.gene37927:CDS |
| TGAGGTTTCTGGCACAGTTG+AGG | 0.511851 | 3.3:+83237892 | MS.gene37927:CDS |
| CAACTCTGAGAAGATCCAAA+AGG | 0.513442 | 3.3:-83240000 | None:intergenic |
| GCTGTCCAACGGAATGGGAA+TGG | 0.514341 | 3.3:+83240730 | MS.gene37927:CDS |
| GGCCATTTATATTGAATGAG+TGG | 0.514735 | 3.3:+83237846 | MS.gene37927:CDS |
| CTGAACTGTCCGGATGGGAG+TGG | 0.519563 | 3.3:-83240047 | None:intergenic |
| TCTGCCATCCTACTGGGTGG+TGG | 0.520406 | 3.3:+83234298 | MS.gene37927:CDS |
| TTGAGCATCAGACTTTGACT+TGG | 0.526242 | 3.3:-83240341 | None:intergenic |
| TTACATTTCTATCAGTCACT+TGG | 0.527731 | 3.3:+83238227 | MS.gene37927:CDS |
| TTCAGAGGACTGACAGCAGT+TGG | 0.529245 | 3.3:+83236134 | MS.gene37927:intron |
| GCAAGATGAAGAGAAATCTT+CGG | 0.529586 | 3.3:+83240573 | MS.gene37927:CDS |
| TGTCGCTCTGCCATCCTACT+GGG | 0.531925 | 3.3:+83234292 | MS.gene37927:CDS |
| CTGGGGCAATGCTCATATGC+AGG | 0.532365 | 3.3:+83236215 | MS.gene37927:CDS |
| TGGATTCAAACAAAGATTGA+GGG | 0.532585 | 3.3:+83237866 | MS.gene37927:CDS |
| TCAGAAACTACACTATGTGC+AGG | 0.532696 | 3.3:-83240478 | None:intergenic |
| GTGGATTCAAACAAAGATTG+AGG | 0.532984 | 3.3:+83237865 | MS.gene37927:CDS |
| TGATGCTCAAACCCAGAACA+TGG | 0.533483 | 3.3:+83240354 | MS.gene37927:CDS |
| CTCGGAAAATATACCCTTTG+GGG | 0.533597 | 3.3:+83240090 | MS.gene37927:CDS |
| CATTTGACAGAATCCGGCGC+GGG | 0.537802 | 3.3:+83233974 | MS.gene37927:intron |
| GAGGTCCATTCCCATTCCGT+TGG | 0.538198 | 3.3:-83240735 | None:intergenic |
| AGCAACAGAAATTGCACAGA+AGG | 0.539152 | 3.3:+83238423 | MS.gene37927:CDS |
| CGTGTACTCCACGTAAAAGA+TGG | 0.539288 | 3.3:-83234228 | None:intergenic |
| CTTAGCATTTGGAAATGAAG+AGG | 0.540708 | 3.3:-83240788 | None:intergenic |
| GACTCAGCCGAGTTAGGAGA+TGG | 0.546014 | 3.3:-83240697 | None:intergenic |
| AAAGAAACTGCAGAAGATGT+AGG | 0.549434 | 3.3:+83240424 | MS.gene37927:CDS |
| TGACAGAATCCGGCGCGGGT+TGG | 0.555558 | 3.3:+83233978 | MS.gene37927:intron |
| TTGTCAGTCATCATCGAGCC+CGG | 0.555870 | 3.3:+83240020 | MS.gene37927:CDS |
| AGAAGAGAATATTCTTCTTG+GGG | 0.555945 | 3.3:+83240624 | MS.gene37927:CDS |
| TGTCTGCCCTGCTAGACTCA+TGG | 0.556999 | 3.3:-83240522 | None:intergenic |
| AAGGCAATAATACCAAGGGC+TGG | 0.559924 | 3.3:-83235948 | None:intergenic |
| GTGAAAATGGAATCCCCAAA+GGG | 0.563083 | 3.3:-83240103 | None:intergenic |
| TGTAATCGTCCAACCCGCGC+CGG | 0.565322 | 3.3:-83233987 | None:intergenic |
| AGAATATTCTCTTCTAAGGG+AGG | 0.566683 | 3.3:-83240616 | None:intergenic |
| TGCCACAGGTTCATCAACCT+TGG | 0.570082 | 3.3:-83240245 | None:intergenic |
| ATACATGATGCTGAAAACTA+CGG | 0.570217 | 3.3:-83233861 | None:intergenic |
| CCCTCCACCACCCAGTAGGA+TGG | 0.571175 | 3.3:-83234302 | None:intergenic |
| AGAAGAATATTCTCTTCTAA+GGG | 0.571417 | 3.3:-83240619 | None:intergenic |
| GGAGGTTTAACTGCTGATGA+TGG | 0.571460 | 3.3:-83240598 | None:intergenic |
| CACAAGAGTTTGCTGTCCAA+CGG | 0.571868 | 3.3:+83240719 | MS.gene37927:CDS |
| CAGAAACTACACTATGTGCA+GGG | 0.572356 | 3.3:-83240477 | None:intergenic |
| AATATACAGTGAGCCTGCCT+CGG | 0.575648 | 3.3:+83240072 | MS.gene37927:CDS |
| ACACAGAAGTGGTTAACTGC+TGG | 0.580779 | 3.3:+83237516 | MS.gene37927:CDS |
| GCTAACAAAGATAAGAAGGA+TGG | 0.580826 | 3.3:+83240760 | MS.gene37927:CDS |
| GGTGGTTCTATTAGTAAGAA+CGG | 0.584350 | 3.3:-83240151 | None:intergenic |
| ATTTCAACAATGGCGTACCC+AGG | 0.586378 | 3.3:+83233787 | None:intergenic |
| ACAGTGGTGTACCTCTCGAC+CGG | 0.589587 | 3.3:-83237568 | None:intergenic |
| AGATGGCGCATGCCTTGTTG+GGG | 0.590773 | 3.3:-83234251 | None:intergenic |
| TCCATCTAGTGTAAACTCCA+AGG | 0.591305 | 3.3:+83240312 | MS.gene37927:CDS |
| AGTGCGCGGTAAAAGATTCG+TGG | 0.592576 | 3.3:-83234018 | None:intergenic |
| CCGTCAACTCGTTCAACTCG+TGG | 0.592850 | 3.3:+83240205 | MS.gene37927:CDS |
| CCTGACTAGTCTGAGATGGC+AGG | 0.593866 | 3.3:-83236329 | None:intergenic |
| GCCATTATTATTGTGGACTG+GGG | 0.594152 | 3.3:+83236198 | MS.gene37927:CDS |
| TCATCACCTCTAATAATGGT+TGG | 0.596112 | 3.3:-83238117 | None:intergenic |
| CTCAATCCCATAAACAGCAA+AGG | 0.602491 | 3.3:-83235967 | None:intergenic |
| GCTCACTCTTGCCGGTCGAG+AGG | 0.602784 | 3.3:+83237557 | MS.gene37927:CDS |
| AATGAATCCATCTCCTAACT+CGG | 0.604421 | 3.3:+83240690 | MS.gene37927:CDS |
| TAGGTTTCTCCACACAGAAG+TGG | 0.609034 | 3.3:+83237505 | MS.gene37927:CDS |
| TATTGTAGCTGATATGCGCA+AGG | 0.609834 | 3.3:+83238376 | MS.gene37927:CDS |
| CAGAAGTGGTTAACTGCTGG+TGG | 0.614907 | 3.3:+83237519 | MS.gene37927:CDS |
| ACGACCTGACTAGTCTGAGA+TGG | 0.620289 | 3.3:-83236333 | None:intergenic |
| ATCCTGCTGAGACGAAGTAG+TGG | 0.624352 | 3.3:-83235990 | None:intergenic |
| CACTCCCTCCACCACCCAGT+AGG | 0.627013 | 3.3:-83234306 | None:intergenic |
| AGCAAAGGCAATAATACCAA+GGG | 0.628101 | 3.3:-83235952 | None:intergenic |
| TCGTTCAACTCGTGGCAATG+AGG | 0.629437 | 3.3:+83240213 | MS.gene37927:CDS |
| CATGGGTTCTGATAGTTCAG+TGG | 0.631810 | 3.3:+83240372 | MS.gene37927:CDS |
| TACTAACCATGAGTCTAGCA+GGG | 0.636326 | 3.3:+83240516 | MS.gene37927:CDS |
| GCAACAGAAATTGCACAGAA+GGG | 0.640894 | 3.3:+83238424 | MS.gene37927:CDS |
| CAGCAAAGGCAATAATACCA+AGG | 0.642606 | 3.3:-83235953 | None:intergenic |
| AGTGAAAATGGAATCCCCAA+AGG | 0.643663 | 3.3:-83240104 | None:intergenic |
| GTGGAGTACACGCCCCAACA+AGG | 0.646133 | 3.3:+83234239 | MS.gene37927:CDS |
| GAGAAAATTGCATAGAACCT+GGG | 0.649314 | 3.3:-83233804 | None:intergenic |
| GATGCTCAAACCCAGAACAT+GGG | 0.655040 | 3.3:+83240355 | MS.gene37927:CDS |
| TATTAGAGGTGATGATCGTG+AGG | 0.660808 | 3.3:+83238125 | MS.gene37927:CDS |
| TCACCATTAACTTTATACGG+TGG | 0.661817 | 3.3:-83240169 | None:intergenic |
| CGCTCTGCCATCCTACTGGG+TGG | 0.662659 | 3.3:+83234295 | MS.gene37927:CDS |
| AGAAACTACACTATGTGCAG+GGG | 0.663314 | 3.3:-83240476 | None:intergenic |
| AGTACTTTACCTTAACACAA+AGG | 0.665075 | 3.3:-83239206 | None:intergenic |
| GGATTCAAACAAAGATTGAG+GGG | 0.668904 | 3.3:+83237867 | MS.gene37927:CDS |
| GTATAATGATCCATACAACT+CGG | 0.679127 | 3.3:+83237825 | MS.gene37927:CDS |
| AGCAGTTAACCACTTCTGTG+TGG | 0.686421 | 3.3:-83237514 | None:intergenic |
| TGCCAAGGTTGATGAACCTG+TGG | 0.690105 | 3.3:+83240243 | MS.gene37927:CDS |
| TCATTTGACAGAATCCGGCG+CGG | 0.715427 | 3.3:+83233973 | MS.gene37927:intron |
| ACATGATGCTGAAAACTACG+GGG | 0.789598 | 3.3:-83233859 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 83233796 | 83240822 | 83233796 | ID=MS.gene37927 |
| chr3.3 | mRNA | 83233796 | 83240822 | 83233796 | ID=MS.gene37927.t1;Parent=MS.gene37927 |
| chr3.3 | exon | 83233796 | 83233879 | 83233796 | ID=MS.gene37927.t1.exon1;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83233796 | 83233879 | 83233796 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83233984 | 83234043 | 83233984 | ID=MS.gene37927.t1.exon2;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83233984 | 83234043 | 83233984 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83234208 | 83234368 | 83234208 | ID=MS.gene37927.t1.exon3;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83234208 | 83234368 | 83234208 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83235902 | 83236025 | 83235902 | ID=MS.gene37927.t1.exon4;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83235902 | 83236025 | 83235902 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83236139 | 83236236 | 83236139 | ID=MS.gene37927.t1.exon5;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83236139 | 83236236 | 83236139 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83236311 | 83236424 | 83236311 | ID=MS.gene37927.t1.exon6;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83236311 | 83236424 | 83236311 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83237004 | 83237064 | 83237004 | ID=MS.gene37927.t1.exon7;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83237004 | 83237064 | 83237004 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83237429 | 83237578 | 83237429 | ID=MS.gene37927.t1.exon8;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83237429 | 83237578 | 83237429 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83237803 | 83237913 | 83237803 | ID=MS.gene37927.t1.exon9;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83237803 | 83237913 | 83237803 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83238099 | 83238266 | 83238099 | ID=MS.gene37927.t1.exon10;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83238099 | 83238266 | 83238099 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83238374 | 83238487 | 83238374 | ID=MS.gene37927.t1.exon11;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83238374 | 83238487 | 83238374 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83239162 | 83239218 | 83239162 | ID=MS.gene37927.t1.exon12;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83239162 | 83239218 | 83239162 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| chr3.3 | exon | 83239992 | 83240822 | 83239992 | ID=MS.gene37927.t1.exon13;Parent=MS.gene37927.t1 |
| chr3.3 | CDS | 83239992 | 83240822 | 83239992 | ID=cds.MS.gene37927.t1;Parent=MS.gene37927.t1 |
| Gene Sequence |
| Protein sequence |
