Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38187.t1 | XP_003620957.1 | 75.6 | 258 | 25 | 3 | 1 | 222 | 1 | 256 | 1.70E-84 | 322.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38187.t1 | Q9FY93 | 74.8 | 155 | 35 | 2 | 9 | 161 | 8 | 160 | 2.5e-65 | 250.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38187.t1 | G7KVL9 | 75.6 | 258 | 25 | 3 | 1 | 222 | 1 | 256 | 1.2e-84 | 322.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene38187.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051710 | MS.gene38187 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene059276 | MS.gene38187 | 0.805767 | 1.14E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38187.t1 | MTR_7g005280 | 77.907 | 258 | 19 | 7 | 1 | 222 | 1 | 256 | 1.38e-129 | 365 |
| MS.gene38187.t1 | MTR_8g099750 | 55.000 | 200 | 74 | 6 | 1 | 190 | 1 | 194 | 1.19e-69 | 213 |
| MS.gene38187.t1 | MTR_3g098810 | 52.336 | 214 | 83 | 5 | 1 | 196 | 1 | 213 | 2.17e-68 | 210 |
| MS.gene38187.t1 | MTR_7g070140 | 68.098 | 163 | 12 | 3 | 60 | 222 | 12 | 134 | 3.20e-67 | 203 |
| MS.gene38187.t1 | MTR_3g098810 | 61.842 | 152 | 56 | 2 | 1 | 151 | 1 | 151 | 2.08e-62 | 192 |
| MS.gene38187.t1 | MTR_7g085220 | 51.705 | 176 | 70 | 3 | 12 | 172 | 5 | 180 | 3.32e-58 | 187 |
| MS.gene38187.t1 | MTR_4g081870 | 53.297 | 182 | 70 | 5 | 7 | 177 | 1 | 178 | 1.95e-57 | 183 |
| MS.gene38187.t1 | MTR_2g080010 | 54.190 | 179 | 63 | 4 | 1 | 162 | 1 | 177 | 1.33e-56 | 183 |
| MS.gene38187.t1 | MTR_4g089135 | 54.494 | 178 | 50 | 4 | 14 | 162 | 14 | 189 | 7.46e-56 | 181 |
| MS.gene38187.t1 | MTR_5g041940 | 57.233 | 159 | 54 | 3 | 13 | 161 | 1 | 155 | 8.18e-56 | 178 |
| MS.gene38187.t1 | MTR_7g070150 | 89.474 | 95 | 7 | 2 | 103 | 197 | 1 | 92 | 1.43e-54 | 169 |
| MS.gene38187.t1 | MTR_2157s0010 | 54.601 | 163 | 58 | 4 | 15 | 162 | 8 | 169 | 5.34e-54 | 174 |
| MS.gene38187.t1 | MTR_7g100990 | 53.659 | 164 | 62 | 5 | 7 | 158 | 1 | 162 | 1.43e-53 | 175 |
| MS.gene38187.t1 | MTR_3g109340 | 49.721 | 179 | 82 | 4 | 4 | 176 | 9 | 185 | 1.15e-52 | 173 |
| MS.gene38187.t1 | MTR_3g088110 | 52.273 | 176 | 70 | 3 | 12 | 178 | 4 | 174 | 1.99e-52 | 171 |
| MS.gene38187.t1 | MTR_3g109340 | 49.444 | 180 | 82 | 4 | 4 | 176 | 9 | 186 | 2.25e-52 | 172 |
| MS.gene38187.t1 | MTR_1g008740 | 51.429 | 175 | 77 | 4 | 12 | 180 | 10 | 182 | 2.91e-52 | 172 |
| MS.gene38187.t1 | MTR_1g008740 | 51.429 | 175 | 77 | 4 | 12 | 180 | 24 | 196 | 3.04e-52 | 172 |
| MS.gene38187.t1 | MTR_3g064580 | 56.604 | 159 | 56 | 3 | 13 | 162 | 4 | 158 | 4.41e-52 | 178 |
| MS.gene38187.t1 | MTR_2g093810 | 53.247 | 154 | 60 | 3 | 15 | 158 | 14 | 165 | 1.37e-51 | 169 |
| MS.gene38187.t1 | MTR_6g084430 | 50.898 | 167 | 74 | 3 | 12 | 174 | 2 | 164 | 5.53e-51 | 168 |
| MS.gene38187.t1 | MTR_2g064090 | 51.572 | 159 | 64 | 3 | 13 | 162 | 4 | 158 | 8.67e-51 | 168 |
| MS.gene38187.t1 | MTR_5g021710 | 46.277 | 188 | 90 | 4 | 12 | 192 | 5 | 188 | 1.41e-50 | 168 |
| MS.gene38187.t1 | MTR_2g062730 | 50.307 | 163 | 71 | 3 | 6 | 161 | 1 | 160 | 1.55e-50 | 167 |
| MS.gene38187.t1 | MTR_4g035590 | 56.494 | 154 | 55 | 5 | 15 | 161 | 8 | 156 | 1.63e-50 | 167 |
| MS.gene38187.t1 | MTR_4g108760 | 50.581 | 172 | 71 | 5 | 1 | 162 | 1 | 168 | 2.26e-50 | 167 |
| MS.gene38187.t1 | MTR_2g079990 | 51.445 | 173 | 74 | 3 | 11 | 177 | 12 | 180 | 5.54e-50 | 166 |
| MS.gene38187.t1 | MTR_3g435150 | 50.292 | 171 | 72 | 4 | 1 | 162 | 1 | 167 | 6.58e-50 | 165 |
| MS.gene38187.t1 | MTR_4g036030 | 53.247 | 154 | 61 | 4 | 15 | 161 | 7 | 156 | 7.24e-50 | 166 |
| MS.gene38187.t1 | MTR_8g076110 | 51.220 | 164 | 68 | 5 | 15 | 171 | 6 | 164 | 1.27e-49 | 164 |
| MS.gene38187.t1 | MTR_8g094580 | 45.622 | 217 | 92 | 8 | 11 | 216 | 3 | 204 | 1.40e-49 | 163 |
| MS.gene38187.t1 | MTR_8g059170 | 47.248 | 218 | 84 | 7 | 12 | 216 | 11 | 210 | 1.71e-49 | 164 |
| MS.gene38187.t1 | MTR_7g085260 | 50.000 | 174 | 78 | 4 | 13 | 178 | 15 | 187 | 1.98e-49 | 166 |
| MS.gene38187.t1 | MTR_5g076850 | 53.049 | 164 | 65 | 4 | 13 | 168 | 4 | 163 | 3.22e-49 | 170 |
| MS.gene38187.t1 | MTR_4g101680 | 50.617 | 162 | 69 | 3 | 14 | 168 | 6 | 163 | 6.08e-49 | 164 |
| MS.gene38187.t1 | MTR_1g069805 | 44.175 | 206 | 107 | 4 | 15 | 215 | 10 | 212 | 6.12e-49 | 161 |
| MS.gene38187.t1 | MTR_5g012080 | 48.171 | 164 | 74 | 3 | 14 | 169 | 6 | 166 | 8.48e-49 | 163 |
| MS.gene38187.t1 | MTR_6g032770 | 49.390 | 164 | 73 | 3 | 13 | 168 | 16 | 177 | 1.33e-48 | 163 |
| MS.gene38187.t1 | MTR_3g096920 | 50.829 | 181 | 73 | 7 | 11 | 182 | 3 | 176 | 2.76e-48 | 160 |
| MS.gene38187.t1 | MTR_3g070030 | 50.000 | 174 | 72 | 5 | 5 | 168 | 9 | 177 | 4.02e-48 | 161 |
| MS.gene38187.t1 | MTR_6g012670 | 48.276 | 174 | 71 | 5 | 4 | 162 | 2 | 171 | 4.88e-48 | 160 |
| MS.gene38187.t1 | MTR_2g078700 | 51.572 | 159 | 67 | 3 | 12 | 162 | 20 | 176 | 7.96e-48 | 161 |
| MS.gene38187.t1 | MTR_1g096430 | 50.318 | 157 | 67 | 3 | 12 | 161 | 4 | 156 | 8.52e-48 | 160 |
| MS.gene38187.t1 | MTR_6g477900 | 46.023 | 176 | 81 | 4 | 13 | 178 | 4 | 175 | 1.79e-47 | 156 |
| MS.gene38187.t1 | MTR_5g090970 | 45.024 | 211 | 90 | 6 | 8 | 204 | 12 | 210 | 9.89e-47 | 157 |
| MS.gene38187.t1 | MTR_8g024480 | 47.059 | 170 | 68 | 3 | 10 | 161 | 10 | 175 | 2.81e-46 | 159 |
| MS.gene38187.t1 | MTR_5g090970 | 44.811 | 212 | 90 | 6 | 8 | 204 | 12 | 211 | 3.75e-46 | 155 |
| MS.gene38187.t1 | MTR_7g097090 | 51.351 | 148 | 66 | 3 | 15 | 159 | 10 | 154 | 7.15e-46 | 154 |
| MS.gene38187.t1 | MTR_8g467490 | 38.710 | 248 | 116 | 6 | 1 | 215 | 1 | 245 | 9.13e-46 | 156 |
| MS.gene38187.t1 | MTR_2g079990 | 44.279 | 201 | 74 | 3 | 11 | 177 | 12 | 208 | 1.22e-45 | 155 |
| MS.gene38187.t1 | MTR_2g064470 | 44.076 | 211 | 84 | 9 | 12 | 212 | 8 | 194 | 1.71e-45 | 153 |
| MS.gene38187.t1 | MTR_5g040420 | 46.154 | 182 | 81 | 4 | 1 | 168 | 1 | 179 | 2.07e-45 | 155 |
| MS.gene38187.t1 | MTR_5g014300 | 47.170 | 159 | 76 | 2 | 11 | 161 | 2 | 160 | 4.17e-45 | 153 |
| MS.gene38187.t1 | MTR_3g093040 | 47.468 | 158 | 71 | 3 | 13 | 162 | 106 | 259 | 5.67e-45 | 152 |
| MS.gene38187.t1 | MTR_3g116070 | 53.061 | 147 | 63 | 4 | 8 | 150 | 16 | 160 | 8.77e-45 | 153 |
| MS.gene38187.t1 | MTR_2g068880 | 39.545 | 220 | 111 | 4 | 1 | 202 | 9 | 224 | 2.59e-44 | 150 |
| MS.gene38187.t1 | MTR_4g098630 | 47.647 | 170 | 76 | 4 | 15 | 176 | 6 | 170 | 8.63e-44 | 149 |
| MS.gene38187.t1 | MTR_2g068920 | 43.094 | 181 | 84 | 3 | 6 | 168 | 13 | 192 | 1.32e-43 | 148 |
| MS.gene38187.t1 | MTR_7g011130 | 54.015 | 137 | 54 | 3 | 9 | 141 | 13 | 144 | 1.54e-43 | 149 |
| MS.gene38187.t1 | MTR_3g093050 | 48.447 | 161 | 71 | 3 | 15 | 167 | 22 | 178 | 1.68e-43 | 154 |
| MS.gene38187.t1 | MTR_7g011120 | 48.521 | 169 | 66 | 5 | 9 | 161 | 2 | 165 | 1.70e-43 | 148 |
| MS.gene38187.t1 | MTR_5g069030 | 48.555 | 173 | 70 | 4 | 14 | 178 | 24 | 185 | 2.29e-43 | 154 |
| MS.gene38187.t1 | MTR_3g093050 | 48.447 | 161 | 71 | 3 | 15 | 167 | 22 | 178 | 2.29e-43 | 154 |
| MS.gene38187.t1 | MTR_3g096920 | 56.618 | 136 | 51 | 3 | 11 | 143 | 3 | 133 | 1.87e-42 | 146 |
| MS.gene38187.t1 | MTR_6g011860 | 45.198 | 177 | 79 | 4 | 1 | 162 | 1 | 174 | 2.26e-42 | 147 |
| MS.gene38187.t1 | MTR_3g070040 | 45.882 | 170 | 75 | 3 | 9 | 168 | 2 | 164 | 1.13e-41 | 144 |
| MS.gene38187.t1 | MTR_1g090720 | 50.920 | 163 | 60 | 4 | 15 | 162 | 42 | 199 | 9.93e-41 | 145 |
| MS.gene38187.t1 | MTR_3g096140 | 47.742 | 155 | 63 | 5 | 18 | 161 | 10 | 157 | 1.94e-40 | 139 |
| MS.gene38187.t1 | MTR_2g086880 | 44.242 | 165 | 80 | 3 | 18 | 178 | 21 | 177 | 7.23e-40 | 143 |
| MS.gene38187.t1 | MTR_2g086880 | 44.242 | 165 | 80 | 3 | 18 | 178 | 21 | 177 | 9.23e-40 | 144 |
| MS.gene38187.t1 | MTR_3g096140 | 45.614 | 171 | 72 | 6 | 18 | 177 | 10 | 170 | 1.46e-39 | 139 |
| MS.gene38187.t1 | MTR_4g075980 | 43.636 | 165 | 84 | 5 | 1 | 162 | 4 | 162 | 3.23e-38 | 134 |
| MS.gene38187.t1 | MTR_8g023840 | 46.667 | 150 | 69 | 5 | 15 | 158 | 11 | 155 | 6.11e-38 | 136 |
| MS.gene38187.t1 | MTR_1g090723 | 47.403 | 154 | 68 | 4 | 18 | 162 | 11 | 160 | 1.10e-37 | 138 |
| MS.gene38187.t1 | MTR_0036s0150 | 47.712 | 153 | 68 | 4 | 18 | 162 | 8 | 156 | 1.83e-37 | 137 |
| MS.gene38187.t1 | MTR_1g090723 | 47.059 | 153 | 69 | 4 | 18 | 162 | 11 | 159 | 2.44e-37 | 137 |
| MS.gene38187.t1 | MTR_1g090723 | 47.059 | 153 | 69 | 4 | 18 | 162 | 11 | 159 | 3.09e-37 | 137 |
| MS.gene38187.t1 | MTR_1g097300 | 46.452 | 155 | 67 | 4 | 18 | 162 | 22 | 170 | 8.15e-37 | 135 |
| MS.gene38187.t1 | MTR_8g063550 | 44.304 | 158 | 72 | 4 | 14 | 161 | 5 | 156 | 7.71e-36 | 129 |
| MS.gene38187.t1 | MTR_8g063550 | 44.304 | 158 | 72 | 4 | 14 | 161 | 5 | 156 | 1.92e-35 | 130 |
| MS.gene38187.t1 | MTR_8g063550 | 44.304 | 158 | 72 | 4 | 14 | 161 | 5 | 156 | 2.73e-35 | 129 |
| MS.gene38187.t1 | MTR_4g134460 | 45.806 | 155 | 76 | 4 | 12 | 162 | 52 | 202 | 3.00e-35 | 129 |
| MS.gene38187.t1 | MTR_8g093580 | 43.038 | 158 | 74 | 4 | 14 | 161 | 5 | 156 | 2.30e-33 | 125 |
| MS.gene38187.t1 | MTR_8g023860 | 40.132 | 152 | 80 | 5 | 14 | 159 | 11 | 157 | 2.02e-31 | 119 |
| MS.gene38187.t1 | MTR_4g094302 | 39.103 | 156 | 75 | 4 | 15 | 159 | 11 | 157 | 2.54e-31 | 114 |
| MS.gene38187.t1 | MTR_3g096140 | 44.681 | 141 | 60 | 5 | 32 | 161 | 3 | 136 | 1.01e-30 | 115 |
| MS.gene38187.t1 | MTR_4g094302 | 42.636 | 129 | 63 | 3 | 15 | 141 | 11 | 130 | 6.12e-30 | 109 |
| MS.gene38187.t1 | MTR_8g023930 | 40.909 | 154 | 80 | 5 | 15 | 162 | 24 | 172 | 8.78e-30 | 115 |
| MS.gene38187.t1 | MTR_8g094580 | 42.767 | 159 | 70 | 6 | 65 | 216 | 6 | 150 | 1.24e-29 | 110 |
| MS.gene38187.t1 | MTR_2g086690 | 40.491 | 163 | 77 | 6 | 16 | 162 | 5 | 163 | 3.29e-29 | 109 |
| MS.gene38187.t1 | MTR_8g023900 | 39.623 | 159 | 85 | 5 | 15 | 167 | 12 | 165 | 4.74e-29 | 113 |
| MS.gene38187.t1 | MTR_8g023900 | 41.060 | 151 | 78 | 5 | 17 | 161 | 195 | 340 | 1.86e-28 | 111 |
| MS.gene38187.t1 | MTR_4g052620 | 40.123 | 162 | 80 | 6 | 15 | 162 | 5 | 163 | 1.55e-28 | 108 |
| MS.gene38187.t1 | MTR_8g023880 | 38.830 | 188 | 84 | 8 | 15 | 181 | 7 | 184 | 3.20e-28 | 107 |
| MS.gene38187.t1 | MTR_8g093790 | 40.373 | 161 | 72 | 7 | 6 | 163 | 1 | 140 | 2.10e-27 | 103 |
| MS.gene38187.t1 | MTR_7g105170 | 34.118 | 170 | 84 | 7 | 15 | 163 | 4 | 166 | 9.98e-24 | 95.5 |
| MS.gene38187.t1 | MTR_7g083370 | 32.394 | 142 | 85 | 5 | 10 | 146 | 5 | 140 | 1.20e-18 | 79.3 |
| MS.gene38187.t1 | MTR_7g083360 | 32.500 | 160 | 83 | 7 | 10 | 164 | 5 | 144 | 4.15e-18 | 78.2 |
| MS.gene38187.t1 | MTR_3g096400 | 32.544 | 169 | 78 | 7 | 13 | 159 | 5 | 159 | 8.76e-18 | 79.0 |
| MS.gene38187.t1 | MTR_7g083330 | 33.129 | 163 | 97 | 6 | 13 | 169 | 16 | 172 | 4.32e-17 | 76.6 |
| MS.gene38187.t1 | MTR_1g045470 | 33.735 | 166 | 94 | 7 | 23 | 177 | 13 | 173 | 4.95e-15 | 73.2 |
| MS.gene38187.t1 | MTR_7g116460 | 32.432 | 148 | 85 | 6 | 21 | 157 | 11 | 154 | 3.58e-13 | 66.2 |
| MS.gene38187.t1 | MTR_4g078875 | 32.886 | 149 | 75 | 7 | 15 | 143 | 48 | 191 | 5.47e-13 | 67.0 |
| MS.gene38187.t1 | MTR_2g014680 | 30.994 | 171 | 87 | 9 | 15 | 163 | 53 | 214 | 1.30e-12 | 65.9 |
| MS.gene38187.t1 | MTR_4g088245 | 29.167 | 168 | 94 | 8 | 15 | 163 | 68 | 229 | 7.47e-12 | 63.9 |
| MS.gene38187.t1 | MTR_2g090735 | 28.372 | 215 | 106 | 12 | 15 | 202 | 49 | 242 | 1.91e-11 | 62.4 |
| MS.gene38187.t1 | MTR_8g069160 | 30.872 | 149 | 79 | 7 | 15 | 144 | 68 | 211 | 1.91e-11 | 62.4 |
| MS.gene38187.t1 | MTR_8g102240 | 29.714 | 175 | 91 | 8 | 15 | 163 | 47 | 215 | 3.40e-11 | 62.4 |
| MS.gene38187.t1 | MTR_8g102240 | 29.714 | 175 | 91 | 8 | 15 | 163 | 47 | 215 | 3.41e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38187.t1 | AT5G13180 | 73.125 | 160 | 39 | 2 | 7 | 164 | 6 | 163 | 3.32e-84 | 251 |
| MS.gene38187.t1 | AT2G33480 | 70.122 | 164 | 44 | 2 | 1 | 163 | 1 | 160 | 2.31e-82 | 246 |
| MS.gene38187.t1 | AT2G33480 | 69.277 | 166 | 44 | 2 | 1 | 163 | 1 | 162 | 5.00e-82 | 246 |
| MS.gene38187.t1 | AT3G04070 | 53.714 | 175 | 67 | 4 | 6 | 166 | 1 | 175 | 6.76e-56 | 181 |
| MS.gene38187.t1 | AT1G69490 | 54.971 | 171 | 62 | 4 | 7 | 167 | 1 | 166 | 5.41e-55 | 177 |
| MS.gene38187.t1 | AT1G77450 | 52.273 | 176 | 67 | 5 | 6 | 171 | 1 | 169 | 8.54e-55 | 176 |
| MS.gene38187.t1 | AT1G61110 | 54.913 | 173 | 57 | 4 | 11 | 165 | 12 | 181 | 1.07e-54 | 177 |
| MS.gene38187.t1 | AT3G04070 | 49.738 | 191 | 66 | 4 | 6 | 166 | 1 | 191 | 8.59e-54 | 176 |
| MS.gene38187.t1 | AT5G61430 | 53.892 | 167 | 65 | 5 | 6 | 164 | 7 | 169 | 9.67e-54 | 176 |
| MS.gene38187.t1 | AT2G24430 | 54.268 | 164 | 68 | 3 | 9 | 167 | 10 | 171 | 4.95e-53 | 173 |
| MS.gene38187.t1 | AT2G24430 | 54.268 | 164 | 68 | 3 | 9 | 167 | 10 | 171 | 4.95e-53 | 173 |
| MS.gene38187.t1 | AT5G39610 | 53.503 | 157 | 61 | 3 | 13 | 161 | 18 | 170 | 5.43e-53 | 172 |
| MS.gene38187.t1 | AT5G07680 | 52.795 | 161 | 64 | 4 | 12 | 164 | 14 | 170 | 2.66e-52 | 172 |
| MS.gene38187.t1 | AT1G33280 | 53.595 | 153 | 61 | 2 | 15 | 161 | 8 | 156 | 3.83e-52 | 171 |
| MS.gene38187.t1 | AT5G07680 | 53.797 | 158 | 61 | 4 | 15 | 164 | 3 | 156 | 4.07e-52 | 171 |
| MS.gene38187.t1 | AT1G65910 | 43.694 | 222 | 100 | 5 | 13 | 213 | 4 | 221 | 6.81e-52 | 177 |
| MS.gene38187.t1 | AT3G15510 | 56.250 | 160 | 51 | 4 | 19 | 161 | 21 | 178 | 9.24e-52 | 171 |
| MS.gene38187.t1 | AT4G10350 | 47.368 | 209 | 71 | 8 | 15 | 214 | 9 | 187 | 1.71e-51 | 170 |
| MS.gene38187.t1 | AT4G27410 | 51.534 | 163 | 69 | 3 | 12 | 168 | 11 | 169 | 1.72e-51 | 169 |
| MS.gene38187.t1 | AT5G17260 | 51.205 | 166 | 68 | 3 | 13 | 169 | 4 | 165 | 2.18e-51 | 173 |
| MS.gene38187.t1 | AT1G54330 | 54.268 | 164 | 62 | 3 | 13 | 169 | 4 | 161 | 2.25e-51 | 168 |
| MS.gene38187.t1 | AT3G18400 | 53.416 | 161 | 66 | 4 | 12 | 167 | 2 | 158 | 4.37e-51 | 168 |
| MS.gene38187.t1 | AT3G03200 | 49.123 | 171 | 74 | 3 | 13 | 174 | 4 | 170 | 7.51e-51 | 172 |
| MS.gene38187.t1 | AT1G62700 | 50.282 | 177 | 77 | 4 | 14 | 183 | 6 | 178 | 7.77e-51 | 169 |
| MS.gene38187.t1 | AT1G62700 | 50.282 | 177 | 77 | 4 | 14 | 183 | 6 | 178 | 7.77e-51 | 169 |
| MS.gene38187.t1 | AT3G04060 | 53.797 | 158 | 62 | 4 | 13 | 162 | 18 | 172 | 2.94e-50 | 167 |
| MS.gene38187.t1 | AT1G12260 | 50.000 | 168 | 73 | 4 | 15 | 175 | 7 | 170 | 3.18e-50 | 167 |
| MS.gene38187.t1 | AT5G18270 | 53.165 | 158 | 63 | 3 | 13 | 162 | 19 | 173 | 3.28e-50 | 166 |
| MS.gene38187.t1 | AT1G01720 | 45.327 | 214 | 98 | 6 | 13 | 216 | 5 | 209 | 4.42e-50 | 165 |
| MS.gene38187.t1 | AT1G52880 | 51.445 | 173 | 61 | 3 | 19 | 177 | 21 | 184 | 4.57e-50 | 166 |
| MS.gene38187.t1 | AT1G76420 | 52.866 | 157 | 65 | 4 | 12 | 162 | 19 | 172 | 5.30e-50 | 166 |
| MS.gene38187.t1 | AT5G18270 | 53.165 | 158 | 63 | 3 | 13 | 162 | 19 | 173 | 6.45e-50 | 166 |
| MS.gene38187.t1 | AT1G33060 | 52.903 | 155 | 61 | 3 | 15 | 161 | 24 | 174 | 7.90e-50 | 172 |
| MS.gene38187.t1 | AT1G33060 | 52.903 | 155 | 61 | 3 | 15 | 161 | 24 | 174 | 8.26e-50 | 172 |
| MS.gene38187.t1 | AT1G12260 | 50.000 | 168 | 73 | 4 | 15 | 175 | 7 | 170 | 1.22e-49 | 166 |
| MS.gene38187.t1 | AT5G62380 | 53.503 | 157 | 60 | 5 | 13 | 161 | 5 | 156 | 2.45e-49 | 164 |
| MS.gene38187.t1 | AT5G62380 | 53.503 | 157 | 60 | 5 | 13 | 161 | 5 | 156 | 2.45e-49 | 164 |
| MS.gene38187.t1 | AT4G35580 | 45.918 | 196 | 86 | 4 | 15 | 202 | 9 | 192 | 2.57e-49 | 169 |
| MS.gene38187.t1 | AT4G35580 | 45.918 | 196 | 86 | 4 | 15 | 202 | 9 | 192 | 2.59e-49 | 169 |
| MS.gene38187.t1 | AT2G18060 | 48.889 | 180 | 76 | 6 | 15 | 186 | 9 | 180 | 2.74e-49 | 165 |
| MS.gene38187.t1 | AT2G18060 | 48.889 | 180 | 76 | 6 | 15 | 186 | 9 | 180 | 2.74e-49 | 165 |
| MS.gene38187.t1 | AT4G35580 | 45.918 | 196 | 86 | 4 | 15 | 202 | 9 | 192 | 2.81e-49 | 168 |
| MS.gene38187.t1 | AT3G15170 | 50.595 | 168 | 72 | 5 | 12 | 171 | 17 | 181 | 3.24e-49 | 163 |
| MS.gene38187.t1 | AT4G27410 | 46.667 | 180 | 69 | 3 | 12 | 168 | 11 | 186 | 8.12e-49 | 162 |
| MS.gene38187.t1 | AT5G66300 | 49.438 | 178 | 74 | 7 | 15 | 183 | 12 | 182 | 1.04e-48 | 161 |
| MS.gene38187.t1 | AT4G36160 | 48.315 | 178 | 75 | 5 | 15 | 183 | 10 | 179 | 1.75e-48 | 163 |
| MS.gene38187.t1 | AT4G36160 | 48.315 | 178 | 75 | 5 | 15 | 183 | 10 | 179 | 1.75e-48 | 163 |
| MS.gene38187.t1 | AT4G36160 | 48.315 | 178 | 75 | 5 | 15 | 183 | 14 | 183 | 1.88e-48 | 163 |
| MS.gene38187.t1 | AT3G17730 | 50.318 | 157 | 66 | 3 | 13 | 161 | 4 | 156 | 2.17e-48 | 159 |
| MS.gene38187.t1 | AT5G63790 | 48.370 | 184 | 78 | 5 | 2 | 174 | 37 | 214 | 5.00e-48 | 160 |
| MS.gene38187.t1 | AT5G63790 | 48.370 | 184 | 78 | 5 | 2 | 174 | 47 | 224 | 5.13e-48 | 160 |
| MS.gene38187.t1 | AT1G79580 | 51.266 | 158 | 66 | 3 | 11 | 161 | 13 | 166 | 5.33e-48 | 162 |
| MS.gene38187.t1 | AT1G79580 | 51.266 | 158 | 66 | 3 | 11 | 161 | 13 | 166 | 5.33e-48 | 162 |
| MS.gene38187.t1 | AT1G79580 | 51.266 | 158 | 66 | 3 | 11 | 161 | 13 | 166 | 5.33e-48 | 162 |
| MS.gene38187.t1 | AT1G79580 | 51.266 | 158 | 66 | 3 | 11 | 161 | 13 | 166 | 5.33e-48 | 162 |
| MS.gene38187.t1 | AT1G79580 | 51.266 | 158 | 66 | 3 | 11 | 161 | 13 | 166 | 5.33e-48 | 162 |
| MS.gene38187.t1 | AT5G53950 | 51.923 | 156 | 65 | 3 | 15 | 162 | 17 | 170 | 9.63e-48 | 161 |
| MS.gene38187.t1 | AT3G29035 | 57.143 | 133 | 50 | 2 | 12 | 141 | 21 | 149 | 1.02e-47 | 159 |
| MS.gene38187.t1 | AT1G52890 | 50.307 | 163 | 71 | 3 | 12 | 168 | 11 | 169 | 1.16e-47 | 159 |
| MS.gene38187.t1 | AT5G46590 | 44.944 | 178 | 86 | 3 | 11 | 179 | 2 | 176 | 2.03e-47 | 158 |
| MS.gene38187.t1 | AT1G71930 | 49.351 | 154 | 67 | 3 | 15 | 161 | 9 | 158 | 3.00e-47 | 158 |
| MS.gene38187.t1 | AT1G71930 | 49.351 | 154 | 67 | 3 | 15 | 161 | 9 | 158 | 3.00e-47 | 158 |
| MS.gene38187.t1 | AT3G12977 | 44.809 | 183 | 88 | 5 | 12 | 185 | 15 | 193 | 5.85e-47 | 156 |
| MS.gene38187.t1 | AT5G08790 | 52.071 | 169 | 62 | 6 | 12 | 168 | 4 | 165 | 8.06e-47 | 156 |
| MS.gene38187.t1 | AT3G15500 | 48.538 | 171 | 78 | 3 | 12 | 176 | 11 | 177 | 9.03e-47 | 157 |
| MS.gene38187.t1 | AT3G10490 | 51.592 | 157 | 63 | 3 | 15 | 162 | 27 | 179 | 1.64e-46 | 154 |
| MS.gene38187.t1 | AT3G10480 | 52.229 | 157 | 62 | 3 | 15 | 162 | 27 | 179 | 2.12e-46 | 159 |
| MS.gene38187.t1 | AT2G46770 | 45.355 | 183 | 74 | 4 | 1 | 161 | 2 | 180 | 2.38e-46 | 157 |
| MS.gene38187.t1 | AT2G33480 | 66.355 | 107 | 29 | 2 | 60 | 163 | 3 | 105 | 4.66e-46 | 152 |
| MS.gene38187.t1 | AT3G61910 | 45.143 | 175 | 70 | 5 | 10 | 162 | 6 | 176 | 5.03e-46 | 155 |
| MS.gene38187.t1 | AT1G32770 | 45.614 | 171 | 70 | 4 | 10 | 161 | 11 | 177 | 7.01e-46 | 156 |
| MS.gene38187.t1 | AT1G56010 | 45.402 | 174 | 81 | 4 | 12 | 175 | 16 | 185 | 2.81e-45 | 153 |
| MS.gene38187.t1 | AT3G10480 | 51.923 | 156 | 63 | 3 | 15 | 162 | 27 | 178 | 3.93e-45 | 156 |
| MS.gene38187.t1 | AT3G10490 | 51.592 | 157 | 63 | 3 | 15 | 162 | 27 | 179 | 1.03e-44 | 155 |
| MS.gene38187.t1 | AT5G39820 | 43.902 | 205 | 77 | 7 | 2 | 179 | 8 | 201 | 1.26e-44 | 152 |
| MS.gene38187.t1 | AT3G10500 | 49.390 | 164 | 71 | 3 | 7 | 162 | 1 | 160 | 2.64e-44 | 155 |
| MS.gene38187.t1 | AT4G17980 | 46.584 | 161 | 74 | 3 | 11 | 161 | 2 | 160 | 3.87e-44 | 149 |
| MS.gene38187.t1 | AT5G04410 | 50.000 | 164 | 70 | 3 | 7 | 162 | 1 | 160 | 4.59e-44 | 155 |
| MS.gene38187.t1 | AT4G17980 | 46.584 | 161 | 74 | 3 | 11 | 161 | 2 | 160 | 6.07e-44 | 149 |
| MS.gene38187.t1 | AT5G46590 | 47.619 | 147 | 69 | 2 | 11 | 152 | 2 | 145 | 1.34e-43 | 148 |
| MS.gene38187.t1 | AT4G28530 | 47.337 | 169 | 67 | 5 | 14 | 163 | 9 | 174 | 1.80e-42 | 147 |
| MS.gene38187.t1 | AT2G17040 | 43.850 | 187 | 84 | 6 | 12 | 181 | 4 | 186 | 3.63e-42 | 144 |
| MS.gene38187.t1 | AT3G10480 | 43.386 | 189 | 61 | 3 | 15 | 161 | 27 | 211 | 2.46e-41 | 147 |
| MS.gene38187.t1 | AT1G32510 | 45.783 | 166 | 78 | 3 | 15 | 168 | 6 | 171 | 4.38e-41 | 141 |
| MS.gene38187.t1 | AT5G24590 | 47.368 | 171 | 67 | 6 | 7 | 161 | 1 | 164 | 1.37e-40 | 144 |
| MS.gene38187.t1 | AT3G12910 | 41.743 | 218 | 102 | 8 | 13 | 207 | 20 | 235 | 2.37e-40 | 140 |
| MS.gene38187.t1 | AT2G43000 | 39.623 | 212 | 108 | 6 | 12 | 216 | 16 | 214 | 2.66e-40 | 139 |
| MS.gene38187.t1 | AT3G49530 | 46.452 | 155 | 72 | 4 | 15 | 161 | 13 | 164 | 3.68e-40 | 142 |
| MS.gene38187.t1 | AT3G49530 | 46.452 | 155 | 72 | 4 | 15 | 161 | 13 | 164 | 5.57e-40 | 142 |
| MS.gene38187.t1 | AT1G26870 | 45.882 | 170 | 74 | 5 | 8 | 162 | 10 | 176 | 1.17e-39 | 141 |
| MS.gene38187.t1 | AT1G34190 | 46.626 | 163 | 72 | 5 | 9 | 162 | 11 | 167 | 1.52e-37 | 137 |
| MS.gene38187.t1 | AT1G34180 | 50.725 | 138 | 58 | 3 | 9 | 141 | 11 | 143 | 6.36e-37 | 134 |
| MS.gene38187.t1 | AT2G02450 | 47.260 | 146 | 70 | 3 | 18 | 159 | 54 | 196 | 6.95e-37 | 133 |
| MS.gene38187.t1 | AT5G64060 | 43.750 | 160 | 78 | 3 | 11 | 162 | 2 | 157 | 7.83e-37 | 132 |
| MS.gene38187.t1 | AT2G02450 | 47.260 | 146 | 70 | 3 | 18 | 159 | 54 | 196 | 8.84e-37 | 133 |
| MS.gene38187.t1 | AT1G34180 | 50.725 | 138 | 58 | 3 | 9 | 141 | 11 | 143 | 1.73e-36 | 134 |
| MS.gene38187.t1 | AT1G34180 | 46.667 | 150 | 58 | 3 | 9 | 141 | 11 | 155 | 7.20e-36 | 131 |
| MS.gene38187.t1 | AT5G09330 | 40.887 | 203 | 103 | 5 | 11 | 204 | 2 | 196 | 1.23e-35 | 131 |
| MS.gene38187.t1 | AT5G09330 | 40.887 | 203 | 103 | 5 | 11 | 204 | 2 | 196 | 1.23e-35 | 131 |
| MS.gene38187.t1 | AT5G09330 | 40.887 | 203 | 103 | 5 | 11 | 204 | 2 | 196 | 1.23e-35 | 131 |
| MS.gene38187.t1 | AT5G09330 | 40.887 | 203 | 103 | 5 | 11 | 204 | 2 | 196 | 1.23e-35 | 131 |
| MS.gene38187.t1 | AT5G09330 | 40.887 | 203 | 103 | 5 | 11 | 204 | 2 | 196 | 1.23e-35 | 131 |
| MS.gene38187.t1 | AT1G34180 | 46.667 | 150 | 58 | 3 | 9 | 141 | 11 | 155 | 1.82e-35 | 132 |
| MS.gene38187.t1 | AT2G27300 | 41.615 | 161 | 77 | 4 | 7 | 158 | 1 | 153 | 2.26e-35 | 128 |
| MS.gene38187.t1 | AT4G10350 | 46.711 | 152 | 48 | 6 | 65 | 213 | 18 | 139 | 2.92e-35 | 127 |
| MS.gene38187.t1 | AT5G22290 | 42.069 | 145 | 73 | 3 | 18 | 158 | 24 | 161 | 6.79e-35 | 127 |
| MS.gene38187.t1 | AT3G44290 | 42.759 | 145 | 71 | 3 | 18 | 158 | 17 | 153 | 1.91e-34 | 122 |
| MS.gene38187.t1 | AT3G44290 | 42.759 | 145 | 71 | 3 | 18 | 158 | 17 | 153 | 1.43e-33 | 123 |
| MS.gene38187.t1 | AT5G04395 | 42.857 | 147 | 67 | 2 | 12 | 142 | 25 | 170 | 4.23e-33 | 118 |
| MS.gene38187.t1 | AT5G61430 | 55.238 | 105 | 38 | 3 | 65 | 164 | 6 | 106 | 7.30e-33 | 120 |
| MS.gene38187.t1 | AT5G14000 | 36.571 | 175 | 104 | 3 | 1 | 172 | 1 | 171 | 1.23e-32 | 117 |
| MS.gene38187.t1 | AT1G02230 | 41.176 | 170 | 86 | 7 | 16 | 178 | 4 | 166 | 6.34e-32 | 119 |
| MS.gene38187.t1 | AT5G14000 | 39.744 | 156 | 87 | 3 | 1 | 153 | 1 | 152 | 1.18e-31 | 113 |
| MS.gene38187.t1 | AT3G12977 | 46.825 | 126 | 57 | 4 | 66 | 185 | 19 | 140 | 6.38e-31 | 114 |
| MS.gene38187.t1 | AT1G56010 | 48.673 | 113 | 48 | 2 | 69 | 175 | 10 | 118 | 1.73e-30 | 113 |
| MS.gene38187.t1 | AT1G02250 | 43.137 | 153 | 75 | 5 | 16 | 161 | 4 | 151 | 8.81e-30 | 114 |
| MS.gene38187.t1 | AT1G32870 | 43.787 | 169 | 77 | 5 | 4 | 162 | 1 | 161 | 5.88e-29 | 113 |
| MS.gene38187.t1 | AT1G32870 | 43.787 | 169 | 77 | 5 | 4 | 162 | 1 | 161 | 6.21e-29 | 113 |
| MS.gene38187.t1 | AT1G32870 | 43.787 | 169 | 77 | 5 | 4 | 162 | 37 | 197 | 8.11e-29 | 113 |
| MS.gene38187.t1 | AT5G64530 | 35.638 | 188 | 89 | 5 | 13 | 181 | 1 | 175 | 1.06e-28 | 107 |
| MS.gene38187.t1 | AT4G01550 | 38.182 | 165 | 92 | 5 | 17 | 174 | 6 | 167 | 4.02e-28 | 110 |
| MS.gene38187.t1 | AT5G50820 | 35.749 | 207 | 99 | 6 | 13 | 214 | 15 | 192 | 6.16e-28 | 105 |
| MS.gene38187.t1 | AT5G64530 | 42.748 | 131 | 60 | 4 | 13 | 141 | 1 | 118 | 2.10e-27 | 102 |
| MS.gene38187.t1 | AT4G01520 | 37.647 | 170 | 94 | 6 | 16 | 178 | 5 | 169 | 2.52e-26 | 103 |
| MS.gene38187.t1 | AT3G04420 | 38.750 | 160 | 83 | 6 | 16 | 168 | 4 | 155 | 2.63e-26 | 103 |
| MS.gene38187.t1 | AT4G01540 | 38.690 | 168 | 91 | 6 | 18 | 178 | 7 | 169 | 3.05e-26 | 104 |
| MS.gene38187.t1 | AT3G04420 | 38.750 | 160 | 83 | 6 | 16 | 168 | 4 | 155 | 3.51e-26 | 103 |
| MS.gene38187.t1 | AT4G01540 | 38.690 | 168 | 91 | 6 | 18 | 178 | 7 | 169 | 4.25e-26 | 104 |
| MS.gene38187.t1 | AT4G01540 | 38.690 | 168 | 91 | 6 | 18 | 178 | 7 | 169 | 4.61e-26 | 104 |
| MS.gene38187.t1 | AT4G01540 | 38.690 | 168 | 91 | 6 | 18 | 178 | 7 | 169 | 6.46e-26 | 104 |
| MS.gene38187.t1 | AT3G44350 | 37.267 | 161 | 84 | 5 | 15 | 162 | 5 | 161 | 9.28e-25 | 98.2 |
| MS.gene38187.t1 | AT1G02220 | 39.355 | 155 | 72 | 6 | 16 | 160 | 4 | 146 | 1.79e-23 | 97.4 |
| MS.gene38187.t1 | AT5G22380 | 36.250 | 160 | 83 | 5 | 18 | 162 | 8 | 163 | 3.13e-23 | 94.0 |
| MS.gene38187.t1 | AT3G44350 | 38.298 | 141 | 74 | 4 | 15 | 146 | 5 | 141 | 1.22e-22 | 90.5 |
| MS.gene38187.t1 | AT3G10490 | 52.439 | 82 | 31 | 2 | 85 | 162 | 2 | 79 | 1.63e-21 | 91.3 |
| MS.gene38187.t1 | AT3G10490 | 52.439 | 82 | 31 | 2 | 85 | 162 | 2 | 79 | 1.63e-21 | 91.3 |
| MS.gene38187.t1 | AT2G18060 | 46.465 | 99 | 43 | 4 | 90 | 186 | 2 | 92 | 2.85e-21 | 89.7 |
| MS.gene38187.t1 | AT4G28530 | 34.911 | 169 | 51 | 5 | 14 | 163 | 9 | 137 | 1.99e-20 | 87.8 |
| MS.gene38187.t1 | AT2G43000 | 36.111 | 144 | 76 | 4 | 77 | 216 | 5 | 136 | 2.38e-20 | 85.5 |
| MS.gene38187.t1 | AT1G01010 | 35.849 | 159 | 81 | 7 | 17 | 161 | 5 | 156 | 1.05e-18 | 84.3 |
| MS.gene38187.t1 | AT3G55210 | 32.948 | 173 | 82 | 8 | 15 | 164 | 11 | 172 | 5.10e-16 | 75.5 |
| MS.gene38187.t1 | AT3G56530 | 34.591 | 159 | 87 | 7 | 12 | 160 | 49 | 200 | 1.48e-15 | 74.3 |
| MS.gene38187.t1 | AT5G14000 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 7.02e-15 | 72.0 |
| MS.gene38187.t1 | AT5G41090 | 28.481 | 158 | 93 | 4 | 15 | 159 | 8 | 158 | 9.19e-15 | 70.9 |
| MS.gene38187.t1 | AT5G22290 | 47.059 | 68 | 29 | 2 | 91 | 158 | 2 | 62 | 1.10e-14 | 71.2 |
| MS.gene38187.t1 | AT4G29230 | 31.461 | 178 | 89 | 9 | 13 | 163 | 45 | 216 | 7.40e-14 | 70.5 |
| MS.gene38187.t1 | AT4G29230 | 31.461 | 178 | 89 | 9 | 13 | 163 | 46 | 217 | 7.55e-14 | 70.5 |
| MS.gene38187.t1 | AT4G29230 | 31.461 | 178 | 89 | 9 | 13 | 163 | 46 | 217 | 8.41e-14 | 70.1 |
| MS.gene38187.t1 | AT1G28470 | 31.548 | 168 | 90 | 9 | 15 | 163 | 77 | 238 | 1.93e-13 | 68.6 |
| MS.gene38187.t1 | AT5G56620 | 29.282 | 181 | 92 | 8 | 13 | 163 | 41 | 215 | 3.73e-12 | 65.1 |
| MS.gene38187.t1 | AT5G56620 | 30.818 | 159 | 75 | 7 | 13 | 141 | 41 | 194 | 4.45e-12 | 65.1 |
| MS.gene38187.t1 | AT5G56620 | 29.282 | 181 | 92 | 8 | 13 | 163 | 41 | 215 | 5.51e-12 | 64.7 |
| MS.gene38187.t1 | AT4G28500 | 30.178 | 169 | 92 | 8 | 15 | 163 | 59 | 221 | 1.24e-11 | 63.2 |
Find 46 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCACTCCCATCCTCTTT+TGG | 0.255864 | 5.3:+78925257 | MS.gene38187:CDS |
| TCGGTTCCCGTTTGGATACT+TGG | 0.293238 | 5.3:-78924763 | None:intergenic |
| TGTTGTTCTATTAGGTGATA+TGG | 0.301557 | 5.3:+78924707 | MS.gene38187:intron |
| CTCCTCAATCACAAATGAAT+TGG | 0.308698 | 5.3:+78925208 | MS.gene38187:CDS |
| GAGCTACAAACTCTGGTTAC+TGG | 0.345872 | 5.3:+78924793 | MS.gene38187:CDS |
| CTGTTAGATCGGTTCCCGTT+TGG | 0.351967 | 5.3:-78924771 | None:intergenic |
| AAAGGGAAAGAGAAGACTTT+AGG | 0.352634 | 5.3:-78924447 | None:intergenic |
| ATCTTTGCAAGTCTGATCCT+TGG | 0.370348 | 5.3:+78924496 | MS.gene38187:CDS |
| TCTTTGCAAGTCTGATCCTT+GGG | 0.393386 | 5.3:+78924497 | MS.gene38187:CDS |
| ATCCAATTCATTTGTGATTG+AGG | 0.401398 | 5.3:-78925210 | None:intergenic |
| TTACTGGAAGGCAACTGGTT+TGG | 0.413426 | 5.3:+78924809 | MS.gene38187:CDS |
| TTCATTTGTGATTGAGGAGG+AGG | 0.421555 | 5.3:-78925204 | None:intergenic |
| CTTCATCTGTTGGATGAAAA+CGG | 0.429980 | 5.3:-78924401 | None:intergenic |
| TCTGGTTACTGGAAGGCAAC+TGG | 0.438388 | 5.3:+78924804 | MS.gene38187:CDS |
| AAGACGACTCGTGAAGTTGT+TGG | 0.453684 | 5.3:+78924855 | MS.gene38187:CDS |
| CTCAGCTTCAAGTTCAAAAG+TGG | 0.464412 | 5.3:+78925133 | MS.gene38187:CDS |
| ACAACAAGTTCTTCATCTGT+TGG | 0.464543 | 5.3:-78924411 | None:intergenic |
| GACTTGCAAAGATCAACTTC+AGG | 0.465462 | 5.3:-78924486 | None:intergenic |
| AAGATCAACTTCAGGAATGA+TGG | 0.468508 | 5.3:-78924478 | None:intergenic |
| TTCCTCTCACTCCAACCCCT+TGG | 0.484311 | 5.3:+78924962 | MS.gene38187:CDS |
| AAAGAAGCCAAGTATCCAAA+CGG | 0.506694 | 5.3:+78924756 | MS.gene38187:CDS |
| GAATGATGGAAGCAGGTAAA+GGG | 0.510410 | 5.3:-78924464 | None:intergenic |
| GGTTGGAGTGAGAGGAAGTG+AGG | 0.514880 | 5.3:-78924956 | None:intergenic |
| TAAGCATTTCCAAAAGAGGA+TGG | 0.518802 | 5.3:-78925266 | None:intergenic |
| GGATTAAGCATTTCCAAAAG+AGG | 0.521576 | 5.3:-78925270 | None:intergenic |
| AGTTTGTAGCTCTGTTAGAT+CGG | 0.532621 | 5.3:-78924782 | None:intergenic |
| GGAATGATGGAAGCAGGTAA+AGG | 0.533367 | 5.3:-78924465 | None:intergenic |
| ACTTCAGGAATGATGGAAGC+AGG | 0.542259 | 5.3:-78924471 | None:intergenic |
| GACCAAGGGGTTGGAGTGAG+AGG | 0.548262 | 5.3:-78924964 | None:intergenic |
| CTCATGGTTCAAGAACTGAT+TGG | 0.548704 | 5.3:+78924916 | MS.gene38187:CDS |
| AGAAAGACTGACCAAGGGGT+TGG | 0.548887 | 5.3:-78924973 | None:intergenic |
| AAGAAGCCAAGTATCCAAAC+GGG | 0.550135 | 5.3:+78924757 | MS.gene38187:CDS |
| TCTAACAGAGCTACAAACTC+TGG | 0.560803 | 5.3:+78924786 | MS.gene38187:CDS |
| AAGCATTTCCAAAAGAGGAT+GGG | 0.563423 | 5.3:-78925265 | None:intergenic |
| CAATTCATTTGTGATTGAGG+AGG | 0.568174 | 5.3:-78925207 | None:intergenic |
| TCTGATCCTTGGGATTTACC+TGG | 0.570788 | 5.3:+78924507 | MS.gene38187:CDS |
| GGATGAAAACGGAAACCTGC+TGG | 0.571341 | 5.3:-78924390 | None:intergenic |
| CGCATATTTCTGAAGAGTAG+AGG | 0.580742 | 5.3:+78925089 | MS.gene38187:CDS |
| TACAGAGGCAAACCACCTCA+TGG | 0.581454 | 5.3:+78924900 | MS.gene38187:CDS |
| GGTGAAGTGAGATTGCCAGC+AGG | 0.595430 | 5.3:+78924375 | MS.gene38187:CDS |
| AGCATACCAGGTAAATCCCA+AGG | 0.597008 | 5.3:-78924513 | None:intergenic |
| TCAGTTCTTGAACCATGAGG+TGG | 0.615010 | 5.3:-78924912 | None:intergenic |
| TACAAACTCTGGTTACTGGA+AGG | 0.635081 | 5.3:+78924797 | MS.gene38187:CDS |
| ATTTCTGAAGAGTAGAGGTG+AGG | 0.681363 | 5.3:+78925094 | MS.gene38187:CDS |
| TAGGTGATATGGAACAAGAG+AGG | 0.694959 | 5.3:+78924718 | MS.gene38187:intron |
| CAATCAGTTCTTGAACCATG+AGG | 0.707588 | 5.3:-78924915 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATATGAATGAAT+TGG | + | chr5.3:78925036-78925055 | MS.gene38187:intron | 10.0% |
| !! | TATTAATATATGAATGAATT+GGG | + | chr5.3:78925037-78925056 | MS.gene38187:intron | 10.0% |
| !! | AAAATAGAAAAGAAAAGAAA+AGG | - | chr5.3:78924542-78924561 | None:intergenic | 15.0% |
| !!! | ATGAATTTTATGAAGAAGAA+TGG | + | chr5.3:78924354-78924373 | MS.gene38187:CDS | 20.0% |
| ! | AATTCAGAGAAAAGAAAGAA+AGG | - | chr5.3:78925008-78925027 | None:intergenic | 25.0% |
| ATCCAATTCATTTGTGATTG+AGG | - | chr5.3:78925213-78925232 | None:intergenic | 30.0% | |
| TAGTAGAAGTTATCATGTTC+TGG | - | chr5.3:78924648-78924667 | None:intergenic | 30.0% | |
| TGTTGTTCTATTAGGTGATA+TGG | + | chr5.3:78924707-78924726 | MS.gene38187:intron | 30.0% | |
| ! | GGTTTTGCAGAATGAAAATT+GGG | + | chr5.3:78925058-78925077 | MS.gene38187:intron | 30.0% |
| ! | TGAGTATGTGTTGTTCTATT+AGG | + | chr5.3:78924699-78924718 | MS.gene38187:intron | 30.0% |
| !!! | AAAACTCTTGTTTTCTACAG+AGG | + | chr5.3:78924885-78924904 | MS.gene38187:CDS | 30.0% |
| AAAGAAAGAAAGACTGACCA+AGG | - | chr5.3:78924982-78925001 | None:intergenic | 35.0% | |
| AAAGAAGCCAAGTATCCAAA+CGG | + | chr5.3:78924756-78924775 | MS.gene38187:CDS | 35.0% | |
| AAAGGGAAAGAGAAGACTTT+AGG | - | chr5.3:78924450-78924469 | None:intergenic | 35.0% | |
| AAGAAAAGGTAAAGCATACC+AGG | - | chr5.3:78924528-78924547 | None:intergenic | 35.0% | |
| AAGAAAGAAAGACTGACCAA+GGG | - | chr5.3:78924981-78925000 | None:intergenic | 35.0% | |
| AAGATCAACTTCAGGAATGA+TGG | - | chr5.3:78924481-78924500 | None:intergenic | 35.0% | |
| AAGCATTTCCAAAAGAGGAT+GGG | - | chr5.3:78925268-78925287 | None:intergenic | 35.0% | |
| ACAACAAGTTCTTCATCTGT+TGG | - | chr5.3:78924414-78924433 | None:intergenic | 35.0% | |
| CAATTCATTTGTGATTGAGG+AGG | - | chr5.3:78925210-78925229 | None:intergenic | 35.0% | |
| CTCCTCAATCACAAATGAAT+TGG | + | chr5.3:78925208-78925227 | MS.gene38187:CDS | 35.0% | |
| CTTCATCTGTTGGATGAAAA+CGG | - | chr5.3:78924404-78924423 | None:intergenic | 35.0% | |
| TAAGCATTTCCAAAAGAGGA+TGG | - | chr5.3:78925269-78925288 | None:intergenic | 35.0% | |
| ! | AGTTTGTAGCTCTGTTAGAT+CGG | - | chr5.3:78924785-78924804 | None:intergenic | 35.0% |
| ! | GGGTTTTGCAGAATGAAAAT+TGG | + | chr5.3:78925057-78925076 | MS.gene38187:intron | 35.0% |
| AAGAAGCCAAGTATCCAAAC+GGG | + | chr5.3:78924757-78924776 | MS.gene38187:CDS | 40.0% | |
| AGAAAGAAAGACTGACCAAG+GGG | - | chr5.3:78924980-78924999 | None:intergenic | 40.0% | |
| ATCTTTGCAAGTCTGATCCT+TGG | + | chr5.3:78924496-78924515 | MS.gene38187:CDS | 40.0% | |
| CAATCAGTTCTTGAACCATG+AGG | - | chr5.3:78924918-78924937 | None:intergenic | 40.0% | |
| CTCATGGTTCAAGAACTGAT+TGG | + | chr5.3:78924916-78924935 | MS.gene38187:CDS | 40.0% | |
| GACTTGCAAAGATCAACTTC+AGG | - | chr5.3:78924489-78924508 | None:intergenic | 40.0% | |
| TACAAACTCTGGTTACTGGA+AGG | + | chr5.3:78924797-78924816 | MS.gene38187:CDS | 40.0% | |
| TACTGCTGAACAATGTCATG+TGG | + | chr5.3:78924669-78924688 | MS.gene38187:intron | 40.0% | |
| TAGGTGATATGGAACAAGAG+AGG | + | chr5.3:78924718-78924737 | MS.gene38187:intron | 40.0% | |
| TCTAACAGAGCTACAAACTC+TGG | + | chr5.3:78924786-78924805 | MS.gene38187:CDS | 40.0% | |
| TCTTTGCAAGTCTGATCCTT+GGG | + | chr5.3:78924497-78924516 | MS.gene38187:CDS | 40.0% | |
| TTCATTTGTGATTGAGGAGG+AGG | - | chr5.3:78925207-78925226 | None:intergenic | 40.0% | |
| ! | ATTTCTGAAGAGTAGAGGTG+AGG | + | chr5.3:78925094-78925113 | MS.gene38187:CDS | 40.0% |
| ! | CGCATATTTCTGAAGAGTAG+AGG | + | chr5.3:78925089-78925108 | MS.gene38187:CDS | 40.0% |
| ! | CTCAGCTTCAAGTTCAAAAG+TGG | + | chr5.3:78925133-78925152 | MS.gene38187:CDS | 40.0% |
| ! | GAATGATGGAAGCAGGTAAA+GGG | - | chr5.3:78924467-78924486 | None:intergenic | 40.0% |
| AAGACGACTCGTGAAGTTGT+TGG | + | chr5.3:78924855-78924874 | MS.gene38187:CDS | 45.0% | |
| AGCATACCAGGTAAATCCCA+AGG | - | chr5.3:78924516-78924535 | None:intergenic | 45.0% | |
| GAGCTACAAACTCTGGTTAC+TGG | + | chr5.3:78924793-78924812 | MS.gene38187:CDS | 45.0% | |
| TCAGTTCTTGAACCATGAGG+TGG | - | chr5.3:78924915-78924934 | None:intergenic | 45.0% | |
| TCTGATCCTTGGGATTTACC+TGG | + | chr5.3:78924507-78924526 | MS.gene38187:CDS | 45.0% | |
| TTACTGGAAGGCAACTGGTT+TGG | + | chr5.3:78924809-78924828 | MS.gene38187:CDS | 45.0% | |
| ! | AACTCACTCCCATCCTCTTT+TGG | + | chr5.3:78925257-78925276 | MS.gene38187:CDS | 45.0% |
| ! | ACTTCAGGAATGATGGAAGC+AGG | - | chr5.3:78924474-78924493 | None:intergenic | 45.0% |
| ! | GGAATGATGGAAGCAGGTAA+AGG | - | chr5.3:78924468-78924487 | None:intergenic | 45.0% |
| AACACAGACGTCGGACACAA+TGG | + | chr5.3:78924603-78924622 | MS.gene38187:intron | 50.0% | |
| AGAAAGACTGACCAAGGGGT+TGG | - | chr5.3:78924976-78924995 | None:intergenic | 50.0% | |
| CGAAGCACAAACACAGACGT+CGG | + | chr5.3:78924594-78924613 | MS.gene38187:intron | 50.0% | |
| GGATGAAAACGGAAACCTGC+TGG | - | chr5.3:78924393-78924412 | None:intergenic | 50.0% | |
| TACAGAGGCAAACCACCTCA+TGG | + | chr5.3:78924900-78924919 | MS.gene38187:CDS | 50.0% | |
| TCGGTTCCCGTTTGGATACT+TGG | - | chr5.3:78924766-78924785 | None:intergenic | 50.0% | |
| TCTGGTTACTGGAAGGCAAC+TGG | + | chr5.3:78924804-78924823 | MS.gene38187:CDS | 50.0% | |
| ! | CTGTTAGATCGGTTCCCGTT+TGG | - | chr5.3:78924774-78924793 | None:intergenic | 50.0% |
| GGTGAAGTGAGATTGCCAGC+AGG | + | chr5.3:78924375-78924394 | MS.gene38187:CDS | 55.0% | |
| GGTTGGAGTGAGAGGAAGTG+AGG | - | chr5.3:78924959-78924978 | None:intergenic | 55.0% | |
| TTCCTCTCACTCCAACCCCT+TGG | + | chr5.3:78924962-78924981 | MS.gene38187:CDS | 55.0% | |
| GACCAAGGGGTTGGAGTGAG+AGG | - | chr5.3:78924967-78924986 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78924345 | 78925289 | 78924345 | ID=MS.gene38187 |
| chr5.3 | mRNA | 78924345 | 78925289 | 78924345 | ID=MS.gene38187.t1;Parent=MS.gene38187 |
| chr5.3 | exon | 78924345 | 78924528 | 78924345 | ID=MS.gene38187.t1.exon1;Parent=MS.gene38187.t1 |
| chr5.3 | CDS | 78924345 | 78924528 | 78924345 | ID=cds.MS.gene38187.t1;Parent=MS.gene38187.t1 |
| chr5.3 | exon | 78924721 | 78924983 | 78924721 | ID=MS.gene38187.t1.exon2;Parent=MS.gene38187.t1 |
| chr5.3 | CDS | 78924721 | 78924983 | 78924721 | ID=cds.MS.gene38187.t1;Parent=MS.gene38187.t1 |
| chr5.3 | exon | 78925068 | 78925289 | 78925068 | ID=MS.gene38187.t1.exon3;Parent=MS.gene38187.t1 |
| chr5.3 | CDS | 78925068 | 78925289 | 78925068 | ID=cds.MS.gene38187.t1;Parent=MS.gene38187.t1 |
| Gene Sequence |
| Protein sequence |
