Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051710.t1 | KEH20239.1 | 48.3 | 346 | 90 | 9 | 1 | 257 | 1 | 346 | 2.90E-64 | 255.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051710.t1 | O49711 | 37.7 | 69 | 38 | 1 | 167 | 230 | 538 | 606 | 2.8e-07 | 57.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051710.t1 | A0A072TRT9 | 48.3 | 346 | 90 | 9 | 1 | 257 | 1 | 346 | 2.1e-64 | 255.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049701 | MS.gene051710 | 0.823856 | 1.11E-53 | -1.69E-46 |
| MS.gene050221 | MS.gene051710 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene051710 | 0.801757 | 7.75E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene051800 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene054467 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene054775 | 0.817236 | 3.66E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene054801 | 0.861705 | 8.50E-64 | -1.69E-46 |
| MS.gene051710 | MS.gene055091 | 0.802034 | 6.80E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene056174 | 0.809789 | 1.59E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene058515 | 0.84315 | 1.67E-58 | -1.69E-46 |
| MS.gene051710 | MS.gene059276 | 0.829759 | 4.30E-55 | -1.69E-46 |
| MS.gene051710 | MS.gene059584 | 0.808215 | 3.46E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene060167 | 0.821645 | 3.62E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene063356 | 0.807628 | 4.61E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene065863 | 0.824858 | 6.43E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene066335 | 0.804623 | 1.98E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene066436 | 0.810859 | 9.35E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene066680 | 0.804017 | 2.64E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene06697 | 0.810545 | 1.09E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene067473 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene067636 | 0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene067656 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene068010 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene068012 | 0.801635 | 8.20E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene068452 | 0.801648 | 8.16E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene068453 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene069956 | 0.80548 | 1.31E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene073139 | 0.814007 | 1.92E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene09319 | 0.813549 | 2.42E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene09451 | 0.841814 | 3.78E-58 | -1.69E-46 |
| MS.gene051710 | MS.gene09504 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene20558 | 0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene22611 | 0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene23940 | 0.815416 | 9.35E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene24389 | 0.801445 | 8.97E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene24662 | 0.860407 | 2.11E-63 | -1.69E-46 |
| MS.gene051710 | MS.gene25778 | 0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene26056 | 0.804968 | 1.67E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene28659 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene29253 | 0.805679 | 1.19E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene29693 | 0.801217 | 9.99E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene31231 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene31283 | 0.822122 | 2.80E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene31652 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene34251 | 0.833452 | 5.29E-56 | -1.69E-46 |
| MS.gene051710 | MS.gene34667 | 0.81114 | 8.13E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene34700 | 0.809706 | 1.66E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene38078 | 0.822826 | 1.92E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene38187 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene38429 | 0.827128 | 1.86E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene39549 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene41250 | 0.822438 | 2.37E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene41252 | 0.818554 | 1.84E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene44743 | 0.816878 | 4.41E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene45794 | 0.804533 | 2.06E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene46359 | 0.812335 | 4.46E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene48919 | 0.800442 | 1.44E-48 | -1.69E-46 |
| MS.gene051710 | MS.gene51081 | 0.807435 | 5.06E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene51818 | 0.815464 | 9.12E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene52525 | 0.826153 | 3.17E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene53064 | 0.820341 | 7.22E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene54017 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene58638 | 0.810974 | 8.83E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene59780 | 0.841424 | 4.79E-58 | -1.69E-46 |
| MS.gene051710 | MS.gene61742 | 0.838041 | 3.64E-57 | -1.69E-46 |
| MS.gene051710 | MS.gene64249 | 0.810992 | 8.75E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene64567 | 0.824899 | 6.29E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene66192 | 0.820413 | 6.95E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene66682 | 0.811653 | 6.29E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene66939 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene71430 | 0.809147 | 2.19E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene72268 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene73520 | 0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene73522 | 0.828433 | 9.02E-55 | -1.69E-46 |
| MS.gene051710 | MS.gene73555 | 0.80713 | 5.88E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene73568 | 0.814112 | 1.82E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene74025 | 0.846658 | 1.89E-59 | -1.69E-46 |
| MS.gene051710 | MS.gene74380 | 0.832124 | 1.13E-55 | -1.69E-46 |
| MS.gene051710 | MS.gene76063 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene76389 | 0.817109 | 3.91E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene76987 | 0.832803 | 7.67E-56 | -1.69E-46 |
| MS.gene051710 | MS.gene77370 | 0.806708 | 7.22E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene78647 | 0.823472 | 1.36E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene79147 | 0.818803 | 1.62E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene79603 | 0.81149 | 6.82E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene80853 | 0.825127 | 5.55E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene81672 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene051710 | MS.gene82962 | 0.827832 | 1.26E-54 | -1.69E-46 |
| MS.gene051710 | MS.gene84454 | 0.806459 | 8.14E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene84612 | 0.832548 | 8.88E-56 | -1.69E-46 |
| MS.gene051710 | MS.gene84968 | 0.808218 | 3.45E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene85527 | 0.815609 | 8.47E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene86255 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene89778 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene90022 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene90617 | 0.809224 | 2.10E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene92567 | 0.800416 | 1.46E-48 | -1.69E-46 |
| MS.gene051710 | MS.gene96210 | 0.803105 | 4.09E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene97344 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene97534 | 0.820227 | 7.67E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene97797 | 0.84174 | 3.96E-58 | -1.69E-46 |
| MS.gene051710 | MS.gene98087 | 0.802942 | 4.42E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene98531 | 0.822865 | 1.88E-53 | -1.69E-46 |
| MS.gene051710 | MS.gene98612 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene051710 | MS.gene98774 | 0.823897 | 1.08E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051710.t1 | MTR_4g133410 | 80.800 | 125 | 22 | 1 | 139 | 261 | 106 | 230 | 3.54e-65 | 204 |
| MS.gene051710.t1 | MTR_4g133410 | 80.800 | 125 | 22 | 1 | 139 | 261 | 106 | 230 | 3.41e-64 | 205 |
| MS.gene051710.t1 | MTR_4g133410 | 80.800 | 125 | 22 | 1 | 139 | 261 | 240 | 364 | 4.19e-64 | 206 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 2.28e-23 | 98.2 |
| MS.gene051710.t1 | MTR_8g070020 | 79.200 | 125 | 24 | 1 | 139 | 261 | 226 | 350 | 1.04e-63 | 205 |
| MS.gene051710.t1 | MTR_8g070020 | 62.376 | 101 | 13 | 4 | 1 | 89 | 1 | 88 | 3.71e-23 | 97.8 |
| MS.gene051710.t1 | MTR_4g133410 | 80.800 | 125 | 22 | 1 | 139 | 261 | 240 | 364 | 3.71e-63 | 206 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 3.73e-23 | 98.6 |
| MS.gene051710.t1 | MTR_5g034890 | 83.193 | 119 | 19 | 1 | 139 | 257 | 287 | 404 | 9.74e-63 | 207 |
| MS.gene051710.t1 | MTR_4g133410 | 88.889 | 72 | 8 | 0 | 139 | 210 | 106 | 177 | 1.54e-38 | 134 |
| MS.gene051710.t1 | MTR_4g133410 | 88.889 | 72 | 8 | 0 | 139 | 210 | 106 | 177 | 2.24e-38 | 134 |
| MS.gene051710.t1 | MTR_4g133410 | 88.889 | 72 | 8 | 0 | 139 | 210 | 240 | 311 | 2.25e-37 | 134 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 6.43e-24 | 99.0 |
| MS.gene051710.t1 | MTR_4g133410 | 88.889 | 72 | 8 | 0 | 139 | 210 | 240 | 311 | 2.42e-37 | 134 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 6.09e-24 | 99.0 |
| MS.gene051710.t1 | MTR_4g133410 | 88.889 | 72 | 8 | 0 | 139 | 210 | 240 | 311 | 2.91e-37 | 134 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 6.19e-24 | 99.0 |
| MS.gene051710.t1 | MTR_4g081220 | 37.853 | 177 | 55 | 4 | 140 | 261 | 510 | 686 | 9.78e-26 | 106 |
| MS.gene051710.t1 | MTR_4g081220 | 40.141 | 142 | 72 | 4 | 72 | 202 | 294 | 433 | 2.58e-17 | 81.6 |
| MS.gene051710.t1 | MTR_7g025580 | 31.366 | 322 | 88 | 10 | 72 | 261 | 194 | 514 | 1.03e-24 | 103 |
| MS.gene051710.t1 | MTR_4g133410 | 37.295 | 244 | 86 | 13 | 1 | 211 | 1 | 210 | 1.45e-24 | 98.6 |
| MS.gene051710.t1 | MTR_4g133410 | 51.748 | 143 | 28 | 8 | 1 | 115 | 1 | 130 | 3.28e-24 | 98.6 |
| MS.gene051710.t1 | MTR_4g133410 | 90.476 | 42 | 4 | 0 | 139 | 180 | 240 | 281 | 7.60e-17 | 78.6 |
| MS.gene051710.t1 | MTR_7g007510 | 41.007 | 139 | 27 | 2 | 178 | 261 | 418 | 556 | 1.52e-21 | 94.0 |
| MS.gene051710.t1 | MTR_7g007510 | 45.299 | 117 | 52 | 5 | 72 | 178 | 234 | 348 | 6.34e-15 | 74.7 |
| MS.gene051710.t1 | MTR_7g007510 | 56.250 | 80 | 17 | 3 | 1 | 69 | 1 | 73 | 6.26e-14 | 71.6 |
| MS.gene051710.t1 | MTR_7g025530 | 47.368 | 95 | 32 | 4 | 72 | 149 | 90 | 183 | 3.86e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051710.t1 | AT4G04790 | 43.119 | 109 | 56 | 2 | 140 | 243 | 491 | 598 | 4.65e-20 | 89.7 |
| MS.gene051710.t1 | AT4G04790 | 43.119 | 109 | 56 | 2 | 140 | 243 | 487 | 594 | 5.30e-20 | 89.7 |
| MS.gene051710.t1 | AT4G04790 | 43.119 | 109 | 56 | 2 | 140 | 243 | 354 | 461 | 1.08e-19 | 88.6 |
| MS.gene051710.t1 | AT4G21880 | 44.330 | 97 | 47 | 2 | 140 | 230 | 511 | 606 | 3.01e-19 | 87.4 |
| MS.gene051710.t1 | AT4G21880 | 44.330 | 97 | 47 | 2 | 140 | 230 | 467 | 562 | 4.05e-19 | 87.0 |
Find 43 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGTTGACGGTTGCCTC+TGG | 0.328039 | 7.3:+49531201 | MS.gene051710:CDS |
| TTCGCAGAACATCATCTTCA+TGG | 0.338187 | 7.3:+49526939 | MS.gene051710:CDS |
| TGACAGCAAGGCACATATTT+CGG | 0.342481 | 7.3:+49527225 | MS.gene051710:CDS |
| AAAACATCAGTGGTGGGTTA+AGG | 0.344761 | 7.3:+49530339 | MS.gene051710:CDS |
| TACACTTTCAGCTATTTGAT+TGG | 0.379942 | 7.3:+49530404 | MS.gene051710:CDS |
| AAGTTGGATATGCATGAATC+AGG | 0.385598 | 7.3:-49530919 | None:intergenic |
| AGGAGTTGAGTGGTCAAGAT+TGG | 0.392822 | 7.3:+49531183 | MS.gene051710:CDS |
| CTCCATGATGCTTCTTCCAC+AGG | 0.402828 | 7.3:+49526986 | MS.gene051710:CDS |
| AATTTCCTCACCTCAAAACT+TGG | 0.407050 | 7.3:-49527486 | None:intergenic |
| CATGTAGTATTATGAAGATA+TGG | 0.409221 | 7.3:+49530856 | MS.gene051710:intron |
| GTTTGCGGGATGAGAGAATC+AGG | 0.423999 | 7.3:-49526964 | None:intergenic |
| AAACATCAGTGGTGGGTTAA+GGG | 0.424857 | 7.3:+49530340 | MS.gene051710:CDS |
| GGAGTTGAGTGGTCAAGATT+GGG | 0.433630 | 7.3:+49531184 | MS.gene051710:CDS |
| TGCATAACTAGCAATGAAGT+TGG | 0.442831 | 7.3:-49527454 | None:intergenic |
| GAGGTTGCTTCTCCTACTTA+AGG | 0.448142 | 7.3:+49531163 | MS.gene051710:CDS |
| AGAAGCATCATGGAGTTTGC+GGG | 0.459430 | 7.3:-49526978 | None:intergenic |
| AGTGGTCAAGATTGGGTTGA+CGG | 0.460395 | 7.3:+49531191 | MS.gene051710:CDS |
| TATGAAGATATGGAACAATC+TGG | 0.474665 | 7.3:+49530866 | MS.gene051710:CDS |
| ACGGTTGCCTCTGGGCCATC+CGG | 0.483450 | 7.3:+49531210 | MS.gene051710:CDS |
| AGAAGCTTAAGCTTCTCAAC+AGG | 0.504936 | 7.3:-49527112 | None:intergenic |
| AAGAAGCATCATGGAGTTTG+CGG | 0.521355 | 7.3:-49526979 | None:intergenic |
| CTACGCTTCAACAAGACTAA+AGG | 0.523382 | 7.3:+49527138 | MS.gene051710:CDS |
| TTGGGTTGACGGTTGCCTCT+GGG | 0.527030 | 7.3:+49531202 | MS.gene051710:CDS |
| ACATCAAATTCACCGCAAGT+TGG | 0.541945 | 7.3:-49530935 | None:intergenic |
| GATGTGTTATGTAATTTACA+TGG | 0.543048 | 7.3:+49531131 | MS.gene051710:CDS |
| CAATTGAGAGGAAACAATTG+TGG | 0.574553 | 7.3:+49527167 | MS.gene051710:CDS |
| AACCTGTGGAAGAAGCATCA+TGG | 0.580756 | 7.3:-49526988 | None:intergenic |
| ATTTACATGGCGAGTTGGAG+AGG | 0.585953 | 7.3:+49531144 | MS.gene051710:CDS |
| GTGTTTAACTGAATACCGGA+TGG | 0.598488 | 7.3:-49531225 | None:intergenic |
| AGTTGGATATGCATGAATCA+GGG | 0.599687 | 7.3:-49530918 | None:intergenic |
| ATGTAATTTACATGGCGAGT+TGG | 0.602494 | 7.3:+49531139 | MS.gene051710:CDS |
| ACAATTGTGGATTTCTAGAG+CGG | 0.602704 | 7.3:+49527180 | MS.gene051710:CDS |
| AGCTTAAGCTTCTCAACAGG+AGG | 0.606426 | 7.3:-49527109 | None:intergenic |
| GACCACTCAACTCCTTAAGT+AGG | 0.607816 | 7.3:-49531175 | None:intergenic |
| ATATATTCGAATCATCAGAA+AGG | 0.615700 | 7.3:+49527281 | MS.gene051710:CDS |
| TAAAGGAACTAACAATTGAG+AGG | 0.632303 | 7.3:+49527155 | MS.gene051710:CDS |
| ATTCATGCATATCCAACTTG+CGG | 0.638699 | 7.3:+49530923 | MS.gene051710:CDS |
| GTATGAATCGAGCTTTACGT+TGG | 0.645167 | 7.3:-49530384 | None:intergenic |
| CTCCTACTTAAGGAGTTGAG+TGG | 0.649124 | 7.3:+49531173 | MS.gene051710:CDS |
| ACTTTGTGAAAGTGACAGCA+AGG | 0.655692 | 7.3:+49527213 | MS.gene051710:CDS |
| AAGGCTGCAGTTGAAATCTG+AGG | 0.656330 | 7.3:+49527300 | MS.gene051710:CDS |
| CTGAATACCGGATGGCCCAG+AGG | 0.679460 | 7.3:-49531217 | None:intergenic |
| ATGTAATGCAGATTATGATG+TGG | 0.699116 | 7.3:+49527422 | MS.gene051710:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTAAGAAATAAAAAAAAA+AGG | - | chr7.3:49529988-49530007 | None:intergenic | 10.0% |
| !!! | CAATTATAAGAATTAAATTT+TGG | + | chr7.3:49531453-49531472 | MS.gene051710:intron | 10.0% |
| !!! | CATGTTTTAAAAAATATTTT+TGG | + | chr7.3:49528695-49528714 | MS.gene051710:intron | 10.0% |
| !!! | TGTGTTTTTTATTTTATTTT+AGG | + | chr7.3:49529415-49529434 | MS.gene051710:intron | 10.0% |
| !!! | TTATTTTATTTTAGATCATA+CGG | + | chr7.3:49527334-49527353 | MS.gene051710:CDS | 10.0% |
| !! | ATGTAATTGTAAAAGTTTAA+GGG | - | chr7.3:49529738-49529757 | None:intergenic | 15.0% |
| !! | ATTGAAAAATCAAATATACA+AGG | - | chr7.3:49530810-49530829 | None:intergenic | 15.0% |
| !! | TATGTAATTGTAAAAGTTTA+AGG | - | chr7.3:49529739-49529758 | None:intergenic | 15.0% |
| !!! | AATTTCATATATTCAAGTTT+GGG | + | chr7.3:49530474-49530493 | MS.gene051710:intron | 15.0% |
| !!! | ATGTATTTTTTTTTTTGGAA+AGG | - | chr7.3:49530776-49530795 | None:intergenic | 15.0% |
| !!! | TAATTTCATATATTCAAGTT+TGG | + | chr7.3:49530473-49530492 | MS.gene051710:intron | 15.0% |
| !!! | TTGATAATAATATCAATACA+AGG | - | chr7.3:49527389-49527408 | None:intergenic | 15.0% |
| !!! | TTGATTTTCAATATAGAAAA+AGG | - | chr7.3:49529852-49529871 | None:intergenic | 15.0% |
| !!! | TTTAGGTTGAATAAAAAAAA+TGG | + | chr7.3:49529432-49529451 | MS.gene051710:intron | 15.0% |
| !!! | TTTATGTTCATTGTATATTT+TGG | + | chr7.3:49531312-49531331 | MS.gene051710:intron | 15.0% |
| !!! | TTTTTCTATATTGAAAATCA+AGG | + | chr7.3:49529851-49529870 | MS.gene051710:intron | 15.0% |
| !! | AAACTATTAGATAAACTGTT+TGG | + | chr7.3:49528600-49528619 | MS.gene051710:intron | 20.0% |
| !! | AAATATGGTTTATGATAGAA+GGG | + | chr7.3:49529612-49529631 | MS.gene051710:intron | 20.0% |
| !! | AACTTGGAATAACATAATAA+TGG | - | chr7.3:49527362-49527381 | None:intergenic | 20.0% |
| !! | AGTTAAATGAAAAAATTTGC+AGG | + | chr7.3:49529919-49529938 | MS.gene051710:intron | 20.0% |
| !! | ATAAAAATATACTATTGTGC+AGG | - | chr7.3:49528735-49528754 | None:intergenic | 20.0% |
| !! | ATACAATGAACATAAACAAA+TGG | - | chr7.3:49531308-49531327 | None:intergenic | 20.0% |
| !! | ATCTCAAAAAAAAAAATAGC+AGG | - | chr7.3:49529342-49529361 | None:intergenic | 20.0% |
| !! | ATGAAAGTAAATACATTATC+TGG | - | chr7.3:49530060-49530079 | None:intergenic | 20.0% |
| !! | CAGTTAAACACAAAAATTTA+AGG | + | chr7.3:49531237-49531256 | MS.gene051710:CDS | 20.0% |
| !! | GAAATTATATGTACAAGAAA+TGG | - | chr7.3:49530754-49530773 | None:intergenic | 20.0% |
| !! | TGAATTTGATGTTAAAAAAC+AGG | + | chr7.3:49530946-49530965 | MS.gene051710:CDS | 20.0% |
| !!! | ATTTCATATATTCAAGTTTG+GGG | + | chr7.3:49530475-49530494 | MS.gene051710:intron | 20.0% |
| !!! | GAAAGTTTTCTAGTTTTTTT+AGG | - | chr7.3:49526922-49526941 | None:intergenic | 20.0% |
| !!! | GTTCTTTTTATGTTATTGTT+GGG | + | chr7.3:49530672-49530691 | MS.gene051710:intron | 20.0% |
| !!! | GTTTATCTAATAGTTTTTCT+AGG | - | chr7.3:49528596-49528615 | None:intergenic | 20.0% |
| !!! | GTTTTAAAAAATTGATGATG+TGG | + | chr7.3:49529492-49529511 | MS.gene051710:intron | 20.0% |
| !!! | TAAAAAATATTTTTGGCTAC+CGG | + | chr7.3:49528702-49528721 | MS.gene051710:intron | 20.0% |
| !!! | TATTTTTACTGTTGATTTCA+TGG | + | chr7.3:49528761-49528780 | MS.gene051710:intron | 20.0% |
| !!! | TGTTCTTTTTATGTTATTGT+TGG | + | chr7.3:49530671-49530690 | MS.gene051710:intron | 20.0% |
| !!! | TTTTTAAAACATGTATGACA+TGG | - | chr7.3:49528688-49528707 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTTAACTCGAAA+TGG | - | chr7.3:49529914-49529933 | None:intergenic | 20.0% |
| ! | AAAAATTATGTCTTTCGCAT+CGG | - | chr7.3:49527682-49527701 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGAAGAAAAACA+TGG | - | chr7.3:49528354-49528373 | None:intergenic | 25.0% |
| ! | AAGAATCAATGCTTCAATTA+AGG | - | chr7.3:49529787-49529806 | None:intergenic | 25.0% |
| ! | AAGCAAATTTCAGATAAATG+TGG | + | chr7.3:49529099-49529118 | MS.gene051710:intron | 25.0% |
| ! | AATAACATAAAAAGAACACC+TGG | - | chr7.3:49530669-49530688 | None:intergenic | 25.0% |
| ! | AATATGGTTTATGATAGAAG+GGG | + | chr7.3:49529613-49529632 | MS.gene051710:intron | 25.0% |
| ! | AGAAACTGATCAACATAATT+GGG | + | chr7.3:49528175-49528194 | MS.gene051710:intron | 25.0% |
| ! | AGCAAATTTCAGATAAATGT+GGG | + | chr7.3:49529100-49529119 | MS.gene051710:intron | 25.0% |
| ! | AGTTATGCATGTGTAAAAAT+GGG | - | chr7.3:49529053-49529072 | None:intergenic | 25.0% |
| ! | ATATATTCGAATCATCAGAA+AGG | + | chr7.3:49527281-49527300 | MS.gene051710:CDS | 25.0% |
| ! | ATATTGTAGAAAAACATCAG+TGG | + | chr7.3:49530329-49530348 | MS.gene051710:intron | 25.0% |
| ! | ATCAATCATTGTACATTCTT+AGG | + | chr7.3:49531109-49531128 | MS.gene051710:intron | 25.0% |
| ! | CAAATATGGTTTATGATAGA+AGG | + | chr7.3:49529611-49529630 | MS.gene051710:intron | 25.0% |
| ! | CAACATATTGTTTGAAGAAA+TGG | - | chr7.3:49528392-49528411 | None:intergenic | 25.0% |
| ! | CATGTAGTATTATGAAGATA+TGG | + | chr7.3:49530856-49530875 | MS.gene051710:intron | 25.0% |
| ! | CTTCTATCATAAACCATATT+TGG | - | chr7.3:49529613-49529632 | None:intergenic | 25.0% |
| ! | CTTCTTTCTCTTCAATAATT+AGG | - | chr7.3:49528825-49528844 | None:intergenic | 25.0% |
| ! | GAATCATTATTCAAGTCATA+AGG | - | chr7.3:49531432-49531451 | None:intergenic | 25.0% |
| ! | GATGTGTTATGTAATTTACA+TGG | + | chr7.3:49531131-49531150 | MS.gene051710:CDS | 25.0% |
| ! | TAGAAAAGATGGTAGAAAAT+AGG | + | chr7.3:49528495-49528514 | MS.gene051710:intron | 25.0% |
| ! | TGTAACATACAACTATTGTA+AGG | - | chr7.3:49527706-49527725 | None:intergenic | 25.0% |
| ! | TTATTTAGAGGTTAATGAGT+TGG | + | chr7.3:49529585-49529604 | MS.gene051710:intron | 25.0% |
| !! | AAGAGAGAATTTGAAATGAA+GGG | - | chr7.3:49527992-49528011 | None:intergenic | 25.0% |
| !! | AAGCTAATTTTGTATTGTTG+TGG | + | chr7.3:49527854-49527873 | MS.gene051710:intron | 25.0% |
| !! | AATCTTCTTATATGGTTTGT+TGG | + | chr7.3:49527746-49527765 | MS.gene051710:intron | 25.0% |
| !! | ACAATGATTGATGAGTTTTA+AGG | - | chr7.3:49531101-49531120 | None:intergenic | 25.0% |
| !! | CACAAAAATTTAAGGTATGA+CGG | + | chr7.3:49531245-49531264 | MS.gene051710:intron | 25.0% |
| !! | TTTCATATATTCAAGTTTGG+GGG | + | chr7.3:49530476-49530495 | MS.gene051710:intron | 25.0% |
| !! | TTTTGTGTTTAACTGAATAC+CGG | - | chr7.3:49531232-49531251 | None:intergenic | 25.0% |
| !! | TTTTTCACTTATGCTTATGT+AGG | + | chr7.3:49528061-49528080 | MS.gene051710:intron | 25.0% |
| !!! | AATTAGCTTTTCATACATAG+AGG | - | chr7.3:49527843-49527862 | None:intergenic | 25.0% |
| !!! | ATGAGTTTTAAGGTTGAAAA+TGG | - | chr7.3:49531091-49531110 | None:intergenic | 25.0% |
| !!! | TTCTAGTTTTTTTAGGCAAA+AGG | - | chr7.3:49526915-49526934 | None:intergenic | 25.0% |
| !!! | TTTTTTTGAGGTATCATTGT+TGG | + | chr7.3:49530177-49530196 | MS.gene051710:intron | 25.0% |
| AACCATGTACAATGTCATTA+TGG | + | chr7.3:49530146-49530165 | MS.gene051710:intron | 30.0% | |
| AATTCTGCATTGTTCTTCAA+AGG | - | chr7.3:49528983-49529002 | None:intergenic | 30.0% | |
| ACCTCTAAATAATTCCAAAC+AGG | - | chr7.3:49529577-49529596 | None:intergenic | 30.0% | |
| ACGTAAAACAACTTCTTGTT+AGG | + | chr7.3:49528211-49528230 | MS.gene051710:intron | 30.0% | |
| ATCAATACAAGGAACAAACT+TGG | - | chr7.3:49527378-49527397 | None:intergenic | 30.0% | |
| ATGTAATGCAGATTATGATG+TGG | + | chr7.3:49527422-49527441 | MS.gene051710:intron | 30.0% | |
| CAGAAACTGATCAACATAAT+TGG | + | chr7.3:49528174-49528193 | MS.gene051710:intron | 30.0% | |
| CAGTAAATTTCACAAACAGT+TGG | - | chr7.3:49527043-49527062 | None:intergenic | 30.0% | |
| CAGTTATGCATGTGTAAAAA+TGG | - | chr7.3:49529054-49529073 | None:intergenic | 30.0% | |
| CATACAATTTGTCAAAAGAG+TGG | + | chr7.3:49528953-49528972 | MS.gene051710:intron | 30.0% | |
| CTTTGTTCATTCTCATACTA+CGG | + | chr7.3:49527900-49527919 | MS.gene051710:intron | 30.0% | |
| GAGTTGTTTAAACAGTTGAA+TGG | - | chr7.3:49531345-49531364 | None:intergenic | 30.0% | |
| GATTTGATACATAACAGTCA+TGG | + | chr7.3:49529275-49529294 | MS.gene051710:intron | 30.0% | |
| GCTTCAATTAAGGTGAAAAA+AGG | - | chr7.3:49529777-49529796 | None:intergenic | 30.0% | |
| TAAAGGAACTAACAATTGAG+AGG | + | chr7.3:49527155-49527174 | MS.gene051710:CDS | 30.0% | |
| TACACTTTCAGCTATTTGAT+TGG | + | chr7.3:49530404-49530423 | MS.gene051710:CDS | 30.0% | |
| TAGCTAGCAATCTTCTTATA+TGG | + | chr7.3:49527738-49527757 | MS.gene051710:intron | 30.0% | |
| TATGAAGATATGGAACAATC+TGG | + | chr7.3:49530866-49530885 | MS.gene051710:CDS | 30.0% | |
| TCTAAATAATTCCAAACAGG+AGG | - | chr7.3:49529574-49529593 | None:intergenic | 30.0% | |
| TGTATCAAATCTAACTTCTG+AGG | - | chr7.3:49529266-49529285 | None:intergenic | 30.0% | |
| TTAGAGTACAAAGATTATCC+AGG | + | chr7.3:49529017-49529036 | MS.gene051710:intron | 30.0% | |
| TTCATTTAACTCGAAATGGT+GGG | - | chr7.3:49529910-49529929 | None:intergenic | 30.0% | |
| TTGCAATTCATTAACCATCT+TGG | - | chr7.3:49530103-49530122 | None:intergenic | 30.0% | |
| TTTCATGTGTCTTATCTCTA+TGG | + | chr7.3:49530531-49530550 | MS.gene051710:intron | 30.0% | |
| TTTCATTTAACTCGAAATGG+TGG | - | chr7.3:49529911-49529930 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTCTTTGTTTAC+TGG | - | chr7.3:49529186-49529205 | None:intergenic | 30.0% |
| ! | AAACAGGTTCTTTGTTTACT+GGG | - | chr7.3:49529185-49529204 | None:intergenic | 30.0% |
| ! | AATTTTGTATTGTTGTGGCA+AGG | + | chr7.3:49527859-49527878 | MS.gene051710:intron | 30.0% |
| ! | ATTTAGCATTCCAAGTTTTG+AGG | + | chr7.3:49527476-49527495 | MS.gene051710:CDS | 30.0% |
| ! | CATTTTTACACATGCATAAC+TGG | + | chr7.3:49529052-49529071 | MS.gene051710:intron | 30.0% |
| ! | CTTTCTACAGTTTCTCTTTT+GGG | + | chr7.3:49530991-49531010 | MS.gene051710:intron | 30.0% |
| ! | GAAGAGAGAATTTGAAATGA+AGG | - | chr7.3:49527993-49528012 | None:intergenic | 30.0% |
| ! | GTTGATAAAATGTGTGTATC+AGG | + | chr7.3:49528104-49528123 | MS.gene051710:intron | 30.0% |
| ! | GTTTGTGTTTGACATTGTTT+TGG | + | chr7.3:49529240-49529259 | MS.gene051710:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | + | chr7.3:49529597-49529616 | MS.gene051710:intron | 30.0% |
| ! | TAGGAAAGTTGTTGTTAGAT+GGG | - | chr7.3:49528806-49528825 | None:intergenic | 30.0% |
| ! | TATTGGTCTCATGTATGTAT+AGG | + | chr7.3:49531507-49531526 | MS.gene051710:intron | 30.0% |
| ! | TCCTGTTTGGAATTATTTAG+AGG | + | chr7.3:49529573-49529592 | MS.gene051710:intron | 30.0% |
| ! | TCTACAATGGTATCTTTTGA+AGG | + | chr7.3:49530019-49530038 | MS.gene051710:intron | 30.0% |
| ! | TCTACCATCTTTTCTACTAT+AGG | - | chr7.3:49528491-49528510 | None:intergenic | 30.0% |
| ! | TCTTTCTACAGTTTCTCTTT+TGG | + | chr7.3:49530990-49531009 | MS.gene051710:intron | 30.0% |
| ! | TGAAAAAATTTGCAGGCTTT+TGG | + | chr7.3:49529926-49529945 | MS.gene051710:intron | 30.0% |
| ! | TTAGGAAAGTTGTTGTTAGA+TGG | - | chr7.3:49528807-49528826 | None:intergenic | 30.0% |
| ! | TTTCTACAGTTTCTCTTTTG+GGG | + | chr7.3:49530992-49531011 | MS.gene051710:intron | 30.0% |
| !! | AAGAAAAACATGGAAGTGTT+AGG | - | chr7.3:49528344-49528363 | None:intergenic | 30.0% |
| !! | AATGCAGTTTTGACAAATGA+TGG | - | chr7.3:49528032-49528051 | None:intergenic | 30.0% |
| !! | ATGGTTTGTTGGTAATTTGA+AGG | + | chr7.3:49527757-49527776 | MS.gene051710:intron | 30.0% |
| !! | GAGAGATATGCTTTTTGATA+AGG | + | chr7.3:49531394-49531413 | MS.gene051710:intron | 30.0% |
| !! | TGCAAAACTTGTTGTATGAT+GGG | - | chr7.3:49527609-49527628 | None:intergenic | 30.0% |
| !! | TGTATGCTTGTTTTCTACAA+TGG | + | chr7.3:49530006-49530025 | MS.gene051710:intron | 30.0% |
| !!! | ATGGCAGGATATTTTTTTTG+AGG | + | chr7.3:49530165-49530184 | MS.gene051710:intron | 30.0% |
| !!! | GTTGGGTTTTTTTTTTCCTT+GGG | + | chr7.3:49530689-49530708 | MS.gene051710:intron | 30.0% |
| !!! | GTTTTAAGGTTGAAAATGGA+AGG | - | chr7.3:49531087-49531106 | None:intergenic | 30.0% |
| !!! | TGTTGGGTTTTTTTTTTCCT+TGG | + | chr7.3:49530688-49530707 | MS.gene051710:intron | 30.0% |
| !!! | TTGTGTTGTTGTTTTTGTGA+AGG | + | chr7.3:49530612-49530631 | MS.gene051710:intron | 30.0% |
| AAAACTGAGATAGAAACCTG+TGG | - | chr7.3:49527005-49527024 | None:intergenic | 35.0% | |
| AAAGAGAATAAGCACACCAA+AGG | - | chr7.3:49530718-49530737 | None:intergenic | 35.0% | |
| AAGTTGGATATGCATGAATC+AGG | - | chr7.3:49530922-49530941 | None:intergenic | 35.0% | |
| AATATGCCATGTCCTTTACA+AGG | - | chr7.3:49531021-49531040 | None:intergenic | 35.0% | |
| AATATGTTGTGTTCGATGAG+TGG | + | chr7.3:49528403-49528422 | MS.gene051710:intron | 35.0% | |
| AATTTCCTCACCTCAAAACT+TGG | - | chr7.3:49527489-49527508 | None:intergenic | 35.0% | |
| AATTTGCAGATGAGATGAGA+TGG | + | chr7.3:49529127-49529146 | MS.gene051710:intron | 35.0% | |
| AGATGGTAGAAAATAGGCTA+AGG | + | chr7.3:49528501-49528520 | MS.gene051710:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr7.3:49528484-49528503 | MS.gene051710:intron | 35.0% | |
| AGTTGGATATGCATGAATCA+GGG | - | chr7.3:49530921-49530940 | None:intergenic | 35.0% | |
| ATATTGTCAGTCTCATGGTA+GGG | + | chr7.3:49531036-49531055 | MS.gene051710:intron | 35.0% | |
| ATGATGTGGACCAATAATTG+AGG | + | chr7.3:49529506-49529525 | MS.gene051710:intron | 35.0% | |
| ATGTAATTTACATGGCGAGT+TGG | + | chr7.3:49531139-49531158 | MS.gene051710:CDS | 35.0% | |
| ATGTACAATGTCATTATGGC+AGG | + | chr7.3:49530150-49530169 | MS.gene051710:intron | 35.0% | |
| ATTCATGCATATCCAACTTG+CGG | + | chr7.3:49530923-49530942 | MS.gene051710:CDS | 35.0% | |
| CAATTGAGAGGAAACAATTG+TGG | + | chr7.3:49527167-49527186 | MS.gene051710:CDS | 35.0% | |
| CGTAGTATGAGAATGAACAA+AGG | - | chr7.3:49527902-49527921 | None:intergenic | 35.0% | |
| GAGATAAGACACATGAAATC+AGG | - | chr7.3:49530529-49530548 | None:intergenic | 35.0% | |
| GCAAGAAATAAAGCCATAGT+GGG | + | chr7.3:49528924-49528943 | MS.gene051710:intron | 35.0% | |
| GTGTATGAAGCATGACATAT+TGG | + | chr7.3:49531490-49531509 | MS.gene051710:intron | 35.0% | |
| TCAAACACTCCCTCAATTAT+TGG | - | chr7.3:49529519-49529538 | None:intergenic | 35.0% | |
| TCAACTGTTTAAACAACTCG+AGG | + | chr7.3:49531346-49531365 | MS.gene051710:intron | 35.0% | |
| TCATTTAACTCGAAATGGTG+GGG | - | chr7.3:49529909-49529928 | None:intergenic | 35.0% | |
| TCTTAAAGTCATCCATGAGA+AGG | + | chr7.3:49527943-49527962 | MS.gene051710:intron | 35.0% | |
| TGATGTGGACCAATAATTGA+GGG | + | chr7.3:49529507-49529526 | MS.gene051710:intron | 35.0% | |
| TGCAAGAAATAAAGCCATAG+TGG | + | chr7.3:49528923-49528942 | MS.gene051710:intron | 35.0% | |
| TGCATAACTAGCAATGAAGT+TGG | - | chr7.3:49527457-49527476 | None:intergenic | 35.0% | |
| TGCCATAATGACATTGTACA+TGG | - | chr7.3:49530151-49530170 | None:intergenic | 35.0% | |
| TGGGTTCTTTGTTGAAAAAC+AGG | - | chr7.3:49529201-49529220 | None:intergenic | 35.0% | |
| TGTAGAAAAACATCAGTGGT+GGG | + | chr7.3:49530333-49530352 | MS.gene051710:intron | 35.0% | |
| TTCACTTATGCTTATGTAGG+TGG | + | chr7.3:49528064-49528083 | MS.gene051710:intron | 35.0% | |
| TTGATTTCATGGCCATTGAA+GGG | + | chr7.3:49528772-49528791 | MS.gene051710:intron | 35.0% | |
| TTGTAGAAAAACATCAGTGG+TGG | + | chr7.3:49530332-49530351 | MS.gene051710:intron | 35.0% | |
| ! | AAAATGGGTTCTTTGTTTCC+TGG | - | chr7.3:49529038-49529057 | None:intergenic | 35.0% |
| ! | AATACCCTTGATGATATGCA+AGG | + | chr7.3:49527520-49527539 | MS.gene051710:intron | 35.0% |
| ! | ACAATTGTGGATTTCTAGAG+CGG | + | chr7.3:49527180-49527199 | MS.gene051710:CDS | 35.0% |
| ! | TGTTATCGTTTTCCTTCTCA+TGG | - | chr7.3:49527958-49527977 | None:intergenic | 35.0% |
| !! | ACTTGTTGTATGATGGGATA+TGG | - | chr7.3:49527603-49527622 | None:intergenic | 35.0% |
| !! | CTGCAAAACTTGTTGTATGA+TGG | - | chr7.3:49527610-49527629 | None:intergenic | 35.0% |
| !!! | GTCCATTCTTCCTTTGTTTT+GGG | + | chr7.3:49530567-49530586 | MS.gene051710:intron | 35.0% |
| !!! | TGTTGTTTTTGTGAAGGTGT+TGG | + | chr7.3:49530618-49530637 | MS.gene051710:intron | 35.0% |
| AAAACCAACTACCTGCTAAC+CGG | - | chr7.3:49529477-49529496 | None:intergenic | 40.0% | |
| AAAAGACTCGTCCAATAGGT+GGG | + | chr7.3:49528262-49528281 | MS.gene051710:intron | 40.0% | |
| AAAAGTTTAAGGGTGAGCCT+TGG | - | chr7.3:49529728-49529747 | None:intergenic | 40.0% | |
| AACTGCCTTGCATATCATCA+AGG | - | chr7.3:49527528-49527547 | None:intergenic | 40.0% | |
| ACAACAATCGCATCTCATCT+GGG | - | chr7.3:49529220-49529239 | None:intergenic | 40.0% | |
| ACATCAAATTCACCGCAAGT+TGG | - | chr7.3:49530938-49530957 | None:intergenic | 40.0% | |
| ACTGCCTTGCATATCATCAA+GGG | - | chr7.3:49527527-49527546 | None:intergenic | 40.0% | |
| ACTTTGTGAAAGTGACAGCA+AGG | + | chr7.3:49527213-49527232 | MS.gene051710:CDS | 40.0% | |
| AGAAGCTTAAGCTTCTCAAC+AGG | - | chr7.3:49527115-49527134 | None:intergenic | 40.0% | |
| AGACTAGACGAGATAGGATT+AGG | + | chr7.3:49528430-49528449 | MS.gene051710:intron | 40.0% | |
| AGTGAGATTAGAAGAGGTAG+AGG | + | chr7.3:49528566-49528585 | MS.gene051710:intron | 40.0% | |
| ATGGCATATTGTCAGTCTCA+TGG | + | chr7.3:49531031-49531050 | MS.gene051710:intron | 40.0% | |
| CATATTGTCAGTCTCATGGT+AGG | + | chr7.3:49531035-49531054 | MS.gene051710:intron | 40.0% | |
| CATGTGTCTTATCTCTATGG+TGG | + | chr7.3:49530534-49530553 | MS.gene051710:intron | 40.0% | |
| CTACGCTTCAACAAGACTAA+AGG | + | chr7.3:49527138-49527157 | MS.gene051710:CDS | 40.0% | |
| GAAAATAGGCTAAGGTGGTT+TGG | + | chr7.3:49528509-49528528 | MS.gene051710:intron | 40.0% | |
| GAATGACACCATTAGAGAGA+GGG | + | chr7.3:49528452-49528471 | MS.gene051710:intron | 40.0% | |
| GTATGAATCGAGCTTTACGT+TGG | - | chr7.3:49530387-49530406 | None:intergenic | 40.0% | |
| GTGTTTAACTGAATACCGGA+TGG | - | chr7.3:49531228-49531247 | None:intergenic | 40.0% | |
| TCACGTGACAACAACTTTAC+CGG | + | chr7.3:49529698-49529717 | MS.gene051710:intron | 40.0% | |
| TGACAGCAAGGCACATATTT+CGG | + | chr7.3:49527225-49527244 | MS.gene051710:CDS | 40.0% | |
| TGAGAAAAGACCTGATCAGA+CGG | + | chr7.3:49528538-49528557 | MS.gene051710:intron | 40.0% | |
| TGCCCAAAACAAAGGAAGAA+TGG | - | chr7.3:49530572-49530591 | None:intergenic | 40.0% | |
| TGGTAGAAAATAGGCTAAGG+TGG | + | chr7.3:49528504-49528523 | MS.gene051710:intron | 40.0% | |
| TTCGCAGAACATCATCTTCA+TGG | + | chr7.3:49526939-49526958 | MS.gene051710:CDS | 40.0% | |
| TTGAAGGTTGAGCATGTCAT+AGG | + | chr7.3:49527773-49527792 | MS.gene051710:intron | 40.0% | |
| TTGTCACGTGAGTGAAAGAA+AGG | - | chr7.3:49529689-49529708 | None:intergenic | 40.0% | |
| ! | ACAAGTTGAAGTCCTCCAAA+TGG | - | chr7.3:49529644-49529663 | None:intergenic | 40.0% |
| ! | ACCTATTGGACGAGTCTTTT+GGG | - | chr7.3:49528262-49528281 | None:intergenic | 40.0% |
| ! | CTATTGTGCAGGTTTAGAAC+CGG | - | chr7.3:49528724-49528743 | None:intergenic | 40.0% |
| ! | CTTTTCATACATAGAGGACG+CGG | - | chr7.3:49527837-49527856 | None:intergenic | 40.0% |
| ! | GTTGATTTCATGGCCATTGA+AGG | + | chr7.3:49528771-49528790 | MS.gene051710:intron | 40.0% |
| ! | TCTTATCTCTATGGTGGAGT+TGG | + | chr7.3:49530540-49530559 | MS.gene051710:intron | 40.0% |
| ! | TTTTCATACATAGAGGACGC+GGG | - | chr7.3:49527836-49527855 | None:intergenic | 40.0% |
| !! | AAAACATCAGTGGTGGGTTA+AGG | + | chr7.3:49530339-49530358 | MS.gene051710:CDS | 40.0% |
| !! | AAACATCAGTGGTGGGTTAA+GGG | + | chr7.3:49530340-49530359 | MS.gene051710:CDS | 40.0% |
| !! | AAGAAGCATCATGGAGTTTG+CGG | - | chr7.3:49526982-49527001 | None:intergenic | 40.0% |
| !! | GGTCCATTCTTCCTTTGTTT+TGG | + | chr7.3:49530566-49530585 | MS.gene051710:intron | 40.0% |
| !! | GTAGCTAAAAGTGCTTGATG+TGG | - | chr7.3:49528308-49528327 | None:intergenic | 40.0% |
| !! | TTGTATGTCGATTCCCACTA+TGG | - | chr7.3:49528940-49528959 | None:intergenic | 40.0% |
| !!! | TTATTGCCCATTTTGACTGC+CGG | + | chr7.3:49527649-49527668 | MS.gene051710:intron | 40.0% |
| AACACCTGGAACACTACTAG+GGG | - | chr7.3:49530655-49530674 | None:intergenic | 45.0% | |
| AAGGCTGCAGTTGAAATCTG+AGG | + | chr7.3:49527300-49527319 | MS.gene051710:CDS | 45.0% | |
| AAGTGTTAGGAGTCCCACAT+CGG | - | chr7.3:49528331-49528350 | None:intergenic | 45.0% | |
| ACATGGCCCAATCAAAGAGA+GGG | - | chr7.3:49528671-49528690 | None:intergenic | 45.0% | |
| ACCATTAGAGAGAGGGAGTT+GGG | + | chr7.3:49528459-49528478 | MS.gene051710:intron | 45.0% | |
| ACCCAAAAGACTCGTCCAAT+AGG | + | chr7.3:49528258-49528277 | MS.gene051710:intron | 45.0% | |
| AGAACACCTGGAACACTACT+AGG | - | chr7.3:49530657-49530676 | None:intergenic | 45.0% | |
| AGCTTAAGCTTCTCAACAGG+AGG | - | chr7.3:49527112-49527131 | None:intergenic | 45.0% | |
| AGGAGTTGAGTGGTCAAGAT+TGG | + | chr7.3:49531183-49531202 | MS.gene051710:CDS | 45.0% | |
| AGGTCACGAGTGTGACTAAA+AGG | - | chr7.3:49529669-49529688 | None:intergenic | 45.0% | |
| AGGTTGAGCATGTCATAGGA+AGG | + | chr7.3:49527777-49527796 | MS.gene051710:intron | 45.0% | |
| AGTTGAAGTCCTCCAAATGG+TGG | - | chr7.3:49529641-49529660 | None:intergenic | 45.0% | |
| ATAGAAGGGGTTCCACCATT+TGG | + | chr7.3:49529626-49529645 | MS.gene051710:intron | 45.0% | |
| ATCAAAGAGAGGGTGGCTAA+AGG | - | chr7.3:49528661-49528680 | None:intergenic | 45.0% | |
| CAAAAGACTCGTCCAATAGG+TGG | + | chr7.3:49528261-49528280 | MS.gene051710:intron | 45.0% | |
| CAAGAAATTTCCCTCCCTCA+TGG | - | chr7.3:49530595-49530614 | None:intergenic | 45.0% | |
| CACAACAATCGCATCTCATC+TGG | - | chr7.3:49529221-49529240 | None:intergenic | 45.0% | |
| CGAGAATTTGCATGGTGTGT+TGG | + | chr7.3:49527802-49527821 | MS.gene051710:intron | 45.0% | |
| CTCCTACTTAAGGAGTTGAG+TGG | + | chr7.3:49531173-49531192 | MS.gene051710:CDS | 45.0% | |
| GAACACCTGGAACACTACTA+GGG | - | chr7.3:49530656-49530675 | None:intergenic | 45.0% | |
| GACCACTCAACTCCTTAAGT+AGG | - | chr7.3:49531178-49531197 | None:intergenic | 45.0% | |
| GAGAATAAGCACACCAAAGG+TGG | - | chr7.3:49530715-49530734 | None:intergenic | 45.0% | |
| GAGGAGAGTGAGATTAGAAG+AGG | + | chr7.3:49528560-49528579 | MS.gene051710:intron | 45.0% | |
| GAGGTTGCTTCTCCTACTTA+AGG | + | chr7.3:49531163-49531182 | MS.gene051710:CDS | 45.0% | |
| GATGTGGTACTTAAGCCATG+AGG | - | chr7.3:49528292-49528311 | None:intergenic | 45.0% | |
| GGAAGAGCAATGCTATTGTC+AGG | + | chr7.3:49528621-49528640 | MS.gene051710:intron | 45.0% | |
| GGAAGGATCGAGAATTTGCA+TGG | + | chr7.3:49527794-49527813 | MS.gene051710:intron | 45.0% | |
| GGAATGACACCATTAGAGAG+AGG | + | chr7.3:49528451-49528470 | MS.gene051710:intron | 45.0% | |
| GGAGTTGAGTGGTCAAGATT+GGG | + | chr7.3:49531184-49531203 | MS.gene051710:CDS | 45.0% | |
| GGTACAAGACTAGACGAGAT+AGG | + | chr7.3:49528424-49528443 | MS.gene051710:intron | 45.0% | |
| GTATTGTTGTGGCAAGGACA+TGG | + | chr7.3:49527865-49527884 | MS.gene051710:intron | 45.0% | |
| GTTTGAATGTGCGTCCAAGA+TGG | + | chr7.3:49530086-49530105 | MS.gene051710:intron | 45.0% | |
| TAGCCACCCTCTCTTTGATT+GGG | + | chr7.3:49528662-49528681 | MS.gene051710:intron | 45.0% | |
| TGTGAGTAAACCAGCATAGC+CGG | + | chr7.3:49529455-49529474 | MS.gene051710:intron | 45.0% | |
| TGTTAGGACTTAAGCCCATG+AGG | + | chr7.3:49528227-49528246 | MS.gene051710:intron | 45.0% | |
| TTAGCCACCCTCTCTTTGAT+TGG | + | chr7.3:49528661-49528680 | MS.gene051710:intron | 45.0% | |
| ! | ATTTACATGGCGAGTTGGAG+AGG | + | chr7.3:49531144-49531163 | MS.gene051710:CDS | 45.0% |
| ! | CACCTATTGGACGAGTCTTT+TGG | - | chr7.3:49528263-49528282 | None:intergenic | 45.0% |
| ! | TTAACTCGAAATGGTGGGGA+TGG | - | chr7.3:49529905-49529924 | None:intergenic | 45.0% |
| !! | AACCTGTGGAAGAAGCATCA+TGG | - | chr7.3:49526991-49527010 | None:intergenic | 45.0% |
| !! | AGAAGCATCATGGAGTTTGC+GGG | - | chr7.3:49526981-49527000 | None:intergenic | 45.0% |
| !! | AGTGGTCAAGATTGGGTTGA+CGG | + | chr7.3:49531191-49531210 | MS.gene051710:CDS | 45.0% |
| !! | ATGTCTTTCGCATCGGTTTC+TGG | - | chr7.3:49527675-49527694 | None:intergenic | 45.0% |
| !! | ATTGGACGAGTCTTTTGGGT+TGG | - | chr7.3:49528258-49528277 | None:intergenic | 45.0% |
| !! | CACTTTTAGCTACCCGATGT+GGG | + | chr7.3:49528315-49528334 | MS.gene051710:intron | 45.0% |
| !!! | CTTTGTTTTGGGCACCATGA+GGG | + | chr7.3:49530578-49530597 | MS.gene051710:intron | 45.0% |
| !!! | CTTTTGGGGTGACCTTGTAA+AGG | + | chr7.3:49531006-49531025 | MS.gene051710:intron | 45.0% |
| !!! | GCATTCCAAGTTTTGAGGTG+AGG | + | chr7.3:49527481-49527500 | MS.gene051710:intron | 45.0% |
| !!! | GGAGATTTTTTTCCCCTGAG+AGG | + | chr7.3:49529296-49529315 | MS.gene051710:intron | 45.0% |
| !!! | TTGGACGAGTCTTTTGGGTT+GGG | - | chr7.3:49528257-49528276 | None:intergenic | 45.0% |
| !!! | TTTTTTCCTTGGGCCACCTT+TGG | + | chr7.3:49530699-49530718 | MS.gene051710:intron | 45.0% |
| !! | ATAAAATCATAATTTAATAT+TGG | - | chr7.3:49531281-49531300 | None:intergenic | 5.0% |
| !! | TAAAATCATAATTTAATATT+GGG | - | chr7.3:49531280-49531299 | None:intergenic | 5.0% |
| !!! | AATATATGTATTTTTTTTTT+TGG | - | chr7.3:49530781-49530800 | None:intergenic | 5.0% |
| ACAACTTTACCGGTGCTCCA+AGG | + | chr7.3:49529708-49529727 | MS.gene051710:intron | 50.0% | |
| ACACCTGGAACACTACTAGG+GGG | - | chr7.3:49530654-49530673 | None:intergenic | 50.0% | |
| AGACCAAAAACCGCGCTCAA+AGG | - | chr7.3:49530502-49530521 | None:intergenic | 50.0% | |
| AGTGTTAGGAGTCCCACATC+GGG | - | chr7.3:49528330-49528349 | None:intergenic | 50.0% | |
| ATAGCCGGTTAGCAGGTAGT+TGG | + | chr7.3:49529470-49529489 | MS.gene051710:intron | 50.0% | |
| CACCATTAGAGAGAGGGAGT+TGG | + | chr7.3:49528458-49528477 | MS.gene051710:intron | 50.0% | |
| CAGCTAGCATTCCTCCTGTT+TGG | + | chr7.3:49529560-49529579 | MS.gene051710:intron | 50.0% | |
| CCATTAGAGAGAGGGAGTTG+GGG | + | chr7.3:49528460-49528479 | MS.gene051710:intron | 50.0% | |
| CCTCATGGTGCCCAAAACAA+AGG | - | chr7.3:49530580-49530599 | None:intergenic | 50.0% | |
| CTCCATGATGCTTCTTCCAC+AGG | + | chr7.3:49526986-49527005 | MS.gene051710:CDS | 50.0% | |
| CTTCGTGACTGTTCCTCTCA+GGG | - | chr7.3:49529312-49529331 | None:intergenic | 50.0% | |
| GAAAAGACCTGATCAGACGG+AGG | + | chr7.3:49528541-49528560 | MS.gene051710:intron | 50.0% | |
| GACATGGCCCAATCAAAGAG+AGG | - | chr7.3:49528672-49528691 | None:intergenic | 50.0% | |
| GGGTGACCTTGTAAAGGACA+TGG | + | chr7.3:49531012-49531031 | MS.gene051710:intron | 50.0% | |
| GTTTGCGGGATGAGAGAATC+AGG | - | chr7.3:49526967-49526986 | None:intergenic | 50.0% | |
| TGGGAAAGACGACCCTTCAA+TGG | - | chr7.3:49528787-49528806 | None:intergenic | 50.0% | |
| TTCGTGACTGTTCCTCTCAG+GGG | - | chr7.3:49529311-49529330 | None:intergenic | 50.0% | |
| TTCTGGCCGGCAGTCAAAAT+GGG | - | chr7.3:49527658-49527677 | None:intergenic | 50.0% | |
| ! | TCTCTATGGTGGAGTTGGCT+TGG | + | chr7.3:49530545-49530564 | MS.gene051710:intron | 50.0% |
| ! | TTTCTGGCCGGCAGTCAAAA+TGG | - | chr7.3:49527659-49527678 | None:intergenic | 50.0% |
| !! | GCACTTTTAGCTACCCGATG+TGG | + | chr7.3:49528314-49528333 | MS.gene051710:intron | 50.0% |
| !!! | CCTTTGTTTTGGGCACCATG+AGG | + | chr7.3:49530577-49530596 | MS.gene051710:intron | 50.0% |
| AACCAGCATAGCCGGTTAGC+AGG | + | chr7.3:49529463-49529482 | MS.gene051710:intron | 55.0% | |
| CAATAGGTGGGAGAGCCTCA+TGG | + | chr7.3:49528274-49528293 | MS.gene051710:intron | 55.0% | |
| CATGAGGCTCTCCCACCTAT+TGG | - | chr7.3:49528276-49528295 | None:intergenic | 55.0% | |
| CCCCAACTCCCTCTCTCTAA+TGG | - | chr7.3:49528463-49528482 | None:intergenic | 55.0% | |
| GAAGGGGTTCCACCATTTGG+AGG | + | chr7.3:49529629-49529648 | MS.gene051710:intron | 55.0% | |
| GCTTCGTGACTGTTCCTCTC+AGG | - | chr7.3:49529313-49529332 | None:intergenic | 55.0% | |
| GTGGGGATGGCGACTTATGA+TGG | - | chr7.3:49529892-49529911 | None:intergenic | 55.0% | |
| GTTCCCCCTAGTAGTGTTCC+AGG | + | chr7.3:49530648-49530667 | MS.gene051710:intron | 55.0% | |
| TACCTGCTAACCGGCTATGC+TGG | - | chr7.3:49529468-49529487 | None:intergenic | 55.0% | |
| TCACTCTCCTCCGTCTGATC+AGG | - | chr7.3:49528551-49528570 | None:intergenic | 55.0% | |
| TGGCCCAATCAAAGAGAGGG+TGG | - | chr7.3:49528668-49528687 | None:intergenic | 55.0% | |
| !! | ATTGGGTTGACGGTTGCCTC+TGG | + | chr7.3:49531201-49531220 | MS.gene051710:CDS | 55.0% |
| !! | CTTTCGCATCGGTTTCTGGC+CGG | - | chr7.3:49527671-49527690 | None:intergenic | 55.0% |
| !! | GTTTTGGGCACCATGAGGGA+GGG | + | chr7.3:49530582-49530601 | MS.gene051710:intron | 55.0% |
| !! | TGTTTTGGGCACCATGAGGG+AGG | + | chr7.3:49530581-49530600 | MS.gene051710:intron | 55.0% |
| !! | TTGGGTTGACGGTTGCCTCT+GGG | + | chr7.3:49531202-49531221 | MS.gene051710:CDS | 55.0% |
| !! | TTGGGTTGGGCTCTCCTCAT+GGG | - | chr7.3:49528244-49528263 | None:intergenic | 55.0% |
| !! | TTTGGGTTGGGCTCTCCTCA+TGG | - | chr7.3:49528245-49528264 | None:intergenic | 55.0% |
| AAGGGTGAGCCTTGGAGCAC+CGG | - | chr7.3:49529720-49529739 | None:intergenic | 60.0% | |
| AGCACACCAAAGGTGGCCCA+AGG | - | chr7.3:49530708-49530727 | None:intergenic | 60.0% | |
| AGTTTGGGGGCCTTTGAGCG+CGG | + | chr7.3:49530489-49530508 | MS.gene051710:intron | 60.0% | |
| CTGAATACCGGATGGCCCAG+AGG | - | chr7.3:49531220-49531239 | None:intergenic | 60.0% | |
| ! | GGGCCTTTGAGCGCGGTTTT+TGG | + | chr7.3:49530496-49530515 | MS.gene051710:intron | 60.0% |
| ACGGTTGCCTCTGGGCCATC+CGG | + | chr7.3:49531210-49531229 | MS.gene051710:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 49526905 | 49531541 | 49526905 | ID=MS.gene051710 |
| chr7.3 | mRNA | 49526905 | 49531541 | 49526905 | ID=MS.gene051710.t1;Parent=MS.gene051710 |
| chr7.3 | exon | 49526905 | 49527007 | 49526905 | ID=MS.gene051710.t1.exon1;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49526905 | 49527007 | 49526905 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49527104 | 49527355 | 49527104 | ID=MS.gene051710.t1.exon2;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49527104 | 49527355 | 49527104 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49527433 | 49527497 | 49527433 | ID=MS.gene051710.t1.exon3;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49527433 | 49527497 | 49527433 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49530338 | 49530457 | 49530338 | ID=MS.gene051710.t1.exon4;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49530338 | 49530457 | 49530338 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49530863 | 49530967 | 49530863 | ID=MS.gene051710.t1.exon5;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49530863 | 49530967 | 49530863 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49531131 | 49531258 | 49531131 | ID=MS.gene051710.t1.exon6;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49531131 | 49531258 | 49531131 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| chr7.3 | exon | 49531529 | 49531541 | 49531529 | ID=MS.gene051710.t1.exon7;Parent=MS.gene051710.t1 |
| chr7.3 | CDS | 49531529 | 49531541 | 49531529 | ID=cds.MS.gene051710.t1;Parent=MS.gene051710.t1 |
| Gene Sequence |
| Protein sequence |
