AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38571

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38571.t1 MTR_3g099753 93.928 527 28 1 1 523 1 527 0.0 1009
MS.gene38571.t1 MTR_3g099753 92.734 523 18 1 1 523 1 503 0.0 996
MS.gene38571.t1 MTR_1g072300 31.138 501 329 8 28 518 2 496 2.70e-75 247
MS.gene38571.t1 MTR_8g007375 28.536 403 276 4 119 518 6 399 3.72e-63 212
MS.gene38571.t1 MTR_8g059115 32.051 390 261 3 123 511 9 395 6.68e-62 209
MS.gene38571.t1 MTR_2g013450 28.041 485 341 4 40 519 7 488 3.37e-60 206
MS.gene38571.t1 MTR_8g465890 28.894 443 291 9 75 506 45 474 4.56e-59 203
MS.gene38571.t1 MTR_8g069570 29.442 394 273 3 77 468 43 433 1.05e-57 199
MS.gene38571.t1 MTR_1g022400 29.602 402 274 5 6 405 8 402 1.41e-56 194
MS.gene38571.t1 MTR_2g047855 28.916 415 277 8 61 466 32 437 3.92e-56 196
MS.gene38571.t1 MTR_2g090290 29.929 421 282 5 74 486 49 464 1.14e-52 186
MS.gene38571.t1 MTR_1g086820 28.606 416 282 7 56 466 30 435 7.18e-52 184
MS.gene38571.t1 MTR_8g031520 31.844 179 119 2 76 253 123 299 1.35e-29 118
MS.gene38571.t1 MTR_7g089770 23.974 463 323 10 54 508 156 597 1.13e-26 114
MS.gene38571.t1 MTR_1g050750 24.773 440 307 11 76 508 109 531 4.56e-26 112
MS.gene38571.t1 MTR_2g096880 20.469 469 363 6 57 519 41 505 1.99e-19 91.7
MS.gene38571.t1 MTR_8g031510 26.590 173 117 3 349 518 1 166 7.59e-15 73.2
MS.gene38571.t1 MTR_1g048080 24.232 293 197 6 65 355 578 847 3.95e-13 72.8
MS.gene38571.t1 MTR_8g054410 23.810 273 203 3 160 431 214 482 1.73e-12 70.5
MS.gene38571.t1 MTR_7g091410 23.669 338 233 11 99 422 96 422 1.16e-11 67.8
MS.gene38571.t1 MTR_7g091410 23.669 338 233 11 99 422 300 626 1.18e-11 67.8
MS.gene38571.t1 MTR_7g091410 23.669 338 233 11 99 422 55 381 1.23e-11 67.4
MS.gene38571.t1 MTR_7g091410 23.669 338 233 11 99 422 161 487 1.46e-11 67.4
MS.gene38571.t1 MTR_8g039270 22.393 326 241 5 164 487 171 486 3.93e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38571.t1 AT5G27460 53.895 475 211 4 39 508 20 491 3.79e-178 510
MS.gene38571.t1 AT1G02150 34.375 384 246 3 76 458 86 464 4.60e-80 259
MS.gene38571.t1 AT4G02820 30.802 474 322 4 46 519 50 517 8.94e-78 254
MS.gene38571.t1 AT4G21705 29.892 465 322 3 56 518 24 486 6.33e-69 229
MS.gene38571.t1 AT1G02370 28.667 450 309 5 76 519 90 533 8.66e-66 223
MS.gene38571.t1 AT2G20710 30.465 430 294 4 34 462 15 440 4.51e-64 217
MS.gene38571.t1 AT1G60770 31.738 397 264 4 126 518 91 484 2.11e-61 209
MS.gene38571.t1 AT4G01990 27.865 445 313 4 76 518 59 497 4.06e-57 198
MS.gene38571.t1 AT5G09450 31.105 344 232 4 55 395 53 394 2.96e-56 194
MS.gene38571.t1 AT2G20710 30.946 349 236 4 115 462 1 345 5.40e-48 171
MS.gene38571.t1 AT1G28020 30.675 326 214 4 74 393 53 372 2.31e-43 161
MS.gene38571.t1 AT1G28020 33.929 112 66 3 67 177 385 489 7.73e-11 64.7
MS.gene38571.t1 AT1G80270 23.570 437 313 10 76 506 147 568 5.18e-28 118
MS.gene38571.t1 AT1G80270 23.570 437 313 10 76 506 147 568 5.18e-28 118
MS.gene38571.t1 AT1G80270 23.570 437 313 10 76 506 147 568 5.18e-28 118
MS.gene38571.t1 AT1G80270 23.570 437 313 10 76 506 147 568 5.18e-28 118
MS.gene38571.t1 AT1G80270 23.570 437 313 10 76 506 147 568 5.18e-28 118
MS.gene38571.t1 AT1G15480 22.146 438 322 9 76 508 145 568 1.63e-24 107
MS.gene38571.t1 AT3G11380 27.653 311 186 8 92 398 78 353 7.81e-21 96.3
MS.gene38571.t1 AT3G11380 32.044 181 114 4 72 243 360 540 5.21e-15 78.2
MS.gene38571.t1 AT3G15590 22.917 432 322 6 76 506 160 581 2.37e-20 95.1
MS.gene38571.t1 AT3G15590 22.917 432 322 6 76 506 160 581 2.37e-20 95.1
MS.gene38571.t1 AT1G28000 26.457 223 157 4 75 293 51 270 1.07e-18 88.6
MS.gene38571.t1 AT1G43010 28.638 213 142 3 74 285 53 256 7.20e-18 84.0
MS.gene38571.t1 AT1G07590 21.491 456 350 6 68 519 76 527 6.82e-17 84.0
MS.gene38571.t1 AT2G31400 25.000 268 197 3 160 426 270 534 2.39e-14 76.6
MS.gene38571.t1 AT2G31400 25.000 268 197 3 160 426 270 534 2.45e-14 76.6
MS.gene38571.t1 AT2G32630 24.014 279 189 7 158 426 294 559 4.57e-12 68.9
MS.gene38571.t1 AT3G06920 20.968 310 229 7 159 464 169 466 6.46e-12 68.9
MS.gene38571.t1 AT3G06920 20.968 310 229 7 159 464 183 480 6.79e-12 68.9
MS.gene38571.t1 AT3G06920 20.968 310 229 7 159 464 183 480 6.79e-12 68.9
MS.gene38571.t1 AT5G02860 18.974 390 265 9 88 433 134 516 7.06e-11 65.5
MS.gene38571.t1 AT5G02860 18.974 390 265 9 88 433 134 516 7.06e-11 65.5
MS.gene38571.t1 AT5G02860 18.974 390 265 9 88 433 134 516 7.06e-11 65.5
MS.gene38571.t1 AT5G02860 18.974 390 265 9 88 433 134 516 7.06e-11 65.5
MS.gene38571.t1 AT5G02860 18.974 390 265 9 88 433 134 516 7.06e-11 65.5

Find 111 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGCCAGTGCTTCAAAAT+TGG 0.126495 3.2:+82822337 MS.gene38571:CDS
GAGACTGTTTCCATTCTTAA+AGG 0.176026 3.2:+82825845 MS.gene38571:CDS
ATTAGCCATAGCTGAATATT+TGG 0.185459 3.2:+82825652 MS.gene38571:CDS
AGTTTCATCATTTCATTATA+AGG 0.208074 3.2:-82824891 None:intergenic
TCTTCCACCAACTGCCTTAC+TGG 0.224446 3.2:-82825285 None:intergenic
CCATTCTCTGAAGATTCTTC+TGG 0.238798 3.2:-82825372 None:intergenic
CATGAACGTCTCAGCTTTAC+TGG 0.276241 3.2:-82824829 None:intergenic
ATCACAGATATTCATAATTT+AGG 0.309949 3.2:+82825710 MS.gene38571:CDS
ATTTCCCACGTCTTGTAGTT+TGG 0.313223 3.2:-82825518 None:intergenic
TTTGGATTTGATGAGCCTTC+TGG 0.315146 3.2:-82822406 None:intergenic
AATGATCAATAAAGACAAAA+TGG 0.322417 3.2:+82825811 MS.gene38571:CDS
CTGCGAAGAGAAGAAGTATA+TGG 0.336111 3.2:-82822189 None:intergenic
GTTTCATCATTTCATTATAA+GGG 0.337687 3.2:-82824890 None:intergenic
GATATTCATAATTTAGGTCT+TGG 0.351730 3.2:+82825716 MS.gene38571:CDS
TGTGATGAGGGAGAGCGATA+TGG 0.373547 3.2:+82825020 MS.gene38571:CDS
GGCAATGGAGTTTGCGTTGA+AGG 0.373565 3.2:-82822321 None:intergenic
AAATGATGAGAATGTTGAAA+TGG 0.383490 3.2:+82825079 MS.gene38571:CDS
CCCAGTGAAGCCTTTAAGAA+TGG 0.389532 3.2:-82825855 None:intergenic
ATGTTCTGTCTTACAACCTT+TGG 0.391181 3.2:+82824988 MS.gene38571:CDS
ATTGCCAGTGCTTCAAAATT+GGG 0.393171 3.2:+82822338 MS.gene38571:CDS
CATGGAGAAGCTCTATGAAC+TGG 0.396411 3.2:+82824848 MS.gene38571:CDS
TATTGCCATGAAAAGAGCTT+TGG 0.402179 3.2:+82825586 MS.gene38571:CDS
AACTTCAGAGCATGATCAGC+TGG 0.404901 3.2:-82824681 None:intergenic
TCCATTCTTAAAGGCTTCAC+TGG 0.406952 3.2:+82825854 MS.gene38571:CDS
TAACAAGCTTGGTGAAGCTT+GGG 0.412299 3.2:+82825336 MS.gene38571:CDS
GGATAACTAGGGGTACCTTT+TGG 0.413093 3.2:-82824935 None:intergenic
CTTAAAGGCTTCACTGGGTA+AGG 0.413189 3.2:+82825860 MS.gene38571:CDS
AGGAGGGAGTCTTGCGGCTG+TGG 0.422261 3.2:+82825258 MS.gene38571:CDS
GCTTTCTTTCCAGCTGAGTC+AGG 0.427827 3.2:-82824762 None:intergenic
CAGTAAAGCTGAGACGTTCA+TGG 0.430914 3.2:+82824830 MS.gene38571:CDS
TCATTGAAGGATATGTCAAT+TGG 0.432642 3.2:+82825543 MS.gene38571:CDS
TTTGCACACAGGTATTCAAC+TGG 0.435844 3.2:+82824628 MS.gene38571:intron
GAATGCGTGATTGTAGCGTT+TGG 0.439592 3.2:-82822424 None:intergenic
TGTTAGTATGCAAATATAGT+TGG 0.439822 3.2:-82825318 None:intergenic
CCAGAAGAATCTTCAGAGAA+TGG 0.455350 3.2:+82825372 MS.gene38571:CDS
GTGATGAGGGAGAGCGATAT+GGG 0.460171 3.2:+82825021 MS.gene38571:CDS
ACATGTAGACAGTTTCTCTT+CGG 0.461851 3.2:-82825183 None:intergenic
AATGATGAGAATGTTGAAAT+GGG 0.468069 3.2:+82825080 MS.gene38571:CDS
AGCTGATCATGCTCTGAAGT+TGG 0.470813 3.2:+82824683 MS.gene38571:CDS
GCCACGTAGAAGTGGGAGAT+AGG 0.471094 3.2:-82824787 None:intergenic
CTAACAAGCTTGGTGAAGCT+TGG 0.471247 3.2:+82825335 MS.gene38571:CDS
CAGAAGAATCTTCAGAGAAT+GGG 0.472581 3.2:+82825373 MS.gene38571:CDS
CTGAATATTTGGAGAAATGT+GGG 0.476542 3.2:+82825663 MS.gene38571:CDS
GCGGCTGTGGGAAGCCAGTA+AGG 0.479826 3.2:+82825271 MS.gene38571:CDS
TGCGAAGAGAAGAAGTATAT+GGG 0.480978 3.2:-82822188 None:intergenic
GTATCACGGCGGTGAGAGAT+TGG 0.481133 3.2:-82822128 None:intergenic
GTTGTAAGACAGAACATTCA+AGG 0.484662 3.2:-82824982 None:intergenic
CTATGTTGAAAGACTGCCAT+TGG 0.497964 3.2:+82825609 MS.gene38571:CDS
CCACTTCTACGTGGCTATGT+AGG 0.500824 3.2:+82824795 MS.gene38571:CDS
ATACGCCTCTTTGAAGCAAA+AGG 0.504517 3.2:+82825238 MS.gene38571:CDS
ATATGTCAATTGGCAAAAGA+TGG 0.504962 3.2:+82825553 MS.gene38571:CDS
ACGTGGGAAATTCTCATTGA+AGG 0.506864 3.2:+82825530 MS.gene38571:CDS
TTCTTTGTGGCGGCCTCCAA+TGG 0.509216 3.2:-82825625 None:intergenic
GCCAATGTGTATATGAAAGC+AGG 0.509662 3.2:+82825125 MS.gene38571:CDS
ATGGCTAATACAATTCTTTG+TGG 0.512455 3.2:-82825638 None:intergenic
ATGCATATACCTGACTCAGC+TGG 0.514045 3.2:+82824753 MS.gene38571:CDS
CTTCAAAATTGGGTCGATCA+AGG 0.514502 3.2:+82822348 MS.gene38571:CDS
TTTCTCCAAATATTCAGCTA+TGG 0.517860 3.2:-82825657 None:intergenic
CCATTCTTAAAGGCTTCACT+GGG 0.526110 3.2:+82825855 MS.gene38571:CDS
GCGATATGGGGTTGCAGCAG+TGG 0.527736 3.2:+82825034 MS.gene38571:CDS
GCTGAATATTTGGAGAAATG+TGG 0.530476 3.2:+82825662 MS.gene38571:CDS
CACACAGGTATTCAACTGGA+TGG 0.535536 3.2:+82824632 MS.gene38571:intron
TGGATGAGTGCTTGTGATGA+GGG 0.538983 3.2:+82825008 MS.gene38571:CDS
ACGCTACAATCACGCATTCG+AGG 0.542785 3.2:+82822428 MS.gene38571:CDS
TACGTGGCTATGTAGGAGAT+AGG 0.544359 3.2:+82824802 MS.gene38571:CDS
CTCTCACCGCCGTGATACGA+CGG 0.545445 3.2:+82822133 MS.gene38571:CDS
CAATAAAGACAAAATGGAGA+TGG 0.549030 3.2:+82825817 MS.gene38571:CDS
AGGTAACAAGCTTTCATCAT+CGG 0.555005 3.2:+82822368 MS.gene38571:CDS
TGTTGAAAGACTGCCATTGG+AGG 0.555843 3.2:+82825612 MS.gene38571:CDS
TATTTGCATACTAACAAGCT+TGG 0.557592 3.2:+82825325 MS.gene38571:CDS
ATGAGAATGTTGAAATGGGA+TGG 0.563565 3.2:+82825084 MS.gene38571:CDS
CATCTCCACACATTGCAGAA+GGG 0.564169 3.2:+82825488 MS.gene38571:CDS
ATCTCCACACATTGCAGAAG+GGG 0.565120 3.2:+82825489 MS.gene38571:CDS
TCCTGCTTTCATATACACAT+TGG 0.565526 3.2:-82825126 None:intergenic
TTAGGAGCATATGTGCGGAA+TGG 0.567056 3.2:+82825440 MS.gene38571:CDS
ATGGAGAAGCTCTATGAACT+GGG 0.568445 3.2:+82824849 MS.gene38571:CDS
CTGTCTACATGTAATCGTCT+TGG 0.569357 3.2:+82825194 MS.gene38571:CDS
TGCCACATGTGAGTACCAAA+AGG 0.570010 3.2:+82824920 MS.gene38571:CDS
GCATCTCCACACATTGCAGA+AGG 0.570081 3.2:+82825487 MS.gene38571:CDS
CATGATCAGCTGGGTTTATG+CGG 0.572059 3.2:-82824671 None:intergenic
CGTGTCGTACCGTCGTATCA+CGG 0.574617 3.2:-82822142 None:intergenic
GAAGCCAGTAAGGCAGTTGG+TGG 0.575582 3.2:+82825281 MS.gene38571:CDS
GCTCTATGAACTGGGGCTAG+TGG 0.575872 3.2:+82824857 MS.gene38571:CDS
CGCCTCTTTGAAGCAAAAGG+AGG 0.583122 3.2:+82825241 MS.gene38571:CDS
TTGGATGAGTGCTTGTGATG+AGG 0.583463 3.2:+82825007 MS.gene38571:CDS
CCTACATAGCCACGTAGAAG+TGG 0.584375 3.2:-82824795 None:intergenic
ACTTCAGAGCATGATCAGCT+GGG 0.585003 3.2:-82824680 None:intergenic
AACTGAGATGCATCTCCAGA+AGG 0.596914 3.2:+82822391 MS.gene38571:CDS
ACGTGGCTATGTAGGAGATA+GGG 0.597576 3.2:+82824803 MS.gene38571:CDS
GGAGGGAGTCTTGCGGCTGT+GGG 0.599301 3.2:+82825259 MS.gene38571:CDS
TCTCCACACATTGCAGAAGG+GGG 0.602930 3.2:+82825490 MS.gene38571:CDS
CATCACAAGCACTCATCCAA+AGG 0.605501 3.2:-82825004 None:intergenic
TTTATTTGTTGGATAACTAG+GGG 0.607266 3.2:-82824945 None:intergenic
GCTAATACAATTCTTTGTGG+CGG 0.610024 3.2:-82825635 None:intergenic
GCCTCTTTGAAGCAAAAGGA+GGG 0.615558 3.2:+82825242 MS.gene38571:CDS
AACAAGCTTGGTGAAGCTTG+GGG 0.626479 3.2:+82825337 MS.gene38571:CDS
TGGGAAGCCAGTAAGGCAGT+TGG 0.629575 3.2:+82825278 MS.gene38571:CDS
TTGTAAGACAGAACATTCAA+GGG 0.631305 3.2:-82824981 None:intergenic
CTACATAGCCACGTAGAAGT+GGG 0.632992 3.2:-82824794 None:intergenic
GCTGTCCAAACTACAAGACG+TGG 0.639324 3.2:+82825513 MS.gene38571:CDS
CTCCACACATTGCAGAAGGG+GGG 0.656597 3.2:+82825491 MS.gene38571:CDS
CAATTGGCAAAAGATGGATG+AGG 0.660417 3.2:+82825559 MS.gene38571:CDS
ACGTAGAAGTGGGAGATAGG+CGG 0.666086 3.2:-82824784 None:intergenic
AAGGTGGTTCTTGAGCAGAA+AGG 0.666643 3.2:-82825775 None:intergenic
GCGAAGAGAAGAAGTATATG+GGG 0.666763 3.2:-82822187 None:intergenic
AGCAAAAGGAGGGAGTCTTG+CGG 0.669308 3.2:+82825252 MS.gene38571:CDS
GCCTATCTCCCACTTCTACG+TGG 0.702332 3.2:+82824786 MS.gene38571:CDS
TGGAGAAGCTCTATGAACTG+GGG 0.707353 3.2:+82824850 MS.gene38571:CDS
CTGTCCAAACTACAAGACGT+GGG 0.708205 3.2:+82825514 MS.gene38571:CDS
TGATGAGGGAGAGCGATATG+GGG 0.743042 3.2:+82825022 MS.gene38571:CDS
GTCGTACCGTCGTATCACGG+CGG 0.782153 3.2:-82822139 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACTAAAGTAAAAAGATA+AGG + chr3.2:82823445-82823464 MS.gene38571:intron 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr3.2:82823446-82823465 None:intergenic 15.0%
!! AATGATCAATAAAGACAAAA+TGG + chr3.2:82825811-82825830 MS.gene38571:CDS 20.0%
!! AGTTTCATCATTTCATTATA+AGG - chr3.2:82824894-82824913 None:intergenic 20.0%
!! ATCACAGATATTCATAATTT+AGG + chr3.2:82825710-82825729 MS.gene38571:CDS 20.0%
!! GTTTCATCATTTCATTATAA+GGG - chr3.2:82824893-82824912 None:intergenic 20.0%
!!! CTTTATTTCGTTTTATTTGT+TGG - chr3.2:82824959-82824978 None:intergenic 20.0%
!!! TGATGATGTACTTTTTATTT+TGG + chr3.2:82824318-82824337 MS.gene38571:intron 20.0%
!!! TGTCTTTATTGATCATTTTA+AGG - chr3.2:82825808-82825827 None:intergenic 20.0%
!!! TTTTATTTGTTGGATAACTA+GGG - chr3.2:82824949-82824968 None:intergenic 20.0%
! AAATGATGAGAATGTTGAAA+TGG + chr3.2:82825079-82825098 MS.gene38571:CDS 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr3.2:82822702-82822721 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr3.2:82823452-82823471 MS.gene38571:intron 25.0%
! AATGATGAGAATGTTGAAAT+GGG + chr3.2:82825080-82825099 MS.gene38571:CDS 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr3.2:82823890-82823909 None:intergenic 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr3.2:82823453-82823472 MS.gene38571:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr3.2:82823889-82823908 None:intergenic 25.0%
! GAAACTATAACTATTATCGT+CGG - chr3.2:82824098-82824117 None:intergenic 25.0%
! GACGATAATAGTTATAGTTT+CGG + chr3.2:82824097-82824116 MS.gene38571:intron 25.0%
! GATATTCATAATTTAGGTCT+TGG + chr3.2:82825716-82825735 MS.gene38571:CDS 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr3.2:82823891-82823910 MS.gene38571:intron 25.0%
! TGTTAGTATGCAAATATAGT+TGG - chr3.2:82825321-82825340 None:intergenic 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + chr3.2:82822719-82822738 MS.gene38571:intron 25.0%
!! TTAATTATTCTTTTGCACAC+AGG + chr3.2:82824617-82824636 MS.gene38571:intron 25.0%
!! TTTATTTGTTGGATAACTAG+GGG - chr3.2:82824948-82824967 None:intergenic 25.0%
!!! AGTTCTAAAGTAGTTAATTG+TGG + chr3.2:82822502-82822521 MS.gene38571:intron 25.0%
!!! ATTTAGTTTGTTGCTTATGT+TGG + chr3.2:82824248-82824267 MS.gene38571:intron 25.0%
!!! GTTTTATTTGTTGGATAACT+AGG - chr3.2:82824950-82824969 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3.2:82822844-82822863 None:intergenic 25.0%
!!! TATTGATCATTTTAAGGACA+TGG - chr3.2:82825802-82825821 None:intergenic 25.0%
!!! TGATGTACTTTTTATTTTGG+AGG + chr3.2:82824321-82824340 MS.gene38571:intron 25.0%
!!! TGTTTAGCTTATGCTTTTAT+AGG + chr3.2:82824276-82824295 MS.gene38571:intron 25.0%
AAGATACTGTAACTGATCAT+CGG + chr3.2:82824504-82824523 MS.gene38571:intron 30.0%
AAGCTGTAATCAATCCATAA+TGG - chr3.2:82824479-82824498 None:intergenic 30.0%
ACAGAAATTCAACAGAGAAA+TGG - chr3.2:82824183-82824202 None:intergenic 30.0%
AGTTAATCGCTAAAAACTGT+GGG + chr3.2:82824706-82824725 MS.gene38571:CDS 30.0%
ATATGTCAATTGGCAAAAGA+TGG + chr3.2:82825553-82825572 MS.gene38571:CDS 30.0%
ATGATCATGTTATTGCAATG+TGG + chr3.2:82824542-82824561 MS.gene38571:intron 30.0%
ATGGCTAATACAATTCTTTG+TGG - chr3.2:82825641-82825660 None:intergenic 30.0%
ATTAGCCATAGCTGAATATT+TGG + chr3.2:82825652-82825671 MS.gene38571:CDS 30.0%
ATTTCCAAAAAACCTTCAAG+CGG - chr3.2:82824218-82824237 None:intergenic 30.0%
CAATAAAGACAAAATGGAGA+TGG + chr3.2:82825817-82825836 MS.gene38571:CDS 30.0%
CTGAATATTTGGAGAAATGT+GGG + chr3.2:82825663-82825682 MS.gene38571:CDS 30.0%
GCTATAGTGAAGTGATTATA+AGG - chr3.2:82824425-82824444 None:intergenic 30.0%
GTTATTGCAATGTGGTTTAT+GGG + chr3.2:82824550-82824569 MS.gene38571:intron 30.0%
GTTCTATCAAAGACCATATT+TGG + chr3.2:82822662-82822681 MS.gene38571:intron 30.0%
TAGAAACAAGACGGAATATA+TGG - chr3.2:82823275-82823294 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr3.2:82823495-82823514 MS.gene38571:intron 30.0%
TATTTGCATACTAACAAGCT+TGG + chr3.2:82825325-82825344 MS.gene38571:CDS 30.0%
TCATTGAAGGATATGTCAAT+TGG + chr3.2:82825543-82825562 MS.gene38571:CDS 30.0%
TCTTTGATAGAACATTATGG+CGG - chr3.2:82822655-82822674 None:intergenic 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr3.2:82823255-82823274 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr3.2:82822658-82822677 None:intergenic 30.0%
TGTTATTGCAATGTGGTTTA+TGG + chr3.2:82824549-82824568 MS.gene38571:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr3.2:82823180-82823199 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr3.2:82823888-82823907 None:intergenic 30.0%
TTGTAAGACAGAACATTCAA+GGG - chr3.2:82824984-82825003 None:intergenic 30.0%
TTTCTCCAAATATTCAGCTA+TGG - chr3.2:82825660-82825679 None:intergenic 30.0%
! AACTTTTCAACGAGATTATG+AGG - chr3.2:82823951-82823970 None:intergenic 30.0%
! AGAGTCTCTAATGTTCTTTT+AGG + chr3.2:82825422-82825441 MS.gene38571:CDS 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr3.2:82822697-82822716 MS.gene38571:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3.2:82822848-82822867 MS.gene38571:intron 30.0%
!! ATCATTTTAAGGACATGGAA+AGG - chr3.2:82825797-82825816 None:intergenic 30.0%
!! ATTACTAGCTTTAGCCATAT+AGG + chr3.2:82822528-82822547 MS.gene38571:intron 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr3.2:82823659-82823678 None:intergenic 30.0%
!! TTACTAGCTTTAGCCATATA+GGG + chr3.2:82822529-82822548 MS.gene38571:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr3.2:82823653-82823672 None:intergenic 30.0%
!!! GGCATTTTTTAGAACTAGAA+TGG - chr3.2:82825165-82825184 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr3.2:82823434-82823453 None:intergenic 30.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr3.2:82823247-82823266 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3.2:82823046-82823065 MS.gene38571:intron 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr3.2:82823779-82823798 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3.2:82822774-82822793 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr3.2:82823860-82823879 None:intergenic 35.0%
ACATGTAGACAGTTTCTCTT+CGG - chr3.2:82825186-82825205 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr3.2:82823246-82823265 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr3.2:82822907-82822926 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3.2:82822690-82822709 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3.2:82822855-82822874 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3.2:82823042-82823061 None:intergenic 35.0%
AGGTAACAAGCTTTCATCAT+CGG + chr3.2:82822368-82822387 MS.gene38571:CDS 35.0%
ATACCATGAAGTTATGGGAA+AGG - chr3.2:82823819-82823838 None:intergenic 35.0%
ATATCTAAACCGTGTAACTC+GGG + chr3.2:82823183-82823202 MS.gene38571:intron 35.0%
ATGAGAATGTTGAAATGGGA+TGG + chr3.2:82825084-82825103 MS.gene38571:CDS 35.0%
ATGTTCTGTCTTACAACCTT+TGG + chr3.2:82824988-82825007 MS.gene38571:CDS 35.0%
ATTGCCAGTGCTTCAAAATT+GGG + chr3.2:82822338-82822357 MS.gene38571:CDS 35.0%
CAGAAGAATCTTCAGAGAAT+GGG + chr3.2:82825373-82825392 MS.gene38571:CDS 35.0%
CATAAACCCTAAACCCTATA+TGG - chr3.2:82822545-82822564 None:intergenic 35.0%
CTTTAGCCATATAGGGTTTA+GGG + chr3.2:82822536-82822555 MS.gene38571:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3.2:82822830-82822849 None:intergenic 35.0%
GAGACTGTTTCCATTCTTAA+AGG + chr3.2:82825845-82825864 MS.gene38571:CDS 35.0%
GAGTCATACCATGAAGTTAT+GGG - chr3.2:82823824-82823843 None:intergenic 35.0%
GAGTTAATCGCTAAAAACTG+TGG + chr3.2:82824705-82824724 MS.gene38571:CDS 35.0%
GATATCTAAACCGTGTAACT+CGG + chr3.2:82823182-82823201 MS.gene38571:intron 35.0%
GCTAATACAATTCTTTGTGG+CGG - chr3.2:82825638-82825657 None:intergenic 35.0%
GCTCAATACACTGAACTTAA+AGG - chr3.2:82824374-82824393 None:intergenic 35.0%
GCTGAATATTTGGAGAAATG+TGG + chr3.2:82825662-82825681 MS.gene38571:CDS 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr3.2:82822777-82822796 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG - chr3.2:82823181-82823200 None:intergenic 35.0%
GTTGTAAGACAGAACATTCA+AGG - chr3.2:82824985-82825004 None:intergenic 35.0%
TAACTATTATCGTCGGATTC+AGG - chr3.2:82824091-82824110 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr3.2:82823861-82823880 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3.2:82823120-82823139 None:intergenic 35.0%
TACCATGAAGTTATGGGAAA+GGG - chr3.2:82823818-82823837 None:intergenic 35.0%
TATTGCCATGAAAAGAGCTT+TGG + chr3.2:82825586-82825605 MS.gene38571:CDS 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr3.2:82823887-82823906 None:intergenic 35.0%
TCCTGCTTTCATATACACAT+TGG - chr3.2:82825129-82825148 None:intergenic 35.0%
TGAGTCATACCATGAAGTTA+TGG - chr3.2:82823825-82823844 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3.2:82822835-82822854 None:intergenic 35.0%
TTACATTCCTGCAATTTGTG+TGG + chr3.2:82822474-82822493 MS.gene38571:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr3.2:82822778-82822797 MS.gene38571:intron 35.0%
TTTCCAAAAAACCTTCAAGC+GGG - chr3.2:82824217-82824236 None:intergenic 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr3.2:82823055-82823074 None:intergenic 35.0%
! AGCAGCATCAGTTTCTTTTT+GGG + chr3.2:82822210-82822229 MS.gene38571:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3.2:82822678-82822697 None:intergenic 35.0%
! CACTTCACTATAGCATTTTG+TGG + chr3.2:82824431-82824450 MS.gene38571:intron 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr3.2:82823496-82823515 None:intergenic 35.0%
! GGTTTATGCGGAATTTTTGT+TGG - chr3.2:82824662-82824681 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr3.2:82823388-82823407 MS.gene38571:intron 35.0%
! TGCGAAGAGAAGAAGTATAT+GGG - chr3.2:82822191-82822210 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr3.2:82823564-82823583 MS.gene38571:intron 35.0%
!! ATTTTAAGGACATGGAAAGG+TGG - chr3.2:82825794-82825813 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3.2:82823153-82823172 MS.gene38571:intron 35.0%
!! TTCTTTTAGGAGCATATGTG+CGG + chr3.2:82825435-82825454 MS.gene38571:CDS 35.0%
!! TTTTGTGGATTAATCGCTTC+AGG + chr3.2:82824446-82824465 MS.gene38571:intron 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr3.2:82823754-82823773 None:intergenic 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr3.2:82823753-82823772 None:intergenic 35.0%
!!! CAGAGAAATGGTTTTAACGA+AGG - chr3.2:82824171-82824190 None:intergenic 35.0%
AAAAACCTTCAAGCGGGAAA+AGG - chr3.2:82824211-82824230 None:intergenic 40.0%
ACAACATACCTATCGAAGTG+TGG - chr3.2:82824011-82824030 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr3.2:82822880-82822899 None:intergenic 40.0%
ACGTGGGAAATTCTCATTGA+AGG + chr3.2:82825530-82825549 MS.gene38571:CDS 40.0%
ACTTCGATAGGTATGTTGTC+CGG + chr3.2:82824012-82824031 MS.gene38571:intron 40.0%
AGATCTTACCAGACTCTAAC+AGG - chr3.2:82824143-82824162 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr3.2:82823557-82823576 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr3.2:82822749-82822768 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr3.2:82823484-82823503 None:intergenic 40.0%
ATATCATACCCCGAGTTACA+CGG - chr3.2:82823195-82823214 None:intergenic 40.0%
ATCGAAGTGTGGAAAAGTCT+CGG - chr3.2:82824000-82824019 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr3.2:82823216-82823235 MS.gene38571:intron 40.0%
ATGGAGAAGCTCTATGAACT+GGG + chr3.2:82824849-82824868 MS.gene38571:CDS 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + chr3.2:82824132-82824151 MS.gene38571:intron 40.0%
ATTTCCCACGTCTTGTAGTT+TGG - chr3.2:82825521-82825540 None:intergenic 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr3.2:82823859-82823878 None:intergenic 40.0%
CAATTGGCAAAAGATGGATG+AGG + chr3.2:82825559-82825578 MS.gene38571:CDS 40.0%
CACGTTACGGATAACCAATT+TGG - chr3.2:82823766-82823785 None:intergenic 40.0%
CATTGCCAGTGCTTCAAAAT+TGG + chr3.2:82822337-82822356 MS.gene38571:CDS 40.0%
CCAGAAGAATCTTCAGAGAA+TGG + chr3.2:82825372-82825391 MS.gene38571:CDS 40.0%
CCATTCTTAAAGGCTTCACT+GGG + chr3.2:82825855-82825874 MS.gene38571:CDS 40.0%
CTATCCAGGATATGTATGAG+GGG - chr3.2:82823555-82823574 None:intergenic 40.0%
CTATGTTGAAAGACTGCCAT+TGG + chr3.2:82825609-82825628 MS.gene38571:CDS 40.0%
CTGTCTACATGTAATCGTCT+TGG + chr3.2:82825194-82825213 MS.gene38571:CDS 40.0%
CTTCAAAATTGGGTCGATCA+AGG + chr3.2:82822348-82822367 MS.gene38571:CDS 40.0%
GAAAAGGATGAGTAATGGCA+AGG - chr3.2:82824046-82824065 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr3.2:82822881-82822900 None:intergenic 40.0%
GCCAATGTGTATATGAAAGC+AGG + chr3.2:82825125-82825144 MS.gene38571:CDS 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - chr3.2:82824051-82824070 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG - chr3.2:82823556-82823575 None:intergenic 40.0%
GCTTTAGCCATATAGGGTTT+AGG + chr3.2:82822535-82822554 MS.gene38571:intron 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr3.2:82823613-82823632 MS.gene38571:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr3.2:82823160-82823179 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3.2:82823121-82823140 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr3.2:82822913-82822932 None:intergenic 40.0%
TAACAATAGGACTGCACCAA+GGG - chr3.2:82823483-82823502 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG - chr3.2:82824127-82824146 None:intergenic 40.0%
TACCCTTTCCCATAACTTCA+TGG + chr3.2:82823813-82823832 MS.gene38571:intron 40.0%
TATCCAGGATATGTATGAGG+GGG - chr3.2:82823554-82823573 None:intergenic 40.0%
TATCTAAACCGTGTAACTCG+GGG + chr3.2:82823184-82823203 MS.gene38571:intron 40.0%
TATGAGGACGAAGAAAATGC+CGG - chr3.2:82823935-82823954 None:intergenic 40.0%
TCCATTCTTAAAGGCTTCAC+TGG + chr3.2:82825854-82825873 MS.gene38571:CDS 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr3.2:82823749-82823768 MS.gene38571:intron 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr3.2:82823883-82823902 MS.gene38571:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr3.2:82823223-82823242 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr3.2:82822882-82822901 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr3.2:82823569-82823588 None:intergenic 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr3.2:82823484-82823503 MS.gene38571:intron 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr3.2:82823483-82823502 MS.gene38571:intron 40.0%
TTTGCACACAGGTATTCAAC+TGG + chr3.2:82824628-82824647 MS.gene38571:intron 40.0%
TTTGGATTTGATGAGCCTTC+TGG - chr3.2:82822409-82822428 None:intergenic 40.0%
! AGACTTTTCCACACTTCGAT+AGG + chr3.2:82824000-82824019 MS.gene38571:intron 40.0%
! ATTTTCCTTTTCCCGCTTGA+AGG + chr3.2:82824203-82824222 MS.gene38571:intron 40.0%
! CAGCAGCATCAGTTTCTTTT+TGG + chr3.2:82822209-82822228 MS.gene38571:CDS 40.0%
! CATAGCCAAAGCTCTTTTCA+TGG - chr3.2:82825594-82825613 None:intergenic 40.0%
! CCATTCTCTGAAGATTCTTC+TGG - chr3.2:82825375-82825394 None:intergenic 40.0%
! CTGCGAAGAGAAGAAGTATA+TGG - chr3.2:82822192-82822211 None:intergenic 40.0%
! CTTCAGGCTACTTTCCATTA+TGG + chr3.2:82824462-82824481 MS.gene38571:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr3.2:82823621-82823640 None:intergenic 40.0%
! GCGAAGAGAAGAAGTATATG+GGG - chr3.2:82822190-82822209 None:intergenic 40.0%
! TAACAAGCTTGGTGAAGCTT+GGG + chr3.2:82825336-82825355 MS.gene38571:CDS 40.0%
! TACCTTTTGGTACTCACATG+TGG - chr3.2:82824925-82824944 None:intergenic 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - chr3.2:82824062-82824081 None:intergenic 40.0%
!! ATACGCCTCTTTGAAGCAAA+AGG + chr3.2:82825238-82825257 MS.gene38571:CDS 40.0%
!! ATTCCGTCTTGTTTCTACTC+AGG + chr3.2:82823278-82823297 MS.gene38571:intron 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr3.2:82823750-82823769 None:intergenic 40.0%
!!! CAATTTTGAAGCACTGGCAA+TGG - chr3.2:82822339-82822358 None:intergenic 40.0%
!!! TTTCCCGCTTGAAGGTTTTT+TGG + chr3.2:82824211-82824230 MS.gene38571:intron 40.0%
AACGCCTTATCCACTAAGTG+GGG + chr3.2:82822609-82822628 MS.gene38571:intron 45.0%
AACTGAGATGCATCTCCAGA+AGG + chr3.2:82822391-82822410 MS.gene38571:CDS 45.0%
AACTTCAGAGCATGATCAGC+TGG - chr3.2:82824684-82824703 None:intergenic 45.0%
AAGGTGGTTCTTGAGCAGAA+AGG - chr3.2:82825778-82825797 None:intergenic 45.0%
ACAACGCCTTATCCACTAAG+TGG + chr3.2:82822607-82822626 MS.gene38571:intron 45.0%
ACAATCACGCATTCGAGGTT+CGG + chr3.2:82822433-82822452 MS.gene38571:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3.2:82823008-82823027 None:intergenic 45.0%
ACGTGGCTATGTAGGAGATA+GGG + chr3.2:82824803-82824822 MS.gene38571:CDS 45.0%
ACTTCAGAGCATGATCAGCT+GGG - chr3.2:82824683-82824702 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr3.2:82822765-82822784 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3.2:82823117-82823136 None:intergenic 45.0%
ATCTCCACACATTGCAGAAG+GGG + chr3.2:82825489-82825508 MS.gene38571:CDS 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - chr3.2:82824039-82824058 None:intergenic 45.0%
ATGCATATACCTGACTCAGC+TGG + chr3.2:82824753-82824772 MS.gene38571:CDS 45.0%
CAACGCCTTATCCACTAAGT+GGG + chr3.2:82822608-82822627 MS.gene38571:intron 45.0%
CACACAGGTATTCAACTGGA+TGG + chr3.2:82824632-82824651 MS.gene38571:intron 45.0%
CAGTAAAGCTGAGACGTTCA+TGG + chr3.2:82824830-82824849 MS.gene38571:CDS 45.0%
CATCACAAGCACTCATCCAA+AGG - chr3.2:82825007-82825026 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr3.2:82822879-82822898 None:intergenic 45.0%
CATCTCCACACATTGCAGAA+GGG + chr3.2:82825488-82825507 MS.gene38571:CDS 45.0%
CATGAACGTCTCAGCTTTAC+TGG - chr3.2:82824832-82824851 None:intergenic 45.0%
CATGATCAGCTGGGTTTATG+CGG - chr3.2:82824674-82824693 None:intergenic 45.0%
CATGGAGAAGCTCTATGAAC+TGG + chr3.2:82824848-82824867 MS.gene38571:CDS 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3.2:82822960-82822979 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3.2:82822963-82822982 MS.gene38571:intron 45.0%
CTACATAGCCACGTAGAAGT+GGG - chr3.2:82824797-82824816 None:intergenic 45.0%
CTGTCCAAACTACAAGACGT+GGG + chr3.2:82825514-82825533 MS.gene38571:CDS 45.0%
CTTATCGCACAAAACACCTG+AGG + chr3.2:82823075-82823094 MS.gene38571:intron 45.0%
CTTCGAACCACACAAATTGC+AGG - chr3.2:82822484-82822503 None:intergenic 45.0%
GAATGCGTGATTGTAGCGTT+TGG - chr3.2:82822427-82822446 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr3.2:82822755-82822774 None:intergenic 45.0%
TACGTGGCTATGTAGGAGAT+AGG + chr3.2:82824802-82824821 MS.gene38571:CDS 45.0%
TCCGTACCATACAACATTGC+CGG + chr3.2:82823004-82823023 MS.gene38571:intron 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - chr3.2:82824038-82824057 None:intergenic 45.0%
TGCCACATGTGAGTACCAAA+AGG + chr3.2:82824920-82824939 MS.gene38571:CDS 45.0%
TGGAGAAGCTCTATGAACTG+GGG + chr3.2:82824850-82824869 MS.gene38571:CDS 45.0%
TGGATGAGTGCTTGTGATGA+GGG + chr3.2:82825008-82825027 MS.gene38571:CDS 45.0%
TGTTGAAAGACTGCCATTGG+AGG + chr3.2:82825612-82825631 MS.gene38571:CDS 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3.2:82823000-82823019 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3.2:82823108-82823127 None:intergenic 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3.2:82823094-82823113 None:intergenic 45.0%
TTGGATGAGTGCTTGTGATG+AGG + chr3.2:82825007-82825026 MS.gene38571:CDS 45.0%
! AACAAGCTTGGTGAAGCTTG+GGG + chr3.2:82825337-82825356 MS.gene38571:CDS 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr3.2:82823611-82823630 None:intergenic 45.0%
! CCCAGTGAAGCCTTTAAGAA+TGG - chr3.2:82825858-82825877 None:intergenic 45.0%
! CGCTAAAAACTGTGGGCTAA+TGG + chr3.2:82824713-82824732 MS.gene38571:CDS 45.0%
! CTAACAAGCTTGGTGAAGCT+TGG + chr3.2:82825335-82825354 MS.gene38571:CDS 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr3.2:82823373-82823392 None:intergenic 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3.2:82822999-82823018 None:intergenic 45.0%
! TCCCTCCTTTTGCTTCAAAG+AGG - chr3.2:82825246-82825265 None:intergenic 45.0%
! TTAGGAGCATATGTGCGGAA+TGG + chr3.2:82825440-82825459 MS.gene38571:CDS 45.0%
!! AGCTGATCATGCTCTGAAGT+TGG + chr3.2:82824683-82824702 MS.gene38571:CDS 45.0%
!! GCCTCTTTGAAGCAAAAGGA+GGG + chr3.2:82825242-82825261 MS.gene38571:CDS 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr3.2:82823401-82823420 MS.gene38571:intron 45.0%
!!! GGATAACTAGGGGTACCTTT+TGG - chr3.2:82824938-82824957 None:intergenic 45.0%
!!! TCGACCCAATTTTGAAGCAC+TGG - chr3.2:82822345-82822364 None:intergenic 45.0%
AAGCCCCCTCATACATATCC+TGG + chr3.2:82823548-82823567 MS.gene38571:intron 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr3.2:82823464-82823483 MS.gene38571:intron 50.0%
ACGCTACAATCACGCATTCG+AGG + chr3.2:82822428-82822447 MS.gene38571:CDS 50.0%
ACGTAGAAGTGGGAGATAGG+CGG - chr3.2:82824787-82824806 None:intergenic 50.0%
AGCAAAAGGAGGGAGTCTTG+CGG + chr3.2:82825252-82825271 MS.gene38571:CDS 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr3.2:82822932-82822951 None:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - chr3.2:82823348-82823367 None:intergenic 50.0%
AGTCTCGGCGATAGAGGAAT+TGG - chr3.2:82823985-82824004 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG - chr3.2:82824124-82824143 None:intergenic 50.0%
CCACTTCTACGTGGCTATGT+AGG + chr3.2:82824795-82824814 MS.gene38571:CDS 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr3.2:82823284-82823303 None:intergenic 50.0%
CCTACATAGCCACGTAGAAG+TGG - chr3.2:82824798-82824817 None:intergenic 50.0%
CCTTATCCACTAAGTGGGGT+CGG + chr3.2:82822613-82822632 MS.gene38571:intron 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr3.2:82823710-82823729 None:intergenic 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr3.2:82823599-82823618 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr3.2:82823233-82823252 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - chr3.2:82823349-82823368 None:intergenic 50.0%
GCATCTCCACACATTGCAGA+AGG + chr3.2:82825487-82825506 MS.gene38571:CDS 50.0%
GCTGTCCAAACTACAAGACG+TGG + chr3.2:82825513-82825532 MS.gene38571:CDS 50.0%
GCTTTCTTTCCAGCTGAGTC+AGG - chr3.2:82824765-82824784 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr3.2:82823600-82823619 None:intergenic 50.0%
GGCAATGGAGTTTGCGTTGA+AGG - chr3.2:82822324-82822343 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3.2:82823013-82823032 None:intergenic 50.0%
GTCTCGGCGATAGAGGAATT+GGG - chr3.2:82823984-82824003 None:intergenic 50.0%
GTGATGAGGGAGAGCGATAT+GGG + chr3.2:82825021-82825040 MS.gene38571:CDS 50.0%
TAAACGGGAGGCTAGAGACT+TGG - chr3.2:82823333-82823352 None:intergenic 50.0%
TCTCCACACATTGCAGAAGG+GGG + chr3.2:82825490-82825509 MS.gene38571:CDS 50.0%
TCTTCCACCAACTGCCTTAC+TGG - chr3.2:82825288-82825307 None:intergenic 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr3.2:82822787-82822806 MS.gene38571:intron 50.0%
TGATGAGGGAGAGCGATATG+GGG + chr3.2:82825022-82825041 MS.gene38571:CDS 50.0%
TGGAAAAGTCTCGGCGATAG+AGG - chr3.2:82823991-82824010 None:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr3.2:82823601-82823620 None:intergenic 50.0%
TGTGATGAGGGAGAGCGATA+TGG + chr3.2:82825020-82825039 MS.gene38571:CDS 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr3.2:82822952-82822971 None:intergenic 50.0%
! AGGCAAGCCTTAGAAGCGTA+CGG - chr3.2:82823310-82823329 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr3.2:82823362-82823381 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr3.2:82823363-82823382 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr3.2:82823281-82823300 MS.gene38571:intron 50.0%
!! CGCCTCTTTGAAGCAAAAGG+AGG + chr3.2:82825241-82825260 MS.gene38571:CDS 50.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3.2:82822621-82822640 MS.gene38571:intron 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr3.2:82823526-82823545 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3.2:82822622-82822641 None:intergenic 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr3.2:82823591-82823610 MS.gene38571:intron 55.0%
CGAAGAAAATGCCGGACGAG+TGG - chr3.2:82823927-82823946 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr3.2:82822940-82822959 None:intergenic 55.0%
CGTGTCGTACCGTCGTATCA+CGG - chr3.2:82822145-82822164 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr3.2:82823525-82823544 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3.2:82823026-82823045 None:intergenic 55.0%
CTCCACACATTGCAGAAGGG+GGG + chr3.2:82825491-82825510 MS.gene38571:CDS 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr3.2:82822788-82822807 MS.gene38571:intron 55.0%
GAAGCCAGTAAGGCAGTTGG+TGG + chr3.2:82825281-82825300 MS.gene38571:CDS 55.0%
GCCACGTAGAAGTGGGAGAT+AGG - chr3.2:82824790-82824809 None:intergenic 55.0%
GCCTATCTCCCACTTCTACG+TGG + chr3.2:82824786-82824805 MS.gene38571:CDS 55.0%
GCGGAAACCGTACGCTTCTA+AGG + chr3.2:82823300-82823319 MS.gene38571:intron 55.0%
GCTCTATGAACTGGGGCTAG+TGG + chr3.2:82824857-82824876 MS.gene38571:CDS 55.0%
GTATCACGGCGGTGAGAGAT+TGG - chr3.2:82822131-82822150 None:intergenic 55.0%
GTGCTTCTTCTCCACTCGTC+CGG + chr3.2:82823913-82823932 MS.gene38571:intron 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - chr3.2:82824034-82824053 None:intergenic 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr3.2:82823524-82823543 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr3.2:82823740-82823759 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr3.2:82823590-82823609 MS.gene38571:intron 55.0%
TCGGCGATAGAGGAATTGGG+TGG - chr3.2:82823981-82824000 None:intergenic 55.0%
TGGGAAGCCAGTAAGGCAGT+TGG + chr3.2:82825278-82825297 MS.gene38571:CDS 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr3.2:82823530-82823549 None:intergenic 55.0%
TTCTTTGTGGCGGCCTCCAA+TGG - chr3.2:82825628-82825647 None:intergenic 55.0%
! CCGACCCCACTTAGTGGATA+AGG - chr3.2:82822616-82822635 None:intergenic 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr3.2:82823695-82823714 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr3.2:82823699-82823718 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr3.2:82822996-82823015 None:intergenic 55.0%
ACGGGAGGCTAGAGACTTGG+AGG - chr3.2:82823330-82823349 None:intergenic 60.0%
AGCCCCCCTTCTGCAATGTG+TGG - chr3.2:82825496-82825515 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr3.2:82823517-82823536 None:intergenic 60.0%
AGGGGGCTTCGACTAGTGTG+AGG - chr3.2:82823537-82823556 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr3.2:82823594-82823613 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - chr3.2:82823345-82823364 None:intergenic 60.0%
CTCTCACCGCCGTGATACGA+CGG + chr3.2:82822133-82822152 MS.gene38571:CDS 60.0%
GCGATATGGGGTTGCAGCAG+TGG + chr3.2:82825034-82825053 MS.gene38571:CDS 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr3.2:82823733-82823752 MS.gene38571:intron 60.0%
GTCGTACCGTCGTATCACGG+CGG - chr3.2:82822142-82822161 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr3.2:82823359-82823378 None:intergenic 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - chr3.2:82824082-82824101 None:intergenic 60.0%
AGGAGGGAGTCTTGCGGCTG+TGG + chr3.2:82825258-82825277 MS.gene38571:CDS 65.0%
GAGAAGACCCGTAGACGCCG+TGG - chr3.2:82822798-82822817 None:intergenic 65.0%
GCGGCTGTGGGAAGCCAGTA+AGG + chr3.2:82825271-82825290 MS.gene38571:CDS 65.0%
GGAGGGAGTCTTGCGGCTGT+GGG + chr3.2:82825259-82825278 MS.gene38571:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 82822120 82825880 82822120 ID=MS.gene38571
chr3.2 mRNA 82822120 82825880 82822120 ID=MS.gene38571.t1;Parent=MS.gene38571
chr3.2 exon 82822120 82822449 82822120 ID=MS.gene38571.t1.exon1;Parent=MS.gene38571.t1
chr3.2 CDS 82822120 82822449 82822120 ID=cds.MS.gene38571.t1;Parent=MS.gene38571.t1
chr3.2 exon 82824639 82825880 82824639 ID=MS.gene38571.t1.exon2;Parent=MS.gene38571.t1
chr3.2 CDS 82824639 82825880 82824639 ID=cds.MS.gene38571.t1;Parent=MS.gene38571.t1
Gene Sequence

>MS.gene38571

ATGGCGAACCAATCTCTCACCGCCGTGATACGACGGTACGACACGCTGAATCTTTCTCTTACTAATTCCCCATATACTTCTTCTCTTCGCAGCAGCATCAGTTTCTTTTTGGGCGCACGAACTCTCTACGCACACGCAGATTCTCGCACTTCTACATTTTCAGATAAACAGAATCTGAAGAGCTTAATTGCGCGATTCAAACCTTCAACGCAAACTCCATTGCCAGTGCTTCAAAATTGGGTCGATCAAGGTAACAAGCTTTCATCATCGGAACTGAGATGCATCTCCAGAAGGCTCATCAAATCCAAACGCTACAATCACGCATTCGAGGTTCGGTTTTTATTTACATGTTTATTACATTCCTGCAATTTGTGTGGTTCGAAGTTCTAAAGTAGTTAATTGTGGTTAATTACTAGCTTTAGCCATATAGGGTTTAGGGTTTATGCTATTCAAAATCAATAAATCTACAACAACAACAACAACAACAACAACGCCTTATCCACTAAGTGGGGTCGGCTACATGGATCAAATGCCGCCATAATGTTCTATCAAAGACCATATTTGGATCCAACTCATTGACCTCTAAATCTTTTCTAATGGTTTCTCTAATAGTTTTCTTAGGTCTTCCTCTACCTCTTTTAACCTGACTCTCCTCCATTTGATCTACTCTTCTTACCACGGCGTCTACGGGTCTTCTCTCTACATGTCCAAACCATCTAAGCCTATTTTCTACCAACTTTTCTACTATAGGTGCTACCCCCACTCTCTCTCTAATGATGTCATTCCTAATCCTATCATGTCTAGTCTTACCACTCATCCAACGCAACATCCTCATCTCCGCTACGCTTACTTTACTCTCGTGTTGGCTCTTAACCGCCCAACACTCCGTACCATACAACATTGCCGGTCTGACTGCTGTCCGATAGAACTTTCCTTTCAGCTTAAGTGGTACTTTCTTATCGCACAAAACACCTGAGGCTCTTCTCCATTTCAACCACCCAGCTTGAATACGATGATGTACATCAGCTTCTATTTCTCCGTCATTTTGTACTATGGACCCAAGATATCTAAACCGTGTAACTCGGGGTATGATATGATCTCCAACTTTCACCTCTAAGGTAGACCCACTTCTCCTTTTACTGAAGTTACATTCCATATATTCCGTCTTGTTTCTACTCAGGCGGAAACCGTACGCTTCTAAGGCTTGCCTCCAAGTCTCTAGCCTCCCGTTTAACTCCTCCCTCGACTCACCAAGCAAGACTACATCATCTGCAAAAAGCATACATCTCGGTGCTAACTCTTGGATGTGTTCCGTCAGTACATCCAAAACTAAAGTAAAAAGATAAGGACTTAGGGTTGACCCTTGGTGCAGTCCTATTGTTATGGGAAAATCTCCGGTATCCCCATCCTGCGTCCTCACACTAGTCGAAGCCCCCTCATACATATCCTGGATAGCTCTAATATAGGCAATCCTCACCCCTTTCTTCTCCAGGGCTTTCCACAAAATCTCTCTAGGTACTCTATCATACGCCTTCTCCAAATCAATGAAAACTAAGTGCAAGTCTTTTTTATCCGTCCGATATCGCTCCATCACGCGTCGAAGTAAGTAGATCGCTTCCATAGTCGACCTCCCAGGCATAAAACCAAATTGGTTATCCGTAACGTGAGTCTCTTTTCTTAGTCTTCGCTCAATTACCCTTTCCCATAACTTCATGGTATGACTCATTAGCTTAATTCCCCTATAATTCGCGCAATCTTGTATATCCCCCTTGTTCTTATAGATTGGAATTAAGGTGCTTCTTCTCCACTCGTCCGGCATTTTCTTCGTCCTCATAATCTCGTTGAAAAGTTTTGTGAGCCACCCAATTCCTCTATCGCCGAGACTTTTCCACACTTCGATAGGTATGTTGTCCGGCCCAACTGCCTTGCCATTACTCATCCTTTTCAACGCTTCTTTCACCTCGTGCTCCTGAATCCGACGATAATAGTTATAGTTTCGGTCCTCCTCTCTGATGTCTAACCTGTTAGAGTCTGGTAAGATCTCATATCCTTCGTTAAAACCATTTCTCTGTTGAATTTCTGTATTTTCCTTTTCCCGCTTGAAGGTTTTTTGGAAATGATTTATTTGATTTAGTTTGTTGCTTATGTTGGTTGAATGTTTAGCTTATGCTTTTATAGGCTTAAACTTATTTAGAATTTGATGATGTACTTTTTATTTTGGAGGTTTGATTTTTCTTTCGCGATGATTGTGCCTTTAAGTTCAGTGTATTGAGCATTCATTTTGTATAATATAAATTATCTGCCTTATAATCACTTCACTATAGCATTTTGTGGATTAATCGCTTCAGGCTACTTTCCATTATGGATTGATTACAGCTTTGCACAAGATACTGTAACTGATCATCGGTTCTTTTAATCTCTGATGATCATGTTATTGCAATGTGGTTTATGGGTTTTATGAGACAGTCTATTCAATTCGTCAAGCTGTTTAAGCAGCTTAATTATTCTTTTGCACACAGGTATTCAACTGGATGGAAAACCAACAAAAATTCCGCATAAACCCAGCTGATCATGCTCTGAAGTTGGAGTTAATCGCTAAAAACTGTGGGCTAATGGAAGCTGAAGAATATTTTATGCATATACCTGACTCAGCTGGAAAGAAAGCCGCCTATCTCCCACTTCTACGTGGCTATGTAGGAGATAGGGACACCAGTAAAGCTGAGACGTTCATGGAGAAGCTCTATGAACTGGGGCTAGTGGTAAACGCTCACCCTTATAATGAAATGATGAAACTATATCTTGCCACATGTGAGTACCAAAAGGTACCCCTAGTTATCCAACAAATAAAACGAAATAAAGTACCCTTGAATGTTCTGTCTTACAACCTTTGGATGAGTGCTTGTGATGAGGGAGAGCGATATGGGGTTGCAGCAGTGGAAACAGTTTTTAGAGAAATGCAAAATGATGAGAATGTTGAAATGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTGTATATGAAAGCAGGACAATATGAGAAAGCCATTCTAGTTCTAAAAAATGCCGAAGAGAAACTGTCTACATGTAATCGTCTTGGTTACTTCTTCATCATAACACTATACGCCTCTTTGAAGCAAAAGGAGGGAGTCTTGCGGCTGTGGGAAGCCAGTAAGGCAGTTGGTGGAAGAATCAGTTGTGCCAACTATATTTGCATACTAACAAGCTTGGTGAAGCTTGGGGACATAGCACAAGCCAGAAGAATCTTCAGAGAATGGGAATCTAATTGTCAAAAATATGATATCAGAGTCTCTAATGTTCTTTTAGGAGCATATGTGCGGAATGGATTAATAGAAGAAGCTGAATCATTGCATCTCCACACATTGCAGAAGGGGGGCTGTCCAAACTACAAGACGTGGGAAATTCTCATTGAAGGATATGTCAATTGGCAAAAGATGGATGAGGCTATTATTGCCATGAAAAGAGCTTTGGCTATGTTGAAAGACTGCCATTGGAGGCCGCCACAAAGAATTGTATTAGCCATAGCTGAATATTTGGAGAAATGTGGGAATTTTGAATATGCAAATGAGTACATCACAGATATTCATAATTTAGGTCTTGGAAGTTTATCATTGTATAAAATATTGCTTAGAATGCACCTTTCTGCTCAAGAACCACCTTTCCATGTCCTTAAAATGATCAATAAAGACAAAATGGAGATGGATAGTGAGACTGTTTCCATTCTTAAAGGCTTCACTGGGTAA
Protein sequence

>MS.gene38571.t1

MANQSLTAVIRRYDTLNLSLTNSPYTSSLRSSISFFLGARTLYAHADSRTSTFSDKQNLKSLIARFKPSTQTPLPVLQNWVDQGNKLSSSELRCISRRLIKSKRYNHAFEVFNWMENQQKFRINPADHALKLELIAKNCGLMEAEEYFMHIPDSAGKKAAYLPLLRGYVGDRDTSKAETFMEKLYELGLVVNAHPYNEMMKLYLATCEYQKVPLVIQQIKRNKVPLNVLSYNLWMSACDEGERYGVAAVETVFREMQNDENVEMGWSSLATLANVYMKAGQYEKAILVLKNAEEKLSTCNRLGYFFIITLYASLKQKEGVLRLWEASKAVGGRISCANYICILTSLVKLGDIAQARRIFREWESNCQKYDIRVSNVLLGAYVRNGLIEEAESLHLHTLQKGGCPNYKTWEILIEGYVNWQKMDEAIIAMKRALAMLKDCHWRPPQRIVLAIAEYLEKCGNFEYANEYITDIHNLGLGSLSLYKILLRMHLSAQEPPFHVLKMINKDKMEMDSETVSILKGFTG