Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38803.t1 | RHN47770.1 | 92.4 | 394 | 29 | 1 | 1 | 393 | 31 | 424 | 1.80E-214 | 755 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38803.t1 | Q9SLG8 | 53.8 | 338 | 137 | 9 | 55 | 384 | 48 | 374 | 8.0e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38803.t1 | G7KRP1 | 92.4 | 394 | 29 | 1 | 1 | 393 | 1 | 394 | 1.3e-214 | 755.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050670 | MS.gene38803 | 0.805084 | 1.58E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene38803 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene38803 | 0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene058700 | MS.gene38803 | 0.823003 | 1.75E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene38803 | 0.806766 | 7.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38803.t1 | MTR_7g090320 | 93.909 | 394 | 23 | 1 | 1 | 393 | 1 | 394 | 0.0 | 768 |
| MS.gene38803.t1 | MTR_7g090310 | 91.371 | 394 | 32 | 2 | 1 | 393 | 1 | 393 | 0.0 | 746 |
| MS.gene38803.t1 | MTR_7g490350 | 47.432 | 331 | 162 | 4 | 55 | 385 | 50 | 368 | 1.36e-107 | 321 |
| MS.gene38803.t1 | MTR_7g090300 | 42.857 | 385 | 203 | 7 | 1 | 385 | 1 | 368 | 2.01e-103 | 310 |
| MS.gene38803.t1 | MTR_7g490330 | 45.455 | 330 | 130 | 4 | 56 | 385 | 45 | 324 | 1.36e-98 | 296 |
| MS.gene38803.t1 | MTR_2g087780 | 46.201 | 329 | 169 | 7 | 58 | 385 | 73 | 394 | 6.33e-94 | 287 |
| MS.gene38803.t1 | MTR_4g050190 | 45.427 | 328 | 170 | 8 | 58 | 384 | 70 | 389 | 3.49e-92 | 282 |
| MS.gene38803.t1 | MTR_5g091980 | 42.075 | 347 | 147 | 7 | 39 | 385 | 30 | 322 | 8.40e-86 | 264 |
| MS.gene38803.t1 | MTR_2g099030 | 37.190 | 363 | 200 | 7 | 26 | 376 | 50 | 396 | 4.27e-82 | 257 |
| MS.gene38803.t1 | MTR_4g112670 | 37.647 | 340 | 181 | 7 | 41 | 380 | 22 | 330 | 7.43e-67 | 215 |
| MS.gene38803.t1 | MTR_4g112630 | 37.764 | 331 | 160 | 7 | 57 | 384 | 37 | 324 | 2.72e-66 | 214 |
| MS.gene38803.t1 | MTR_2g058450 | 36.562 | 320 | 171 | 4 | 57 | 376 | 39 | 326 | 9.03e-65 | 210 |
| MS.gene38803.t1 | MTR_4g112650 | 37.690 | 329 | 170 | 8 | 58 | 384 | 38 | 333 | 4.74e-62 | 203 |
| MS.gene38803.t1 | MTR_4g112620 | 31.003 | 329 | 154 | 6 | 58 | 384 | 42 | 299 | 1.59e-43 | 154 |
| MS.gene38803.t1 | MTR_2g058410 | 36.078 | 255 | 135 | 4 | 128 | 381 | 1 | 228 | 4.73e-40 | 142 |
| MS.gene38803.t1 | MTR_8g074170 | 29.268 | 328 | 192 | 6 | 58 | 385 | 78 | 365 | 3.30e-36 | 136 |
| MS.gene38803.t1 | MTR_8g074270 | 29.268 | 328 | 192 | 6 | 58 | 385 | 78 | 365 | 1.06e-35 | 134 |
| MS.gene38803.t1 | MTR_0003s0530 | 36.275 | 204 | 106 | 2 | 173 | 376 | 2 | 181 | 4.18e-35 | 128 |
| MS.gene38803.t1 | MTR_8g074210 | 27.463 | 335 | 193 | 7 | 56 | 385 | 76 | 365 | 1.00e-33 | 129 |
| MS.gene38803.t1 | MTR_2g042420 | 27.062 | 388 | 234 | 12 | 5 | 384 | 1 | 347 | 1.90e-31 | 122 |
| MS.gene38803.t1 | MTR_2g042370 | 27.826 | 345 | 205 | 10 | 45 | 384 | 50 | 355 | 4.87e-31 | 121 |
| MS.gene38803.t1 | MTR_2g042430 | 27.666 | 347 | 200 | 11 | 45 | 383 | 62 | 365 | 3.35e-29 | 117 |
| MS.gene38803.t1 | MTR_4g112840 | 42.268 | 97 | 56 | 0 | 199 | 295 | 56 | 152 | 2.75e-22 | 93.2 |
| MS.gene38803.t1 | MTR_1g075865 | 37.755 | 98 | 61 | 0 | 184 | 281 | 13 | 110 | 6.77e-20 | 85.5 |
| MS.gene38803.t1 | MTR_8g074320 | 36.641 | 131 | 79 | 3 | 122 | 250 | 92 | 220 | 6.19e-18 | 82.4 |
| MS.gene38803.t1 | MTR_2g058430 | 38.372 | 86 | 52 | 1 | 113 | 198 | 46 | 130 | 3.39e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38803.t1 | AT2G41290 | 53.488 | 344 | 140 | 10 | 49 | 384 | 43 | 374 | 2.64e-122 | 359 |
| MS.gene38803.t1 | AT3G57030 | 44.675 | 385 | 195 | 6 | 7 | 385 | 1 | 373 | 1.97e-111 | 331 |
| MS.gene38803.t1 | AT1G08470 | 45.897 | 329 | 168 | 7 | 58 | 385 | 69 | 388 | 3.08e-93 | 285 |
| MS.gene38803.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38803.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38803.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38803.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38803.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38803.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38803.t1 | AT3G57010 | 37.371 | 388 | 219 | 8 | 7 | 392 | 11 | 376 | 3.96e-79 | 248 |
| MS.gene38803.t1 | AT3G57020 | 37.666 | 377 | 206 | 10 | 10 | 381 | 12 | 364 | 7.52e-79 | 248 |
| MS.gene38803.t1 | AT2G41300 | 40.312 | 320 | 176 | 6 | 63 | 381 | 83 | 388 | 3.45e-77 | 244 |
| MS.gene38803.t1 | AT3G57020 | 36.340 | 377 | 197 | 10 | 10 | 381 | 12 | 350 | 1.13e-73 | 234 |
| MS.gene38803.t1 | AT1G74010 | 37.237 | 333 | 165 | 10 | 50 | 380 | 29 | 319 | 1.39e-57 | 191 |
| MS.gene38803.t1 | AT1G74000 | 35.629 | 334 | 170 | 8 | 50 | 380 | 32 | 323 | 1.77e-55 | 186 |
| MS.gene38803.t1 | AT1G74020 | 34.639 | 332 | 176 | 7 | 50 | 380 | 30 | 321 | 4.45e-55 | 185 |
| MS.gene38803.t1 | AT3G51430 | 34.392 | 189 | 117 | 5 | 125 | 312 | 113 | 295 | 1.26e-25 | 107 |
| MS.gene38803.t1 | AT3G51420 | 29.565 | 230 | 150 | 7 | 125 | 353 | 113 | 331 | 1.92e-25 | 106 |
| MS.gene38803.t1 | AT3G51440 | 33.161 | 193 | 122 | 5 | 125 | 316 | 113 | 299 | 4.15e-25 | 105 |
| MS.gene38803.t1 | AT3G51430 | 33.862 | 189 | 116 | 6 | 125 | 312 | 113 | 293 | 2.99e-24 | 103 |
| MS.gene38803.t1 | AT3G51450 | 27.157 | 313 | 191 | 11 | 11 | 317 | 19 | 300 | 6.19e-24 | 102 |
Find 104 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGAGATGGAGTATTA+TGG | 0.214695 | 7.1:-16930296 | MS.gene38803:CDS |
| CCACATATGTGTTCTTTCTT+TGG | 0.231810 | 7.1:+16931780 | None:intergenic |
| ACTTCCAATGTTCCAGCTTT+AGG | 0.237744 | 7.1:+16930603 | None:intergenic |
| CCTTCGGAGTTTCCGATGTT+TGG | 0.289970 | 7.1:-16934284 | MS.gene38803:CDS |
| GGAGTCCAAGAGGAGGGTTT+TGG | 0.319896 | 7.1:-16930542 | MS.gene38803:CDS |
| TTCTTTGGATGCTCCTTGTA+TGG | 0.320582 | 7.1:+16931795 | None:intergenic |
| CTACAAAATGTAGAATATTA+AGG | 0.335376 | 7.1:-16930641 | MS.gene38803:CDS |
| GGAAAGAGATGGAGTATTAT+GGG | 0.336513 | 7.1:-16930295 | MS.gene38803:CDS |
| GGAGTACTGGATTGGCAATT+AGG | 0.337863 | 7.1:-16930395 | MS.gene38803:CDS |
| AATGTAGAATATTAAGGTAT+TGG | 0.356659 | 7.1:-16930635 | MS.gene38803:CDS |
| TTTGGCTTTCACAAACAGTT+TGG | 0.368869 | 7.1:-16931622 | MS.gene38803:CDS |
| CACATATGTGGGCGCCCACT+TGG | 0.369191 | 7.1:-16931768 | MS.gene38803:CDS |
| CACGGTGAAGGACCTTATAC+TGG | 0.415839 | 7.1:-16934195 | MS.gene38803:CDS |
| CCATCGGAAACTCCAGTATA+AGG | 0.420556 | 7.1:+16934183 | None:intergenic |
| AAATATCCTTGGATAGGAAA+AGG | 0.423941 | 7.1:-16930474 | MS.gene38803:CDS |
| TTGGATATTGATCAACGAAC+TGG | 0.446101 | 7.1:-16931603 | MS.gene38803:CDS |
| TCTCTCATATTTAGAACTGC+TGG | 0.447647 | 7.1:+16931563 | None:intergenic |
| TGATGTTTCTGTGACATCCT+TGG | 0.456615 | 7.1:+16934308 | None:intergenic |
| AACAATCTCACATTTGCAAA+TGG | 0.458350 | 7.1:-16930708 | MS.gene38803:CDS |
| TGCAGCAGAAGAACAACCTT+TGG | 0.462301 | 7.1:-16931640 | MS.gene38803:CDS |
| TTGTGCTTCAACGTAGCATC+TGG | 0.463806 | 7.1:-16931744 | MS.gene38803:CDS |
| CATATTTGGCTAAGGTGAAA+GGG | 0.464547 | 7.1:-16930416 | MS.gene38803:CDS |
| AACACCTAAAGCTGGAACAT+TGG | 0.466304 | 7.1:-16930607 | MS.gene38803:CDS |
| ATCATAGAAGTGGTAATAGA+AGG | 0.466599 | 7.1:-16930335 | MS.gene38803:CDS |
| AATGGATGCTAAAATATCCT+TGG | 0.469758 | 7.1:-16930485 | MS.gene38803:CDS |
| AACTTATTCATATTTGGCTA+AGG | 0.473266 | 7.1:-16930424 | MS.gene38803:CDS |
| TGAATACGGCGCCGTTGGAC+CGG | 0.480181 | 7.1:-16934238 | MS.gene38803:CDS |
| TACTTGTCTTTGATCCTAAG+TGG | 0.481110 | 7.1:-16930792 | MS.gene38803:CDS |
| TTATGTTGCTGACGCATACA+TGG | 0.486166 | 7.1:-16931715 | MS.gene38803:CDS |
| TCATATTTGGCTAAGGTGAA+AGG | 0.488191 | 7.1:-16930417 | MS.gene38803:CDS |
| TTGTTATACTTAATAACAAA+AGG | 0.490638 | 7.1:+16930255 | None:intergenic |
| AGTGAGGTTGAGGAAAGAGA+TGG | 0.492716 | 7.1:-16930306 | MS.gene38803:CDS |
| CCAACCCAAAACCCTCCTCT+TGG | 0.502263 | 7.1:+16930537 | None:intergenic |
| TCCTTCACCGTGAGGGTCGA+AGG | 0.502621 | 7.1:+16934206 | None:intergenic |
| AATATCCTTGGATAGGAAAA+GGG | 0.503384 | 7.1:-16930473 | MS.gene38803:CDS |
| GCTAAGGTGAAAGGGAGTAC+TGG | 0.506609 | 7.1:-16930408 | MS.gene38803:CDS |
| CCGATTGAATACGGCGCCGT+TGG | 0.512132 | 7.1:-16934243 | MS.gene38803:CDS |
| GCACCTTACGGCGGCTGTCG+TGG | 0.513010 | 7.1:-16934379 | MS.gene38803:CDS |
| AATATGATTCCGATTGAATA+CGG | 0.514073 | 7.1:-16934252 | MS.gene38803:CDS |
| CCGATGGACATATCATCAAA+TGG | 0.514459 | 7.1:-16934167 | MS.gene38803:CDS |
| GCCTTCGACCCTCACGGTGA+AGG | 0.515139 | 7.1:-16934207 | MS.gene38803:CDS |
| GGGTCGAAGGCAAAACTCTC+CGG | 0.516696 | 7.1:+16934219 | None:intergenic |
| CTAGTTGTTATTGAGCCCAC+TGG | 0.517702 | 7.1:-16931690 | MS.gene38803:CDS |
| GGCACCGTCATCAGAACCGT+TGG | 0.520639 | 7.1:-16934146 | MS.gene38803:CDS |
| CCAACGGCGCCGTATTCAAT+CGG | 0.522160 | 7.1:+16934243 | None:intergenic |
| AAGGTCTATTAGTGAGGTTG+AGG | 0.522210 | 7.1:-16930316 | MS.gene38803:CDS |
| AGAGATGGAGTATTATGGGT+TGG | 0.527512 | 7.1:-16930291 | MS.gene38803:CDS |
| CTGCCACGACAGCCGCCGTA+AGG | 0.527552 | 7.1:+16934376 | None:intergenic |
| GAAGTCTTTGCTAATCTACC+AGG | 0.529415 | 7.1:-16930585 | MS.gene38803:CDS |
| ATGCTAAAATATCCTTGGAT+AGG | 0.532866 | 7.1:-16930480 | MS.gene38803:CDS |
| ACATATGTGGGCGCCCACTT+GGG | 0.533191 | 7.1:-16931767 | MS.gene38803:CDS |
| GTCACAGAAACATCAACCTT+CGG | 0.533655 | 7.1:-16934300 | MS.gene38803:CDS |
| ATCCTAAGTGGTGACAACTC+AGG | 0.535623 | 7.1:-16930780 | MS.gene38803:CDS |
| TTTATGTTGTCGGGAAAACC+TGG | 0.539609 | 7.1:+16930567 | None:intergenic |
| CCAAAGAAAGAACACATATG+TGG | 0.541865 | 7.1:-16931780 | MS.gene38803:CDS |
| GGCAAAACTCTCCGGTCCAA+CGG | 0.542787 | 7.1:+16934227 | None:intergenic |
| TCCTAAGTGGTGACAACTCA+GGG | 0.544685 | 7.1:-16930779 | MS.gene38803:CDS |
| GGCAATTAGGCTAAGTGAGG+AGG | 0.546325 | 7.1:-16930382 | MS.gene38803:CDS |
| GGTGAAAGGGAGTACTGGAT+TGG | 0.549277 | 7.1:-16930403 | MS.gene38803:CDS |
| AAGTGAGGAGGGTGATGTGT+TGG | 0.550992 | 7.1:-16930370 | MS.gene38803:CDS |
| TGGTTAGAAACACCTAAAGC+TGG | 0.557207 | 7.1:-16930615 | MS.gene38803:CDS |
| GAGGCCACAACTGCACCTTA+CGG | 0.558237 | 7.1:-16934391 | MS.gene38803:CDS |
| GCACCGTCATCAGAACCGTT+GGG | 0.561995 | 7.1:-16934145 | MS.gene38803:CDS |
| AGAGTGTGGAGGACCATACA+AGG | 0.571122 | 7.1:-16931808 | MS.gene38803:CDS |
| ATGCGTCAGCAACATAAAGT+TGG | 0.571537 | 7.1:+16931721 | None:intergenic |
| GTTTCTGTGACATCCTTGGA+TGG | 0.573578 | 7.1:+16934312 | None:intergenic |
| CCTCCCAACGGTTCTGATGA+CGG | 0.575799 | 7.1:+16934142 | None:intergenic |
| CCTTATACTGGAGTTTCCGA+TGG | 0.576811 | 7.1:-16934183 | MS.gene38803:CDS |
| TCCTTGGATAGGAAAAGGGT+TGG | 0.581523 | 7.1:-16930469 | MS.gene38803:CDS |
| ATTAAGTATAACAACTCTTG+TGG | 0.583196 | 7.1:-16930246 | MS.gene38803:CDS |
| AAACTGTTTGTGAAAGCCAA+AGG | 0.587101 | 7.1:+16931624 | None:intergenic |
| GCAGTTCTAAATATGAGAGA+AGG | 0.590598 | 7.1:-16931560 | MS.gene38803:intron |
| TTTCTAGCAATGCCACCAGT+GGG | 0.590642 | 7.1:+16931675 | None:intergenic |
| CCATTTGATGATATGTCCAT+CGG | 0.596449 | 7.1:+16934167 | None:intergenic |
| GCCGCCGTAAGGTGCAGTTG+TGG | 0.597374 | 7.1:+16934387 | None:intergenic |
| TATGTTGCTGACGCATACAT+GGG | 0.600191 | 7.1:-16931714 | MS.gene38803:CDS |
| GATGATGATGATGAAGAGTG+TGG | 0.601295 | 7.1:-16931822 | MS.gene38803:CDS |
| CAAAGAAAGAACACATATGT+GGG | 0.603235 | 7.1:-16931779 | MS.gene38803:CDS |
| TCCCTGAGTTGTCACCACTT+AGG | 0.607006 | 7.1:+16930778 | None:intergenic |
| CCGTGGAGTTACACCATCCA+AGG | 0.614288 | 7.1:-16934325 | MS.gene38803:CDS |
| GCAATTAGGCTAAGTGAGGA+GGG | 0.616806 | 7.1:-16930381 | MS.gene38803:CDS |
| CTCATATTTAGAACTGCTGG+AGG | 0.621135 | 7.1:+16931566 | None:intergenic |
| CCAAACATCGGAAACTCCGA+AGG | 0.621719 | 7.1:+16934284 | None:intergenic |
| TATAAGGTCCTTCACCGTGA+GGG | 0.624280 | 7.1:+16934199 | None:intergenic |
| AACATAAAACGGAGTCCAAG+AGG | 0.625086 | 7.1:-16930552 | MS.gene38803:CDS |
| CCTTGGATGGTGTAACTCCA+CGG | 0.625278 | 7.1:+16934325 | None:intergenic |
| CCGTCACTTCTTCTCCACAC+AGG | 0.627944 | 7.1:-16934113 | MS.gene38803:intron |
| TAATAGAAGGTCTATTAGTG+AGG | 0.628030 | 7.1:-16930322 | MS.gene38803:CDS |
| CGTTGAAGCACAACCCAAGT+GGG | 0.630882 | 7.1:+16931754 | None:intergenic |
| GTTGTTATTGAGCCCACTGG+TGG | 0.642085 | 7.1:-16931687 | MS.gene38803:CDS |
| TAAAACGGAGTCCAAGAGGA+GGG | 0.660053 | 7.1:-16930548 | MS.gene38803:CDS |
| ACGTTGAAGCACAACCCAAG+TGG | 0.670983 | 7.1:+16931753 | None:intergenic |
| CCGTCATCAGAACCGTTGGG+AGG | 0.672156 | 7.1:-16934142 | MS.gene38803:CDS |
| GCCACAACTGCACCTTACGG+CGG | 0.672386 | 7.1:-16934388 | MS.gene38803:CDS |
| ATAAAACGGAGTCCAAGAGG+AGG | 0.675619 | 7.1:-16930549 | MS.gene38803:CDS |
| CCTGTGTGGAGAAGAAGTGA+CGG | 0.679020 | 7.1:+16934113 | None:intergenic |
| ATTGGCAATTAGGCTAAGTG+AGG | 0.684553 | 7.1:-16930385 | MS.gene38803:CDS |
| GTATAAGGTCCTTCACCGTG+AGG | 0.685002 | 7.1:+16934198 | None:intergenic |
| ATTCTCGTATTGCCAAACAT+CGG | 0.691641 | 7.1:+16934272 | None:intergenic |
| GCATGGTTAGCATACAGCCG+TGG | 0.695844 | 7.1:-16934342 | MS.gene38803:CDS |
| GCTGAGAGTGTTAACCTGTG+TGG | 0.698613 | 7.1:+16934099 | None:intergenic |
| TGACGGCAAAGTCCTCCCAA+CGG | 0.704429 | 7.1:+16934130 | None:intergenic |
| GATGATGATGAAGAGTGTGG+AGG | 0.746405 | 7.1:-16931819 | MS.gene38803:CDS |
| TAAGTGGTGACAACTCAGGG+AGG | 0.758730 | 7.1:-16930776 | MS.gene38803:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAAGGTAATT+TGG | + | chr7.1:16933616-16933635 | None:intergenic | 10.0% |
| !! | AAAATATTAAAATTGGAAAA+TGG | + | chr7.1:16932436-16932455 | None:intergenic | 10.0% |
| !! | AATATGCAAAAAAATTAAAA+AGG | + | chr7.1:16933624-16933643 | None:intergenic | 10.0% |
| !! | ATGTAAAAATAAAGAAAAAG+AGG | + | chr7.1:16933679-16933698 | None:intergenic | 15.0% |
| !! | CTTTATATAAAAATACTACA+TGG | + | chr7.1:16932603-16932622 | None:intergenic | 15.0% |
| !! | GCGATTAAAAATATTAAAAT+TGG | + | chr7.1:16932443-16932462 | None:intergenic | 15.0% |
| !! | TTGTTATACTTAATAACAAA+AGG | + | chr7.1:16934371-16934390 | None:intergenic | 15.0% |
| !!! | AGTATTTTTAAAAACATGAA+TGG | - | chr7.1:16932345-16932364 | MS.gene38803:intron | 15.0% |
| !!! | GAATTATACGTATATTATTT+TGG | + | chr7.1:16931828-16931847 | None:intergenic | 15.0% |
| !!! | TTAATATTTTTAATCGCAAT+TGG | - | chr7.1:16932446-16932465 | MS.gene38803:intron | 15.0% |
| !!! | TTGATCTAAAATTAGAAAAT+TGG | + | chr7.1:16931803-16931822 | None:intergenic | 15.0% |
| !! | AATGTAGAATATTAAGGTAT+TGG | - | chr7.1:16933988-16934007 | MS.gene38803:intron | 20.0% |
| !! | ATACATATATATAATGGTGT+AGG | - | chr7.1:16931716-16931735 | MS.gene38803:CDS | 20.0% |
| !! | ATGGAGAATAGTTATTATTA+TGG | - | chr7.1:16931604-16931623 | MS.gene38803:CDS | 20.0% |
| !! | CACAAAAACTTATTCATATT+TGG | - | chr7.1:16934193-16934212 | MS.gene38803:CDS | 20.0% |
| !! | CTACAAAATGTAGAATATTA+AGG | - | chr7.1:16933982-16934001 | MS.gene38803:intron | 20.0% |
| !! | TAAAGCTTCATATAACTTTA+AGG | + | chr7.1:16933750-16933769 | None:intergenic | 20.0% |
| !! | TAAATATGCATACCAATATA+TGG | - | chr7.1:16933396-16933415 | MS.gene38803:intron | 20.0% |
| !! | TACTACTATATATTAGTGTA+GGG | - | chr7.1:16931677-16931696 | MS.gene38803:CDS | 20.0% |
| !! | TCTTCATTAAAATGTATTCA+AGG | - | chr7.1:16930715-16930734 | MS.gene38803:CDS | 20.0% |
| !! | TGTACTACATTAATTCTTAT+AGG | - | chr7.1:16930628-16930647 | MS.gene38803:CDS | 20.0% |
| !! | TTACTACTATATATTAGTGT+AGG | - | chr7.1:16931676-16931695 | MS.gene38803:CDS | 20.0% |
| !! | TTGACTTTAAATTTGAATGT+AGG | + | chr7.1:16933326-16933345 | None:intergenic | 20.0% |
| !!! | ATCATTTTATTCCATAGTAA+AGG | - | chr7.1:16933653-16933672 | MS.gene38803:intron | 20.0% |
| !!! | CTTTTGGATAAATTAAAAGA+TGG | - | chr7.1:16931585-16931604 | MS.gene38803:CDS | 20.0% |
| !!! | GTTTTATATTTTAATGAACC+AGG | - | chr7.1:16932302-16932321 | MS.gene38803:intron | 20.0% |
| !!! | TAGTATATATTAATGGATGA+TGG | - | chr7.1:16930657-16930676 | MS.gene38803:CDS | 20.0% |
| !!! | TTTTGTATGTATCTTATTCA+TGG | - | chr7.1:16931449-16931468 | MS.gene38803:intron | 20.0% |
| ! | AAAATAGTACCGTTGTTTAA+CGG | + | chr7.1:16933535-16933554 | None:intergenic | 25.0% |
| ! | AACTTATTCATATTTGGCTA+AGG | - | chr7.1:16934199-16934218 | MS.gene38803:CDS | 25.0% |
| ! | AATAAGATGAGATGAACAAT+TGG | + | chr7.1:16932739-16932758 | None:intergenic | 25.0% |
| ! | AATATGATTCCGATTGAATA+CGG | - | chr7.1:16930371-16930390 | MS.gene38803:CDS | 25.0% |
| ! | AATGCTTATAAGTTACATAC+GGG | + | chr7.1:16931536-16931555 | None:intergenic | 25.0% |
| ! | ATGAATGTATCAAATCACTT+TGG | - | chr7.1:16930821-16930840 | MS.gene38803:intron | 25.0% |
| ! | ATGTTGTTCATCTATTAACA+AGG | + | chr7.1:16932516-16932535 | None:intergenic | 25.0% |
| ! | ATTAAGTATAACAACTCTTG+TGG | - | chr7.1:16934377-16934396 | MS.gene38803:CDS | 25.0% |
| ! | CATTAAAATGTATTCAAGGA+GGG | - | chr7.1:16930719-16930738 | MS.gene38803:CDS | 25.0% |
| ! | CTACATTAATTCTTATAGGA+TGG | - | chr7.1:16930632-16930651 | MS.gene38803:CDS | 25.0% |
| ! | GAAGAGAAAAATTTATCCAA+TGG | - | chr7.1:16934120-16934139 | MS.gene38803:CDS | 25.0% |
| ! | GAATGCTTATAAGTTACATA+CGG | + | chr7.1:16931537-16931556 | None:intergenic | 25.0% |
| ! | GATTAATAACCGTTAAACAA+CGG | - | chr7.1:16933523-16933542 | MS.gene38803:intron | 25.0% |
| ! | GTTTATCAAACTTGTAACTT+TGG | + | chr7.1:16930983-16931002 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTATTCAAGG+AGG | - | chr7.1:16930718-16930737 | MS.gene38803:CDS | 25.0% |
| ! | TGCAAAGTGCAATAAATATA+AGG | + | chr7.1:16931227-16931246 | None:intergenic | 25.0% |
| ! | TGTATATTCATATTAGTCGT+GGG | + | chr7.1:16931005-16931024 | None:intergenic | 25.0% |
| ! | TGTTGTTCATCTATTAACAA+GGG | + | chr7.1:16932515-16932534 | None:intergenic | 25.0% |
| !! | ATTTGACAAAAGTTCTCTTT+TGG | - | chr7.1:16931569-16931588 | MS.gene38803:CDS | 25.0% |
| !! | GAATAAGTTTTTGTGTCTAA+AGG | + | chr7.1:16934188-16934207 | None:intergenic | 25.0% |
| !! | GTAACTTATAAGCATTCTTT+TGG | - | chr7.1:16931540-16931559 | MS.gene38803:intron | 25.0% |
| !! | TGTAAAAGTGGTTTATGTTT+TGG | - | chr7.1:16933226-16933245 | MS.gene38803:intron | 25.0% |
| !!! | AATTGAGTTGAATGTAAAAG+TGG | - | chr7.1:16933214-16933233 | MS.gene38803:intron | 25.0% |
| !!! | ATTTTTGAAGATCATAGAAG+TGG | - | chr7.1:16934278-16934297 | MS.gene38803:CDS | 25.0% |
| !!! | GATGGACTAGTATATATTAA+TGG | - | chr7.1:16930650-16930669 | MS.gene38803:CDS | 25.0% |
| !!! | GTGCAAATTTTGAAATTTCA+GGG | + | chr7.1:16931198-16931217 | None:intergenic | 25.0% |
| !!! | GTTGTGAAATAAAGTTGATA+TGG | - | chr7.1:16932759-16932778 | MS.gene38803:intron | 25.0% |
| !!! | TAAAGTTGATATGGTTGATT+TGG | - | chr7.1:16932768-16932787 | MS.gene38803:intron | 25.0% |
| !!! | TGTGCAAATTTTGAAATTTC+AGG | + | chr7.1:16931199-16931218 | None:intergenic | 25.0% |
| AAAACTGAAGTAAGAAGTGA+AGG | - | chr7.1:16931303-16931322 | MS.gene38803:intron | 30.0% | |
| AAAGACCTAACACTTATCTT+GGG | - | chr7.1:16932050-16932069 | MS.gene38803:intron | 30.0% | |
| AAATATCCTTGGATAGGAAA+AGG | - | chr7.1:16934149-16934168 | MS.gene38803:CDS | 30.0% | |
| AACAATCTCACATTTGCAAA+TGG | - | chr7.1:16933915-16933934 | MS.gene38803:intron | 30.0% | |
| AATATCCTTGGATAGGAAAA+GGG | - | chr7.1:16934150-16934169 | MS.gene38803:CDS | 30.0% | |
| AATGGATGCTAAAATATCCT+TGG | - | chr7.1:16934138-16934157 | MS.gene38803:CDS | 30.0% | |
| ACAAAACCCTAGTTAATTGT+TGG | + | chr7.1:16931435-16931454 | None:intergenic | 30.0% | |
| ACACAAACACCTTAAATAAG+GGG | - | chr7.1:16933438-16933457 | MS.gene38803:intron | 30.0% | |
| ACTCAAGATCAACATTTGTA+GGG | - | chr7.1:16932272-16932291 | MS.gene38803:intron | 30.0% | |
| AGACACAAACACCTTAAATA+AGG | - | chr7.1:16933436-16933455 | MS.gene38803:intron | 30.0% | |
| AGTGTTTAGCTATAAGTTTG+AGG | - | chr7.1:16931046-16931065 | MS.gene38803:intron | 30.0% | |
| ATCATAGAAGTGGTAATAGA+AGG | - | chr7.1:16934288-16934307 | MS.gene38803:CDS | 30.0% | |
| ATGCTAAAATATCCTTGGAT+AGG | - | chr7.1:16934143-16934162 | MS.gene38803:CDS | 30.0% | |
| ATGCTTATAAGTTACATACG+GGG | + | chr7.1:16931535-16931554 | None:intergenic | 30.0% | |
| ATGTATCTTATTCATGGACT+TGG | - | chr7.1:16931455-16931474 | MS.gene38803:intron | 30.0% | |
| CAAAATACTCCTTTAGCTAT+TGG | + | chr7.1:16931098-16931117 | None:intergenic | 30.0% | |
| CAAAGAAAGAACACATATGT+GGG | - | chr7.1:16932844-16932863 | MS.gene38803:intron | 30.0% | |
| GACACAAACACCTTAAATAA+GGG | - | chr7.1:16933437-16933456 | MS.gene38803:intron | 30.0% | |
| GATAATAGGTTCTTTCACTA+TGG | - | chr7.1:16932372-16932391 | MS.gene38803:intron | 30.0% | |
| GCAAGATGTTCAATAAAAGA+CGG | - | chr7.1:16932468-16932487 | MS.gene38803:intron | 30.0% | |
| GTGTATATTCATATTAGTCG+TGG | + | chr7.1:16931006-16931025 | None:intergenic | 30.0% | |
| TAAAGACCTAACACTTATCT+TGG | - | chr7.1:16932049-16932068 | MS.gene38803:intron | 30.0% | |
| TAATAGAAGGTCTATTAGTG+AGG | - | chr7.1:16934301-16934320 | MS.gene38803:CDS | 30.0% | |
| TACTCAAGATCAACATTTGT+AGG | - | chr7.1:16932271-16932290 | MS.gene38803:intron | 30.0% | |
| TGTATCTTATTCATGGACTT+GGG | - | chr7.1:16931456-16931475 | MS.gene38803:intron | 30.0% | |
| TTTAATGAAGAGAAGCTTTC+TGG | + | chr7.1:16930706-16930725 | None:intergenic | 30.0% | |
| ! | AACACATTTTGCATGAACAA+AGG | + | chr7.1:16930590-16930609 | None:intergenic | 30.0% |
| ! | ATGAAGTGTCCTATCAAATT+AGG | - | chr7.1:16932407-16932426 | MS.gene38803:intron | 30.0% |
| ! | GATTAGCCAACAATTAACTA+GGG | - | chr7.1:16931426-16931445 | MS.gene38803:intron | 30.0% |
| ! | TGATTAGCCAACAATTAACT+AGG | - | chr7.1:16931425-16931444 | MS.gene38803:intron | 30.0% |
| ! | TGCATATTTAACTTCACTCT+TGG | + | chr7.1:16933386-16933405 | None:intergenic | 30.0% |
| !! | ATTTTAATGAACCAGGTAGT+TGG | - | chr7.1:16932309-16932328 | MS.gene38803:intron | 30.0% |
| !!! | AAGGATATTTTAGCATCCAT+TGG | + | chr7.1:16934139-16934158 | None:intergenic | 30.0% |
| !!! | ACATTGACTTGTTCACTTTT+TGG | + | chr7.1:16933888-16933907 | None:intergenic | 30.0% |
| AAACTGTTTGTGAAAGCCAA+AGG | + | chr7.1:16933002-16933021 | None:intergenic | 35.0% | |
| AAATGGTCGCCTAATTTGAT+AGG | + | chr7.1:16932419-16932438 | None:intergenic | 35.0% | |
| AACACCTTAAATAAGGGGTT+AGG | - | chr7.1:16933443-16933462 | MS.gene38803:intron | 35.0% | |
| AACTTCGTCACTAACACTAA+TGG | - | chr7.1:16932024-16932043 | MS.gene38803:intron | 35.0% | |
| ACATGAATGGAGCTGATAAT+AGG | - | chr7.1:16932358-16932377 | MS.gene38803:intron | 35.0% | |
| AGAAAAAGAGGCCTTTACTA+TGG | + | chr7.1:16933667-16933686 | None:intergenic | 35.0% | |
| AGATAGTGTGTCAAAGAAAG+AGG | + | chr7.1:16930549-16930568 | None:intergenic | 35.0% | |
| AGGACACTTCATTGTTAGTA+AGG | + | chr7.1:16932399-16932418 | None:intergenic | 35.0% | |
| ATTCTCGTATTGCCAAACAT+CGG | + | chr7.1:16930354-16930373 | None:intergenic | 35.0% | |
| CAACTGAATTTGAATTCCGT+TGG | - | chr7.1:16930902-16930921 | MS.gene38803:intron | 35.0% | |
| CACTGGAATCAACCATATAT+TGG | + | chr7.1:16933411-16933430 | None:intergenic | 35.0% | |
| CCAAAGAAAGAACACATATG+TGG | - | chr7.1:16932843-16932862 | MS.gene38803:intron | 35.0% | |
| CCACATATGTGTTCTTTCTT+TGG | + | chr7.1:16932846-16932865 | None:intergenic | 35.0% | |
| TAAAAATACTAGTAGCCGCA+AGG | + | chr7.1:16932335-16932354 | None:intergenic | 35.0% | |
| TACTTGTCTTTGATCCTAAG+TGG | - | chr7.1:16933831-16933850 | MS.gene38803:intron | 35.0% | |
| TCAAATCACTTTGGTAAACG+AGG | - | chr7.1:16930830-16930849 | MS.gene38803:intron | 35.0% | |
| TCATATTTGGCTAAGGTGAA+AGG | - | chr7.1:16934206-16934225 | MS.gene38803:CDS | 35.0% | |
| TGTAACAGAATAGTGAACCA+CGG | + | chr7.1:16931274-16931293 | None:intergenic | 35.0% | |
| TTGGATATTGATCAACGAAC+TGG | - | chr7.1:16933020-16933039 | MS.gene38803:intron | 35.0% | |
| ! | AACTCCTAACCCCTTATTTA+AGG | + | chr7.1:16933450-16933469 | None:intergenic | 35.0% |
| ! | ACTTGGGTCAAATGTTACTT+TGG | - | chr7.1:16931472-16931491 | MS.gene38803:intron | 35.0% |
| ! | AGGAAAGAGATGGAGTATTA+TGG | - | chr7.1:16934327-16934346 | MS.gene38803:CDS | 35.0% |
| ! | CAATATATGGTTGATTCCAG+TGG | - | chr7.1:16933409-16933428 | MS.gene38803:intron | 35.0% |
| ! | CCATTTGATGATATGTCCAT+CGG | + | chr7.1:16930459-16930478 | None:intergenic | 35.0% |
| ! | GGAAAGAGATGGAGTATTAT+GGG | - | chr7.1:16934328-16934347 | MS.gene38803:CDS | 35.0% |
| ! | GGTGCAAAGAGAAATTTTCA+GGG | + | chr7.1:16931252-16931271 | None:intergenic | 35.0% |
| ! | GTTTTCCCGACAACATAAAA+CGG | - | chr7.1:16934060-16934079 | MS.gene38803:intron | 35.0% |
| ! | TCAACACAAGTTGAGTTTGT+TGG | + | chr7.1:16931125-16931144 | None:intergenic | 35.0% |
| ! | TCTCTCATATTTAGAACTGC+TGG | + | chr7.1:16933063-16933082 | None:intergenic | 35.0% |
| !! | CTTGGGTCAAATGTTACTTT+GGG | - | chr7.1:16931473-16931492 | MS.gene38803:intron | 35.0% |
| !! | GCAGTTCTAAATATGAGAGA+AGG | - | chr7.1:16933063-16933082 | MS.gene38803:intron | 35.0% |
| !! | TTTGGCTTTCACAAACAGTT+TGG | - | chr7.1:16933001-16933020 | MS.gene38803:intron | 35.0% |
| AAAATTTCTCTTTGCACCCG+TGG | - | chr7.1:16931254-16931273 | MS.gene38803:intron | 40.0% | |
| AAATGTATTCAAGGAGGGTC+AGG | - | chr7.1:16930724-16930743 | MS.gene38803:CDS | 40.0% | |
| AACACCTAAAGCTGGAACAT+TGG | - | chr7.1:16934016-16934035 | MS.gene38803:intron | 40.0% | |
| AACATAAAACGGAGTCCAAG+AGG | - | chr7.1:16934071-16934090 | MS.gene38803:intron | 40.0% | |
| AAGGTCTATTAGTGAGGTTG+AGG | - | chr7.1:16934307-16934326 | MS.gene38803:CDS | 40.0% | |
| AATGTATTCAAGGAGGGTCA+GGG | - | chr7.1:16930725-16930744 | MS.gene38803:CDS | 40.0% | |
| ACCTAACACTTATCTTGGGA+CGG | - | chr7.1:16932054-16932073 | MS.gene38803:intron | 40.0% | |
| ACTTCCAATGTTCCAGCTTT+AGG | + | chr7.1:16934023-16934042 | None:intergenic | 40.0% | |
| ATGAACCAGAGAAGAAGATG+AGG | - | chr7.1:16931380-16931399 | MS.gene38803:intron | 40.0% | |
| ATGCGTCAGCAACATAAAGT+TGG | + | chr7.1:16932905-16932924 | None:intergenic | 40.0% | |
| ATTGGCAATTAGGCTAAGTG+AGG | - | chr7.1:16934238-16934257 | MS.gene38803:CDS | 40.0% | |
| CATCTCTTAAAGTCCACTCT+TGG | + | chr7.1:16931499-16931518 | None:intergenic | 40.0% | |
| CATGAACAAAGGAATACACG+TGG | + | chr7.1:16930579-16930598 | None:intergenic | 40.0% | |
| CCAAGGAATGTTGAGAAAGA+GGG | - | chr7.1:16932189-16932208 | MS.gene38803:intron | 40.0% | |
| CCGATGGACATATCATCAAA+TGG | - | chr7.1:16930456-16930475 | MS.gene38803:CDS | 40.0% | |
| CCTCTTTCTCAACATTCCTT+GGG | + | chr7.1:16932191-16932210 | None:intergenic | 40.0% | |
| CTCTTTCTCAACATTCCTTG+GGG | + | chr7.1:16932190-16932209 | None:intergenic | 40.0% | |
| GAAGTCTTTGCTAATCTACC+AGG | - | chr7.1:16934038-16934057 | MS.gene38803:intron | 40.0% | |
| GAATGTTGAGAAAGAGGGAT+CGG | - | chr7.1:16932194-16932213 | MS.gene38803:intron | 40.0% | |
| GACAATCCAAACATGACCAA+CGG | + | chr7.1:16930921-16930940 | None:intergenic | 40.0% | |
| GGAGTAGCACTTAGCAAAAA+TGG | - | chr7.1:16933936-16933955 | MS.gene38803:intron | 40.0% | |
| GGTAAACGAGGTAAGAAAGA+GGG | - | chr7.1:16930842-16930861 | MS.gene38803:intron | 40.0% | |
| GTAACAGAATAGTGAACCAC+GGG | + | chr7.1:16931273-16931292 | None:intergenic | 40.0% | |
| GTCACAGAAACATCAACCTT+CGG | - | chr7.1:16930323-16930342 | MS.gene38803:CDS | 40.0% | |
| GTGTGTCTCGTGAAAAATAC+AGG | - | chr7.1:16933805-16933824 | MS.gene38803:intron | 40.0% | |
| TATGTTGCTGACGCATACAT+GGG | - | chr7.1:16932909-16932928 | MS.gene38803:intron | 40.0% | |
| TGAACCAGAGAAGAAGATGA+GGG | - | chr7.1:16931381-16931400 | MS.gene38803:intron | 40.0% | |
| TGAATTCCGTTGGTCATGTT+TGG | - | chr7.1:16930912-16930931 | MS.gene38803:intron | 40.0% | |
| TGGTAAACGAGGTAAGAAAG+AGG | - | chr7.1:16930841-16930860 | MS.gene38803:intron | 40.0% | |
| TGGTTAGAAACACCTAAAGC+TGG | - | chr7.1:16934008-16934027 | MS.gene38803:intron | 40.0% | |
| TTATGTTGCTGACGCATACA+TGG | - | chr7.1:16932908-16932927 | MS.gene38803:intron | 40.0% | |
| TTCTTTGGATGCTCCTTGTA+TGG | + | chr7.1:16932831-16932850 | None:intergenic | 40.0% | |
| TTTATGTTGTCGGGAAAACC+TGG | + | chr7.1:16934059-16934078 | None:intergenic | 40.0% | |
| ! | ACTTGTGTTGACATAGAGTC+AGG | - | chr7.1:16931134-16931153 | MS.gene38803:intron | 40.0% |
| ! | AGAGATGGAGTATTATGGGT+TGG | - | chr7.1:16934332-16934351 | MS.gene38803:CDS | 40.0% |
| ! | CTCATATTTAGAACTGCTGG+AGG | + | chr7.1:16933060-16933079 | None:intergenic | 40.0% |
| ! | CTTGTGTTGACATAGAGTCA+GGG | - | chr7.1:16931135-16931154 | MS.gene38803:intron | 40.0% |
| ! | GATGATGATGATGAAGAGTG+TGG | - | chr7.1:16932801-16932820 | MS.gene38803:intron | 40.0% |
| ! | GCCAATAGCTAAAGGAGTAT+CGG | - | chr7.1:16931072-16931091 | MS.gene38803:intron | 40.0% |
| ! | GGGTGCAAAGAGAAATTTTC+AGG | + | chr7.1:16931253-16931272 | None:intergenic | 40.0% |
| ! | TGATGTTTCTGTGACATCCT+TGG | + | chr7.1:16930318-16930337 | None:intergenic | 40.0% |
| ! | TGGACTCCGTTTTATGTTGT+CGG | + | chr7.1:16934069-16934088 | None:intergenic | 40.0% |
| ! | TTGTGTTGACATAGAGTCAG+GGG | - | chr7.1:16931136-16931155 | MS.gene38803:intron | 40.0% |
| ! | TTTGAAATTTCAGGGTGTGC+AGG | + | chr7.1:16931190-16931209 | None:intergenic | 40.0% |
| !! | TGATATGGTTGATTTGGCAG+AGG | - | chr7.1:16932774-16932793 | MS.gene38803:intron | 40.0% |
| !!! | CAGGTTTTAACTCTATGCAG+TGG | + | chr7.1:16931982-16932001 | None:intergenic | 40.0% |
| !!! | GAATTTTTTTTGCACCCCCT+GGG | - | chr7.1:16931939-16931958 | MS.gene38803:intron | 40.0% |
| !!! | TGAATTTTTTTTGCACCCCC+TGG | - | chr7.1:16931938-16931957 | MS.gene38803:intron | 40.0% |
| ACGGCTACCGAGATTATTGA+TGG | - | chr7.1:16932239-16932258 | MS.gene38803:intron | 45.0% | |
| ACTTCTCCTTCCAGTATGCT+GGG | + | chr7.1:16931339-16931358 | None:intergenic | 45.0% | |
| AGTGAGGTTGAGGAAAGAGA+TGG | - | chr7.1:16934317-16934336 | MS.gene38803:CDS | 45.0% | |
| ATAAAACGGAGTCCAAGAGG+AGG | - | chr7.1:16934074-16934093 | MS.gene38803:intron | 45.0% | |
| ATACTGGAAGGAGAAGTGGA+AGG | - | chr7.1:16931342-16931361 | MS.gene38803:intron | 45.0% | |
| ATCCTAAGTGGTGACAACTC+AGG | - | chr7.1:16933843-16933862 | MS.gene38803:intron | 45.0% | |
| ATCGGTAACCGAGGTAGATT+CGG | - | chr7.1:16932212-16932231 | MS.gene38803:intron | 45.0% | |
| CCATCGGAAACTCCAGTATA+AGG | + | chr7.1:16930443-16930462 | None:intergenic | 45.0% | |
| CCCAAGGAATGTTGAGAAAG+AGG | - | chr7.1:16932188-16932207 | MS.gene38803:intron | 45.0% | |
| CCCTCTTTCTCAACATTCCT+TGG | + | chr7.1:16932192-16932211 | None:intergenic | 45.0% | |
| CCTTATACTGGAGTTTCCGA+TGG | - | chr7.1:16930440-16930459 | MS.gene38803:CDS | 45.0% | |
| CGAGGTAAGAAAGAGGGTAA+TGG | - | chr7.1:16930848-16930867 | MS.gene38803:intron | 45.0% | |
| CTCGTCGCCATCAATAATCT+CGG | + | chr7.1:16932249-16932268 | None:intergenic | 45.0% | |
| GCAATTAGGCTAAGTGAGGA+GGG | - | chr7.1:16934242-16934261 | MS.gene38803:CDS | 45.0% | |
| GCCGATACTCCTTTAGCTAT+TGG | + | chr7.1:16931076-16931095 | None:intergenic | 45.0% | |
| GCGGATCTATATAGAGGTGA+GGG | - | chr7.1:16931158-16931177 | MS.gene38803:intron | 45.0% | |
| GTACTAAGTTTCCCGTCTGA+AGG | + | chr7.1:16932153-16932172 | None:intergenic | 45.0% | |
| GTGTTTGTGTCTGATACCAC+TGG | + | chr7.1:16933428-16933447 | None:intergenic | 45.0% | |
| GTTTCTGTGACATCCTTGGA+TGG | + | chr7.1:16930314-16930333 | None:intergenic | 45.0% | |
| TAAAACGGAGTCCAAGAGGA+GGG | - | chr7.1:16934075-16934094 | MS.gene38803:intron | 45.0% | |
| TATAAGGTCCTTCACCGTGA+GGG | + | chr7.1:16930427-16930446 | None:intergenic | 45.0% | |
| TCCTAAGTGGTGACAACTCA+GGG | - | chr7.1:16933844-16933863 | MS.gene38803:intron | 45.0% | |
| TCCTTGGATAGGAAAAGGGT+TGG | - | chr7.1:16934154-16934173 | MS.gene38803:CDS | 45.0% | |
| TGAATCGTAACCCAGCATAC+TGG | - | chr7.1:16931326-16931345 | MS.gene38803:intron | 45.0% | |
| TGAGGTCAGCCAATAGCTAA+AGG | - | chr7.1:16931064-16931083 | MS.gene38803:intron | 45.0% | |
| TGCAGCAGAAGAACAACCTT+TGG | - | chr7.1:16932983-16933002 | MS.gene38803:intron | 45.0% | |
| TTGTGCTTCAACGTAGCATC+TGG | - | chr7.1:16932879-16932898 | MS.gene38803:intron | 45.0% | |
| ! | ACCAACCCTTTTCCTATCCA+AGG | + | chr7.1:16934158-16934177 | None:intergenic | 45.0% |
| ! | CTAGTTGTTATTGAGCCCAC+TGG | - | chr7.1:16932933-16932952 | MS.gene38803:intron | 45.0% |
| ! | GATGATGATGAAGAGTGTGG+AGG | - | chr7.1:16932804-16932823 | MS.gene38803:intron | 45.0% |
| ! | GGACTCCGTTTTATGTTGTC+GGG | + | chr7.1:16934068-16934087 | None:intergenic | 45.0% |
| ! | TGGCAGTTTTCATGACTGCA+TGG | - | chr7.1:16930264-16930283 | MS.gene38803:CDS | 45.0% |
| ! | TTTCTAGCAATGCCACCAGT+GGG | + | chr7.1:16932951-16932970 | None:intergenic | 45.0% |
| !! | ATGTTACTTTGGGCCAAGAG+TGG | - | chr7.1:16931483-16931502 | MS.gene38803:intron | 45.0% |
| !! | GAGTATCGGCCAATAGCTAA+AGG | - | chr7.1:16931086-16931105 | MS.gene38803:intron | 45.0% |
| !! | TTTTCTAGCAATGCCACCAG+TGG | + | chr7.1:16932952-16932971 | None:intergenic | 45.0% |
| !! | AATAAATAAAAAATAAACAA+AGG | + | chr7.1:16931761-16931780 | None:intergenic | 5.0% |
| !! | ATATATATACATATATATAA+TGG | - | chr7.1:16931710-16931729 | MS.gene38803:CDS | 5.0% |
| AAGTGAGGAGGGTGATGTGT+TGG | - | chr7.1:16934253-16934272 | MS.gene38803:CDS | 50.0% | |
| ACCAGAGAAGAAGATGAGGG+AGG | - | chr7.1:16931384-16931403 | MS.gene38803:intron | 50.0% | |
| ACGTTGAAGCACAACCCAAG+TGG | + | chr7.1:16932873-16932892 | None:intergenic | 50.0% | |
| AGAGAAGAAGATGAGGGAGG+CGG | - | chr7.1:16931387-16931406 | MS.gene38803:intron | 50.0% | |
| AGAGTGTGGAGGACCATACA+AGG | - | chr7.1:16932815-16932834 | MS.gene38803:intron | 50.0% | |
| CACGGTGAAGGACCTTATAC+TGG | - | chr7.1:16930428-16930447 | MS.gene38803:CDS | 50.0% | |
| CACTTCTCCTTCCAGTATGC+TGG | + | chr7.1:16931340-16931359 | None:intergenic | 50.0% | |
| CAGCATACTGGAAGGAGAAG+TGG | - | chr7.1:16931338-16931357 | MS.gene38803:intron | 50.0% | |
| CCAAACATCGGAAACTCCGA+AGG | + | chr7.1:16930342-16930361 | None:intergenic | 50.0% | |
| CCACAACACGAGGAGTTGTT+GGG | + | chr7.1:16932116-16932135 | None:intergenic | 50.0% | |
| CCGAGGTAGATTCGGCTAAA+CGG | - | chr7.1:16932220-16932239 | MS.gene38803:intron | 50.0% | |
| CCGTTTAGCCGAATCTACCT+CGG | + | chr7.1:16932223-16932242 | None:intergenic | 50.0% | |
| CCTGTGTGGAGAAGAAGTGA+CGG | + | chr7.1:16930513-16930532 | None:intergenic | 50.0% | |
| CCTTCGGAGTTTCCGATGTT+TGG | - | chr7.1:16930339-16930358 | MS.gene38803:CDS | 50.0% | |
| CCTTGGATGGTGTAACTCCA+CGG | + | chr7.1:16930301-16930320 | None:intergenic | 50.0% | |
| CGTTGAAGCACAACCCAAGT+GGG | + | chr7.1:16932872-16932891 | None:intergenic | 50.0% | |
| GACGAAGTTCATTTCCTCGC+AGG | + | chr7.1:16932013-16932032 | None:intergenic | 50.0% | |
| GCCGTCCCAAGATAAGTGTT+AGG | + | chr7.1:16932058-16932077 | None:intergenic | 50.0% | |
| GGCAATTAGGCTAAGTGAGG+AGG | - | chr7.1:16934241-16934260 | MS.gene38803:CDS | 50.0% | |
| GGCGGATCTATATAGAGGTG+AGG | - | chr7.1:16931157-16931176 | MS.gene38803:intron | 50.0% | |
| GTATAAGGTCCTTCACCGTG+AGG | + | chr7.1:16930428-16930447 | None:intergenic | 50.0% | |
| TAAGTGGTGACAACTCAGGG+AGG | - | chr7.1:16933847-16933866 | MS.gene38803:intron | 50.0% | |
| TCAGGGGCGGATCTATATAG+AGG | - | chr7.1:16931152-16931171 | MS.gene38803:intron | 50.0% | |
| TCCACAACACGAGGAGTTGT+TGG | + | chr7.1:16932117-16932136 | None:intergenic | 50.0% | |
| TCCCTGAGTTGTCACCACTT+AGG | + | chr7.1:16933848-16933867 | None:intergenic | 50.0% | |
| TCGTAACCCAGCATACTGGA+AGG | - | chr7.1:16931330-16931349 | MS.gene38803:intron | 50.0% | |
| TCGTGTTGTGGAACCAGAGT+TGG | - | chr7.1:16932125-16932144 | MS.gene38803:intron | 50.0% | |
| TGTTGACATAGAGTCAGGGG+CGG | - | chr7.1:16931139-16931158 | MS.gene38803:intron | 50.0% | |
| ! | AACTCTGGTTCCACAACACG+AGG | + | chr7.1:16932126-16932145 | None:intergenic | 50.0% |
| ! | AGTTTTGCCTTCGACCCTCA+CGG | - | chr7.1:16930410-16930429 | MS.gene38803:CDS | 50.0% |
| ! | GAGTCCAAGAGGAGGGTTTT+GGG | - | chr7.1:16934082-16934101 | MS.gene38803:intron | 50.0% |
| ! | GTTGTTATTGAGCCCACTGG+TGG | - | chr7.1:16932936-16932955 | MS.gene38803:intron | 50.0% |
| !! | CTTCTAAAGTTGACGCCCCA+AGG | - | chr7.1:16932172-16932191 | MS.gene38803:intron | 50.0% |
| !! | GCTGAGAGTGTTAACCTGTG+TGG | + | chr7.1:16930527-16930546 | None:intergenic | 50.0% |
| AACCTGTCAGAAAGCCTGCG+AGG | - | chr7.1:16931996-16932015 | MS.gene38803:intron | 55.0% | |
| ACATATGTGGGCGCCCACTT+GGG | - | chr7.1:16932856-16932875 | MS.gene38803:intron | 55.0% | |
| CCAACCCAAAACCCTCCTCT+TGG | + | chr7.1:16934089-16934108 | None:intergenic | 55.0% | |
| CCAACGGCGCCGTATTCAAT+CGG | + | chr7.1:16930383-16930402 | None:intergenic | 55.0% | |
| CCCAACAACTCCTCGTGTTG+TGG | - | chr7.1:16932113-16932132 | MS.gene38803:intron | 55.0% | |
| CCGTCACTTCTTCTCCACAC+AGG | - | chr7.1:16930510-16930529 | MS.gene38803:CDS | 55.0% | |
| CCGTGGAGTTACACCATCCA+AGG | - | chr7.1:16930298-16930317 | MS.gene38803:CDS | 55.0% | |
| GAAAGAGGGATCGGTAACCG+AGG | - | chr7.1:16932203-16932222 | MS.gene38803:intron | 55.0% | |
| GAGGCCACAACTGCACCTTA+CGG | - | chr7.1:16930232-16930251 | MS.gene38803:CDS | 55.0% | |
| GCACCGTCATCAGAACCGTT+GGG | - | chr7.1:16930478-16930497 | MS.gene38803:CDS | 55.0% | |
| GCATGGTTAGCATACAGCCG+TGG | - | chr7.1:16930281-16930300 | MS.gene38803:CDS | 55.0% | |
| GCCTCCCTCATCTTCTTCTC+TGG | + | chr7.1:16931388-16931407 | None:intergenic | 55.0% | |
| GGCAAAACTCTCCGGTCCAA+CGG | + | chr7.1:16930399-16930418 | None:intergenic | 55.0% | |
| GGGTCGAAGGCAAAACTCTC+CGG | + | chr7.1:16930407-16930426 | None:intergenic | 55.0% | |
| GTTGGGCTCGTCAAAGCAGA+GGG | + | chr7.1:16932099-16932118 | None:intergenic | 55.0% | |
| TGACGGCAAAGTCCTCCCAA+CGG | + | chr7.1:16930496-16930515 | None:intergenic | 55.0% | |
| TGTTGGGCTCGTCAAAGCAG+AGG | + | chr7.1:16932100-16932119 | None:intergenic | 55.0% | |
| TTCCTCGCAGGCTTTCTGAC+AGG | + | chr7.1:16932001-16932020 | None:intergenic | 55.0% | |
| ! | CAGAGTTGGCTCCTTCAGAC+GGG | - | chr7.1:16932139-16932158 | MS.gene38803:intron | 55.0% |
| ! | CCAGAGTTGGCTCCTTCAGA+CGG | - | chr7.1:16932138-16932157 | MS.gene38803:intron | 55.0% |
| ! | CCTCCCAACGGTTCTGATGA+CGG | + | chr7.1:16930484-16930503 | None:intergenic | 55.0% |
| ! | GGAGTCCAAGAGGAGGGTTT+TGG | - | chr7.1:16934081-16934100 | MS.gene38803:intron | 55.0% |
| !! | GAACCAGGTAGTTGGCCTTG+CGG | - | chr7.1:16932317-16932336 | MS.gene38803:intron | 55.0% |
| !!! | CCAAGAGGAGGGTTTTGGGT+TGG | - | chr7.1:16934086-16934105 | MS.gene38803:intron | 55.0% |
| CACATATGTGGGCGCCCACT+TGG | - | chr7.1:16932855-16932874 | MS.gene38803:intron | 60.0% | |
| CCGATTGAATACGGCGCCGT+TGG | - | chr7.1:16930380-16930399 | MS.gene38803:CDS | 60.0% | |
| CCGTCATCAGAACCGTTGGG+AGG | - | chr7.1:16930481-16930500 | MS.gene38803:CDS | 60.0% | |
| CCGTCTGAAGGAGCCAACTC+TGG | + | chr7.1:16932141-16932160 | None:intergenic | 60.0% | |
| CTCTATGCAGTGGCGTGTCC+AGG | + | chr7.1:16931972-16931991 | None:intergenic | 60.0% | |
| GCCACAACTGCACCTTACGG+CGG | - | chr7.1:16930235-16930254 | MS.gene38803:CDS | 60.0% | |
| GGCACCGTCATCAGAACCGT+TGG | - | chr7.1:16930477-16930496 | MS.gene38803:CDS | 60.0% | |
| TAGCCGCAAGGCCAACTACC+TGG | + | chr7.1:16932323-16932342 | None:intergenic | 60.0% | |
| TCCTTCACCGTGAGGGTCGA+AGG | + | chr7.1:16930420-16930439 | None:intergenic | 60.0% | |
| TGAATACGGCGCCGTTGGAC+CGG | - | chr7.1:16930385-16930404 | MS.gene38803:CDS | 60.0% | |
| ! | TTTTTGCACCCCCTGGGCCA+GGG | - | chr7.1:16931945-16931964 | MS.gene38803:intron | 60.0% |
| !!! | TTTTTTGCACCCCCTGGGCC+AGG | - | chr7.1:16931944-16931963 | MS.gene38803:intron | 60.0% |
| GCCGCCGTAAGGTGCAGTTG+TGG | + | chr7.1:16930239-16930258 | None:intergenic | 65.0% | |
| GCCTTCGACCCTCACGGTGA+AGG | - | chr7.1:16930416-16930435 | MS.gene38803:CDS | 65.0% | |
| CAGTGGCGTGTCCAGGACCC+TGG | + | chr7.1:16931965-16931984 | None:intergenic | 70.0% | |
| CTGCCACGACAGCCGCCGTA+AGG | + | chr7.1:16930250-16930269 | None:intergenic | 70.0% | |
| GCACCTTACGGCGGCTGTCG+TGG | - | chr7.1:16930244-16930263 | MS.gene38803:CDS | 70.0% | |
| GTGTCCAGGACCCTGGCCCA+GGG | + | chr7.1:16931958-16931977 | None:intergenic | 70.0% | |
| TGTCCAGGACCCTGGCCCAG+GGG | + | chr7.1:16931957-16931976 | None:intergenic | 70.0% | |
| CGTGTCCAGGACCCTGGCCC+AGG | + | chr7.1:16931959-16931978 | None:intergenic | 75.0% | |
| GTCCAGGACCCTGGCCCAGG+GGG | + | chr7.1:16931956-16931975 | None:intergenic | 75.0% | |
| ! | CACCCCCTGGGCCAGGGTCC+TGG | - | chr7.1:16931951-16931970 | MS.gene38803:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16930230 | 16934415 | 16930230 | ID=MS.gene38803 |
| chr7.1 | mRNA | 16930230 | 16934415 | 16930230 | ID=MS.gene38803.t1;Parent=MS.gene38803 |
| chr7.1 | exon | 16934114 | 16934415 | 16934114 | ID=MS.gene38803.t1.exon1;Parent=MS.gene38803.t1 |
| chr7.1 | CDS | 16934114 | 16934415 | 16934114 | ID=cds.MS.gene38803.t1;Parent=MS.gene38803.t1 |
| chr7.1 | exon | 16931561 | 16931851 | 16931561 | ID=MS.gene38803.t1.exon2;Parent=MS.gene38803.t1 |
| chr7.1 | CDS | 16931561 | 16931851 | 16931561 | ID=cds.MS.gene38803.t1;Parent=MS.gene38803.t1 |
| chr7.1 | exon | 16930230 | 16930818 | 16930230 | ID=MS.gene38803.t1.exon3;Parent=MS.gene38803.t1 |
| chr7.1 | CDS | 16930230 | 16930818 | 16930230 | ID=cds.MS.gene38803.t1;Parent=MS.gene38803.t1 |
| Gene Sequence |
| Protein sequence |
