Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38824.t1 | RHN47770.1 | 92.4 | 419 | 31 | 1 | 1 | 418 | 6 | 424 | 1.50E-227 | 798.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38824.t1 | Q9SLG8 | 53.8 | 338 | 137 | 9 | 80 | 409 | 48 | 374 | 8.5e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38824.t1 | A0A396H3D3 | 92.4 | 419 | 31 | 1 | 1 | 418 | 6 | 424 | 1.1e-227 | 798.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050670 | MS.gene38824 | 0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene05105 | MS.gene38824 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene38824 | 0.804546 | 2.05E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene38824 | 0.827157 | 1.83E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene38824 | 0.80091 | 1.15E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 110 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGAGATGGAGTATTA+TGG | 0.214695 | 7.1:-16918202 | MS.gene38824:CDS |
| CCACATATGTGTTCTTTCTT+TGG | 0.231810 | 7.1:+16919686 | None:intergenic |
| ACTTCCAATGTTCCAGCTTT+AGG | 0.237744 | 7.1:+16918509 | None:intergenic |
| CCGATTGAAGATAGAGTTAT+AGG | 0.254119 | 7.1:+16922323 | None:intergenic |
| CCTTCGGAGTTTCCGATGTT+TGG | 0.289970 | 7.1:-16922190 | MS.gene38824:CDS |
| GGAGTCCAAGAGGAGGGTTT+TGG | 0.319896 | 7.1:-16918448 | MS.gene38824:CDS |
| TTCTTTGGATGCTCCTTGTA+TGG | 0.320582 | 7.1:+16919701 | None:intergenic |
| CTACAAAATGTAGAATATTA+AGG | 0.335376 | 7.1:-16918547 | MS.gene38824:CDS |
| GGAAAGAGATGGAGTATTAT+GGG | 0.336513 | 7.1:-16918201 | MS.gene38824:CDS |
| GGAGTACTGGATTGGCAATT+AGG | 0.337863 | 7.1:-16918301 | MS.gene38824:CDS |
| AATGTAGAATATTAAGGTAT+TGG | 0.356659 | 7.1:-16918541 | MS.gene38824:CDS |
| TTTGGCTTTCACAAACAGTT+TGG | 0.368869 | 7.1:-16919528 | MS.gene38824:CDS |
| CACATATGTGGGCGCCCACT+TGG | 0.369191 | 7.1:-16919674 | MS.gene38824:CDS |
| CAGCACAAAACAAGAGAGTT+TGG | 0.407280 | 7.1:-16922375 | MS.gene38824:CDS |
| CACGGTGAAGGACCTTATAC+TGG | 0.415839 | 7.1:-16922101 | MS.gene38824:CDS |
| CCATCGGAAACTCCAGTATA+AGG | 0.420556 | 7.1:+16922089 | None:intergenic |
| AAATATCCTTGGATAGGAAA+AGG | 0.423941 | 7.1:-16918380 | MS.gene38824:CDS |
| TTGGATATTGATCAACGAAC+TGG | 0.446101 | 7.1:-16919509 | MS.gene38824:CDS |
| TCTCTCATATTTAGAACTGC+TGG | 0.447647 | 7.1:+16919469 | None:intergenic |
| TGATGTTTCTGTGACATCCT+TGG | 0.456615 | 7.1:+16922214 | None:intergenic |
| AACAATCTCACATTTGCAAA+TGG | 0.458350 | 7.1:-16918614 | MS.gene38824:CDS |
| TGCAGCAGAAGAACAACCTT+TGG | 0.462301 | 7.1:-16919546 | MS.gene38824:CDS |
| TTGTGCTTCAACGTAGCATC+TGG | 0.463806 | 7.1:-16919650 | MS.gene38824:CDS |
| CATATTTGGCTAAGGTGAAA+GGG | 0.464547 | 7.1:-16918322 | MS.gene38824:CDS |
| AACACCTAAAGCTGGAACAT+TGG | 0.466304 | 7.1:-16918513 | MS.gene38824:CDS |
| ATCATAGAAGTGGTAATAGA+AGG | 0.466599 | 7.1:-16918241 | MS.gene38824:CDS |
| AATGGATGCTAAAATATCCT+TGG | 0.469758 | 7.1:-16918391 | MS.gene38824:CDS |
| AACTTATTCATATTTGGCTA+AGG | 0.473266 | 7.1:-16918330 | MS.gene38824:CDS |
| TGAATACGGCGCCGTTGGAC+CGG | 0.480181 | 7.1:-16922144 | MS.gene38824:CDS |
| TACTTGTCTTTGATCCTAAG+TGG | 0.481110 | 7.1:-16918698 | MS.gene38824:CDS |
| TTATGTTGCTGACGCATACA+TGG | 0.486166 | 7.1:-16919621 | MS.gene38824:CDS |
| CCTATAACTCTATCTTCAAT+CGG | 0.486388 | 7.1:-16922323 | MS.gene38824:CDS |
| CGATTGAAGATAGAGTTATA+GGG | 0.486908 | 7.1:+16922324 | None:intergenic |
| TCATATTTGGCTAAGGTGAA+AGG | 0.488191 | 7.1:-16918323 | MS.gene38824:CDS |
| TTGTTATACTTAATAACAAA+AGG | 0.490638 | 7.1:+16918161 | None:intergenic |
| AGTGAGGTTGAGGAAAGAGA+TGG | 0.492716 | 7.1:-16918212 | MS.gene38824:CDS |
| CCAACCCAAAACCCTCCTCT+TGG | 0.502263 | 7.1:+16918443 | None:intergenic |
| TCCTTCACCGTGAGGGTCGA+AGG | 0.502621 | 7.1:+16922112 | None:intergenic |
| AATATCCTTGGATAGGAAAA+GGG | 0.503384 | 7.1:-16918379 | MS.gene38824:CDS |
| GCTAAGGTGAAAGGGAGTAC+TGG | 0.506609 | 7.1:-16918314 | MS.gene38824:CDS |
| CCGATTGAATACGGCGCCGT+TGG | 0.512132 | 7.1:-16922149 | MS.gene38824:CDS |
| GCACCTTACGGCGGCTGTCG+TGG | 0.513010 | 7.1:-16922285 | MS.gene38824:CDS |
| AATATGATTCCGATTGAATA+CGG | 0.514073 | 7.1:-16922158 | MS.gene38824:CDS |
| CCGATGGACATATCATCAAA+TGG | 0.514459 | 7.1:-16922073 | MS.gene38824:CDS |
| GCCTTCGACCCTCACGGTGA+AGG | 0.515139 | 7.1:-16922113 | MS.gene38824:CDS |
| GGGTCGAAGGCAAAACTCTC+CGG | 0.516696 | 7.1:+16922125 | None:intergenic |
| CTAGTTGTTATTGAGCCCAC+TGG | 0.517702 | 7.1:-16919596 | MS.gene38824:CDS |
| GGCACCGTCATCAGAACCGT+TGG | 0.520639 | 7.1:-16922052 | MS.gene38824:CDS |
| CCAACGGCGCCGTATTCAAT+CGG | 0.522160 | 7.1:+16922149 | None:intergenic |
| AAGGTCTATTAGTGAGGTTG+AGG | 0.522210 | 7.1:-16918222 | MS.gene38824:CDS |
| AGAGATGGAGTATTATGGGT+TGG | 0.527512 | 7.1:-16918197 | MS.gene38824:CDS |
| CTGCCACGACAGCCGCCGTA+AGG | 0.527552 | 7.1:+16922282 | None:intergenic |
| GAAGTCTTTGCTAATCTACC+AGG | 0.529415 | 7.1:-16918491 | MS.gene38824:CDS |
| ATGCTAAAATATCCTTGGAT+AGG | 0.532866 | 7.1:-16918386 | MS.gene38824:CDS |
| ACATATGTGGGCGCCCACTT+GGG | 0.533191 | 7.1:-16919673 | MS.gene38824:CDS |
| GTCACAGAAACATCAACCTT+CGG | 0.533655 | 7.1:-16922206 | MS.gene38824:CDS |
| ATCCTAAGTGGTGACAACTC+AGG | 0.535623 | 7.1:-16918686 | MS.gene38824:CDS |
| TTTATGTTGTCGGGAAAACC+TGG | 0.539609 | 7.1:+16918473 | None:intergenic |
| CCAAAGAAAGAACACATATG+TGG | 0.541865 | 7.1:-16919686 | MS.gene38824:CDS |
| GGCAAAACTCTCCGGTCCAA+CGG | 0.542787 | 7.1:+16922133 | None:intergenic |
| TCCTAAGTGGTGACAACTCA+GGG | 0.544685 | 7.1:-16918685 | MS.gene38824:CDS |
| GGCAATTAGGCTAAGTGAGG+AGG | 0.546325 | 7.1:-16918288 | MS.gene38824:CDS |
| GGTGAAAGGGAGTACTGGAT+TGG | 0.549277 | 7.1:-16918309 | MS.gene38824:CDS |
| AAGTGAGGAGGGTGATGTGT+TGG | 0.550992 | 7.1:-16918276 | MS.gene38824:CDS |
| TGGTTAGAAACACCTAAAGC+TGG | 0.557207 | 7.1:-16918521 | MS.gene38824:CDS |
| GAGGCCACAACTGCACCTTA+CGG | 0.558237 | 7.1:-16922297 | MS.gene38824:CDS |
| GCACCGTCATCAGAACCGTT+GGG | 0.561995 | 7.1:-16922051 | MS.gene38824:CDS |
| AGAGTGTGGAGGACCATACA+AGG | 0.571122 | 7.1:-16919714 | MS.gene38824:CDS |
| ATGCGTCAGCAACATAAAGT+TGG | 0.571537 | 7.1:+16919627 | None:intergenic |
| GTTTCTGTGACATCCTTGGA+TGG | 0.573578 | 7.1:+16922218 | None:intergenic |
| CCTCCCAACGGTTCTGATGA+CGG | 0.575799 | 7.1:+16922048 | None:intergenic |
| CCTTATACTGGAGTTTCCGA+TGG | 0.576811 | 7.1:-16922089 | MS.gene38824:CDS |
| TCCTTGGATAGGAAAAGGGT+TGG | 0.581523 | 7.1:-16918375 | MS.gene38824:CDS |
| CTCTATCTTCAATCGGCATG+AGG | 0.582373 | 7.1:-16922316 | MS.gene38824:CDS |
| ATTAAGTATAACAACTCTTG+TGG | 0.583196 | 7.1:-16918152 | MS.gene38824:CDS |
| AAACTGTTTGTGAAAGCCAA+AGG | 0.587101 | 7.1:+16919530 | None:intergenic |
| GCAGTTCTAAATATGAGAGA+AGG | 0.590598 | 7.1:-16919466 | MS.gene38824:intron |
| TTTCTAGCAATGCCACCAGT+GGG | 0.590642 | 7.1:+16919581 | None:intergenic |
| CCATTTGATGATATGTCCAT+CGG | 0.596449 | 7.1:+16922073 | None:intergenic |
| GCCGCCGTAAGGTGCAGTTG+TGG | 0.597374 | 7.1:+16922293 | None:intergenic |
| TATGTTGCTGACGCATACAT+GGG | 0.600191 | 7.1:-16919620 | MS.gene38824:CDS |
| GATGATGATGATGAAGAGTG+TGG | 0.601295 | 7.1:-16919728 | MS.gene38824:CDS |
| CAAAGAAAGAACACATATGT+GGG | 0.603235 | 7.1:-16919685 | MS.gene38824:CDS |
| TCCCTGAGTTGTCACCACTT+AGG | 0.607006 | 7.1:+16918684 | None:intergenic |
| AGTTTGGTGCACAATATACC+TGG | 0.610242 | 7.1:-16922359 | MS.gene38824:CDS |
| CCGTGGAGTTACACCATCCA+AGG | 0.614288 | 7.1:-16922231 | MS.gene38824:CDS |
| GCAATTAGGCTAAGTGAGGA+GGG | 0.616806 | 7.1:-16918287 | MS.gene38824:CDS |
| CTCATATTTAGAACTGCTGG+AGG | 0.621135 | 7.1:+16919472 | None:intergenic |
| CCAAACATCGGAAACTCCGA+AGG | 0.621719 | 7.1:+16922190 | None:intergenic |
| TATAAGGTCCTTCACCGTGA+GGG | 0.624280 | 7.1:+16922105 | None:intergenic |
| AACATAAAACGGAGTCCAAG+AGG | 0.625086 | 7.1:-16918458 | MS.gene38824:CDS |
| CCTTGGATGGTGTAACTCCA+CGG | 0.625278 | 7.1:+16922231 | None:intergenic |
| CCGTCACTTCTTCTCCACAC+AGG | 0.627944 | 7.1:-16922019 | MS.gene38824:intron |
| TAATAGAAGGTCTATTAGTG+AGG | 0.628030 | 7.1:-16918228 | MS.gene38824:CDS |
| CGTTGAAGCACAACCCAAGT+GGG | 0.630882 | 7.1:+16919660 | None:intergenic |
| GTTGTTATTGAGCCCACTGG+TGG | 0.642085 | 7.1:-16919593 | MS.gene38824:CDS |
| TAAAACGGAGTCCAAGAGGA+GGG | 0.660053 | 7.1:-16918454 | MS.gene38824:CDS |
| ACGTTGAAGCACAACCCAAG+TGG | 0.670983 | 7.1:+16919659 | None:intergenic |
| CCGTCATCAGAACCGTTGGG+AGG | 0.672156 | 7.1:-16922048 | MS.gene38824:CDS |
| GCCACAACTGCACCTTACGG+CGG | 0.672386 | 7.1:-16922294 | MS.gene38824:CDS |
| ATAAAACGGAGTCCAAGAGG+AGG | 0.675619 | 7.1:-16918455 | MS.gene38824:CDS |
| CCTGTGTGGAGAAGAAGTGA+CGG | 0.679020 | 7.1:+16922019 | None:intergenic |
| ATTGGCAATTAGGCTAAGTG+AGG | 0.684553 | 7.1:-16918291 | MS.gene38824:CDS |
| GTATAAGGTCCTTCACCGTG+AGG | 0.685002 | 7.1:+16922104 | None:intergenic |
| ATTCTCGTATTGCCAAACAT+CGG | 0.691641 | 7.1:+16922178 | None:intergenic |
| GCATGGTTAGCATACAGCCG+TGG | 0.695844 | 7.1:-16922248 | MS.gene38824:CDS |
| GCTGAGAGTGTTAACCTGTG+TGG | 0.698613 | 7.1:+16922005 | None:intergenic |
| TGACGGCAAAGTCCTCCCAA+CGG | 0.704429 | 7.1:+16922036 | None:intergenic |
| GATGATGATGAAGAGTGTGG+AGG | 0.746405 | 7.1:-16919725 | MS.gene38824:CDS |
| TAAGTGGTGACAACTCAGGG+AGG | 0.758730 | 7.1:-16918682 | MS.gene38824:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAAGGTAATT+TGG | + | chr7.1:16921598-16921617 | None:intergenic | 10.0% |
| !! | AAAATATTAAAATTGGAAAA+TGG | + | chr7.1:16920418-16920437 | None:intergenic | 10.0% |
| !! | AATATGCAAAAAAATTAAAA+AGG | + | chr7.1:16921606-16921625 | None:intergenic | 10.0% |
| !! | ATGTAAAAATAAAGAAAAAG+AGG | + | chr7.1:16921661-16921680 | None:intergenic | 15.0% |
| !! | CTTTATATAAAAATACTACA+TGG | + | chr7.1:16920585-16920604 | None:intergenic | 15.0% |
| !! | GCGATTAAAAATATTAAAAT+TGG | + | chr7.1:16920425-16920444 | None:intergenic | 15.0% |
| !! | TTGTTATACTTAATAACAAA+AGG | + | chr7.1:16922353-16922372 | None:intergenic | 15.0% |
| !!! | AGTATTTTTAAAAACATGAA+TGG | - | chr7.1:16920327-16920346 | MS.gene38824:intron | 15.0% |
| !!! | GAATTATACGTATATTATTT+TGG | + | chr7.1:16919810-16919829 | None:intergenic | 15.0% |
| !!! | TTAATATTTTTAATCGCAAT+TGG | - | chr7.1:16920428-16920447 | MS.gene38824:intron | 15.0% |
| !!! | TTGATCTAAAATTAGAAAAT+TGG | + | chr7.1:16919785-16919804 | None:intergenic | 15.0% |
| !! | AATGTAGAATATTAAGGTAT+TGG | - | chr7.1:16921970-16921989 | MS.gene38824:intron | 20.0% |
| !! | ATACATATATATAATGGTGT+AGG | - | chr7.1:16919698-16919717 | MS.gene38824:CDS | 20.0% |
| !! | ATGGAGAATAGTTATTATTA+TGG | - | chr7.1:16919586-16919605 | MS.gene38824:CDS | 20.0% |
| !! | CACAAAAACTTATTCATATT+TGG | - | chr7.1:16922175-16922194 | MS.gene38824:CDS | 20.0% |
| !! | CTACAAAATGTAGAATATTA+AGG | - | chr7.1:16921964-16921983 | MS.gene38824:intron | 20.0% |
| !! | TAAAGCTTCATATAACTTTA+AGG | + | chr7.1:16921732-16921751 | None:intergenic | 20.0% |
| !! | TAAATATGCATACCAATATA+TGG | - | chr7.1:16921378-16921397 | MS.gene38824:intron | 20.0% |
| !! | TACTACTATATATTAGTGTA+GGG | - | chr7.1:16919659-16919678 | MS.gene38824:CDS | 20.0% |
| !! | TCTTCATTAAAATGTATTCA+AGG | - | chr7.1:16918697-16918716 | MS.gene38824:CDS | 20.0% |
| !! | TGTACTACATTAATTCTTAT+AGG | - | chr7.1:16918610-16918629 | MS.gene38824:CDS | 20.0% |
| !! | TTACTACTATATATTAGTGT+AGG | - | chr7.1:16919658-16919677 | MS.gene38824:CDS | 20.0% |
| !! | TTGACTTTAAATTTGAATGT+AGG | + | chr7.1:16921308-16921327 | None:intergenic | 20.0% |
| !!! | ATCATTTTATTCCATAGTAA+AGG | - | chr7.1:16921635-16921654 | MS.gene38824:intron | 20.0% |
| !!! | CTTTTGGATAAATTAAAAGA+TGG | - | chr7.1:16919567-16919586 | MS.gene38824:CDS | 20.0% |
| !!! | GTTTTATATTTTAATGAACC+AGG | - | chr7.1:16920284-16920303 | MS.gene38824:intron | 20.0% |
| !!! | TAGTATATATTAATGGATGA+TGG | - | chr7.1:16918639-16918658 | MS.gene38824:CDS | 20.0% |
| !!! | TTTTGTATGTATCTTATTCA+TGG | - | chr7.1:16919431-16919450 | MS.gene38824:intron | 20.0% |
| ! | AAAATAGTACCGTTGTTTAA+CGG | + | chr7.1:16921517-16921536 | None:intergenic | 25.0% |
| ! | AACTTATTCATATTTGGCTA+AGG | - | chr7.1:16922181-16922200 | MS.gene38824:CDS | 25.0% |
| ! | AATAAGATGAGATGAACAAT+TGG | + | chr7.1:16920721-16920740 | None:intergenic | 25.0% |
| ! | AATATGATTCCGATTGAATA+CGG | - | chr7.1:16918353-16918372 | MS.gene38824:CDS | 25.0% |
| ! | AATGCTTATAAGTTACATAC+GGG | + | chr7.1:16919518-16919537 | None:intergenic | 25.0% |
| ! | ATGAATGTATCAAATCACTT+TGG | - | chr7.1:16918803-16918822 | MS.gene38824:intron | 25.0% |
| ! | ATGTTGTTCATCTATTAACA+AGG | + | chr7.1:16920498-16920517 | None:intergenic | 25.0% |
| ! | ATTAAGTATAACAACTCTTG+TGG | - | chr7.1:16922359-16922378 | MS.gene38824:CDS | 25.0% |
| ! | CATTAAAATGTATTCAAGGA+GGG | - | chr7.1:16918701-16918720 | MS.gene38824:CDS | 25.0% |
| ! | CTACATTAATTCTTATAGGA+TGG | - | chr7.1:16918614-16918633 | MS.gene38824:CDS | 25.0% |
| ! | GAAGAGAAAAATTTATCCAA+TGG | - | chr7.1:16922102-16922121 | MS.gene38824:CDS | 25.0% |
| ! | GAATGCTTATAAGTTACATA+CGG | + | chr7.1:16919519-16919538 | None:intergenic | 25.0% |
| ! | GATTAATAACCGTTAAACAA+CGG | - | chr7.1:16921505-16921524 | MS.gene38824:intron | 25.0% |
| ! | GTTTATCAAACTTGTAACTT+TGG | + | chr7.1:16918965-16918984 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTATTCAAGG+AGG | - | chr7.1:16918700-16918719 | MS.gene38824:CDS | 25.0% |
| ! | TGCAAAGTGCAATAAATATA+AGG | + | chr7.1:16919209-16919228 | None:intergenic | 25.0% |
| ! | TGTATATTCATATTAGTCGT+GGG | + | chr7.1:16918987-16919006 | None:intergenic | 25.0% |
| ! | TGTTGTTCATCTATTAACAA+GGG | + | chr7.1:16920497-16920516 | None:intergenic | 25.0% |
| !! | ATTTGACAAAAGTTCTCTTT+TGG | - | chr7.1:16919551-16919570 | MS.gene38824:CDS | 25.0% |
| !! | GAATAAGTTTTTGTGTCTAA+AGG | + | chr7.1:16922170-16922189 | None:intergenic | 25.0% |
| !! | GTAACTTATAAGCATTCTTT+TGG | - | chr7.1:16919522-16919541 | MS.gene38824:CDS | 25.0% |
| !! | TGTAAAAGTGGTTTATGTTT+TGG | - | chr7.1:16921208-16921227 | MS.gene38824:intron | 25.0% |
| !!! | AATTGAGTTGAATGTAAAAG+TGG | - | chr7.1:16921196-16921215 | MS.gene38824:intron | 25.0% |
| !!! | ATTTTTGAAGATCATAGAAG+TGG | - | chr7.1:16922260-16922279 | MS.gene38824:CDS | 25.0% |
| !!! | GATGGACTAGTATATATTAA+TGG | - | chr7.1:16918632-16918651 | MS.gene38824:CDS | 25.0% |
| !!! | GTGCAAATTTTGAAATTTCA+GGG | + | chr7.1:16919180-16919199 | None:intergenic | 25.0% |
| !!! | GTTGTGAAATAAAGTTGATA+TGG | - | chr7.1:16920741-16920760 | MS.gene38824:intron | 25.0% |
| !!! | TAAAGTTGATATGGTTGATT+TGG | - | chr7.1:16920750-16920769 | MS.gene38824:intron | 25.0% |
| !!! | TGTGCAAATTTTGAAATTTC+AGG | + | chr7.1:16919181-16919200 | None:intergenic | 25.0% |
| AAAACTGAAGTAAGAAGTGA+AGG | - | chr7.1:16919285-16919304 | MS.gene38824:intron | 30.0% | |
| AAAGACCTAACACTTATCTT+GGG | - | chr7.1:16920032-16920051 | MS.gene38824:intron | 30.0% | |
| AACAATCTCACATTTGCAAA+TGG | - | chr7.1:16921897-16921916 | MS.gene38824:intron | 30.0% | |
| ACAAAACCCTAGTTAATTGT+TGG | + | chr7.1:16919417-16919436 | None:intergenic | 30.0% | |
| ACACAAACACCTTAAATAAG+GGG | - | chr7.1:16921420-16921439 | MS.gene38824:intron | 30.0% | |
| ACTCAAGATCAACATTTGTA+GGG | - | chr7.1:16920254-16920273 | MS.gene38824:intron | 30.0% | |
| AGACACAAACACCTTAAATA+AGG | - | chr7.1:16921418-16921437 | MS.gene38824:intron | 30.0% | |
| AGTGTTTAGCTATAAGTTTG+AGG | - | chr7.1:16919028-16919047 | MS.gene38824:intron | 30.0% | |
| ATCATAGAAGTGGTAATAGA+AGG | - | chr7.1:16922270-16922289 | MS.gene38824:CDS | 30.0% | |
| ATGCTTATAAGTTACATACG+GGG | + | chr7.1:16919517-16919536 | None:intergenic | 30.0% | |
| ATGTATCTTATTCATGGACT+TGG | - | chr7.1:16919437-16919456 | MS.gene38824:intron | 30.0% | |
| CAAAATACTCCTTTAGCTAT+TGG | + | chr7.1:16919080-16919099 | None:intergenic | 30.0% | |
| CAAAGAAAGAACACATATGT+GGG | - | chr7.1:16920826-16920845 | MS.gene38824:intron | 30.0% | |
| CCTATAACTCTATCTTCAAT+CGG | - | chr7.1:16918188-16918207 | MS.gene38824:CDS | 30.0% | |
| CGATTGAAGATAGAGTTATA+GGG | + | chr7.1:16918190-16918209 | None:intergenic | 30.0% | |
| GACACAAACACCTTAAATAA+GGG | - | chr7.1:16921419-16921438 | MS.gene38824:intron | 30.0% | |
| GATAATAGGTTCTTTCACTA+TGG | - | chr7.1:16920354-16920373 | MS.gene38824:intron | 30.0% | |
| GCAAGATGTTCAATAAAAGA+CGG | - | chr7.1:16920450-16920469 | MS.gene38824:intron | 30.0% | |
| GTGTATATTCATATTAGTCG+TGG | + | chr7.1:16918988-16919007 | None:intergenic | 30.0% | |
| TAAAGACCTAACACTTATCT+TGG | - | chr7.1:16920031-16920050 | MS.gene38824:intron | 30.0% | |
| TAATAGAAGGTCTATTAGTG+AGG | - | chr7.1:16922283-16922302 | MS.gene38824:CDS | 30.0% | |
| TACTCAAGATCAACATTTGT+AGG | - | chr7.1:16920253-16920272 | MS.gene38824:intron | 30.0% | |
| TGTATCTTATTCATGGACTT+GGG | - | chr7.1:16919438-16919457 | MS.gene38824:intron | 30.0% | |
| TTTAATGAAGAGAAGCTTTC+TGG | + | chr7.1:16918688-16918707 | None:intergenic | 30.0% | |
| ! | AACACATTTTGCATGAACAA+AGG | + | chr7.1:16918572-16918591 | None:intergenic | 30.0% |
| ! | ATGAAGTGTCCTATCAAATT+AGG | - | chr7.1:16920389-16920408 | MS.gene38824:intron | 30.0% |
| ! | GATTAGCCAACAATTAACTA+GGG | - | chr7.1:16919408-16919427 | MS.gene38824:intron | 30.0% |
| ! | TGATTAGCCAACAATTAACT+AGG | - | chr7.1:16919407-16919426 | MS.gene38824:intron | 30.0% |
| ! | TGCATATTTAACTTCACTCT+TGG | + | chr7.1:16921368-16921387 | None:intergenic | 30.0% |
| !! | ATTTTAATGAACCAGGTAGT+TGG | - | chr7.1:16920291-16920310 | MS.gene38824:intron | 30.0% |
| !!! | ACATTGACTTGTTCACTTTT+TGG | + | chr7.1:16921870-16921889 | None:intergenic | 30.0% |
| AAACTGTTTGTGAAAGCCAA+AGG | + | chr7.1:16920984-16921003 | None:intergenic | 35.0% | |
| AAATGGTCGCCTAATTTGAT+AGG | + | chr7.1:16920401-16920420 | None:intergenic | 35.0% | |
| AACACCTTAAATAAGGGGTT+AGG | - | chr7.1:16921425-16921444 | MS.gene38824:intron | 35.0% | |
| AACTTCGTCACTAACACTAA+TGG | - | chr7.1:16920006-16920025 | MS.gene38824:intron | 35.0% | |
| ACATGAATGGAGCTGATAAT+AGG | - | chr7.1:16920340-16920359 | MS.gene38824:intron | 35.0% | |
| AGAAAAAGAGGCCTTTACTA+TGG | + | chr7.1:16921649-16921668 | None:intergenic | 35.0% | |
| AGATAGTGTGTCAAAGAAAG+AGG | + | chr7.1:16918531-16918550 | None:intergenic | 35.0% | |
| AGGACACTTCATTGTTAGTA+AGG | + | chr7.1:16920381-16920400 | None:intergenic | 35.0% | |
| ATTCTCGTATTGCCAAACAT+CGG | + | chr7.1:16918336-16918355 | None:intergenic | 35.0% | |
| CAACTGAATTTGAATTCCGT+TGG | - | chr7.1:16918884-16918903 | MS.gene38824:intron | 35.0% | |
| CACTGGAATCAACCATATAT+TGG | + | chr7.1:16921393-16921412 | None:intergenic | 35.0% | |
| CATATTTGGCTAAGGTGAAA+GGG | - | chr7.1:16922189-16922208 | MS.gene38824:CDS | 35.0% | |
| CCAAAGAAAGAACACATATG+TGG | - | chr7.1:16920825-16920844 | MS.gene38824:intron | 35.0% | |
| CCACATATGTGTTCTTTCTT+TGG | + | chr7.1:16920828-16920847 | None:intergenic | 35.0% | |
| CCGATTGAAGATAGAGTTAT+AGG | + | chr7.1:16918191-16918210 | None:intergenic | 35.0% | |
| TAAAAATACTAGTAGCCGCA+AGG | + | chr7.1:16920317-16920336 | None:intergenic | 35.0% | |
| TACTTGTCTTTGATCCTAAG+TGG | - | chr7.1:16921813-16921832 | MS.gene38824:intron | 35.0% | |
| TCAAATCACTTTGGTAAACG+AGG | - | chr7.1:16918812-16918831 | MS.gene38824:intron | 35.0% | |
| TCATATTTGGCTAAGGTGAA+AGG | - | chr7.1:16922188-16922207 | MS.gene38824:CDS | 35.0% | |
| TGTAACAGAATAGTGAACCA+CGG | + | chr7.1:16919256-16919275 | None:intergenic | 35.0% | |
| TTGGATATTGATCAACGAAC+TGG | - | chr7.1:16921002-16921021 | MS.gene38824:intron | 35.0% | |
| ! | AACTCCTAACCCCTTATTTA+AGG | + | chr7.1:16921432-16921451 | None:intergenic | 35.0% |
| ! | ACTTGGGTCAAATGTTACTT+TGG | - | chr7.1:16919454-16919473 | MS.gene38824:intron | 35.0% |
| ! | AGGAAAGAGATGGAGTATTA+TGG | - | chr7.1:16922309-16922328 | MS.gene38824:CDS | 35.0% |
| ! | ATAGGGTAGAATTTTGAACC+AGG | + | chr7.1:16918173-16918192 | None:intergenic | 35.0% |
| ! | CAATATATGGTTGATTCCAG+TGG | - | chr7.1:16921391-16921410 | MS.gene38824:intron | 35.0% |
| ! | CCATTTGATGATATGTCCAT+CGG | + | chr7.1:16918441-16918460 | None:intergenic | 35.0% |
| ! | GGAAAGAGATGGAGTATTAT+GGG | - | chr7.1:16922310-16922329 | MS.gene38824:CDS | 35.0% |
| ! | GGTGCAAAGAGAAATTTTCA+GGG | + | chr7.1:16919234-16919253 | None:intergenic | 35.0% |
| ! | GTTTTCCCGACAACATAAAA+CGG | - | chr7.1:16922042-16922061 | MS.gene38824:CDS | 35.0% |
| ! | TCAACACAAGTTGAGTTTGT+TGG | + | chr7.1:16919107-16919126 | None:intergenic | 35.0% |
| ! | TCTCTCATATTTAGAACTGC+TGG | + | chr7.1:16921045-16921064 | None:intergenic | 35.0% |
| !! | CTTGGGTCAAATGTTACTTT+GGG | - | chr7.1:16919455-16919474 | MS.gene38824:intron | 35.0% |
| !! | GCAGTTCTAAATATGAGAGA+AGG | - | chr7.1:16921045-16921064 | MS.gene38824:intron | 35.0% |
| !! | TTTGGCTTTCACAAACAGTT+TGG | - | chr7.1:16920983-16921002 | MS.gene38824:intron | 35.0% |
| AAAATTTCTCTTTGCACCCG+TGG | - | chr7.1:16919236-16919255 | MS.gene38824:intron | 40.0% | |
| AAATGTATTCAAGGAGGGTC+AGG | - | chr7.1:16918706-16918725 | MS.gene38824:intron | 40.0% | |
| AACACCTAAAGCTGGAACAT+TGG | - | chr7.1:16921998-16922017 | MS.gene38824:intron | 40.0% | |
| AACATAAAACGGAGTCCAAG+AGG | - | chr7.1:16922053-16922072 | MS.gene38824:CDS | 40.0% | |
| AAGGTCTATTAGTGAGGTTG+AGG | - | chr7.1:16922289-16922308 | MS.gene38824:CDS | 40.0% | |
| AATGTATTCAAGGAGGGTCA+GGG | - | chr7.1:16918707-16918726 | MS.gene38824:intron | 40.0% | |
| ACCTAACACTTATCTTGGGA+CGG | - | chr7.1:16920036-16920055 | MS.gene38824:intron | 40.0% | |
| ACTTCCAATGTTCCAGCTTT+AGG | + | chr7.1:16922005-16922024 | None:intergenic | 40.0% | |
| ATGAACCAGAGAAGAAGATG+AGG | - | chr7.1:16919362-16919381 | MS.gene38824:intron | 40.0% | |
| ATGCGTCAGCAACATAAAGT+TGG | + | chr7.1:16920887-16920906 | None:intergenic | 40.0% | |
| ATTGGCAATTAGGCTAAGTG+AGG | - | chr7.1:16922220-16922239 | MS.gene38824:CDS | 40.0% | |
| CAGCACAAAACAAGAGAGTT+TGG | - | chr7.1:16918136-16918155 | MS.gene38824:CDS | 40.0% | |
| CATCTCTTAAAGTCCACTCT+TGG | + | chr7.1:16919481-16919500 | None:intergenic | 40.0% | |
| CATGAACAAAGGAATACACG+TGG | + | chr7.1:16918561-16918580 | None:intergenic | 40.0% | |
| CCAAGGAATGTTGAGAAAGA+GGG | - | chr7.1:16920171-16920190 | MS.gene38824:intron | 40.0% | |
| CCGATGGACATATCATCAAA+TGG | - | chr7.1:16918438-16918457 | MS.gene38824:CDS | 40.0% | |
| CCTCTTTCTCAACATTCCTT+GGG | + | chr7.1:16920173-16920192 | None:intergenic | 40.0% | |
| CTCTTTCTCAACATTCCTTG+GGG | + | chr7.1:16920172-16920191 | None:intergenic | 40.0% | |
| GAAGTCTTTGCTAATCTACC+AGG | - | chr7.1:16922020-16922039 | MS.gene38824:CDS | 40.0% | |
| GAATGTTGAGAAAGAGGGAT+CGG | - | chr7.1:16920176-16920195 | MS.gene38824:intron | 40.0% | |
| GACAATCCAAACATGACCAA+CGG | + | chr7.1:16918903-16918922 | None:intergenic | 40.0% | |
| GGAGTAGCACTTAGCAAAAA+TGG | - | chr7.1:16921918-16921937 | MS.gene38824:intron | 40.0% | |
| GGTAAACGAGGTAAGAAAGA+GGG | - | chr7.1:16918824-16918843 | MS.gene38824:intron | 40.0% | |
| GTAACAGAATAGTGAACCAC+GGG | + | chr7.1:16919255-16919274 | None:intergenic | 40.0% | |
| GTCACAGAAACATCAACCTT+CGG | - | chr7.1:16918305-16918324 | MS.gene38824:CDS | 40.0% | |
| GTGTGTCTCGTGAAAAATAC+AGG | - | chr7.1:16921787-16921806 | MS.gene38824:intron | 40.0% | |
| TATGTTGCTGACGCATACAT+GGG | - | chr7.1:16920891-16920910 | MS.gene38824:intron | 40.0% | |
| TGAACCAGAGAAGAAGATGA+GGG | - | chr7.1:16919363-16919382 | MS.gene38824:intron | 40.0% | |
| TGAATTCCGTTGGTCATGTT+TGG | - | chr7.1:16918894-16918913 | MS.gene38824:intron | 40.0% | |
| TGGTAAACGAGGTAAGAAAG+AGG | - | chr7.1:16918823-16918842 | MS.gene38824:intron | 40.0% | |
| TGGTTAGAAACACCTAAAGC+TGG | - | chr7.1:16921990-16922009 | MS.gene38824:intron | 40.0% | |
| TTATGTTGCTGACGCATACA+TGG | - | chr7.1:16920890-16920909 | MS.gene38824:intron | 40.0% | |
| TTCTTTGGATGCTCCTTGTA+TGG | + | chr7.1:16920813-16920832 | None:intergenic | 40.0% | |
| TTTATGTTGTCGGGAAAACC+TGG | + | chr7.1:16922041-16922060 | None:intergenic | 40.0% | |
| ! | ACTTGTGTTGACATAGAGTC+AGG | - | chr7.1:16919116-16919135 | MS.gene38824:intron | 40.0% |
| ! | AGAGATGGAGTATTATGGGT+TGG | - | chr7.1:16922314-16922333 | MS.gene38824:CDS | 40.0% |
| ! | CTCATATTTAGAACTGCTGG+AGG | + | chr7.1:16921042-16921061 | None:intergenic | 40.0% |
| ! | CTTGTGTTGACATAGAGTCA+GGG | - | chr7.1:16919117-16919136 | MS.gene38824:intron | 40.0% |
| ! | GATGATGATGATGAAGAGTG+TGG | - | chr7.1:16920783-16920802 | MS.gene38824:intron | 40.0% |
| ! | GCCAATAGCTAAAGGAGTAT+CGG | - | chr7.1:16919054-16919073 | MS.gene38824:intron | 40.0% |
| ! | GGGTGCAAAGAGAAATTTTC+AGG | + | chr7.1:16919235-16919254 | None:intergenic | 40.0% |
| ! | TGATGTTTCTGTGACATCCT+TGG | + | chr7.1:16918300-16918319 | None:intergenic | 40.0% |
| ! | TGGACTCCGTTTTATGTTGT+CGG | + | chr7.1:16922051-16922070 | None:intergenic | 40.0% |
| ! | TTGTGTTGACATAGAGTCAG+GGG | - | chr7.1:16919118-16919137 | MS.gene38824:intron | 40.0% |
| ! | TTTGAAATTTCAGGGTGTGC+AGG | + | chr7.1:16919172-16919191 | None:intergenic | 40.0% |
| !! | AGTTTGGTGCACAATATACC+TGG | - | chr7.1:16918152-16918171 | MS.gene38824:CDS | 40.0% |
| !! | TGATATGGTTGATTTGGCAG+AGG | - | chr7.1:16920756-16920775 | MS.gene38824:intron | 40.0% |
| !!! | CAGGTTTTAACTCTATGCAG+TGG | + | chr7.1:16919964-16919983 | None:intergenic | 40.0% |
| !!! | GAATTTTTTTTGCACCCCCT+GGG | - | chr7.1:16919921-16919940 | MS.gene38824:intron | 40.0% |
| !!! | TGAATTTTTTTTGCACCCCC+TGG | - | chr7.1:16919920-16919939 | MS.gene38824:intron | 40.0% |
| ACGGCTACCGAGATTATTGA+TGG | - | chr7.1:16920221-16920240 | MS.gene38824:intron | 45.0% | |
| ACTTCTCCTTCCAGTATGCT+GGG | + | chr7.1:16919321-16919340 | None:intergenic | 45.0% | |
| AGTGAGGTTGAGGAAAGAGA+TGG | - | chr7.1:16922299-16922318 | MS.gene38824:CDS | 45.0% | |
| ATAAAACGGAGTCCAAGAGG+AGG | - | chr7.1:16922056-16922075 | MS.gene38824:CDS | 45.0% | |
| ATACTGGAAGGAGAAGTGGA+AGG | - | chr7.1:16919324-16919343 | MS.gene38824:intron | 45.0% | |
| ATCCTAAGTGGTGACAACTC+AGG | - | chr7.1:16921825-16921844 | MS.gene38824:intron | 45.0% | |
| ATCGGTAACCGAGGTAGATT+CGG | - | chr7.1:16920194-16920213 | MS.gene38824:intron | 45.0% | |
| CCATCGGAAACTCCAGTATA+AGG | + | chr7.1:16918425-16918444 | None:intergenic | 45.0% | |
| CCCAAGGAATGTTGAGAAAG+AGG | - | chr7.1:16920170-16920189 | MS.gene38824:intron | 45.0% | |
| CCCTCTTTCTCAACATTCCT+TGG | + | chr7.1:16920174-16920193 | None:intergenic | 45.0% | |
| CCTTATACTGGAGTTTCCGA+TGG | - | chr7.1:16918422-16918441 | MS.gene38824:CDS | 45.0% | |
| CGAGGTAAGAAAGAGGGTAA+TGG | - | chr7.1:16918830-16918849 | MS.gene38824:intron | 45.0% | |
| CTCGTCGCCATCAATAATCT+CGG | + | chr7.1:16920231-16920250 | None:intergenic | 45.0% | |
| CTCTATCTTCAATCGGCATG+AGG | - | chr7.1:16918195-16918214 | MS.gene38824:CDS | 45.0% | |
| GCAATTAGGCTAAGTGAGGA+GGG | - | chr7.1:16922224-16922243 | MS.gene38824:CDS | 45.0% | |
| GCCGATACTCCTTTAGCTAT+TGG | + | chr7.1:16919058-16919077 | None:intergenic | 45.0% | |
| GCGGATCTATATAGAGGTGA+GGG | - | chr7.1:16919140-16919159 | MS.gene38824:intron | 45.0% | |
| GTACTAAGTTTCCCGTCTGA+AGG | + | chr7.1:16920135-16920154 | None:intergenic | 45.0% | |
| GTGTTTGTGTCTGATACCAC+TGG | + | chr7.1:16921410-16921429 | None:intergenic | 45.0% | |
| GTTTCTGTGACATCCTTGGA+TGG | + | chr7.1:16918296-16918315 | None:intergenic | 45.0% | |
| TAAAACGGAGTCCAAGAGGA+GGG | - | chr7.1:16922057-16922076 | MS.gene38824:CDS | 45.0% | |
| TATAAGGTCCTTCACCGTGA+GGG | + | chr7.1:16918409-16918428 | None:intergenic | 45.0% | |
| TCCTAAGTGGTGACAACTCA+GGG | - | chr7.1:16921826-16921845 | MS.gene38824:intron | 45.0% | |
| TCCTTGGATAGGAAAAGGGT+TGG | - | chr7.1:16922136-16922155 | MS.gene38824:CDS | 45.0% | |
| TGAATCGTAACCCAGCATAC+TGG | - | chr7.1:16919308-16919327 | MS.gene38824:intron | 45.0% | |
| TGAGGTCAGCCAATAGCTAA+AGG | - | chr7.1:16919046-16919065 | MS.gene38824:intron | 45.0% | |
| TGCAGCAGAAGAACAACCTT+TGG | - | chr7.1:16920965-16920984 | MS.gene38824:intron | 45.0% | |
| TTGTGCTTCAACGTAGCATC+TGG | - | chr7.1:16920861-16920880 | MS.gene38824:intron | 45.0% | |
| ! | ACCAACCCTTTTCCTATCCA+AGG | + | chr7.1:16922140-16922159 | None:intergenic | 45.0% |
| ! | CTAGTTGTTATTGAGCCCAC+TGG | - | chr7.1:16920915-16920934 | MS.gene38824:intron | 45.0% |
| ! | GATGATGATGAAGAGTGTGG+AGG | - | chr7.1:16920786-16920805 | MS.gene38824:intron | 45.0% |
| ! | GGACTCCGTTTTATGTTGTC+GGG | + | chr7.1:16922050-16922069 | None:intergenic | 45.0% |
| ! | TGGCAGTTTTCATGACTGCA+TGG | - | chr7.1:16918246-16918265 | MS.gene38824:CDS | 45.0% |
| ! | TTTCTAGCAATGCCACCAGT+GGG | + | chr7.1:16920933-16920952 | None:intergenic | 45.0% |
| !! | ATGTTACTTTGGGCCAAGAG+TGG | - | chr7.1:16919465-16919484 | MS.gene38824:intron | 45.0% |
| !! | GAGTATCGGCCAATAGCTAA+AGG | - | chr7.1:16919068-16919087 | MS.gene38824:intron | 45.0% |
| !! | GGAGTACTGGATTGGCAATT+AGG | - | chr7.1:16922210-16922229 | MS.gene38824:CDS | 45.0% |
| !! | TTTTCTAGCAATGCCACCAG+TGG | + | chr7.1:16920934-16920953 | None:intergenic | 45.0% |
| !! | AATAAATAAAAAATAAACAA+AGG | + | chr7.1:16919743-16919762 | None:intergenic | 5.0% |
| !! | ATATATATACATATATATAA+TGG | - | chr7.1:16919692-16919711 | MS.gene38824:CDS | 5.0% |
| AAGTGAGGAGGGTGATGTGT+TGG | - | chr7.1:16922235-16922254 | MS.gene38824:CDS | 50.0% | |
| ACCAGAGAAGAAGATGAGGG+AGG | - | chr7.1:16919366-16919385 | MS.gene38824:intron | 50.0% | |
| ACGTTGAAGCACAACCCAAG+TGG | + | chr7.1:16920855-16920874 | None:intergenic | 50.0% | |
| AGAGAAGAAGATGAGGGAGG+CGG | - | chr7.1:16919369-16919388 | MS.gene38824:intron | 50.0% | |
| AGAGTGTGGAGGACCATACA+AGG | - | chr7.1:16920797-16920816 | MS.gene38824:intron | 50.0% | |
| CACGGTGAAGGACCTTATAC+TGG | - | chr7.1:16918410-16918429 | MS.gene38824:CDS | 50.0% | |
| CACTTCTCCTTCCAGTATGC+TGG | + | chr7.1:16919322-16919341 | None:intergenic | 50.0% | |
| CAGCATACTGGAAGGAGAAG+TGG | - | chr7.1:16919320-16919339 | MS.gene38824:intron | 50.0% | |
| CCAAACATCGGAAACTCCGA+AGG | + | chr7.1:16918324-16918343 | None:intergenic | 50.0% | |
| CCACAACACGAGGAGTTGTT+GGG | + | chr7.1:16920098-16920117 | None:intergenic | 50.0% | |
| CCGAGGTAGATTCGGCTAAA+CGG | - | chr7.1:16920202-16920221 | MS.gene38824:intron | 50.0% | |
| CCGTTTAGCCGAATCTACCT+CGG | + | chr7.1:16920205-16920224 | None:intergenic | 50.0% | |
| CCTGTGTGGAGAAGAAGTGA+CGG | + | chr7.1:16918495-16918514 | None:intergenic | 50.0% | |
| CCTTCGGAGTTTCCGATGTT+TGG | - | chr7.1:16918321-16918340 | MS.gene38824:CDS | 50.0% | |
| CCTTGGATGGTGTAACTCCA+CGG | + | chr7.1:16918283-16918302 | None:intergenic | 50.0% | |
| CGTTGAAGCACAACCCAAGT+GGG | + | chr7.1:16920854-16920873 | None:intergenic | 50.0% | |
| GACGAAGTTCATTTCCTCGC+AGG | + | chr7.1:16919995-16920014 | None:intergenic | 50.0% | |
| GCCGTCCCAAGATAAGTGTT+AGG | + | chr7.1:16920040-16920059 | None:intergenic | 50.0% | |
| GGCAATTAGGCTAAGTGAGG+AGG | - | chr7.1:16922223-16922242 | MS.gene38824:CDS | 50.0% | |
| GGCGGATCTATATAGAGGTG+AGG | - | chr7.1:16919139-16919158 | MS.gene38824:intron | 50.0% | |
| GTATAAGGTCCTTCACCGTG+AGG | + | chr7.1:16918410-16918429 | None:intergenic | 50.0% | |
| TAAGTGGTGACAACTCAGGG+AGG | - | chr7.1:16921829-16921848 | MS.gene38824:intron | 50.0% | |
| TCAGGGGCGGATCTATATAG+AGG | - | chr7.1:16919134-16919153 | MS.gene38824:intron | 50.0% | |
| TCCACAACACGAGGAGTTGT+TGG | + | chr7.1:16920099-16920118 | None:intergenic | 50.0% | |
| TCCCTGAGTTGTCACCACTT+AGG | + | chr7.1:16921830-16921849 | None:intergenic | 50.0% | |
| TCGTAACCCAGCATACTGGA+AGG | - | chr7.1:16919312-16919331 | MS.gene38824:intron | 50.0% | |
| TCGTGTTGTGGAACCAGAGT+TGG | - | chr7.1:16920107-16920126 | MS.gene38824:intron | 50.0% | |
| TGTTGACATAGAGTCAGGGG+CGG | - | chr7.1:16919121-16919140 | MS.gene38824:intron | 50.0% | |
| ! | AACTCTGGTTCCACAACACG+AGG | + | chr7.1:16920108-16920127 | None:intergenic | 50.0% |
| ! | AGTTTTGCCTTCGACCCTCA+CGG | - | chr7.1:16918392-16918411 | MS.gene38824:CDS | 50.0% |
| ! | GAGTCCAAGAGGAGGGTTTT+GGG | - | chr7.1:16922064-16922083 | MS.gene38824:CDS | 50.0% |
| ! | GCTAAGGTGAAAGGGAGTAC+TGG | - | chr7.1:16922197-16922216 | MS.gene38824:CDS | 50.0% |
| ! | GTTGTTATTGAGCCCACTGG+TGG | - | chr7.1:16920918-16920937 | MS.gene38824:intron | 50.0% |
| !! | CTTCTAAAGTTGACGCCCCA+AGG | - | chr7.1:16920154-16920173 | MS.gene38824:intron | 50.0% |
| !! | GCTGAGAGTGTTAACCTGTG+TGG | + | chr7.1:16918509-16918528 | None:intergenic | 50.0% |
| !! | GGTGAAAGGGAGTACTGGAT+TGG | - | chr7.1:16922202-16922221 | MS.gene38824:CDS | 50.0% |
| AACCTGTCAGAAAGCCTGCG+AGG | - | chr7.1:16919978-16919997 | MS.gene38824:intron | 55.0% | |
| ACATATGTGGGCGCCCACTT+GGG | - | chr7.1:16920838-16920857 | MS.gene38824:intron | 55.0% | |
| CCAACCCAAAACCCTCCTCT+TGG | + | chr7.1:16922071-16922090 | None:intergenic | 55.0% | |
| CCAACGGCGCCGTATTCAAT+CGG | + | chr7.1:16918365-16918384 | None:intergenic | 55.0% | |
| CCCAACAACTCCTCGTGTTG+TGG | - | chr7.1:16920095-16920114 | MS.gene38824:intron | 55.0% | |
| CCGTCACTTCTTCTCCACAC+AGG | - | chr7.1:16918492-16918511 | MS.gene38824:CDS | 55.0% | |
| CCGTGGAGTTACACCATCCA+AGG | - | chr7.1:16918280-16918299 | MS.gene38824:CDS | 55.0% | |
| GAAAGAGGGATCGGTAACCG+AGG | - | chr7.1:16920185-16920204 | MS.gene38824:intron | 55.0% | |
| GAGGCCACAACTGCACCTTA+CGG | - | chr7.1:16918214-16918233 | MS.gene38824:CDS | 55.0% | |
| GCACCGTCATCAGAACCGTT+GGG | - | chr7.1:16918460-16918479 | MS.gene38824:CDS | 55.0% | |
| GCATGGTTAGCATACAGCCG+TGG | - | chr7.1:16918263-16918282 | MS.gene38824:CDS | 55.0% | |
| GCCTCCCTCATCTTCTTCTC+TGG | + | chr7.1:16919370-16919389 | None:intergenic | 55.0% | |
| GGCAAAACTCTCCGGTCCAA+CGG | + | chr7.1:16918381-16918400 | None:intergenic | 55.0% | |
| GGGTCGAAGGCAAAACTCTC+CGG | + | chr7.1:16918389-16918408 | None:intergenic | 55.0% | |
| GTTGGGCTCGTCAAAGCAGA+GGG | + | chr7.1:16920081-16920100 | None:intergenic | 55.0% | |
| TGACGGCAAAGTCCTCCCAA+CGG | + | chr7.1:16918478-16918497 | None:intergenic | 55.0% | |
| TGTTGGGCTCGTCAAAGCAG+AGG | + | chr7.1:16920082-16920101 | None:intergenic | 55.0% | |
| TTCCTCGCAGGCTTTCTGAC+AGG | + | chr7.1:16919983-16920002 | None:intergenic | 55.0% | |
| ! | CAGAGTTGGCTCCTTCAGAC+GGG | - | chr7.1:16920121-16920140 | MS.gene38824:intron | 55.0% |
| ! | CCAGAGTTGGCTCCTTCAGA+CGG | - | chr7.1:16920120-16920139 | MS.gene38824:intron | 55.0% |
| ! | CCTCCCAACGGTTCTGATGA+CGG | + | chr7.1:16918466-16918485 | None:intergenic | 55.0% |
| ! | GGAGTCCAAGAGGAGGGTTT+TGG | - | chr7.1:16922063-16922082 | MS.gene38824:CDS | 55.0% |
| !! | GAACCAGGTAGTTGGCCTTG+CGG | - | chr7.1:16920299-16920318 | MS.gene38824:intron | 55.0% |
| !!! | CCAAGAGGAGGGTTTTGGGT+TGG | - | chr7.1:16922068-16922087 | MS.gene38824:CDS | 55.0% |
| CACATATGTGGGCGCCCACT+TGG | - | chr7.1:16920837-16920856 | MS.gene38824:intron | 60.0% | |
| CCGATTGAATACGGCGCCGT+TGG | - | chr7.1:16918362-16918381 | MS.gene38824:CDS | 60.0% | |
| CCGTCATCAGAACCGTTGGG+AGG | - | chr7.1:16918463-16918482 | MS.gene38824:CDS | 60.0% | |
| CCGTCTGAAGGAGCCAACTC+TGG | + | chr7.1:16920123-16920142 | None:intergenic | 60.0% | |
| CTCTATGCAGTGGCGTGTCC+AGG | + | chr7.1:16919954-16919973 | None:intergenic | 60.0% | |
| GCCACAACTGCACCTTACGG+CGG | - | chr7.1:16918217-16918236 | MS.gene38824:CDS | 60.0% | |
| GGCACCGTCATCAGAACCGT+TGG | - | chr7.1:16918459-16918478 | MS.gene38824:CDS | 60.0% | |
| TAGCCGCAAGGCCAACTACC+TGG | + | chr7.1:16920305-16920324 | None:intergenic | 60.0% | |
| TCCTTCACCGTGAGGGTCGA+AGG | + | chr7.1:16918402-16918421 | None:intergenic | 60.0% | |
| TGAATACGGCGCCGTTGGAC+CGG | - | chr7.1:16918367-16918386 | MS.gene38824:CDS | 60.0% | |
| ! | TTTTTGCACCCCCTGGGCCA+GGG | - | chr7.1:16919927-16919946 | MS.gene38824:intron | 60.0% |
| !!! | TTTTTTGCACCCCCTGGGCC+AGG | - | chr7.1:16919926-16919945 | MS.gene38824:intron | 60.0% |
| GCCGCCGTAAGGTGCAGTTG+TGG | + | chr7.1:16918221-16918240 | None:intergenic | 65.0% | |
| GCCTTCGACCCTCACGGTGA+AGG | - | chr7.1:16918398-16918417 | MS.gene38824:CDS | 65.0% | |
| CAGTGGCGTGTCCAGGACCC+TGG | + | chr7.1:16919947-16919966 | None:intergenic | 70.0% | |
| CTGCCACGACAGCCGCCGTA+AGG | + | chr7.1:16918232-16918251 | None:intergenic | 70.0% | |
| GCACCTTACGGCGGCTGTCG+TGG | - | chr7.1:16918226-16918245 | MS.gene38824:CDS | 70.0% | |
| GTGTCCAGGACCCTGGCCCA+GGG | + | chr7.1:16919940-16919959 | None:intergenic | 70.0% | |
| TGTCCAGGACCCTGGCCCAG+GGG | + | chr7.1:16919939-16919958 | None:intergenic | 70.0% | |
| CGTGTCCAGGACCCTGGCCC+AGG | + | chr7.1:16919941-16919960 | None:intergenic | 75.0% | |
| GTCCAGGACCCTGGCCCAGG+GGG | + | chr7.1:16919938-16919957 | None:intergenic | 75.0% | |
| ! | CACCCCCTGGGCCAGGGTCC+TGG | - | chr7.1:16919933-16919952 | MS.gene38824:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16918136 | 16922397 | 16918136 | ID=MS.gene38824 |
| chr7.1 | mRNA | 16918136 | 16922397 | 16918136 | ID=MS.gene38824.t1;Parent=MS.gene38824 |
| chr7.1 | exon | 16922020 | 16922397 | 16922020 | ID=MS.gene38824.t1.exon1;Parent=MS.gene38824.t1 |
| chr7.1 | CDS | 16922020 | 16922397 | 16922020 | ID=cds.MS.gene38824.t1;Parent=MS.gene38824.t1 |
| chr7.1 | exon | 16919467 | 16919757 | 16919467 | ID=MS.gene38824.t1.exon2;Parent=MS.gene38824.t1 |
| chr7.1 | CDS | 16919467 | 16919757 | 16919467 | ID=cds.MS.gene38824.t1;Parent=MS.gene38824.t1 |
| chr7.1 | exon | 16918136 | 16918724 | 16918136 | ID=MS.gene38824.t1.exon3;Parent=MS.gene38824.t1 |
| chr7.1 | CDS | 16918136 | 16918724 | 16918136 | ID=cds.MS.gene38824.t1;Parent=MS.gene38824.t1 |
| Gene Sequence |
| Protein sequence |
