Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39118.t1 | XP_003625056.1 | 91.8 | 813 | 55 | 3 | 1 | 813 | 1 | 801 | 0.00E+00 | 1464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39118.t1 | Q9LZA6 | 67.3 | 805 | 222 | 13 | 4 | 790 | 3 | 784 | 4.3e-296 | 1018.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39118.t1 | G7KRQ5 | 91.8 | 813 | 55 | 3 | 1 | 813 | 1 | 801 | 0.0e+00 | 1464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050463 | MS.gene39118 | 0.814205 | 1.73E-51 | -1.69E-46 |
| MS.gene050528 | MS.gene39118 | 0.81288 | 3.39E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39118.t1 | MTR_7g090470 | 91.759 | 813 | 55 | 3 | 1 | 813 | 1 | 801 | 0.0 | 1513 |
| MS.gene39118.t1 | MTR_1g087300 | 70.525 | 838 | 200 | 11 | 1 | 809 | 1 | 820 | 0.0 | 1174 |
| MS.gene39118.t1 | MTR_6g080170 | 69.723 | 829 | 210 | 9 | 1 | 803 | 1 | 814 | 0.0 | 1164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39118.t1 | AT5G04040 | 67.568 | 814 | 210 | 14 | 1 | 790 | 1 | 784 | 0.0 | 1079 |
| MS.gene39118.t1 | AT5G04040 | 67.568 | 814 | 210 | 14 | 1 | 790 | 1 | 784 | 0.0 | 1079 |
| MS.gene39118.t1 | AT3G57140 | 60.312 | 834 | 255 | 13 | 4 | 803 | 3 | 794 | 0.0 | 959 |
| MS.gene39118.t1 | AT3G57140 | 60.312 | 834 | 255 | 13 | 4 | 803 | 3 | 794 | 0.0 | 959 |
Find 183 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATAGGTGTCTTGATTT+TGG | 0.112304 | 7.4:+18324152 | MS.gene39118:CDS |
| TTGGTAAGACAATAGCTTTC+AGG | 0.168918 | 7.4:+18320802 | MS.gene39118:CDS |
| GCCGATCTTGTTCGAAATTT+AGG | 0.193120 | 7.4:+18321239 | MS.gene39118:CDS |
| AAAATGTTGATTTGATTTCT+TGG | 0.204445 | 7.4:+18323823 | MS.gene39118:CDS |
| AAAGAGTTTGTAAGAACTTA+TGG | 0.211951 | 7.4:+18322128 | MS.gene39118:CDS |
| TGGCTTATAGGAGGAAATTT+TGG | 0.220568 | 7.4:+18321030 | MS.gene39118:CDS |
| AATATCCCTTGTGGGTTTCT+TGG | 0.223407 | 7.4:-18320942 | None:intergenic |
| CTAGGGCTGAAATGGCTTAT+AGG | 0.269330 | 7.4:+18321018 | MS.gene39118:CDS |
| CATCGCCTCATGTCGTTATA+TGG | 0.271327 | 7.4:+18321843 | MS.gene39118:CDS |
| TCTTCGGGACCTAGATTAAA+AGG | 0.277995 | 7.4:-18321962 | None:intergenic |
| AGCCTACCCTTGTGTAGTTC+CGG | 0.289705 | 7.4:-18321275 | None:intergenic |
| CAAATATTTCAACTCTTGTT+AGG | 0.290246 | 7.4:+18320861 | MS.gene39118:CDS |
| AGATCTGATTCATTCATCTT+TGG | 0.295400 | 7.4:-18321125 | None:intergenic |
| TTGATTTCTTGGACTAAATC+TGG | 0.309082 | 7.4:+18323834 | MS.gene39118:CDS |
| TCAATTCTTGAGCTTCAAAA+AGG | 0.310913 | 7.4:-18321898 | None:intergenic |
| GGTATCGACTCAATTGAAAA+TGG | 0.312116 | 7.4:+18321334 | MS.gene39118:CDS |
| TCTTGTTAGGATTCTTGTAT+AGG | 0.314580 | 7.4:+18320874 | MS.gene39118:CDS |
| TGACTTTCTCCGAAACTTAG+AGG | 0.316722 | 7.4:+18323896 | MS.gene39118:CDS |
| ATTATACAGAACCCTTCTTA+TGG | 0.320789 | 7.4:+18323489 | MS.gene39118:CDS |
| GATATGACAGGTAGAGTTCT+TGG | 0.331797 | 7.4:+18321764 | MS.gene39118:CDS |
| ATTGGTCCTTCAGACATTCT+TGG | 0.332127 | 7.4:+18320783 | MS.gene39118:CDS |
| AAGACTGAAAAGATTCCTAA+TGG | 0.332261 | 7.4:+18324089 | MS.gene39118:CDS |
| CGACGGTGTGGAGCCTTCTT+CGG | 0.340251 | 7.4:-18321978 | None:intergenic |
| GAATTCGGAGGAGTTATCTT+TGG | 0.346637 | 7.4:+18321367 | MS.gene39118:CDS |
| CTTCAAGAAGAATTCCTTCA+TGG | 0.352416 | 7.4:+18323709 | MS.gene39118:CDS |
| CCCAGCTACATCTTCTCCCT+TGG | 0.356691 | 7.4:-18323533 | None:intergenic |
| GACGGTGTGGAGCCTTCTTC+GGG | 0.361739 | 7.4:-18321977 | None:intergenic |
| CCAAACTGTTTGCTCAAGAA+TGG | 0.365245 | 7.4:+18322535 | MS.gene39118:CDS |
| AGGTAGAGTTCTTGGAATTA+CGG | 0.369794 | 7.4:+18321772 | MS.gene39118:CDS |
| CATGAAACAAGACATGCTTT+TGG | 0.371302 | 7.4:+18321410 | MS.gene39118:CDS |
| AAGCCTTAACACCTTCAAAT+AGG | 0.373954 | 7.4:+18324138 | MS.gene39118:CDS |
| AATTGAAACCCTTTCTATCA+TGG | 0.375512 | 7.4:+18320913 | MS.gene39118:CDS |
| TTTGACAGTACTAGACAAAC+TGG | 0.376144 | 7.4:-18323679 | None:intergenic |
| CTCTTGCCTAGGATAATTGC+TGG | 0.380432 | 7.4:+18321515 | MS.gene39118:CDS |
| GCCTACCCTTGTGTAGTTCC+GGG | 0.381734 | 7.4:-18321274 | None:intergenic |
| CTAGAACTTGGCTTTCCCTT+AGG | 0.390185 | 7.4:+18322504 | MS.gene39118:CDS |
| TACAGAGCTTCTATTTAGTT+CGG | 0.395991 | 7.4:-18323925 | None:intergenic |
| CGGAGTCAACCTCTAAGTTT+CGG | 0.396275 | 7.4:-18323905 | None:intergenic |
| ACAGTATCGGTTTCCTTCCC+TGG | 0.396540 | 7.4:-18324233 | None:intergenic |
| CTAGGAGGTTCGTGCTTCCT+TGG | 0.399093 | 7.4:-18321803 | None:intergenic |
| CCATTCTTGAGCAAACAGTT+TGG | 0.401498 | 7.4:-18322535 | None:intergenic |
| GGATTCTTGTATAGGTTTAG+AGG | 0.403052 | 7.4:+18320882 | MS.gene39118:CDS |
| TGTGAAAGCTAGGGCTGAAA+TGG | 0.403324 | 7.4:+18321010 | MS.gene39118:CDS |
| ACGGCTTCTTGCGCCTTCCC+TGG | 0.403327 | 7.4:+18321875 | MS.gene39118:CDS |
| CATAAGCTTCTTGAAATGTA+AGG | 0.404949 | 7.4:-18321742 | None:intergenic |
| ACACCTATTTGAAGGTGTTA+AGG | 0.405153 | 7.4:-18324141 | None:intergenic |
| TGGTAAGACAATAGCTTTCA+GGG | 0.407317 | 7.4:+18320803 | MS.gene39118:CDS |
| TTAAGTGGTGGTGCTTCTCT+AGG | 0.407934 | 7.4:+18321449 | MS.gene39118:CDS |
| AATGGTTTGTGACTCGAATT+CGG | 0.410815 | 7.4:+18321352 | MS.gene39118:CDS |
| GCTTGCTCACCTTGTGGTGT+TGG | 0.412876 | 7.4:+18322455 | MS.gene39118:intron |
| TCAGATTCTGAGTTCCTATC+TGG | 0.418421 | 7.4:-18323999 | None:intergenic |
| AGATCTTTATGATGTTGAAT+TGG | 0.422536 | 7.4:+18321142 | MS.gene39118:CDS |
| TCCCTTGTGGGTTTCTTGGA+TGG | 0.424898 | 7.4:-18320938 | None:intergenic |
| AGCAGAAGGAAATTGACAAC+AGG | 0.425627 | 7.4:+18324021 | MS.gene39118:CDS |
| AGGTACTCCTTGATTAACTT+AGG | 0.429915 | 7.4:-18321305 | None:intergenic |
| CCACACCGTCGCGCCGTTGG+AGG | 0.433493 | 7.4:+18321990 | MS.gene39118:CDS |
| TGCTCACCTTGTGGTGTTGG+AGG | 0.433565 | 7.4:+18322458 | MS.gene39118:CDS |
| CTTTGATCCATGCTCATAGC+TGG | 0.434173 | 7.4:-18324293 | None:intergenic |
| ACATTAAACACAATCCCATT+AGG | 0.444767 | 7.4:-18324104 | None:intergenic |
| CCCTTTGATGAGAACCGCTT+CGG | 0.449508 | 7.4:+18323860 | MS.gene39118:CDS |
| CAATCATTTCATTGTCAGTC+AGG | 0.450854 | 7.4:+18322073 | MS.gene39118:CDS |
| GTTGTTGAGTGTGATCAAAT+TGG | 0.451946 | 7.4:+18324206 | MS.gene39118:CDS |
| TGCTTTGACCTATGATGAAT+GGG | 0.452596 | 7.4:+18321070 | MS.gene39118:CDS |
| AGACTGAAAAGATTCCTAAT+GGG | 0.456183 | 7.4:+18324090 | MS.gene39118:CDS |
| CGTTATATGGAGTGCGGTAA+CGG | 0.458968 | 7.4:+18321856 | MS.gene39118:CDS |
| AGTCTTCAAAAGATCACCTT+CGG | 0.459252 | 7.4:-18324072 | None:intergenic |
| AGAATGTCTGAAGGACCAAT+TGG | 0.461862 | 7.4:-18320780 | None:intergenic |
| TTCTTATGGCGAGCTTCAAA+AGG | 0.463783 | 7.4:+18323503 | MS.gene39118:CDS |
| GCTACATCTTCTCCCTTGGT+TGG | 0.468308 | 7.4:-18323529 | None:intergenic |
| GATTCTTGTATAGGTTTAGA+GGG | 0.472768 | 7.4:+18320883 | MS.gene39118:CDS |
| ATAATTGCTGGTTCAAGTGT+TGG | 0.474255 | 7.4:+18321527 | MS.gene39118:CDS |
| CAAACTGTTTGCTCAAGAAT+GGG | 0.476141 | 7.4:+18322536 | MS.gene39118:CDS |
| GCTCCACACCGTCGCGCCGT+TGG | 0.477453 | 7.4:+18321987 | MS.gene39118:CDS |
| TCGAAGAAACTCTGAAGCTC+TGG | 0.478844 | 7.4:-18321587 | None:intergenic |
| GCCGAAGCGGTTCTCATCAA+AGG | 0.480107 | 7.4:-18323861 | None:intergenic |
| TGGATGGAACCATGATAGAA+AGG | 0.480203 | 7.4:-18320922 | None:intergenic |
| GGTACTCCTTGATTAACTTA+GGG | 0.481650 | 7.4:-18321304 | None:intergenic |
| CAGTTTGGCAAGTCCACCTA+AGG | 0.483152 | 7.4:-18322520 | None:intergenic |
| GTTACACAAATGTGAAAGCT+AGG | 0.483780 | 7.4:+18321000 | MS.gene39118:CDS |
| TCCTCGTTGCATCAAGCCAT+TGG | 0.485011 | 7.4:+18323789 | MS.gene39118:CDS |
| CATACCTGAGCAAGGGTAGC+AGG | 0.486656 | 7.4:-18322582 | None:intergenic |
| GAAAGCCAAGTTCTAGTACT+TGG | 0.487567 | 7.4:-18322497 | None:intergenic |
| CCGAAGCGGTTCTCATCAAA+GGG | 0.490720 | 7.4:-18323860 | None:intergenic |
| AAATCAAGACACCTATTTGA+AGG | 0.491508 | 7.4:-18324149 | None:intergenic |
| GAACTTGGCTTTCCCTTAGG+TGG | 0.491624 | 7.4:+18322507 | MS.gene39118:CDS |
| GTGCTTTGACCTATGATGAA+TGG | 0.491988 | 7.4:+18321069 | MS.gene39118:CDS |
| AACTCTTTCAATCTCAAAAG+TGG | 0.492329 | 7.4:-18322113 | None:intergenic |
| AGATTAAAAGGAGGATGATA+AGG | 0.496518 | 7.4:-18321950 | None:intergenic |
| TATGCCTGCTACCCTTGCTC+AGG | 0.496983 | 7.4:+18322578 | MS.gene39118:CDS |
| GTCAAGTAGTTAAGACATCT+AGG | 0.501575 | 7.4:-18321821 | None:intergenic |
| GCGGCGCTGTTCATGAGATC+AGG | 0.503632 | 7.4:+18321684 | MS.gene39118:CDS |
| TGTGAATGGATCTAGCATAC+TGG | 0.506812 | 7.4:+18324046 | MS.gene39118:CDS |
| CAAGAAGCTTATGATATGAC+AGG | 0.510360 | 7.4:+18321752 | MS.gene39118:CDS |
| ACCAAGGGAGAAGATGTAGC+TGG | 0.510404 | 7.4:+18323532 | MS.gene39118:CDS |
| TGTGATCAAATTGGTTGTCC+AGG | 0.512720 | 7.4:+18324215 | MS.gene39118:CDS |
| ATCTATTATAAGTGCTATTG+TGG | 0.513584 | 7.4:+18321550 | MS.gene39118:CDS |
| CTGAAGGACCAATTGGAAAA+CGG | 0.518566 | 7.4:-18320773 | None:intergenic |
| TTTAATCTAGGTCCCGAAGA+AGG | 0.518636 | 7.4:+18321965 | MS.gene39118:CDS |
| TCAGACTCACAGGACCAGAT+AGG | 0.518991 | 7.4:+18323985 | MS.gene39118:CDS |
| TCAATGCTAATATCCCTTGT+GGG | 0.520312 | 7.4:-18320950 | None:intergenic |
| ATTGACAACAGGGTTGTGAA+TGG | 0.520931 | 7.4:+18324032 | MS.gene39118:CDS |
| ACCTAAATTTCGAACAAGAT+CGG | 0.521885 | 7.4:-18321240 | None:intergenic |
| GGATGGAACCATGATAGAAA+GGG | 0.522323 | 7.4:-18320921 | None:intergenic |
| ACCTATGATGAATGGGCTCA+TGG | 0.523380 | 7.4:+18321077 | MS.gene39118:CDS |
| ATGGCACGAGAGAATTCATC+AGG | 0.526757 | 7.4:+18323738 | MS.gene39118:CDS |
| CTTTCAACTGCATCATAGCC+AGG | 0.528707 | 7.4:-18322037 | None:intergenic |
| CCTCCAACGGCGCGACGGTG+TGG | 0.529607 | 7.4:-18321990 | None:intergenic |
| GTCAAGAGGGTCGCGACACG+CGG | 0.529850 | 7.4:+18321665 | MS.gene39118:CDS |
| TTGATGGCAAAGAATAGAAG+TGG | 0.530694 | 7.4:+18321917 | MS.gene39118:CDS |
| TCAAGTCCCTAAGTTAATCA+AGG | 0.537086 | 7.4:+18321298 | MS.gene39118:CDS |
| CTCAAAAGTGGTGCAATGTG+AGG | 0.537695 | 7.4:-18322101 | None:intergenic |
| ATCAATGCTAATATCCCTTG+TGG | 0.543933 | 7.4:-18320951 | None:intergenic |
| CCGTCGCGCCGTTGGAGGGA+TGG | 0.544482 | 7.4:+18321995 | MS.gene39118:CDS |
| CTTGAACCAGCAATTATCCT+AGG | 0.545320 | 7.4:-18321521 | None:intergenic |
| GAACTCAGAATCTGAGCAGA+AGG | 0.547313 | 7.4:+18324007 | MS.gene39118:CDS |
| CACACCGTCGCGCCGTTGGA+GGG | 0.548957 | 7.4:+18321991 | MS.gene39118:CDS |
| TGTAACCAAGTACTAGAACT+TGG | 0.552675 | 7.4:+18322492 | MS.gene39118:CDS |
| CTATTGTGGCCACTAGATCA+TGG | 0.555238 | 7.4:+18321564 | MS.gene39118:CDS |
| GATCATATTAGTAATGAAGC+TGG | 0.555607 | 7.4:+18320744 | MS.gene39118:CDS |
| ACGAGGAAGAAACTTCTGTA+AGG | 0.559219 | 7.4:-18323773 | None:intergenic |
| GCTACGTAGTCGTCGACAAG+AGG | 0.562507 | 7.4:+18321184 | MS.gene39118:CDS |
| CTTCAAAAGGCAGCCAACCA+AGG | 0.568156 | 7.4:+18323516 | MS.gene39118:CDS |
| GGCAGTTGCAAATGTTGTTG+AGG | 0.568502 | 7.4:+18321705 | MS.gene39118:CDS |
| CGTGCCATGCAATTCCATGA+AGG | 0.569140 | 7.4:-18323723 | None:intergenic |
| TATCATAGTTTCAGACTCAC+AGG | 0.569388 | 7.4:+18323975 | MS.gene39118:CDS |
| AATTCCTTCATGGAATTGCA+TGG | 0.573259 | 7.4:+18323719 | MS.gene39118:CDS |
| TGGAGGCAACTTCGCTGCCA+AGG | 0.575909 | 7.4:+18322148 | MS.gene39118:CDS |
| AAGCTCTGGCCATGATCTAG+TGG | 0.576534 | 7.4:-18321573 | None:intergenic |
| TCCATGAGCCCATTCATCAT+AGG | 0.577525 | 7.4:-18321078 | None:intergenic |
| ATTTCTTGGACTAAATCTGG+TGG | 0.579766 | 7.4:+18323837 | MS.gene39118:CDS |
| TTCAAAAGGCAGCCAACCAA+GGG | 0.579965 | 7.4:+18323517 | MS.gene39118:CDS |
| TTTGAAGCTCGCCATAAGAA+GGG | 0.579991 | 7.4:-18323500 | None:intergenic |
| ATCCATGCTCATAGCTGGTG+CGG | 0.580528 | 7.4:-18324288 | None:intergenic |
| TAAAACATAAACTCTTGCCT+AGG | 0.584476 | 7.4:+18321504 | MS.gene39118:CDS |
| TCAAATTGGTTGTCCAGGGA+AGG | 0.584566 | 7.4:+18324220 | MS.gene39118:CDS |
| AGAGCTTCAGAGTTTCTTCG+AGG | 0.587362 | 7.4:+18321589 | MS.gene39118:CDS |
| AGCTTAGAGATTGACTTACC+TGG | 0.587930 | 7.4:+18322019 | MS.gene39118:CDS |
| AGAATCAGAGCTAACAGTAT+CGG | 0.588346 | 7.4:-18324246 | None:intergenic |
| AACAAACGTATTTGCCGAAG+CGG | 0.592424 | 7.4:-18323874 | None:intergenic |
| ATTAGTAATGAAGCTGGTGT+AGG | 0.594036 | 7.4:+18320750 | MS.gene39118:CDS |
| CCATCCCTCCAACGGCGCGA+CGG | 0.595057 | 7.4:-18321995 | None:intergenic |
| GTGTAACCCGGAACTACACA+AGG | 0.595240 | 7.4:+18321268 | MS.gene39118:CDS |
| GAATTACGGTTTGCTCTCCA+AGG | 0.596787 | 7.4:+18321786 | MS.gene39118:CDS |
| ATATAGAACATACCTGAGCA+AGG | 0.603041 | 7.4:-18322590 | None:intergenic |
| ATTCTTGTATAGGTTTAGAG+GGG | 0.604075 | 7.4:+18320884 | MS.gene39118:CDS |
| CCAAGGGAGAAGATGTAGCT+GGG | 0.606973 | 7.4:+18323533 | MS.gene39118:CDS |
| TATAGAACATACCTGAGCAA+GGG | 0.607230 | 7.4:-18322589 | None:intergenic |
| ATCCGCACCAGCTATGAGCA+TGG | 0.607435 | 7.4:+18324286 | MS.gene39118:CDS |
| GTGATCAAATTGGTTGTCCA+GGG | 0.610935 | 7.4:+18324216 | MS.gene39118:CDS |
| TTTATGATGTTGAATTGGTG+AGG | 0.611387 | 7.4:+18321147 | MS.gene39118:CDS |
| CTACGTAGTCGTCGACAAGA+GGG | 0.611708 | 7.4:+18321185 | MS.gene39118:CDS |
| CTATGATACTGAAAATCACG+AGG | 0.615992 | 7.4:-18323960 | None:intergenic |
| ACTTGCTCTTGATGAATCTG+TGG | 0.621655 | 7.4:+18323593 | MS.gene39118:CDS |
| TTACACAAATGTGAAAGCTA+GGG | 0.623147 | 7.4:+18321001 | MS.gene39118:CDS |
| GGGCTGAAATGGCTTATAGG+AGG | 0.624284 | 7.4:+18321021 | MS.gene39118:CDS |
| GTCTTACCAAGAATGTCTGA+AGG | 0.631002 | 7.4:-18320789 | None:intergenic |
| CTGTTTGCTCAAGAATGGGA+AGG | 0.632125 | 7.4:+18322540 | MS.gene39118:CDS |
| TTTAGGTAATATGTGTAACC+CGG | 0.636180 | 7.4:+18321256 | MS.gene39118:CDS |
| ATTGAGTCGATACCTCATCA+AGG | 0.637587 | 7.4:-18321325 | None:intergenic |
| CTAAGCTACCATCCCTCCAA+CGG | 0.642169 | 7.4:-18322003 | None:intergenic |
| AGTTTGGCAAGTCCACCTAA+GGG | 0.646421 | 7.4:-18322519 | None:intergenic |
| ACCCGGAACTACACAAGGGT+AGG | 0.647787 | 7.4:+18321273 | MS.gene39118:CDS |
| TGTGTAGCTTGCTCACCTTG+TGG | 0.647870 | 7.4:+18322449 | MS.gene39118:intron |
| GTTTCACCTCCAACACCACA+AGG | 0.648698 | 7.4:-18322464 | None:intergenic |
| TGGTGTTGGAGGTGAAACAT+AGG | 0.654584 | 7.4:+18322469 | MS.gene39118:CDS |
| GAGTTTGTAAGAACTTATGG+AGG | 0.654786 | 7.4:+18322131 | MS.gene39118:CDS |
| TCAAAAGTGGTGCAATGTGA+GGG | 0.654998 | 7.4:-18322100 | None:intergenic |
| AATCAAGGAGTACCTTGATG+AGG | 0.664565 | 7.4:+18321313 | MS.gene39118:CDS |
| TCGGGACCTAGATTAAAAGG+AGG | 0.670373 | 7.4:-18321959 | None:intergenic |
| GCAGAAGGAAATTGACAACA+GGG | 0.672804 | 7.4:+18324022 | MS.gene39118:CDS |
| AAGTGGTGCAATGTGAGGGT+TGG | 0.676112 | 7.4:-18322096 | None:intergenic |
| TTCCATCCAAGAAACCCACA+AGG | 0.680437 | 7.4:+18320936 | MS.gene39118:CDS |
| GCCAATGGCTTGATGCAACG+AGG | 0.680502 | 7.4:-18323790 | None:intergenic |
| GCACTCCATATAACGACATG+AGG | 0.680853 | 7.4:-18321848 | None:intergenic |
| TGTTGGTGTAGTGAAGACAT+TGG | 0.691529 | 7.4:+18321481 | MS.gene39118:CDS |
| TCTAGCATACTGGTAACCGA+AGG | 0.694305 | 7.4:+18324056 | MS.gene39118:CDS |
| TTGACAGTACTAGACAAACT+GGG | 0.701488 | 7.4:-18323678 | None:intergenic |
| TCATGTCGTTATATGGAGTG+CGG | 0.711090 | 7.4:+18321850 | MS.gene39118:CDS |
| GGTTTGTGACTCGAATTCGG+AGG | 0.722161 | 7.4:+18321355 | MS.gene39118:CDS |
| TATGATACTGAAAATCACGA+GGG | 0.723979 | 7.4:-18323959 | None:intergenic |
| TCCATCCAAGAAACCCACAA+GGG | 0.741748 | 7.4:+18320937 | MS.gene39118:CDS |
| AAGTAGTTAAGACATCTAGG+AGG | 0.742405 | 7.4:-18321818 | None:intergenic |
| TGTAACCCGGAACTACACAA+GGG | 0.759800 | 7.4:+18321269 | MS.gene39118:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAACACTAAATTACA+TGG | - | chr7.4:18322264-18322283 | None:intergenic | 15.0% |
| !! | TGTTTAATAATGATTAGATA+AGG | + | chr7.4:18322953-18322972 | MS.gene39118:intron | 15.0% |
| !!! | TATAAATTTTCTTAGTACAA+AGG | - | chr7.4:18322201-18322220 | None:intergenic | 15.0% |
| !!! | TTAATTTGAATAAGTGTAAA+TGG | + | chr7.4:18322680-18322699 | MS.gene39118:intron | 15.0% |
| !! | AATAATGATTAGATAAGGTA+TGG | + | chr7.4:18322958-18322977 | MS.gene39118:intron | 20.0% |
| !! | TTAGTGTTTATTTATCTACT+TGG | + | chr7.4:18322270-18322289 | MS.gene39118:intron | 20.0% |
| !!! | AAAATGTTGATTTGATTTCT+TGG | + | chr7.4:18323823-18323842 | MS.gene39118:CDS | 20.0% |
| !!! | AATTTCACAATTTGCTTTTA+TGG | - | chr7.4:18323571-18323590 | None:intergenic | 20.0% |
| !!! | AGTATTAGATAGAAGTATTA+TGG | - | chr7.4:18322400-18322419 | None:intergenic | 20.0% |
| !!! | GTATTAGATAGAAGTATTAT+GGG | - | chr7.4:18322399-18322418 | None:intergenic | 20.0% |
| !!! | TGATATTTCAACAAAGTTTT+GGG | - | chr7.4:18323304-18323323 | None:intergenic | 20.0% |
| !!! | TTGATATTTCAACAAAGTTT+TGG | - | chr7.4:18323305-18323324 | None:intergenic | 20.0% |
| !!! | TTGCAATTTTTTGATCAAAT+GGG | + | chr7.4:18321626-18321645 | MS.gene39118:CDS | 20.0% |
| !!! | TTGTCAATAATCATTTTGTA+AGG | + | chr7.4:18322332-18322351 | MS.gene39118:intron | 20.0% |
| ! | AAAGAGTTTGTAAGAACTTA+TGG | + | chr7.4:18322128-18322147 | MS.gene39118:CDS | 25.0% |
| ! | ACTCTGTATGATTGAAAAAA+TGG | + | chr7.4:18322293-18322312 | MS.gene39118:intron | 25.0% |
| ! | AGATCTTTATGATGTTGAAT+TGG | + | chr7.4:18321142-18321161 | MS.gene39118:CDS | 25.0% |
| ! | AGGTAATATACATATATCCA+TGG | + | chr7.4:18322168-18322187 | MS.gene39118:intron | 25.0% |
| ! | ATGACTGAGTAAACATATAT+AGG | - | chr7.4:18323081-18323100 | None:intergenic | 25.0% |
| ! | CAAATATTTCAACTCTTGTT+AGG | + | chr7.4:18320861-18320880 | MS.gene39118:CDS | 25.0% |
| ! | GATGCATATAAAAGGATAAA+GGG | - | chr7.4:18322851-18322870 | None:intergenic | 25.0% |
| ! | TACACAATCAAAATCCATAT+TGG | - | chr7.4:18322435-18322454 | None:intergenic | 25.0% |
| ! | TGGATATATGTATATTACCT+TGG | - | chr7.4:18322168-18322187 | None:intergenic | 25.0% |
| ! | TGTTGAAATATCAATGTTCT+TGG | + | chr7.4:18323311-18323330 | MS.gene39118:intron | 25.0% |
| !! | ATCTATTATAAGTGCTATTG+TGG | + | chr7.4:18321550-18321569 | MS.gene39118:CDS | 25.0% |
| !! | CTGATCAATTTTATCCAATA+TGG | + | chr7.4:18322418-18322437 | MS.gene39118:intron | 25.0% |
| !! | TGCATTTTCACAAAAAGTTT+AGG | + | chr7.4:18323373-18323392 | MS.gene39118:intron | 25.0% |
| !!! | GTTGCAATTTTTTGATCAAA+TGG | + | chr7.4:18321625-18321644 | MS.gene39118:CDS | 25.0% |
| !!! | TTTTTAGGTGATCTAGATTT+GGG | - | chr7.4:18322726-18322745 | None:intergenic | 25.0% |
| AAATCAAGACACCTATTTGA+AGG | - | chr7.4:18324152-18324171 | None:intergenic | 30.0% | |
| AACTCTTTCAATCTCAAAAG+TGG | - | chr7.4:18322116-18322135 | None:intergenic | 30.0% | |
| AAGACTGAAAAGATTCCTAA+TGG | + | chr7.4:18324089-18324108 | MS.gene39118:CDS | 30.0% | |
| AATTGAAACCCTTTCTATCA+TGG | + | chr7.4:18320913-18320932 | MS.gene39118:CDS | 30.0% | |
| ACATTAAACACAATCCCATT+AGG | - | chr7.4:18324107-18324126 | None:intergenic | 30.0% | |
| ACCTAAATTTCGAACAAGAT+CGG | - | chr7.4:18321243-18321262 | None:intergenic | 30.0% | |
| AGACTGAAAAGATTCCTAAT+GGG | + | chr7.4:18324090-18324109 | MS.gene39118:CDS | 30.0% | |
| AGATCTGATTCATTCATCTT+TGG | - | chr7.4:18321128-18321147 | None:intergenic | 30.0% | |
| AGATTAAAAGGAGGATGATA+AGG | - | chr7.4:18321953-18321972 | None:intergenic | 30.0% | |
| ATTATACAGAACCCTTCTTA+TGG | + | chr7.4:18323489-18323508 | MS.gene39118:CDS | 30.0% | |
| ATTCTTGTATAGGTTTAGAG+GGG | + | chr7.4:18320884-18320903 | MS.gene39118:CDS | 30.0% | |
| CATAAGCTTCTTGAAATGTA+AGG | - | chr7.4:18321745-18321764 | None:intergenic | 30.0% | |
| GATCATATTAGTAATGAAGC+TGG | + | chr7.4:18320744-18320763 | MS.gene39118:CDS | 30.0% | |
| GATTCTTGTATAGGTTTAGA+GGG | + | chr7.4:18320883-18320902 | MS.gene39118:CDS | 30.0% | |
| GGATGCATATAAAAGGATAA+AGG | - | chr7.4:18322852-18322871 | None:intergenic | 30.0% | |
| TAAAACATAAACTCTTGCCT+AGG | + | chr7.4:18321504-18321523 | MS.gene39118:CDS | 30.0% | |
| TACAGAGCTTCTATTTAGTT+CGG | - | chr7.4:18323928-18323947 | None:intergenic | 30.0% | |
| TACCATACTATTTGAACACT+TGG | - | chr7.4:18323246-18323265 | None:intergenic | 30.0% | |
| TATGATACTGAAAATCACGA+GGG | - | chr7.4:18323962-18323981 | None:intergenic | 30.0% | |
| TCAATTCTTGAGCTTCAAAA+AGG | - | chr7.4:18321901-18321920 | None:intergenic | 30.0% | |
| TCTTGTTAGGATTCTTGTAT+AGG | + | chr7.4:18320874-18320893 | MS.gene39118:CDS | 30.0% | |
| TGATTATTGACAACTATCGA+TGG | - | chr7.4:18322325-18322344 | None:intergenic | 30.0% | |
| TTACACAAATGTGAAAGCTA+GGG | + | chr7.4:18321001-18321020 | MS.gene39118:CDS | 30.0% | |
| TTGATTTCTTGGACTAAATC+TGG | + | chr7.4:18323834-18323853 | MS.gene39118:CDS | 30.0% | |
| TTTAGGTAATATGTGTAACC+CGG | + | chr7.4:18321256-18321275 | MS.gene39118:CDS | 30.0% | |
| TTTATGATGTTGAATTGGTG+AGG | + | chr7.4:18321147-18321166 | MS.gene39118:CDS | 30.0% | |
| ! | ATGAAACAAGACATGCTTTT+GGG | + | chr7.4:18321411-18321430 | MS.gene39118:CDS | 30.0% |
| ! | TATCATCCTCCTTTTAATCT+AGG | + | chr7.4:18321953-18321972 | MS.gene39118:CDS | 30.0% |
| ! | TCAAATAGGTGTCTTGATTT+TGG | + | chr7.4:18324152-18324171 | MS.gene39118:CDS | 30.0% |
| !! | TGATCTAGATTTGGGTTTTT+AGG | - | chr7.4:18322718-18322737 | None:intergenic | 30.0% |
| !!! | CAATTTTTTGATCAAATGGG+CGG | + | chr7.4:18321629-18321648 | MS.gene39118:CDS | 30.0% |
| !!! | GTTTTTAGGTGATCTAGATT+TGG | - | chr7.4:18322727-18322746 | None:intergenic | 30.0% |
| !!! | TTTTGAAGCTCAAGAATTGA+TGG | + | chr7.4:18321901-18321920 | MS.gene39118:CDS | 30.0% |
| AAGCCTTAACACCTTCAAAT+AGG | + | chr7.4:18324138-18324157 | MS.gene39118:CDS | 35.0% | |
| AAGTAGTTAAGACATCTAGG+AGG | - | chr7.4:18321821-18321840 | None:intergenic | 35.0% | |
| AATGACCAAGTTCACACTAT+AGG | - | chr7.4:18323144-18323163 | None:intergenic | 35.0% | |
| AATTCCTTCATGGAATTGCA+TGG | + | chr7.4:18323719-18323738 | MS.gene39118:CDS | 35.0% | |
| AGAATCAGAGCTAACAGTAT+CGG | - | chr7.4:18324249-18324268 | None:intergenic | 35.0% | |
| AGGAAAGGGATGCATATAAA+AGG | - | chr7.4:18322859-18322878 | None:intergenic | 35.0% | |
| AGGTACTCCTTGATTAACTT+AGG | - | chr7.4:18321308-18321327 | None:intergenic | 35.0% | |
| AGGTAGAGTTCTTGGAATTA+CGG | + | chr7.4:18321772-18321791 | MS.gene39118:CDS | 35.0% | |
| AGTCTTCAAAAGATCACCTT+CGG | - | chr7.4:18324075-18324094 | None:intergenic | 35.0% | |
| AGTTCACACTATAGGAAAGA+AGG | - | chr7.4:18323136-18323155 | None:intergenic | 35.0% | |
| ATATAGAACATACCTGAGCA+AGG | - | chr7.4:18322593-18322612 | None:intergenic | 35.0% | |
| ATCAATGCTAATATCCCTTG+TGG | - | chr7.4:18320954-18320973 | None:intergenic | 35.0% | |
| ATTAGATAAGGTATGGAGAG+GGG | + | chr7.4:18322965-18322984 | MS.gene39118:intron | 35.0% | |
| ATTAGTAATGAAGCTGGTGT+AGG | + | chr7.4:18320750-18320769 | MS.gene39118:CDS | 35.0% | |
| ATTTCTTGGACTAAATCTGG+TGG | + | chr7.4:18323837-18323856 | MS.gene39118:CDS | 35.0% | |
| CAAACTGTTTGCTCAAGAAT+GGG | + | chr7.4:18322536-18322555 | MS.gene39118:CDS | 35.0% | |
| CAAGAAGCTTATGATATGAC+AGG | + | chr7.4:18321752-18321771 | MS.gene39118:CDS | 35.0% | |
| CAATCATTTCATTGTCAGTC+AGG | + | chr7.4:18322073-18322092 | MS.gene39118:CDS | 35.0% | |
| CTATGATACTGAAAATCACG+AGG | - | chr7.4:18323963-18323982 | None:intergenic | 35.0% | |
| CTTAGGCTGGATATGATAAA+GGG | - | chr7.4:18323034-18323053 | None:intergenic | 35.0% | |
| CTTCAAGAAGAATTCCTTCA+TGG | + | chr7.4:18323709-18323728 | MS.gene39118:CDS | 35.0% | |
| GAGTTTGTAAGAACTTATGG+AGG | + | chr7.4:18322131-18322150 | MS.gene39118:CDS | 35.0% | |
| GATTAGATAAGGTATGGAGA+GGG | + | chr7.4:18322964-18322983 | MS.gene39118:intron | 35.0% | |
| GCATATAAAAGGATAAAGGG+CGG | - | chr7.4:18322848-18322867 | None:intergenic | 35.0% | |
| GGATTCTTGTATAGGTTTAG+AGG | + | chr7.4:18320882-18320901 | MS.gene39118:CDS | 35.0% | |
| GGTACTCCTTGATTAACTTA+GGG | - | chr7.4:18321307-18321326 | None:intergenic | 35.0% | |
| GTCAAGTAGTTAAGACATCT+AGG | - | chr7.4:18321824-18321843 | None:intergenic | 35.0% | |
| GTCATTTAGACCAAACTGTT+TGG | + | chr7.4:18323158-18323177 | MS.gene39118:intron | 35.0% | |
| GTTACACAAATGTGAAAGCT+AGG | + | chr7.4:18321000-18321019 | MS.gene39118:CDS | 35.0% | |
| GTTGTTGAGTGTGATCAAAT+TGG | + | chr7.4:18324206-18324225 | MS.gene39118:CDS | 35.0% | |
| TACACTATTCCAGAAACACT+AGG | - | chr7.4:18322807-18322826 | None:intergenic | 35.0% | |
| TAGTAAAATGCCGTAACACA+GGG | - | chr7.4:18323104-18323123 | None:intergenic | 35.0% | |
| TATAGAACATACCTGAGCAA+GGG | - | chr7.4:18322592-18322611 | None:intergenic | 35.0% | |
| TATCATAGTTTCAGACTCAC+AGG | + | chr7.4:18323975-18323994 | MS.gene39118:CDS | 35.0% | |
| TCAAGTCCCTAAGTTAATCA+AGG | + | chr7.4:18321298-18321317 | MS.gene39118:CDS | 35.0% | |
| TCAATGCTAATATCCCTTGT+GGG | - | chr7.4:18320953-18320972 | None:intergenic | 35.0% | |
| TCTTAGGCTGGATATGATAA+AGG | - | chr7.4:18323035-18323054 | None:intergenic | 35.0% | |
| TCTTTCCTATAGTGTGAACT+TGG | + | chr7.4:18323136-18323155 | MS.gene39118:intron | 35.0% | |
| TGATTAGATAAGGTATGGAG+AGG | + | chr7.4:18322963-18322982 | MS.gene39118:intron | 35.0% | |
| TGCTTTGACCTATGATGAAT+GGG | + | chr7.4:18321070-18321089 | MS.gene39118:CDS | 35.0% | |
| TGGTAAGACAATAGCTTTCA+GGG | + | chr7.4:18320803-18320822 | MS.gene39118:CDS | 35.0% | |
| TGTAACCAAGTACTAGAACT+TGG | + | chr7.4:18322492-18322511 | MS.gene39118:CDS | 35.0% | |
| TTAGGCTGGATATGATAAAG+GGG | - | chr7.4:18323033-18323052 | None:intergenic | 35.0% | |
| TTATATGCATCCCTTTCCTA+AGG | + | chr7.4:18322860-18322879 | MS.gene39118:intron | 35.0% | |
| TTGACAGTACTAGACAAACT+GGG | - | chr7.4:18323681-18323700 | None:intergenic | 35.0% | |
| TTGGTAAGACAATAGCTTTC+AGG | + | chr7.4:18320802-18320821 | MS.gene39118:CDS | 35.0% | |
| TTTGACAGTACTAGACAAAC+TGG | - | chr7.4:18323682-18323701 | None:intergenic | 35.0% | |
| ! | AATGGTTTGTGACTCGAATT+CGG | + | chr7.4:18321352-18321371 | MS.gene39118:CDS | 35.0% |
| ! | CATGAAACAAGACATGCTTT+TGG | + | chr7.4:18321410-18321429 | MS.gene39118:CDS | 35.0% |
| ! | CTTATGCACTGAAGTATCAT+TGG | - | chr7.4:18323420-18323439 | None:intergenic | 35.0% |
| ! | TGGCTTATAGGAGGAAATTT+TGG | + | chr7.4:18321030-18321049 | MS.gene39118:CDS | 35.0% |
| ! | TTGATGGCAAAGAATAGAAG+TGG | + | chr7.4:18321917-18321936 | MS.gene39118:CDS | 35.0% |
| !! | AACATAAAGAGAGTGTTCGA+TGG | - | chr7.4:18322937-18322956 | None:intergenic | 35.0% |
| !! | ACACCTATTTGAAGGTGTTA+AGG | - | chr7.4:18324144-18324163 | None:intergenic | 35.0% |
| !! | ACATAAAGAGAGTGTTCGAT+GGG | - | chr7.4:18322936-18322955 | None:intergenic | 35.0% |
| !! | AGAACAGCTTTGCTTTTAAG+TGG | + | chr7.4:18321434-18321453 | MS.gene39118:CDS | 35.0% |
| !! | ATAATTGCTGGTTCAAGTGT+TGG | + | chr7.4:18321527-18321546 | MS.gene39118:CDS | 35.0% |
| !! | GGTATCGACTCAATTGAAAA+TGG | + | chr7.4:18321334-18321353 | MS.gene39118:CDS | 35.0% |
| !!! | CAACAAAGTTTTGGGTTCAA+AGG | - | chr7.4:18323296-18323315 | None:intergenic | 35.0% |
| AACAAACGTATTTGCCGAAG+CGG | - | chr7.4:18323877-18323896 | None:intergenic | 40.0% | |
| AATATCCCTTGTGGGTTTCT+TGG | - | chr7.4:18320945-18320964 | None:intergenic | 40.0% | |
| ACGAGGAAGAAACTTCTGTA+AGG | - | chr7.4:18323776-18323795 | None:intergenic | 40.0% | |
| ACTTGCTCTTGATGAATCTG+TGG | + | chr7.4:18323593-18323612 | MS.gene39118:CDS | 40.0% | |
| AGAATGTCTGAAGGACCAAT+TGG | - | chr7.4:18320783-18320802 | None:intergenic | 40.0% | |
| AGCAGAAGGAAATTGACAAC+AGG | + | chr7.4:18324021-18324040 | MS.gene39118:CDS | 40.0% | |
| AGTACAAAGGTTCAAGTCCA+TGG | - | chr7.4:18322188-18322207 | None:intergenic | 40.0% | |
| ATCCAGCCTAAGAGTTATAC+AGG | + | chr7.4:18323042-18323061 | MS.gene39118:intron | 40.0% | |
| ATTGACAACAGGGTTGTGAA+TGG | + | chr7.4:18324032-18324051 | MS.gene39118:CDS | 40.0% | |
| ATTGAGTCGATACCTCATCA+AGG | - | chr7.4:18321328-18321347 | None:intergenic | 40.0% | |
| ATTGGTCCTTCAGACATTCT+TGG | + | chr7.4:18320783-18320802 | MS.gene39118:CDS | 40.0% | |
| CCAAACTGTTTGCTCAAGAA+TGG | + | chr7.4:18322535-18322554 | MS.gene39118:CDS | 40.0% | |
| CCATTCTTGAGCAAACAGTT+TGG | - | chr7.4:18322538-18322557 | None:intergenic | 40.0% | |
| CTAGTAAAATGCCGTAACAC+AGG | - | chr7.4:18323105-18323124 | None:intergenic | 40.0% | |
| CTGAAGGACCAATTGGAAAA+CGG | - | chr7.4:18320776-18320795 | None:intergenic | 40.0% | |
| CTGTTCAGTACCAAACAGTT+TGG | - | chr7.4:18323171-18323190 | None:intergenic | 40.0% | |
| CTTGAACCAGCAATTATCCT+AGG | - | chr7.4:18321524-18321543 | None:intergenic | 40.0% | |
| GAATTCGGAGGAGTTATCTT+TGG | + | chr7.4:18321367-18321386 | MS.gene39118:CDS | 40.0% | |
| GATATGACAGGTAGAGTTCT+TGG | + | chr7.4:18321764-18321783 | MS.gene39118:CDS | 40.0% | |
| GCAGAAGGAAATTGACAACA+GGG | + | chr7.4:18324022-18324041 | MS.gene39118:CDS | 40.0% | |
| GCCGATCTTGTTCGAAATTT+AGG | + | chr7.4:18321239-18321258 | MS.gene39118:CDS | 40.0% | |
| GGATGGAACCATGATAGAAA+GGG | - | chr7.4:18320924-18320943 | None:intergenic | 40.0% | |
| GGCCAAGTGTTCAAATAGTA+TGG | + | chr7.4:18323241-18323260 | MS.gene39118:intron | 40.0% | |
| GTCTTACCAAGAATGTCTGA+AGG | - | chr7.4:18320792-18320811 | None:intergenic | 40.0% | |
| GTGATCAAATTGGTTGTCCA+GGG | + | chr7.4:18324216-18324235 | MS.gene39118:CDS | 40.0% | |
| GTGCTTTGACCTATGATGAA+TGG | + | chr7.4:18321069-18321088 | MS.gene39118:CDS | 40.0% | |
| TAAGAGTTATACAGGCTGGT+CGG | + | chr7.4:18323050-18323069 | MS.gene39118:intron | 40.0% | |
| TAGATCACCGTCTCCATTTA+GGG | + | chr7.4:18322754-18322773 | MS.gene39118:intron | 40.0% | |
| TAGGCTGGATATGATAAAGG+GGG | - | chr7.4:18323032-18323051 | None:intergenic | 40.0% | |
| TCAAAAGTGGTGCAATGTGA+GGG | - | chr7.4:18322103-18322122 | None:intergenic | 40.0% | |
| TCAGATTCTGAGTTCCTATC+TGG | - | chr7.4:18324002-18324021 | None:intergenic | 40.0% | |
| TCATGTCGTTATATGGAGTG+CGG | + | chr7.4:18321850-18321869 | MS.gene39118:CDS | 40.0% | |
| TCTTCGGGACCTAGATTAAA+AGG | - | chr7.4:18321965-18321984 | None:intergenic | 40.0% | |
| TGACTTTCTCCGAAACTTAG+AGG | + | chr7.4:18323896-18323915 | MS.gene39118:CDS | 40.0% | |
| TGAGTGACACTCTTAATTGG+AGG | + | chr7.4:18322777-18322796 | MS.gene39118:intron | 40.0% | |
| TGGATGGAACCATGATAGAA+AGG | - | chr7.4:18320925-18320944 | None:intergenic | 40.0% | |
| TGTGAATGGATCTAGCATAC+TGG | + | chr7.4:18324046-18324065 | MS.gene39118:CDS | 40.0% | |
| TGTGATCAAATTGGTTGTCC+AGG | + | chr7.4:18324215-18324234 | MS.gene39118:CDS | 40.0% | |
| TGTTGGTGTAGTGAAGACAT+TGG | + | chr7.4:18321481-18321500 | MS.gene39118:CDS | 40.0% | |
| TTCTTATGGCGAGCTTCAAA+AGG | + | chr7.4:18323503-18323522 | MS.gene39118:CDS | 40.0% | |
| TTTAATCTAGGTCCCGAAGA+AGG | + | chr7.4:18321965-18321984 | MS.gene39118:CDS | 40.0% | |
| ! | AGCTTAGAGATTGACTTACC+TGG | + | chr7.4:18322019-18322038 | MS.gene39118:CDS | 40.0% |
| ! | AGTTTTTGCGGTTGTCAAGA+GGG | + | chr7.4:18321652-18321671 | MS.gene39118:CDS | 40.0% |
| ! | ATTTTCAGAGTCACTGCCAA+TGG | - | chr7.4:18323808-18323827 | None:intergenic | 40.0% |
| ! | CAAACTGTTTGGTACTGAAC+AGG | + | chr7.4:18323169-18323188 | MS.gene39118:intron | 40.0% |
| ! | GAAAGCCAAGTTCTAGTACT+TGG | - | chr7.4:18322500-18322519 | None:intergenic | 40.0% |
| ! | GTGCGGATTCATCATTTTCA+TGG | - | chr7.4:18324274-18324293 | None:intergenic | 40.0% |
| ! | TTTGAAGCTCGCCATAAGAA+GGG | - | chr7.4:18323503-18323522 | None:intergenic | 40.0% |
| !! | AATCAAGGAGTACCTTGATG+AGG | + | chr7.4:18321313-18321332 | MS.gene39118:CDS | 40.0% |
| !! | ACAGCTTTGCTTTTAAGTGG+TGG | + | chr7.4:18321437-18321456 | MS.gene39118:CDS | 40.0% |
| !! | CATAAAGAGAGTGTTCGATG+GGG | - | chr7.4:18322935-18322954 | None:intergenic | 40.0% |
| !! | TCTCTAGGAGCTTTTCATGT+TGG | + | chr7.4:18321464-18321483 | MS.gene39118:CDS | 40.0% |
| !! | TGAGTACTGAAACAAGAGAC+AGG | - | chr7.4:18323466-18323485 | None:intergenic | 40.0% |
| !!! | TTTTGAAGCTCGCCATAAGA+AGG | - | chr7.4:18323504-18323523 | None:intergenic | 40.0% |
| AAAGAGAGGGTCCAAACCTT+AGG | - | chr7.4:18322879-18322898 | None:intergenic | 45.0% | |
| AAGGACTTGGACGCTTTAGT+TGG | + | chr7.4:18323220-18323239 | MS.gene39118:intron | 45.0% | |
| ACTCAGTCATCCCTGTGTTA+CGG | + | chr7.4:18323091-18323110 | MS.gene39118:intron | 45.0% | |
| AGAGCTTCAGAGTTTCTTCG+AGG | + | chr7.4:18321589-18321608 | MS.gene39118:CDS | 45.0% | |
| AGCCTAAGAGTTATACAGGC+TGG | + | chr7.4:18323046-18323065 | MS.gene39118:intron | 45.0% | |
| AGCCTGTATAACTCTTAGGC+TGG | - | chr7.4:18323047-18323066 | None:intergenic | 45.0% | |
| AGGGTCCAAACCTTAGGAAA+GGG | - | chr7.4:18322873-18322892 | None:intergenic | 45.0% | |
| AGTTTGGCAAGTCCACCTAA+GGG | - | chr7.4:18322522-18322541 | None:intergenic | 45.0% | |
| ATGATAAAGGGGGTTCGACT+GGG | - | chr7.4:18323022-18323041 | None:intergenic | 45.0% | |
| ATGGCACGAGAGAATTCATC+AGG | + | chr7.4:18323738-18323757 | MS.gene39118:CDS | 45.0% | |
| CATCGCCTCATGTCGTTATA+TGG | + | chr7.4:18321843-18321862 | MS.gene39118:CDS | 45.0% | |
| CGGAGTCAACCTCTAAGTTT+CGG | - | chr7.4:18323908-18323927 | None:intergenic | 45.0% | |
| CGTTATATGGAGTGCGGTAA+CGG | + | chr7.4:18321856-18321875 | MS.gene39118:CDS | 45.0% | |
| CTAGATCACCGTCTCCATTT+AGG | + | chr7.4:18322753-18322772 | MS.gene39118:intron | 45.0% | |
| CTAGGGCTGAAATGGCTTAT+AGG | + | chr7.4:18321018-18321037 | MS.gene39118:CDS | 45.0% | |
| CTATTGTGGCCACTAGATCA+TGG | + | chr7.4:18321564-18321583 | MS.gene39118:CDS | 45.0% | |
| CTCAAAAGTGGTGCAATGTG+AGG | - | chr7.4:18322104-18322123 | None:intergenic | 45.0% | |
| CTCTTGCCTAGGATAATTGC+TGG | + | chr7.4:18321515-18321534 | MS.gene39118:CDS | 45.0% | |
| CTGTTTGCTCAAGAATGGGA+AGG | + | chr7.4:18322540-18322559 | MS.gene39118:CDS | 45.0% | |
| CTTGAGCTTCAAAAAGGCCA+GGG | - | chr7.4:18321895-18321914 | None:intergenic | 45.0% | |
| CTTTCAACTGCATCATAGCC+AGG | - | chr7.4:18322040-18322059 | None:intergenic | 45.0% | |
| CTTTGATCCATGCTCATAGC+TGG | - | chr7.4:18324296-18324315 | None:intergenic | 45.0% | |
| GAACTCAGAATCTGAGCAGA+AGG | + | chr7.4:18324007-18324026 | MS.gene39118:CDS | 45.0% | |
| GACCAGCCTGTATAACTCTT+AGG | - | chr7.4:18323051-18323070 | None:intergenic | 45.0% | |
| GCACTCCATATAACGACATG+AGG | - | chr7.4:18321851-18321870 | None:intergenic | 45.0% | |
| GGAGACGGTGATCTAGATTT+GGG | - | chr7.4:18322749-18322768 | None:intergenic | 45.0% | |
| GGAGGATAACCTAGTGTTTC+TGG | + | chr7.4:18322795-18322814 | MS.gene39118:intron | 45.0% | |
| GGCAGTTGCAAATGTTGTTG+AGG | + | chr7.4:18321705-18321724 | MS.gene39118:CDS | 45.0% | |
| GGGTGAGTGACACTCTTAAT+TGG | + | chr7.4:18322774-18322793 | MS.gene39118:intron | 45.0% | |
| TATGATAAAGGGGGTTCGAC+TGG | - | chr7.4:18323023-18323042 | None:intergenic | 45.0% | |
| TCAAATTGGTTGTCCAGGGA+AGG | + | chr7.4:18324220-18324239 | MS.gene39118:CDS | 45.0% | |
| TCACTCACCCTAAATGGAGA+CGG | - | chr7.4:18322764-18322783 | None:intergenic | 45.0% | |
| TCCATCCAAGAAACCCACAA+GGG | + | chr7.4:18320937-18320956 | MS.gene39118:CDS | 45.0% | |
| TCCATGAGCCCATTCATCAT+AGG | - | chr7.4:18321081-18321100 | None:intergenic | 45.0% | |
| TCGGGACCTAGATTAAAAGG+AGG | - | chr7.4:18321962-18321981 | None:intergenic | 45.0% | |
| TCTAGCATACTGGTAACCGA+AGG | + | chr7.4:18324056-18324075 | MS.gene39118:CDS | 45.0% | |
| TCTTGAGCTTCAAAAAGGCC+AGG | - | chr7.4:18321896-18321915 | None:intergenic | 45.0% | |
| TGCATCCCTTTCCTAAGGTT+TGG | + | chr7.4:18322865-18322884 | MS.gene39118:intron | 45.0% | |
| TGGAGACGGTGATCTAGATT+TGG | - | chr7.4:18322750-18322769 | None:intergenic | 45.0% | |
| TGTAACCCGGAACTACACAA+GGG | + | chr7.4:18321269-18321288 | MS.gene39118:CDS | 45.0% | |
| TGTGAAAGCTAGGGCTGAAA+TGG | + | chr7.4:18321010-18321029 | MS.gene39118:CDS | 45.0% | |
| TTCAAAAGGCAGCCAACCAA+GGG | + | chr7.4:18323517-18323536 | MS.gene39118:CDS | 45.0% | |
| TTCCATCCAAGAAACCCACA+AGG | + | chr7.4:18320936-18320955 | MS.gene39118:CDS | 45.0% | |
| TTGGACCTGACGAAAAGAGA+GGG | - | chr7.4:18322892-18322911 | None:intergenic | 45.0% | |
| ! | ACCTATGATGAATGGGCTCA+TGG | + | chr7.4:18321077-18321096 | MS.gene39118:CDS | 45.0% |
| ! | ACTAAAGCGTCCAAGTCCTT+TGG | - | chr7.4:18323220-18323239 | None:intergenic | 45.0% |
| ! | AGAGTGTCACTCACCCTAAA+TGG | - | chr7.4:18322770-18322789 | None:intergenic | 45.0% |
| ! | CTAAAGCGTCCAAGTCCTTT+GGG | - | chr7.4:18323219-18323238 | None:intergenic | 45.0% |
| ! | CTAGAACTTGGCTTTCCCTT+AGG | + | chr7.4:18322504-18322523 | MS.gene39118:CDS | 45.0% |
| ! | GAATTACGGTTTGCTCTCCA+AGG | + | chr7.4:18321786-18321805 | MS.gene39118:CDS | 45.0% |
| ! | GAGTTTTTGCGGTTGTCAAG+AGG | + | chr7.4:18321651-18321670 | MS.gene39118:CDS | 45.0% |
| ! | TCAAATGGGCGGAGTTTTTG+CGG | + | chr7.4:18321640-18321659 | MS.gene39118:CDS | 45.0% |
| ! | TGGTGTTGGAGGTGAAACAT+AGG | + | chr7.4:18322469-18322488 | MS.gene39118:CDS | 45.0% |
| ! | TTAAGTGGTGGTGCTTCTCT+AGG | + | chr7.4:18321449-18321468 | MS.gene39118:CDS | 45.0% |
| !! | TCGAAGAAACTCTGAAGCTC+TGG | - | chr7.4:18321590-18321609 | None:intergenic | 45.0% |
| AAGTGGTGCAATGTGAGGGT+TGG | - | chr7.4:18322099-18322118 | None:intergenic | 50.0% | |
| ACCAAGGGAGAAGATGTAGC+TGG | + | chr7.4:18323532-18323551 | MS.gene39118:CDS | 50.0% | |
| AGCCTACCCTTGTGTAGTTC+CGG | - | chr7.4:18321278-18321297 | None:intergenic | 50.0% | |
| AGCTTCAAAAAGGCCAGGGA+AGG | - | chr7.4:18321891-18321910 | None:intergenic | 50.0% | |
| AGTCCTTTGGGCTTGACACT+CGG | - | chr7.4:18323207-18323226 | None:intergenic | 50.0% | |
| AGTGTCAAGCCCAAAGGACT+TGG | + | chr7.4:18323207-18323226 | MS.gene39118:intron | 50.0% | |
| ATCCATGCTCATAGCTGGTG+CGG | - | chr7.4:18324291-18324310 | None:intergenic | 50.0% | |
| CAGTTTGGCAAGTCCACCTA+AGG | - | chr7.4:18322523-18322542 | None:intergenic | 50.0% | |
| CCAAGGGAGAAGATGTAGCT+GGG | + | chr7.4:18323533-18323552 | MS.gene39118:CDS | 50.0% | |
| CCCTTTGATGAGAACCGCTT+CGG | + | chr7.4:18323860-18323879 | MS.gene39118:CDS | 50.0% | |
| CCGAAGCGGTTCTCATCAAA+GGG | - | chr7.4:18323863-18323882 | None:intergenic | 50.0% | |
| CGTGCCATGCAATTCCATGA+AGG | - | chr7.4:18323726-18323745 | None:intergenic | 50.0% | |
| CTAAGCTACCATCCCTCCAA+CGG | - | chr7.4:18322006-18322025 | None:intergenic | 50.0% | |
| CTACGTAGTCGTCGACAAGA+GGG | + | chr7.4:18321185-18321204 | MS.gene39118:CDS | 50.0% | |
| CTTCAAAAGGCAGCCAACCA+AGG | + | chr7.4:18323516-18323535 | MS.gene39118:CDS | 50.0% | |
| GAGGGTCCAAACCTTAGGAA+AGG | - | chr7.4:18322874-18322893 | None:intergenic | 50.0% | |
| GCTACATCTTCTCCCTTGGT+TGG | - | chr7.4:18323532-18323551 | None:intergenic | 50.0% | |
| GGGCTGAAATGGCTTATAGG+AGG | + | chr7.4:18321021-18321040 | MS.gene39118:CDS | 50.0% | |
| GGTTTGTGACTCGAATTCGG+AGG | + | chr7.4:18321355-18321374 | MS.gene39118:CDS | 50.0% | |
| GTCAGGTCCAACCCCAATTT+GGG | + | chr7.4:18322901-18322920 | MS.gene39118:intron | 50.0% | |
| GTGTAACCCGGAACTACACA+AGG | + | chr7.4:18321268-18321287 | MS.gene39118:CDS | 50.0% | |
| GTTGGACCTGACGAAAAGAG+AGG | - | chr7.4:18322893-18322912 | None:intergenic | 50.0% | |
| GTTTCACCTCCAACACCACA+AGG | - | chr7.4:18322467-18322486 | None:intergenic | 50.0% | |
| TCAGACTCACAGGACCAGAT+AGG | + | chr7.4:18323985-18324004 | MS.gene39118:CDS | 50.0% | |
| TCCCTTGTGGGTTTCTTGGA+TGG | - | chr7.4:18320941-18320960 | None:intergenic | 50.0% | |
| TCCTCGTTGCATCAAGCCAT+TGG | + | chr7.4:18323789-18323808 | MS.gene39118:CDS | 50.0% | |
| ! | AAGCTCTGGCCATGATCTAG+TGG | - | chr7.4:18321576-18321595 | None:intergenic | 50.0% |
| ! | GAACTTGGCTTTCCCTTAGG+TGG | + | chr7.4:18322507-18322526 | MS.gene39118:CDS | 50.0% |
| ! | TTGGACCCTCTCTTTTCGTC+AGG | + | chr7.4:18322884-18322903 | MS.gene39118:intron | 50.0% |
| !! | ACAGTATCGGTTTCCTTCCC+TGG | - | chr7.4:18324236-18324255 | None:intergenic | 50.0% |
| !! | GGTGTAGGCCGTTTTCCAAT+TGG | + | chr7.4:18320765-18320784 | MS.gene39118:CDS | 50.0% |
| !! | TGTGTAGCTTGCTCACCTTG+TGG | + | chr7.4:18322449-18322468 | MS.gene39118:intron | 50.0% |
| AAAGGGGGTTCGACTGGGTA+AGG | - | chr7.4:18323017-18323036 | None:intergenic | 55.0% | |
| AAGGGGGTTCGACTGGGTAA+GGG | - | chr7.4:18323016-18323035 | None:intergenic | 55.0% | |
| ACCCGGAACTACACAAGGGT+AGG | + | chr7.4:18321273-18321292 | MS.gene39118:CDS | 55.0% | |
| ATCCGCACCAGCTATGAGCA+TGG | + | chr7.4:18324286-18324305 | MS.gene39118:CDS | 55.0% | |
| CATACCTGAGCAAGGGTAGC+AGG | - | chr7.4:18322585-18322604 | None:intergenic | 55.0% | |
| CCAACCCCAATTTGGGTGCA+TGG | + | chr7.4:18322908-18322927 | MS.gene39118:intron | 55.0% | |
| CCATGCACCCAAATTGGGGT+TGG | - | chr7.4:18322911-18322930 | None:intergenic | 55.0% | |
| CCCAGCTACATCTTCTCCCT+TGG | - | chr7.4:18323536-18323555 | None:intergenic | 55.0% | |
| CGTCAGGTCCAACCCCAATT+TGG | + | chr7.4:18322900-18322919 | MS.gene39118:intron | 55.0% | |
| CTAGGAGGTTCGTGCTTCCT+TGG | - | chr7.4:18321806-18321825 | None:intergenic | 55.0% | |
| GAGGGGACGCGTATCTTATG+TGG | + | chr7.4:18322982-18323001 | MS.gene39118:intron | 55.0% | |
| GCCAATGGCTTGATGCAACG+AGG | - | chr7.4:18323793-18323812 | None:intergenic | 55.0% | |
| GCCGAAGCGGTTCTCATCAA+AGG | - | chr7.4:18323864-18323883 | None:intergenic | 55.0% | |
| GCCTACCCTTGTGTAGTTCC+GGG | - | chr7.4:18321277-18321296 | None:intergenic | 55.0% | |
| GCTACGTAGTCGTCGACAAG+AGG | + | chr7.4:18321184-18321203 | MS.gene39118:CDS | 55.0% | |
| GCTTGCTCACCTTGTGGTGT+TGG | + | chr7.4:18322455-18322474 | MS.gene39118:intron | 55.0% | |
| GGATAAAGGGCGGAGAGAGA+AGG | - | chr7.4:18322838-18322857 | None:intergenic | 55.0% | |
| GGGACCATGCACCCAAATTG+GGG | - | chr7.4:18322915-18322934 | None:intergenic | 55.0% | |
| GGGGACCATGCACCCAAATT+GGG | - | chr7.4:18322916-18322935 | None:intergenic | 55.0% | |
| GTCCTTTGGGCTTGACACTC+GGG | - | chr7.4:18323206-18323225 | None:intergenic | 55.0% | |
| TATGCCTGCTACCCTTGCTC+AGG | + | chr7.4:18322578-18322597 | MS.gene39118:CDS | 55.0% | |
| TGGGGACCATGCACCCAAAT+TGG | - | chr7.4:18322917-18322936 | None:intergenic | 55.0% | |
| ! | TGCTCACCTTGTGGTGTTGG+AGG | + | chr7.4:18322458-18322477 | MS.gene39118:CDS | 55.0% |
| CGACGGTGTGGAGCCTTCTT+CGG | - | chr7.4:18321981-18322000 | None:intergenic | 60.0% | |
| CTCCCGAGTGTCAAGCCCAA+AGG | + | chr7.4:18323201-18323220 | MS.gene39118:intron | 60.0% | |
| GACGGTGTGGAGCCTTCTTC+GGG | - | chr7.4:18321980-18321999 | None:intergenic | 60.0% | |
| GCGGCGCTGTTCATGAGATC+AGG | + | chr7.4:18321684-18321703 | MS.gene39118:CDS | 60.0% | |
| TGGAGGCAACTTCGCTGCCA+AGG | + | chr7.4:18322148-18322167 | MS.gene39118:CDS | 60.0% | |
| ACGGCTTCTTGCGCCTTCCC+TGG | + | chr7.4:18321875-18321894 | MS.gene39118:CDS | 65.0% | |
| GTCAAGAGGGTCGCGACACG+CGG | + | chr7.4:18321665-18321684 | MS.gene39118:CDS | 65.0% | |
| CACACCGTCGCGCCGTTGGA+GGG | + | chr7.4:18321991-18322010 | MS.gene39118:CDS | 70.0% | |
| CCATCCCTCCAACGGCGCGA+CGG | - | chr7.4:18321998-18322017 | None:intergenic | 70.0% | |
| CCACACCGTCGCGCCGTTGG+AGG | + | chr7.4:18321990-18322009 | MS.gene39118:CDS | 75.0% | |
| CCGTCGCGCCGTTGGAGGGA+TGG | + | chr7.4:18321995-18322014 | MS.gene39118:CDS | 75.0% | |
| CCTCCAACGGCGCGACGGTG+TGG | - | chr7.4:18321993-18322012 | None:intergenic | 75.0% | |
| GCTCCACACCGTCGCGCCGT+TGG | + | chr7.4:18321987-18322006 | MS.gene39118:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 18320741 | 18324331 | 18320741 | ID=MS.gene39118 |
| chr7.4 | mRNA | 18320741 | 18324331 | 18320741 | ID=MS.gene39118.t1;Parent=MS.gene39118 |
| chr7.4 | exon | 18320741 | 18322169 | 18320741 | ID=MS.gene39118.t1.exon1;Parent=MS.gene39118.t1 |
| chr7.4 | CDS | 18320741 | 18322169 | 18320741 | ID=cds.MS.gene39118.t1;Parent=MS.gene39118.t1 |
| chr7.4 | exon | 18322332 | 18322348 | 18322332 | ID=MS.gene39118.t1.exon2;Parent=MS.gene39118.t1 |
| chr7.4 | CDS | 18322332 | 18322348 | 18322332 | ID=cds.MS.gene39118.t1;Parent=MS.gene39118.t1 |
| chr7.4 | exon | 18322456 | 18322599 | 18322456 | ID=MS.gene39118.t1.exon3;Parent=MS.gene39118.t1 |
| chr7.4 | CDS | 18322456 | 18322599 | 18322456 | ID=cds.MS.gene39118.t1;Parent=MS.gene39118.t1 |
| chr7.4 | exon | 18323480 | 18324331 | 18323480 | ID=MS.gene39118.t1.exon4;Parent=MS.gene39118.t1 |
| chr7.4 | CDS | 18323480 | 18324331 | 18323480 | ID=cds.MS.gene39118.t1;Parent=MS.gene39118.t1 |
| Gene Sequence |
| Protein sequence |
