Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39641.t1 | XP_003607985.1 | 98 | 551 | 7 | 2 | 81 | 628 | 78 | 627 | 0.00E+00 | 1102 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39641.t1 | P40781 | 74.9 | 499 | 107 | 6 | 146 | 628 | 1 | 497 | 1.2e-218 | 760.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39641.t1 | G7JL95 | 98.0 | 551 | 7 | 2 | 81 | 628 | 78 | 627 | 0.0e+00 | 1102.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052570 | MS.gene39641 | 0.813881 | 2.04E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene39641 | 0.812446 | 4.22E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39641.t1 | MTR_4g086240 | 97.306 | 631 | 10 | 4 | 1 | 628 | 1 | 627 | 0.0 | 1263 |
| MS.gene39641.t1 | MTR_3g101680 | 63.134 | 651 | 201 | 9 | 1 | 626 | 1 | 637 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39641.t1 | AT3G19240 | 69.394 | 660 | 155 | 9 | 1 | 626 | 1 | 647 | 0.0 | 887 |
| MS.gene39641.t1 | AT4G33400 | 65.050 | 598 | 187 | 7 | 42 | 626 | 57 | 645 | 0.0 | 804 |
Find 168 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAATGATGCTGGCTTTC+AGG | 0.112027 | 4.2:+24646731 | MS.gene39641:CDS |
| ATTTCGTCTCCAACGGTGTC+TGG | 0.228016 | 4.2:+24646397 | MS.gene39641:CDS |
| GCAACACTCCCAACGCTAAA+TGG | 0.243481 | 4.2:+24646208 | MS.gene39641:CDS |
| GAGAATAAGGTTAAGGTTTA+CGG | 0.259733 | 4.2:+24646516 | MS.gene39641:CDS |
| GGGTACAACTGATACTTATT+TGG | 0.269243 | 4.2:+24647349 | MS.gene39641:CDS |
| GAAATTCAGTGACGAATTTC+CGG | 0.280068 | 4.2:-24646449 | None:intergenic |
| TGCACGTTTGAGAATGTTTA+CGG | 0.298124 | 4.2:+24646477 | MS.gene39641:CDS |
| CACTCCTCTGGATTCACATT+TGG | 0.308842 | 4.2:+24647472 | MS.gene39641:CDS |
| GAATTCCCCGGTCAAAATTC+CGG | 0.312404 | 4.2:-24646758 | None:intergenic |
| GCTACCACCAACGGAGCTTC+AGG | 0.325629 | 4.2:-24649229 | None:intergenic |
| ATGGCCACCATGAAACTTAT+TGG | 0.332207 | 4.2:-24647504 | None:intergenic |
| CCGGCAGGAGACGCCGAATA+AGG | 0.333099 | 4.2:+24646818 | MS.gene39641:CDS |
| TTTGAATGCTTTGCAACAAC+TGG | 0.335245 | 4.2:+24647182 | MS.gene39641:CDS |
| TATCAAGAGCACCTAGGGTT+AGG | 0.337247 | 4.2:-24646698 | None:intergenic |
| ATGCTGGCTTTCAGGTTTAC+CGG | 0.345587 | 4.2:+24646739 | MS.gene39641:CDS |
| ATAAGGCTCCGGACTCTTCC+CGG | 0.347959 | 4.2:-24646616 | None:intergenic |
| ACGGAATCATCCGCGGCTTC+CGG | 0.354674 | 4.2:-24646564 | None:intergenic |
| GAACTTCAATTAAAGATGTT+TGG | 0.356166 | 4.2:+24646357 | MS.gene39641:CDS |
| ATCACCGACGGAAGAGAATA+AGG | 0.356376 | 4.2:+24646503 | MS.gene39641:CDS |
| CCCTGGTTCCAATGCAAAAC+TGG | 0.356444 | 4.2:-24647134 | None:intergenic |
| GGAAGAGTCCGGAGCCTTAT+CGG | 0.358877 | 4.2:+24646619 | MS.gene39641:CDS |
| GGGAAGACAAAGACTGGTTT+TGG | 0.360962 | 4.2:+24647404 | MS.gene39641:CDS |
| GTAACATCAACGCTTGTAAT+CGG | 0.364613 | 4.2:-24647305 | None:intergenic |
| AACCAGCTTGATATAGAAAC+AGG | 0.367263 | 4.2:+24646918 | MS.gene39641:CDS |
| CTCATCAACAAAGCCTTATT+CGG | 0.367438 | 4.2:-24646831 | None:intergenic |
| ACAGTGCTCATGAATGTTAC+AGG | 0.367543 | 4.2:+24649101 | MS.gene39641:CDS |
| CTGATAGAGCTAACTTTCAT+AGG | 0.376837 | 4.2:-24649256 | None:intergenic |
| TGGGCAAGTTCAGTGTGATA+TGG | 0.385495 | 4.2:+24649059 | MS.gene39641:CDS |
| AATATAAACGGAGGTTTAAC+GGG | 0.388303 | 4.2:-24649296 | None:intergenic |
| GTTAGCTCTATCAGTATGTC+TGG | 0.398499 | 4.2:+24649265 | MS.gene39641:CDS |
| TTGGTGGTCGTATGGGAAAC+AGG | 0.400307 | 4.2:+24647423 | MS.gene39641:CDS |
| ATTGTTGAAGCTCACTCCTC+TGG | 0.400548 | 4.2:+24647460 | MS.gene39641:CDS |
| GAGTGGAAGTTTGAGAAAGA+TGG | 0.406716 | 4.2:+24646954 | MS.gene39641:CDS |
| GGCGTAGGAGGTTCGTTTGT+CGG | 0.407065 | 4.2:-24646238 | None:intergenic |
| ATTGTGGTGGGGTCTCTTGA+TGG | 0.409543 | 4.2:+24647215 | MS.gene39641:CDS |
| GTTTACGGTAAGGAGTTTAT+CGG | 0.411185 | 4.2:+24646531 | MS.gene39641:CDS |
| TAACATCAACGCTTGTAATC+GGG | 0.416479 | 4.2:-24647304 | None:intergenic |
| GTCTTTCAGGTCACTGAGAA+TGG | 0.421407 | 4.2:+24649007 | MS.gene39641:intron |
| ATCAAGAGCACCTAGGGTTA+GGG | 0.431483 | 4.2:-24646697 | None:intergenic |
| TCGGTCTAGAGGTGATTTGA+TGG | 0.434873 | 4.2:+24646638 | MS.gene39641:CDS |
| AAACATCTTTAATTGAAGTT+CGG | 0.437252 | 4.2:-24646355 | None:intergenic |
| AGGATCCAATTGTGACCCTT+TGG | 0.437994 | 4.2:-24647012 | None:intergenic |
| CGGTAAGGAGTTTATCGGTT+GGG | 0.438836 | 4.2:+24646536 | MS.gene39641:CDS |
| AAGCCGCGGATGATTCCGTT+TGG | 0.443303 | 4.2:+24646568 | MS.gene39641:CDS |
| TGATACCAAAGGGTCACAAT+TGG | 0.445124 | 4.2:+24647007 | MS.gene39641:CDS |
| ATGTGGCGCTCCACTATTCA+AGG | 0.446889 | 4.2:-24646883 | None:intergenic |
| CGAGGTTGGTGGAATGTGAT+TGG | 0.450494 | 4.2:-24646059 | None:intergenic |
| GAGAGAATCCATTTAGCGTT+GGG | 0.450845 | 4.2:-24646216 | None:intergenic |
| GTCGTAATCTGAGTCGGAAT+CGG | 0.451640 | 4.2:-24645974 | None:intergenic |
| CCTCTGGATTCACATTTGGC+TGG | 0.454255 | 4.2:+24647476 | MS.gene39641:CDS |
| AGGGTCACAATTGGATCCTT+CGG | 0.454835 | 4.2:+24647016 | MS.gene39641:CDS |
| AGCCGCGGATGATTCCGTTT+GGG | 0.459582 | 4.2:+24646569 | MS.gene39641:CDS |
| ATGATAATAGGCTATGTCAA+TGG | 0.461578 | 4.2:+24647060 | MS.gene39641:CDS |
| TTTCGTCTCCAACGGTGTCT+GGG | 0.461909 | 4.2:+24646398 | MS.gene39641:CDS |
| GGAAAATTCACGGCCTTCGC+GGG | 0.464185 | 4.2:-24645953 | None:intergenic |
| GGAACTACCAATAAGTTTCA+TGG | 0.465212 | 4.2:+24647497 | MS.gene39641:CDS |
| TTCATGGTGGCCATTTCTCA+TGG | 0.466170 | 4.2:+24647513 | MS.gene39641:CDS |
| ATCGATGAGGATGGCGAAGA+CGG | 0.468077 | 4.2:+24647262 | MS.gene39641:CDS |
| TGATGGCTCCGGGAAGAGTC+CGG | 0.468191 | 4.2:+24646608 | MS.gene39641:CDS |
| AATATGAAGGTGGGAATCTC+CGG | 0.468508 | 4.2:+24646799 | MS.gene39641:CDS |
| GACGGAAGAGAATAAGGTTA+AGG | 0.470623 | 4.2:+24646509 | MS.gene39641:CDS |
| GCTGTTTCCGATGATGGCTC+CGG | 0.471673 | 4.2:+24646597 | MS.gene39641:CDS |
| CATCTTTAATTGAAGTTCGG+TGG | 0.474570 | 4.2:-24646352 | None:intergenic |
| CGGAAAATTCACGGCCTTCG+CGG | 0.476321 | 4.2:-24645954 | None:intergenic |
| TAAGGTTAAGGTTTACGGTA+AGG | 0.479211 | 4.2:+24646521 | MS.gene39641:CDS |
| TTTGATGGAAAGTGGGTGTT+GGG | 0.481016 | 4.2:+24647329 | MS.gene39641:CDS |
| CTGTTACAAGATAGTATTGA+AGG | 0.484212 | 4.2:+24649150 | MS.gene39641:CDS |
| GAAGATGCTGTTTCCGATGA+TGG | 0.484247 | 4.2:+24646591 | MS.gene39641:CDS |
| TCCCTGTTTCTATATCAAGC+TGG | 0.490609 | 4.2:-24646920 | None:intergenic |
| ACGATGTCGCTCAAGGTCAA+TGG | 0.492537 | 4.2:+24646292 | MS.gene39641:CDS |
| CTCCCCTGAAGCTCCGTTGG+TGG | 0.492757 | 4.2:+24649225 | MS.gene39641:CDS |
| CGACTCCCCTGAAGCTCCGT+TGG | 0.497070 | 4.2:+24649222 | MS.gene39641:CDS |
| TGATAATAGGCTATGTCAAT+GGG | 0.497189 | 4.2:+24647061 | MS.gene39641:CDS |
| AGTGGAAGTTTGAGAAAGAT+GGG | 0.500651 | 4.2:+24646955 | MS.gene39641:CDS |
| GTTTATCGGTTGGGTGAAGC+CGG | 0.501437 | 4.2:+24646545 | MS.gene39641:CDS |
| GATTGATTACCCATGAGAAA+TGG | 0.502077 | 4.2:-24647523 | None:intergenic |
| CCTTATTCGGCGTCTCCTGC+CGG | 0.502524 | 4.2:-24646818 | None:intergenic |
| CTCTTGAAAATTGATGCCCC+TGG | 0.506880 | 4.2:-24647151 | None:intergenic |
| ACATTGTTTACTGATAAAGA+TGG | 0.508772 | 4.2:+24647383 | MS.gene39641:CDS |
| TGGGATATGCGTGATAGAAA+AGG | 0.509675 | 4.2:+24647080 | MS.gene39641:CDS |
| GTAATCGGGGAACCAAGCCC+AGG | 0.519099 | 4.2:-24647290 | None:intergenic |
| CGAATAAGGCTTTGTTGATG+AGG | 0.523505 | 4.2:+24646832 | MS.gene39641:CDS |
| GGGCAAGTTCAGTGTGATAT+GGG | 0.523866 | 4.2:+24649060 | MS.gene39641:CDS |
| CTACCACCAACGGAGCTTCA+GGG | 0.527377 | 4.2:-24649228 | None:intergenic |
| CTGATGAGTCCCTTGAATAG+TGG | 0.528395 | 4.2:+24646873 | MS.gene39641:CDS |
| GGAGAGAATCCATTTAGCGT+TGG | 0.530109 | 4.2:-24646217 | None:intergenic |
| ATGGGGCTGATATTACTATG+AGG | 0.530532 | 4.2:+24646973 | MS.gene39641:CDS |
| GGAGTGAGCTTCAACAATCT+AGG | 0.532631 | 4.2:-24647455 | None:intergenic |
| AAATCACCTCTAGACCGATA+AGG | 0.534172 | 4.2:-24646633 | None:intergenic |
| ACGGTAAGGAGTTTATCGGT+TGG | 0.534675 | 4.2:+24646535 | MS.gene39641:CDS |
| GAATTTCCGGTAGGATTCAT+CGG | 0.534793 | 4.2:-24646436 | None:intergenic |
| TTTGACCGGGGAATTCGAAA+GGG | 0.535186 | 4.2:+24646765 | MS.gene39641:CDS |
| GTCGACATCATCGAGGTTGG+TGG | 0.536613 | 4.2:-24646070 | None:intergenic |
| CTGTTTCCGATGATGGCTCC+GGG | 0.537725 | 4.2:+24646598 | MS.gene39641:CDS |
| TTCCGGTAGGATTCATCGGT+GGG | 0.539088 | 4.2:-24646432 | None:intergenic |
| AAAGATGGGAAGACAAAGAC+TGG | 0.541574 | 4.2:+24647398 | MS.gene39641:CDS |
| GAGTTTGAAGAGGCTGCAAA+TGG | 0.542974 | 4.2:+24646663 | MS.gene39641:CDS |
| CGCCACCTTGTTGCGACTGT+GGG | 0.543451 | 4.2:+24649040 | MS.gene39641:CDS |
| GAGGTTGGTGGAATGTGATT+GGG | 0.544190 | 4.2:-24646058 | None:intergenic |
| GAACAAAACGATGTCGCTCA+AGG | 0.552344 | 4.2:+24646285 | MS.gene39641:CDS |
| GGAGATGGTTCAATTGTGGT+GGG | 0.552428 | 4.2:+24647203 | MS.gene39641:CDS |
| CGTGTTGATTTCGTCTCCAA+CGG | 0.558067 | 4.2:+24646390 | MS.gene39641:CDS |
| TGGAGATGGTTCAATTGTGG+TGG | 0.559045 | 4.2:+24647202 | MS.gene39641:CDS |
| GGGGTAGCTGTGAAATATGA+AGG | 0.559703 | 4.2:+24646786 | MS.gene39641:CDS |
| ACTCTTCCCGGAGCCATCAT+CGG | 0.560365 | 4.2:-24646604 | None:intergenic |
| ACGCCACCTTGTTGCGACTG+TGG | 0.560977 | 4.2:+24649039 | MS.gene39641:CDS |
| CATTGTTTACTGATAAAGAT+GGG | 0.561253 | 4.2:+24647384 | MS.gene39641:CDS |
| ACTGTTATCAAGAGCACCTA+GGG | 0.561865 | 4.2:-24646703 | None:intergenic |
| AGTCGGAATCGGAAAATTCA+CGG | 0.562438 | 4.2:-24645963 | None:intergenic |
| TGCTTTGCAACAACTGGAGA+TGG | 0.562443 | 4.2:+24647188 | MS.gene39641:CDS |
| TCATGGTGGCCATTTCTCAT+GGG | 0.562447 | 4.2:+24647514 | MS.gene39641:CDS |
| GGTCGTATGGGAAACAGGAT+AGG | 0.565383 | 4.2:+24647428 | MS.gene39641:CDS |
| TTGGGTGAAGCCGGAAGCCG+CGG | 0.568941 | 4.2:+24646554 | MS.gene39641:CDS |
| AGCGTCGACATCATCGAGGT+TGG | 0.570308 | 4.2:-24646073 | None:intergenic |
| CCTCTAGACCGATAAGGCTC+CGG | 0.574522 | 4.2:-24646627 | None:intergenic |
| ATAGGAGTTGCTACCACCAA+CGG | 0.574538 | 4.2:-24649238 | None:intergenic |
| TTCCCACCGATGAATCCTAC+CGG | 0.575350 | 4.2:+24646430 | MS.gene39641:CDS |
| TTTAAGAGCCCAGACACCGT+TGG | 0.580496 | 4.2:-24646406 | None:intergenic |
| TAGCTGTGAAATATGAAGGT+GGG | 0.583398 | 4.2:+24646790 | MS.gene39641:CDS |
| ATATCACAAATGATACCAAA+GGG | 0.586841 | 4.2:+24646997 | MS.gene39641:CDS |
| GGAAACAGCATCTTCCCAAA+CGG | 0.591198 | 4.2:-24646583 | None:intergenic |
| GGTATTCAAACCCTAACCCT+AGG | 0.591767 | 4.2:+24646687 | MS.gene39641:CDS |
| GAATAAGGCTTTGTTGATGA+GGG | 0.593377 | 4.2:+24646833 | MS.gene39641:CDS |
| GATATCACAAATGATACCAA+AGG | 0.593545 | 4.2:+24646996 | MS.gene39641:CDS |
| TACCACCAACGGAGCTTCAG+GGG | 0.595085 | 4.2:-24649227 | None:intergenic |
| TTGTTCGTCGTAATCTGAGT+CGG | 0.595936 | 4.2:-24645980 | None:intergenic |
| AACATCAACGCTTGTAATCG+GGG | 0.597890 | 4.2:-24647303 | None:intergenic |
| TGGGGCTGATATTACTATGA+GGG | 0.598346 | 4.2:+24646974 | MS.gene39641:CDS |
| TGAAGGTGGGAATCTCCGGC+AGG | 0.605060 | 4.2:+24646803 | MS.gene39641:CDS |
| TTAACCTTATTCTCTTCCGT+CGG | 0.609586 | 4.2:-24646507 | None:intergenic |
| TTGACCGGGGAATTCGAAAG+GGG | 0.609777 | 4.2:+24646766 | MS.gene39641:CDS |
| TTTGAAGAGGCTGCAAATGG+TGG | 0.611463 | 4.2:+24646666 | MS.gene39641:CDS |
| CCGGAGCCTTATCGGTCTAG+AGG | 0.612763 | 4.2:+24646627 | MS.gene39641:CDS |
| TGGTTCAGCTTCGAAGCATG+TGG | 0.615986 | 4.2:-24646900 | None:intergenic |
| GGGATGAAGATTGAACGTCT+TGG | 0.616486 | 4.2:-24646038 | None:intergenic |
| TTTCCGGTAGGATTCATCGG+TGG | 0.620316 | 4.2:-24646433 | None:intergenic |
| CAGGGAAGATTGTTTCAGAG+TGG | 0.620928 | 4.2:+24646937 | MS.gene39641:CDS |
| TTCGAATAAATCGATGAGGA+TGG | 0.623115 | 4.2:+24647253 | MS.gene39641:CDS |
| GAGTGTTGCCGCCGATGTGA+AGG | 0.626265 | 4.2:-24646194 | None:intergenic |
| AAGCTTTACCTTCACATCGG+CGG | 0.627540 | 4.2:+24646186 | MS.gene39641:CDS |
| GGTCTCTTGATGGAAAGATA+AGG | 0.629620 | 4.2:+24647225 | MS.gene39641:CDS |
| ACTTGCCCACAGTCGCAACA+AGG | 0.634313 | 4.2:-24649045 | None:intergenic |
| GGTCAATGGATTCTCAAAGT+CGG | 0.637822 | 4.2:+24646306 | MS.gene39641:CDS |
| AACTGTTATCAAGAGCACCT+AGG | 0.637908 | 4.2:-24646704 | None:intergenic |
| GAGATGGTTCAATTGTGGTG+GGG | 0.643174 | 4.2:+24647204 | MS.gene39641:CDS |
| TTTGATGGAGGAGTTTGAAG+AGG | 0.645411 | 4.2:+24646653 | MS.gene39641:CDS |
| TGTGGCGCTCCACTATTCAA+GGG | 0.647458 | 4.2:-24646882 | None:intergenic |
| TTCAGTGACGAATTTCCGGT+AGG | 0.648527 | 4.2:-24646445 | None:intergenic |
| GTAGCTGTGAAATATGAAGG+TGG | 0.649176 | 4.2:+24646789 | MS.gene39641:CDS |
| ACGAGTCAATCATAGAATCA+CGG | 0.650778 | 4.2:+24649173 | MS.gene39641:CDS |
| AACTGGAGATGGTTCAATTG+TGG | 0.661094 | 4.2:+24647199 | MS.gene39641:CDS |
| GTCTAGAGGTGATTTGATGG+AGG | 0.661438 | 4.2:+24646641 | MS.gene39641:CDS |
| TTCCCAAACGGAATCATCCG+CGG | 0.661974 | 4.2:-24646571 | None:intergenic |
| GGTACTTCTCAATCCCGCGA+AGG | 0.669085 | 4.2:+24645940 | MS.gene39641:CDS |
| TGTTTACGGTTTATCACCGA+CGG | 0.671523 | 4.2:+24646491 | MS.gene39641:CDS |
| GAATGTTACAGGAATCAACA+AGG | 0.677359 | 4.2:+24649112 | MS.gene39641:CDS |
| ACCAGCTTGATATAGAAACA+GGG | 0.678641 | 4.2:+24646919 | MS.gene39641:CDS |
| TGACCGGGGAATTCGAAAGG+GGG | 0.680507 | 4.2:+24646767 | MS.gene39641:CDS |
| GTCAAGCTTTACCTTCACAT+CGG | 0.680830 | 4.2:+24646183 | MS.gene39641:CDS |
| TGTATTCGAATAAATCGATG+AGG | 0.688375 | 4.2:+24647249 | MS.gene39641:CDS |
| GTGGAAGTTTGAGAAAGATG+GGG | 0.691794 | 4.2:+24646956 | MS.gene39641:CDS |
| CCAGCCAAATGTGAATCCAG+AGG | 0.694133 | 4.2:-24647476 | None:intergenic |
| AATGTTACAGGAATCAACAA+GGG | 0.703235 | 4.2:+24649113 | MS.gene39641:CDS |
| TGCCCACAGTCGCAACAAGG+TGG | 0.708774 | 4.2:-24649042 | None:intergenic |
| CGTTGGAGACGAAATCAACA+CGG | 0.722626 | 4.2:-24646389 | None:intergenic |
| GTTCGGTGGAAACCCTAGCG+CGG | 0.733834 | 4.2:-24646338 | None:intergenic |
| ACTACCAATAAGTTTCATGG+TGG | 0.735152 | 4.2:+24647500 | MS.gene39641:CDS |
| GTTTAGCGTCGACATCATCG+AGG | 0.758315 | 4.2:-24646077 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATACAAATGAATATGAAT+GGG | + | chr4.2:24647621-24647640 | MS.gene39641:intron | 15.0% |
| !!! | ACAATGTTTTTGAATTAAAT+AGG | + | chr4.2:24648007-24648026 | MS.gene39641:intron | 15.0% |
| !! | AAACATCTTTAATTGAAGTT+CGG | - | chr4.2:24646358-24646377 | None:intergenic | 20.0% |
| !! | AGATAATGTTATCAGTAAAT+TGG | + | chr4.2:24648678-24648697 | MS.gene39641:intron | 20.0% |
| !! | AGGAATATAAAAAAAGTAGT+TGG | - | chr4.2:24647829-24647848 | None:intergenic | 20.0% |
| !! | CATATACAAATGAATATGAA+TGG | + | chr4.2:24647620-24647639 | MS.gene39641:intron | 20.0% |
| !! | GATAATGTTATCAGTAAATT+GGG | + | chr4.2:24648679-24648698 | MS.gene39641:intron | 20.0% |
| ! | AAAAGTTCTGTCATTAACAA+AGG | - | chr4.2:24647857-24647876 | None:intergenic | 25.0% |
| ! | ACATTGTTTACTGATAAAGA+TGG | + | chr4.2:24647383-24647402 | MS.gene39641:CDS | 25.0% |
| ! | ATATCACAAATGATACCAAA+GGG | + | chr4.2:24646997-24647016 | MS.gene39641:CDS | 25.0% |
| ! | CATTGTTTACTGATAAAGAT+GGG | + | chr4.2:24647384-24647403 | MS.gene39641:CDS | 25.0% |
| ! | GAACTTCAATTAAAGATGTT+TGG | + | chr4.2:24646357-24646376 | MS.gene39641:CDS | 25.0% |
| ! | GGAATGTTAATTTAAACTGA+TGG | + | chr4.2:24648918-24648937 | MS.gene39641:intron | 25.0% |
| ! | GTTAAGAAATCAAGTTATCA+TGG | + | chr4.2:24648587-24648606 | MS.gene39641:intron | 25.0% |
| ! | TCAAAAACATTGTCAAATGA+CGG | - | chr4.2:24648000-24648019 | None:intergenic | 25.0% |
| ! | TGAATTAAATAGGATATCAC+AGG | + | chr4.2:24648017-24648036 | MS.gene39641:intron | 25.0% |
| ! | TGATCAGTGAGTTATAAATA+TGG | + | chr4.2:24648835-24648854 | MS.gene39641:intron | 25.0% |
| ! | TGTCATTAACAAAGGAAATA+AGG | - | chr4.2:24647849-24647868 | None:intergenic | 25.0% |
| ! | TTACAAAAGAAAACCTAGAA+TGG | - | chr4.2:24648162-24648181 | None:intergenic | 25.0% |
| !! | AATTTCACTTAATGAGTTGA+TGG | - | chr4.2:24648619-24648638 | None:intergenic | 25.0% |
| !! | ACTTTCTGTTACTTATGTTT+GGG | + | chr4.2:24648312-24648331 | MS.gene39641:intron | 25.0% |
| !! | AGGTTATTTAATGTTGACTA+TGG | - | chr4.2:24647728-24647747 | None:intergenic | 25.0% |
| !! | TATTTAATGTTGACTATGGT+GGG | - | chr4.2:24647724-24647743 | None:intergenic | 25.0% |
| !! | TCTAGGTTTTCTTTTGTAAA+GGG | + | chr4.2:24648163-24648182 | MS.gene39641:intron | 25.0% |
| !! | TTACCTTTTCAACAGTAAAA+GGG | - | chr4.2:24647758-24647777 | None:intergenic | 25.0% |
| !! | TTATTTAATGTTGACTATGG+TGG | - | chr4.2:24647725-24647744 | None:intergenic | 25.0% |
| !! | TTCTAGGTTTTCTTTTGTAA+AGG | + | chr4.2:24648162-24648181 | MS.gene39641:intron | 25.0% |
| !!! | AGAAGAGTATTTGAGTTTTA+AGG | - | chr4.2:24646109-24646128 | None:intergenic | 25.0% |
| !!! | ATTAATTCTCTTGCTGTTAT+AGG | + | chr4.2:24648189-24648208 | MS.gene39641:intron | 25.0% |
| !!! | TTTTTAGTGGTAAACATTGA+TGG | - | chr4.2:24648137-24648156 | None:intergenic | 25.0% |
| AAAGGATGAAAAACAAGTAC+AGG | + | chr4.2:24648526-24648545 | MS.gene39641:intron | 30.0% | |
| AATGCAGCAAGATGTATAAA+TGG | + | chr4.2:24648427-24648446 | MS.gene39641:intron | 30.0% | |
| AATGTTACAGGAATCAACAA+GGG | + | chr4.2:24649113-24649132 | MS.gene39641:CDS | 30.0% | |
| ACCACTAAAAATTCCATTCT+AGG | + | chr4.2:24648146-24648165 | MS.gene39641:intron | 30.0% | |
| ATATGTCAATGCGAAATAGA+AGG | - | chr4.2:24647574-24647593 | None:intergenic | 30.0% | |
| ATCACTCTTCTCTATTATTG+TGG | + | chr4.2:24647543-24647562 | MS.gene39641:intron | 30.0% | |
| ATGATAATAGGCTATGTCAA+TGG | + | chr4.2:24647060-24647079 | MS.gene39641:CDS | 30.0% | |
| GAGAATAAGGTTAAGGTTTA+CGG | + | chr4.2:24646516-24646535 | MS.gene39641:CDS | 30.0% | |
| GATATCACAAATGATACCAA+AGG | + | chr4.2:24646996-24647015 | MS.gene39641:CDS | 30.0% | |
| GGGTGAGATTTAATGATAAT+GGG | + | chr4.2:24648467-24648486 | MS.gene39641:intron | 30.0% | |
| TACTGTTGAAAAGGTAAGTA+TGG | + | chr4.2:24647761-24647780 | MS.gene39641:intron | 30.0% | |
| TATGTCTTGTACTCTACTAA+TGG | - | chr4.2:24648556-24648575 | None:intergenic | 30.0% | |
| TGATAATAGGCTATGTCAAT+GGG | + | chr4.2:24647061-24647080 | MS.gene39641:CDS | 30.0% | |
| TGGGTGAGATTTAATGATAA+TGG | + | chr4.2:24648466-24648485 | MS.gene39641:intron | 30.0% | |
| TGTATTCGAATAAATCGATG+AGG | + | chr4.2:24647249-24647268 | MS.gene39641:CDS | 30.0% | |
| TGTCTGATTTAGCAATAGTA+GGG | + | chr4.2:24648267-24648286 | MS.gene39641:intron | 30.0% | |
| TTCACAATCGCACTATTATA+TGG | - | chr4.2:24648388-24648407 | None:intergenic | 30.0% | |
| ! | AAATGATTAATACTTGCTGC+AGG | - | chr4.2:24648980-24648999 | None:intergenic | 30.0% |
| ! | CACTTTCTGTTACTTATGTT+TGG | + | chr4.2:24648311-24648330 | MS.gene39641:intron | 30.0% |
| ! | CTAGGTTTTCTTTTGTAAAG+GGG | + | chr4.2:24648164-24648183 | MS.gene39641:intron | 30.0% |
| ! | CTGTTACAAGATAGTATTGA+AGG | + | chr4.2:24649150-24649169 | MS.gene39641:CDS | 30.0% |
| ! | CTTACCTTTTCAACAGTAAA+AGG | - | chr4.2:24647759-24647778 | None:intergenic | 30.0% |
| ! | TACCTTTTCAACAGTAAAAG+GGG | - | chr4.2:24647757-24647776 | None:intergenic | 30.0% |
| !! | ACCTAGAATGGAATTTTTAG+TGG | - | chr4.2:24648150-24648169 | None:intergenic | 30.0% |
| !!! | ATGTTACTTTTGATGGAAAG+TGG | + | chr4.2:24647321-24647340 | MS.gene39641:CDS | 30.0% |
| !!! | TCATTTGCTTTTTGTCTTTC+AGG | + | chr4.2:24648994-24649013 | MS.gene39641:intron | 30.0% |
| !!! | TGTTACTTTTGATGGAAAGT+GGG | + | chr4.2:24647322-24647341 | MS.gene39641:CDS | 30.0% |
| !!! | TTTTAGGGTTGGATGATAAT+AGG | + | chr4.2:24647048-24647067 | MS.gene39641:CDS | 30.0% |
| AAACAAGGAATTCTATCTCG+AGG | - | chr4.2:24648874-24648893 | None:intergenic | 35.0% | |
| AACCAGCTTGATATAGAAAC+AGG | + | chr4.2:24646918-24646937 | MS.gene39641:CDS | 35.0% | |
| ACCAGCTTGATATAGAAACA+GGG | + | chr4.2:24646919-24646938 | MS.gene39641:CDS | 35.0% | |
| ACGAGTCAATCATAGAATCA+CGG | + | chr4.2:24649173-24649192 | MS.gene39641:CDS | 35.0% | |
| ACGCTTTCTGTTTAAAAGCT+AGG | + | chr4.2:24648339-24648358 | MS.gene39641:intron | 35.0% | |
| ACTACCAATAAGTTTCATGG+TGG | + | chr4.2:24647500-24647519 | MS.gene39641:CDS | 35.0% | |
| AGTGGAAGTTTGAGAAAGAT+GGG | + | chr4.2:24646955-24646974 | MS.gene39641:CDS | 35.0% | |
| AGTTCTTTCATACACTGTAC+AGG | - | chr4.2:24647888-24647907 | None:intergenic | 35.0% | |
| CATCTTTAATTGAAGTTCGG+TGG | - | chr4.2:24646355-24646374 | None:intergenic | 35.0% | |
| CTGATAGAGCTAACTTTCAT+AGG | - | chr4.2:24649259-24649278 | None:intergenic | 35.0% | |
| CTGTCTGATTTAGCAATAGT+AGG | + | chr4.2:24648266-24648285 | MS.gene39641:intron | 35.0% | |
| GAAATTCAGTGACGAATTTC+CGG | - | chr4.2:24646452-24646471 | None:intergenic | 35.0% | |
| GAATGTTACAGGAATCAACA+AGG | + | chr4.2:24649112-24649131 | MS.gene39641:CDS | 35.0% | |
| GATTGATTACCCATGAGAAA+TGG | - | chr4.2:24647526-24647545 | None:intergenic | 35.0% | |
| GGAACTACCAATAAGTTTCA+TGG | + | chr4.2:24647497-24647516 | MS.gene39641:CDS | 35.0% | |
| GGGTACAACTGATACTTATT+TGG | + | chr4.2:24647349-24647368 | MS.gene39641:CDS | 35.0% | |
| GGTATAGAACTATTGCATAG+CGG | - | chr4.2:24647967-24647986 | None:intergenic | 35.0% | |
| GTAACATCAACGCTTGTAAT+CGG | - | chr4.2:24647308-24647327 | None:intergenic | 35.0% | |
| GTCTGATTTAGCAATAGTAG+GGG | + | chr4.2:24648268-24648287 | MS.gene39641:intron | 35.0% | |
| GTTTACGGTAAGGAGTTTAT+CGG | + | chr4.2:24646531-24646550 | MS.gene39641:CDS | 35.0% | |
| TAACATCAACGCTTGTAATC+GGG | - | chr4.2:24647307-24647326 | None:intergenic | 35.0% | |
| TAAGGTTAAGGTTTACGGTA+AGG | + | chr4.2:24646521-24646540 | MS.gene39641:CDS | 35.0% | |
| TAGCTGTGAAATATGAAGGT+GGG | + | chr4.2:24646790-24646809 | MS.gene39641:CDS | 35.0% | |
| TAGGATATCACAGGAAATAG+TGG | + | chr4.2:24648026-24648045 | MS.gene39641:intron | 35.0% | |
| TATAGGCTTATTACCATGTG+CGG | + | chr4.2:24648206-24648225 | MS.gene39641:intron | 35.0% | |
| TATGCAGCATGGAATAAACA+AGG | - | chr4.2:24648889-24648908 | None:intergenic | 35.0% | |
| TCTGATTTAGCAATAGTAGG+GGG | + | chr4.2:24648269-24648288 | MS.gene39641:intron | 35.0% | |
| TGCACGTTTGAGAATGTTTA+CGG | + | chr4.2:24646477-24646496 | MS.gene39641:CDS | 35.0% | |
| TTAACCTTATTCTCTTCCGT+CGG | - | chr4.2:24646510-24646529 | None:intergenic | 35.0% | |
| TTCGAATAAATCGATGAGGA+TGG | + | chr4.2:24647253-24647272 | MS.gene39641:CDS | 35.0% | |
| TTTCATACACTGTACAGGTA+TGG | - | chr4.2:24647883-24647902 | None:intergenic | 35.0% | |
| TTTGAATGCTTTGCAACAAC+TGG | + | chr4.2:24647182-24647201 | MS.gene39641:CDS | 35.0% | |
| ! | AGTTTTCTTCTCAATGATGC+TGG | + | chr4.2:24646723-24646742 | MS.gene39641:CDS | 35.0% |
| ! | CAGTCAGTGTTGTTAAATAG+CGG | - | chr4.2:24648078-24648097 | None:intergenic | 35.0% |
| ! | GCATGCTTTTAATAGAAGAC+AGG | + | chr4.2:24648730-24648749 | MS.gene39641:intron | 35.0% |
| ! | GTCTCTGATTGTGATTTTGA+AGG | - | chr4.2:24646138-24646157 | None:intergenic | 35.0% |
| ! | TAAAGCTTGACAGCGTTTTT+GGG | - | chr4.2:24646174-24646193 | None:intergenic | 35.0% |
| ! | TCACCCATCATTTTCAGAAT+CGG | - | chr4.2:24648453-24648472 | None:intergenic | 35.0% |
| !! | CTCATCAACAAAGCCTTATT+CGG | - | chr4.2:24646834-24646853 | None:intergenic | 35.0% |
| !! | GAATAAGGCTTTGTTGATGA+GGG | + | chr4.2:24646833-24646852 | MS.gene39641:CDS | 35.0% |
| !! | GATTGTGATTTTGAAGGTGA+AGG | - | chr4.2:24646132-24646151 | None:intergenic | 35.0% |
| !!! | AGCGTTGATGTTACTTTTGA+TGG | + | chr4.2:24647314-24647333 | MS.gene39641:CDS | 35.0% |
| AAAGATGGGAAGACAAAGAC+TGG | + | chr4.2:24647398-24647417 | MS.gene39641:CDS | 40.0% | |
| AAATCACCTCTAGACCGATA+AGG | - | chr4.2:24646636-24646655 | None:intergenic | 40.0% | |
| AACAGTAAAAGGGGTGATTC+AGG | - | chr4.2:24647748-24647767 | None:intergenic | 40.0% | |
| AACATCAACGCTTGTAATCG+GGG | - | chr4.2:24647306-24647325 | None:intergenic | 40.0% | |
| AACTGGAGATGGTTCAATTG+TGG | + | chr4.2:24647199-24647218 | MS.gene39641:CDS | 40.0% | |
| AATATGAAGGTGGGAATCTC+CGG | + | chr4.2:24646799-24646818 | MS.gene39641:CDS | 40.0% | |
| AATGGGTAGCGTAAGTAATG+AGG | + | chr4.2:24648484-24648503 | MS.gene39641:intron | 40.0% | |
| ACAGTGCTCATGAATGTTAC+AGG | + | chr4.2:24649101-24649120 | MS.gene39641:CDS | 40.0% | |
| AGTCGGAATCGGAAAATTCA+CGG | - | chr4.2:24645966-24645985 | None:intergenic | 40.0% | |
| ATATGTGTGTGTGTGTGTGT+TGG | - | chr4.2:24647678-24647697 | None:intergenic | 40.0% | |
| ATGGCCACCATGAAACTTAT+TGG | - | chr4.2:24647507-24647526 | None:intergenic | 40.0% | |
| ATGGGGCTGATATTACTATG+AGG | + | chr4.2:24646973-24646992 | MS.gene39641:CDS | 40.0% | |
| ATGGGTAGCGTAAGTAATGA+GGG | + | chr4.2:24648485-24648504 | MS.gene39641:intron | 40.0% | |
| ATTACCATGTGCGGAAACTA+GGG | + | chr4.2:24648215-24648234 | MS.gene39641:intron | 40.0% | |
| ATTCTATCTCGAGGTGCATT+TGG | - | chr4.2:24648865-24648884 | None:intergenic | 40.0% | |
| CTGATTTAGCAATAGTAGGG+GGG | + | chr4.2:24648270-24648289 | MS.gene39641:intron | 40.0% | |
| GAATTTCCGGTAGGATTCAT+CGG | - | chr4.2:24646439-24646458 | None:intergenic | 40.0% | |
| GACGGAAGAGAATAAGGTTA+AGG | + | chr4.2:24646509-24646528 | MS.gene39641:CDS | 40.0% | |
| GAGAGAATCCATTTAGCGTT+GGG | - | chr4.2:24646219-24646238 | None:intergenic | 40.0% | |
| GAGTGGAAGTTTGAGAAAGA+TGG | + | chr4.2:24646954-24646973 | MS.gene39641:CDS | 40.0% | |
| GGTCTCTTGATGGAAAGATA+AGG | + | chr4.2:24647225-24647244 | MS.gene39641:CDS | 40.0% | |
| GTAGCTGTGAAATATGAAGG+TGG | + | chr4.2:24646789-24646808 | MS.gene39641:CDS | 40.0% | |
| GTCAAGCTTTACCTTCACAT+CGG | + | chr4.2:24646183-24646202 | MS.gene39641:CDS | 40.0% | |
| GTGGAAGTTTGAGAAAGATG+GGG | + | chr4.2:24646956-24646975 | MS.gene39641:CDS | 40.0% | |
| GTTCATGCACAGTGTAATTG+TGG | + | chr4.2:24647912-24647931 | MS.gene39641:intron | 40.0% | |
| TAATAGAAGACAGGACTGCA+GGG | + | chr4.2:24648739-24648758 | MS.gene39641:intron | 40.0% | |
| TATTACCATGTGCGGAAACT+AGG | + | chr4.2:24648214-24648233 | MS.gene39641:intron | 40.0% | |
| TGATACCAAAGGGTCACAAT+TGG | + | chr4.2:24647007-24647026 | MS.gene39641:CDS | 40.0% | |
| TGGGATATGCGTGATAGAAA+AGG | + | chr4.2:24647080-24647099 | MS.gene39641:CDS | 40.0% | |
| TGGGGCTGATATTACTATGA+GGG | + | chr4.2:24646974-24646993 | MS.gene39641:CDS | 40.0% | |
| TGTTTACGGTTTATCACCGA+CGG | + | chr4.2:24646491-24646510 | MS.gene39641:CDS | 40.0% | |
| TTAATAGAAGACAGGACTGC+AGG | + | chr4.2:24648738-24648757 | MS.gene39641:intron | 40.0% | |
| TTGTTCGTCGTAATCTGAGT+CGG | - | chr4.2:24645983-24646002 | None:intergenic | 40.0% | |
| TTTGATGGAAAGTGGGTGTT+GGG | + | chr4.2:24647329-24647348 | MS.gene39641:CDS | 40.0% | |
| TTTGATGGAGGAGTTTGAAG+AGG | + | chr4.2:24646653-24646672 | MS.gene39641:CDS | 40.0% | |
| ! | ATGGCCGATTCTGAAAATGA+TGG | + | chr4.2:24648446-24648465 | MS.gene39641:intron | 40.0% |
| ! | CACAGTGTAATTGTGGATTG+CGG | + | chr4.2:24647919-24647938 | MS.gene39641:intron | 40.0% |
| ! | CACCCCTTTTACTGTTGAAA+AGG | + | chr4.2:24647752-24647771 | MS.gene39641:intron | 40.0% |
| ! | GGTCAATGGATTCTCAAAGT+CGG | + | chr4.2:24646306-24646325 | MS.gene39641:CDS | 40.0% |
| ! | GTAAAGCTTGACAGCGTTTT+TGG | - | chr4.2:24646175-24646194 | None:intergenic | 40.0% |
| ! | TGGCCGATTCTGAAAATGAT+GGG | + | chr4.2:24648447-24648466 | MS.gene39641:intron | 40.0% |
| ! | TGTGATATGGGATTTTCAGC+AGG | + | chr4.2:24649072-24649091 | MS.gene39641:CDS | 40.0% |
| ! | TTGTGGATTGCGGAAAATAG+CGG | + | chr4.2:24647929-24647948 | MS.gene39641:intron | 40.0% |
| ! | TTTTGATGGAAAGTGGGTGT+TGG | + | chr4.2:24647328-24647347 | MS.gene39641:CDS | 40.0% |
| !! | AACTGTTATCAAGAGCACCT+AGG | - | chr4.2:24646707-24646726 | None:intergenic | 40.0% |
| !! | ACTAGGGTGTTATTGGTACA+TGG | + | chr4.2:24648231-24648250 | MS.gene39641:intron | 40.0% |
| !! | ACTGTTATCAAGAGCACCTA+GGG | - | chr4.2:24646706-24646725 | None:intergenic | 40.0% |
| !! | AGGTTTACCGGAATTTTGAC+CGG | + | chr4.2:24646751-24646770 | MS.gene39641:CDS | 40.0% |
| !! | CGAATAAGGCTTTGTTGATG+AGG | + | chr4.2:24646832-24646851 | MS.gene39641:CDS | 40.0% |
| !! | GTTAGCTCTATCAGTATGTC+TGG | + | chr4.2:24649265-24649284 | MS.gene39641:CDS | 40.0% |
| !! | TCCCTGTTTCTATATCAAGC+TGG | - | chr4.2:24646923-24646942 | None:intergenic | 40.0% |
| !!! | AAGACAAAGACTGGTTTTGG+TGG | + | chr4.2:24647407-24647426 | MS.gene39641:CDS | 40.0% |
| !!! | AGGGGCATCAATTTTCAAGA+GGG | + | chr4.2:24647153-24647172 | MS.gene39641:CDS | 40.0% |
| !!! | GTCTTCGTCATTTTTGACGA+AGG | - | chr4.2:24646262-24646281 | None:intergenic | 40.0% |
| AAGCTTTACCTTCACATCGG+CGG | + | chr4.2:24646186-24646205 | MS.gene39641:CDS | 45.0% | |
| ACGGTAAGGAGTTTATCGGT+TGG | + | chr4.2:24646535-24646554 | MS.gene39641:CDS | 45.0% | |
| AGGATCCAATTGTGACCCTT+TGG | - | chr4.2:24647015-24647034 | None:intergenic | 45.0% | |
| AGGGTCACAATTGGATCCTT+CGG | + | chr4.2:24647016-24647035 | MS.gene39641:CDS | 45.0% | |
| ATAGGAGTTGCTACCACCAA+CGG | - | chr4.2:24649241-24649260 | None:intergenic | 45.0% | |
| ATCACCGACGGAAGAGAATA+AGG | + | chr4.2:24646503-24646522 | MS.gene39641:CDS | 45.0% | |
| ATTGTTGAAGCTCACTCCTC+TGG | + | chr4.2:24647460-24647479 | MS.gene39641:CDS | 45.0% | |
| CACTCCTCTGGATTCACATT+TGG | + | chr4.2:24647472-24647491 | MS.gene39641:CDS | 45.0% | |
| CAGGGAAGATTGTTTCAGAG+TGG | + | chr4.2:24646937-24646956 | MS.gene39641:CDS | 45.0% | |
| CGTTGGAGACGAAATCAACA+CGG | - | chr4.2:24646392-24646411 | None:intergenic | 45.0% | |
| CTCTTGAAAATTGATGCCCC+TGG | - | chr4.2:24647154-24647173 | None:intergenic | 45.0% | |
| CTGATGAGTCCCTTGAATAG+TGG | + | chr4.2:24646873-24646892 | MS.gene39641:CDS | 45.0% | |
| GAACAAAACGATGTCGCTCA+AGG | + | chr4.2:24646285-24646304 | MS.gene39641:CDS | 45.0% | |
| GAATTCCCCGGTCAAAATTC+CGG | - | chr4.2:24646761-24646780 | None:intergenic | 45.0% | |
| GAGATGGTTCAATTGTGGTG+GGG | + | chr4.2:24647204-24647223 | MS.gene39641:CDS | 45.0% | |
| GAGTTTGAAGAGGCTGCAAA+TGG | + | chr4.2:24646663-24646682 | MS.gene39641:CDS | 45.0% | |
| GGAAACAGCATCTTCCCAAA+CGG | - | chr4.2:24646586-24646605 | None:intergenic | 45.0% | |
| GGAGAGAATCCATTTAGCGT+TGG | - | chr4.2:24646220-24646239 | None:intergenic | 45.0% | |
| GGAGATGGTTCAATTGTGGT+GGG | + | chr4.2:24647203-24647222 | MS.gene39641:CDS | 45.0% | |
| GGAGTGAGCTTCAACAATCT+AGG | - | chr4.2:24647458-24647477 | None:intergenic | 45.0% | |
| GGGATGAAGATTGAACGTCT+TGG | - | chr4.2:24646041-24646060 | None:intergenic | 45.0% | |
| GGGCAAGTTCAGTGTGATAT+GGG | + | chr4.2:24649060-24649079 | MS.gene39641:CDS | 45.0% | |
| GGGGTAGCTGTGAAATATGA+AGG | + | chr4.2:24646786-24646805 | MS.gene39641:CDS | 45.0% | |
| GGTATTCAAACCCTAACCCT+AGG | + | chr4.2:24646687-24646706 | MS.gene39641:CDS | 45.0% | |
| GTCGTAATCTGAGTCGGAAT+CGG | - | chr4.2:24645977-24645996 | None:intergenic | 45.0% | |
| GTCTAGAGGTGATTTGATGG+AGG | + | chr4.2:24646641-24646660 | MS.gene39641:CDS | 45.0% | |
| TCAAATGACGGTTATAGCGC+AGG | - | chr4.2:24647988-24648007 | None:intergenic | 45.0% | |
| TCATGGTGGCCATTTCTCAT+GGG | + | chr4.2:24647514-24647533 | MS.gene39641:CDS | 45.0% | |
| TCGGTCTAGAGGTGATTTGA+TGG | + | chr4.2:24646638-24646657 | MS.gene39641:CDS | 45.0% | |
| TGCTTTGCAACAACTGGAGA+TGG | + | chr4.2:24647188-24647207 | MS.gene39641:CDS | 45.0% | |
| TGGAGATGGTTCAATTGTGG+TGG | + | chr4.2:24647202-24647221 | MS.gene39641:CDS | 45.0% | |
| TGGGCAAGTTCAGTGTGATA+TGG | + | chr4.2:24649059-24649078 | MS.gene39641:CDS | 45.0% | |
| TTCAGTGACGAATTTCCGGT+AGG | - | chr4.2:24646448-24646467 | None:intergenic | 45.0% | |
| TTCATGGTGGCCATTTCTCA+TGG | + | chr4.2:24647513-24647532 | MS.gene39641:CDS | 45.0% | |
| TTTGAAGAGGCTGCAAATGG+TGG | + | chr4.2:24646666-24646685 | MS.gene39641:CDS | 45.0% | |
| TTTGACCGGGGAATTCGAAA+GGG | + | chr4.2:24646765-24646784 | MS.gene39641:CDS | 45.0% | |
| ! | CAGTTTTGCATTGGAACCAG+GGG | + | chr4.2:24647135-24647154 | MS.gene39641:CDS | 45.0% |
| ! | CCAGTTTTGCATTGGAACCA+GGG | + | chr4.2:24647134-24647153 | MS.gene39641:CDS | 45.0% |
| ! | CGAGTTCTCCAGTTTTGCAT+TGG | + | chr4.2:24647126-24647145 | MS.gene39641:CDS | 45.0% |
| ! | CGGTAAGGAGTTTATCGGTT+GGG | + | chr4.2:24646536-24646555 | MS.gene39641:CDS | 45.0% |
| ! | CTTCGGAGTCGACGTTTTTA+GGG | + | chr4.2:24647033-24647052 | MS.gene39641:CDS | 45.0% |
| ! | GTCTTTCAGGTCACTGAGAA+TGG | + | chr4.2:24649007-24649026 | MS.gene39641:intron | 45.0% |
| ! | TCCAGTTTTGCATTGGAACC+AGG | + | chr4.2:24647133-24647152 | MS.gene39641:CDS | 45.0% |
| ! | TGCGGAAACTAGGGTGTTAT+TGG | + | chr4.2:24648224-24648243 | MS.gene39641:intron | 45.0% |
| ! | TTTTGACCGGGGAATTCGAA+AGG | + | chr4.2:24646764-24646783 | MS.gene39641:CDS | 45.0% |
| !! | ATCAAGAGCACCTAGGGTTA+GGG | - | chr4.2:24646700-24646719 | None:intergenic | 45.0% |
| !! | ATGCTGGCTTTCAGGTTTAC+CGG | + | chr4.2:24646739-24646758 | MS.gene39641:CDS | 45.0% |
| !! | ATTTTTGACGAAGGCGTAGG+AGG | - | chr4.2:24646253-24646272 | None:intergenic | 45.0% |
| !! | CGTGTTGATTTCGTCTCCAA+CGG | + | chr4.2:24646390-24646409 | MS.gene39641:CDS | 45.0% |
| !! | GAAGATGCTGTTTCCGATGA+TGG | + | chr4.2:24646591-24646610 | MS.gene39641:CDS | 45.0% |
| !! | GAGGTTGGTGGAATGTGATT+GGG | - | chr4.2:24646061-24646080 | None:intergenic | 45.0% |
| !! | GGGTGTTATTGGTACATGGA+TGG | + | chr4.2:24648235-24648254 | MS.gene39641:intron | 45.0% |
| !! | GGTTTACCGGAATTTTGACC+GGG | + | chr4.2:24646752-24646771 | MS.gene39641:CDS | 45.0% |
| !! | GTTTACCGGAATTTTGACCG+GGG | + | chr4.2:24646753-24646772 | MS.gene39641:CDS | 45.0% |
| !! | TATCAAGAGCACCTAGGGTT+AGG | - | chr4.2:24646701-24646720 | None:intergenic | 45.0% |
| !! | TCTCAATGATGCTGGCTTTC+AGG | + | chr4.2:24646731-24646750 | MS.gene39641:CDS | 45.0% |
| !! | TTGACAGCGTTTTTGGGAAG+TGG | - | chr4.2:24646168-24646187 | None:intergenic | 45.0% |
| !!! | ACTGGTTTTGGTGGTCGTAT+GGG | + | chr4.2:24647416-24647435 | MS.gene39641:CDS | 45.0% |
| !!! | CAGGGGCATCAATTTTCAAG+AGG | + | chr4.2:24647152-24647171 | MS.gene39641:CDS | 45.0% |
| !!! | GGGAAGACAAAGACTGGTTT+TGG | + | chr4.2:24647404-24647423 | MS.gene39641:CDS | 45.0% |
| !!! | GTCATTTTTGACGAAGGCGT+AGG | - | chr4.2:24646256-24646275 | None:intergenic | 45.0% |
| !! | ATATTTAAAAAAATTGTAAA+AGG | + | chr4.2:24648508-24648527 | MS.gene39641:intron | 5.0% |
| !!! | TTTTGATTTTTTTTTTTTTT+TGG | + | chr4.2:24648637-24648656 | MS.gene39641:intron | 5.0% |
| AACACCCTAGTTTCCGCACA+TGG | - | chr4.2:24648222-24648241 | None:intergenic | 50.0% | |
| AAGACAGGACTGCAGGGAAA+TGG | + | chr4.2:24648745-24648764 | MS.gene39641:intron | 50.0% | |
| ACGATGTCGCTCAAGGTCAA+TGG | + | chr4.2:24646292-24646311 | MS.gene39641:CDS | 50.0% | |
| AGTAGGGGGGTAAACCTAGT+GGG | + | chr4.2:24648283-24648302 | MS.gene39641:intron | 50.0% | |
| ATCGATGAGGATGGCGAAGA+CGG | + | chr4.2:24647262-24647281 | MS.gene39641:CDS | 50.0% | |
| ATGTGGCGCTCCACTATTCA+AGG | - | chr4.2:24646886-24646905 | None:intergenic | 50.0% | |
| ATTTCGTCTCCAACGGTGTC+TGG | + | chr4.2:24646397-24646416 | MS.gene39641:CDS | 50.0% | |
| CCAGATGCAAGTATGCAGCA+TGG | - | chr4.2:24648900-24648919 | None:intergenic | 50.0% | |
| CCAGCCAAATGTGAATCCAG+AGG | - | chr4.2:24647479-24647498 | None:intergenic | 50.0% | |
| CCATGCTGCATACTTGCATC+TGG | + | chr4.2:24648897-24648916 | MS.gene39641:intron | 50.0% | |
| CCCTGGTTCCAATGCAAAAC+TGG | - | chr4.2:24647137-24647156 | None:intergenic | 50.0% | |
| CCTCTGGATTCACATTTGGC+TGG | + | chr4.2:24647476-24647495 | MS.gene39641:CDS | 50.0% | |
| CGGTTCAAAAATCCGCGCTA+GGG | + | chr4.2:24646326-24646345 | MS.gene39641:CDS | 50.0% | |
| GCAACACTCCCAACGCTAAA+TGG | + | chr4.2:24646208-24646227 | MS.gene39641:CDS | 50.0% | |
| GGTCGTATGGGAAACAGGAT+AGG | + | chr4.2:24647428-24647447 | MS.gene39641:CDS | 50.0% | |
| TAGTAGGGGGGTAAACCTAG+TGG | + | chr4.2:24648282-24648301 | MS.gene39641:intron | 50.0% | |
| TCGGTTCAAAAATCCGCGCT+AGG | + | chr4.2:24646325-24646344 | MS.gene39641:CDS | 50.0% | |
| TGGTTCAGCTTCGAAGCATG+TGG | - | chr4.2:24646903-24646922 | None:intergenic | 50.0% | |
| TGTGGCGCTCCACTATTCAA+GGG | - | chr4.2:24646885-24646904 | None:intergenic | 50.0% | |
| TTCCCAAACGGAATCATCCG+CGG | - | chr4.2:24646574-24646593 | None:intergenic | 50.0% | |
| TTCCCACCGATGAATCCTAC+CGG | + | chr4.2:24646430-24646449 | MS.gene39641:CDS | 50.0% | |
| TTCCGGTAGGATTCATCGGT+GGG | - | chr4.2:24646435-24646454 | None:intergenic | 50.0% | |
| TTGACCGGGGAATTCGAAAG+GGG | + | chr4.2:24646766-24646785 | MS.gene39641:CDS | 50.0% | |
| TTTAAGAGCCCAGACACCGT+TGG | - | chr4.2:24646409-24646428 | None:intergenic | 50.0% | |
| TTTCCGGTAGGATTCATCGG+TGG | - | chr4.2:24646436-24646455 | None:intergenic | 50.0% | |
| TTTCGTCTCCAACGGTGTCT+GGG | + | chr4.2:24646398-24646417 | MS.gene39641:CDS | 50.0% | |
| ! | ATTGTGGTGGGGTCTCTTGA+TGG | + | chr4.2:24647215-24647234 | MS.gene39641:CDS | 50.0% |
| ! | CAGAAAGTGCATGACCCACT+AGG | - | chr4.2:24648300-24648319 | None:intergenic | 50.0% |
| ! | CCTTCGGAGTCGACGTTTTT+AGG | + | chr4.2:24647032-24647051 | MS.gene39641:CDS | 50.0% |
| ! | GTTTATCGGTTGGGTGAAGC+CGG | + | chr4.2:24646545-24646564 | MS.gene39641:CDS | 50.0% |
| ! | TTGGTGGTCGTATGGGAAAC+AGG | + | chr4.2:24647423-24647442 | MS.gene39641:CDS | 50.0% |
| !! | CCTAAAAACGTCGACTCCGA+AGG | - | chr4.2:24647035-24647054 | None:intergenic | 50.0% |
| !! | CGAGGTTGGTGGAATGTGAT+TGG | - | chr4.2:24646062-24646081 | None:intergenic | 50.0% |
| !! | GTTTAGCGTCGACATCATCG+AGG | - | chr4.2:24646080-24646099 | None:intergenic | 50.0% |
| !!! | GACTGGTTTTGGTGGTCGTA+TGG | + | chr4.2:24647415-24647434 | MS.gene39641:CDS | 50.0% |
| !!! | GGAGTCGACGTTTTTAGGGT+TGG | + | chr4.2:24647037-24647056 | MS.gene39641:CDS | 50.0% |
| AAGCCGCGGATGATTCCGTT+TGG | + | chr4.2:24646568-24646587 | MS.gene39641:CDS | 55.0% | |
| ACTCTTCCCGGAGCCATCAT+CGG | - | chr4.2:24646607-24646626 | None:intergenic | 55.0% | |
| ACTTGCCCACAGTCGCAACA+AGG | - | chr4.2:24649048-24649067 | None:intergenic | 55.0% | |
| AGCCGCGGATGATTCCGTTT+GGG | + | chr4.2:24646569-24646588 | MS.gene39641:CDS | 55.0% | |
| ATAAGGCTCCGGACTCTTCC+CGG | - | chr4.2:24646619-24646638 | None:intergenic | 55.0% | |
| CCTCTAGACCGATAAGGCTC+CGG | - | chr4.2:24646630-24646649 | None:intergenic | 55.0% | |
| CGGAAAATTCACGGCCTTCG+CGG | - | chr4.2:24645957-24645976 | None:intergenic | 55.0% | |
| CTACCACCAACGGAGCTTCA+GGG | - | chr4.2:24649231-24649250 | None:intergenic | 55.0% | |
| CTACCCCCTTTCGAATTCCC+CGG | - | chr4.2:24646773-24646792 | None:intergenic | 55.0% | |
| GGAAAATTCACGGCCTTCGC+GGG | - | chr4.2:24645956-24645975 | None:intergenic | 55.0% | |
| GGCGTAGGAGGTTCGTTTGT+CGG | - | chr4.2:24646241-24646260 | None:intergenic | 55.0% | |
| GGTACTTCTCAATCCCGCGA+AGG | + | chr4.2:24645940-24645959 | MS.gene39641:CDS | 55.0% | |
| GTCGACATCATCGAGGTTGG+TGG | - | chr4.2:24646073-24646092 | None:intergenic | 55.0% | |
| TACCACCAACGGAGCTTCAG+GGG | - | chr4.2:24649230-24649249 | None:intergenic | 55.0% | |
| TGACCGGGGAATTCGAAAGG+GGG | + | chr4.2:24646767-24646786 | MS.gene39641:CDS | 55.0% | |
| ! | AAGACGGCTTTTCCTGGGCT+TGG | + | chr4.2:24647278-24647297 | MS.gene39641:CDS | 55.0% |
| ! | ATGGCGAAGACGGCTTTTCC+TGG | + | chr4.2:24647272-24647291 | MS.gene39641:CDS | 55.0% |
| ! | CTGTTTCCGATGATGGCTCC+GGG | + | chr4.2:24646598-24646617 | MS.gene39641:CDS | 55.0% |
| ! | GCTGTTTCCGATGATGGCTC+CGG | + | chr4.2:24646597-24646616 | MS.gene39641:CDS | 55.0% |
| ! | GGAAGAGTCCGGAGCCTTAT+CGG | + | chr4.2:24646619-24646638 | MS.gene39641:CDS | 55.0% |
| ! | TGGCGAAGACGGCTTTTCCT+GGG | + | chr4.2:24647273-24647292 | MS.gene39641:CDS | 55.0% |
| !! | AGCGTCGACATCATCGAGGT+TGG | - | chr4.2:24646076-24646095 | None:intergenic | 55.0% |
| ACGCCACCTTGTTGCGACTG+TGG | + | chr4.2:24649039-24649058 | MS.gene39641:CDS | 60.0% | |
| ACGGAATCATCCGCGGCTTC+CGG | - | chr4.2:24646567-24646586 | None:intergenic | 60.0% | |
| CCTTATTCGGCGTCTCCTGC+CGG | - | chr4.2:24646821-24646840 | None:intergenic | 60.0% | |
| CGCCACCTTGTTGCGACTGT+GGG | + | chr4.2:24649040-24649059 | MS.gene39641:CDS | 60.0% | |
| GCTACCACCAACGGAGCTTC+AGG | - | chr4.2:24649232-24649251 | None:intergenic | 60.0% | |
| GTAATCGGGGAACCAAGCCC+AGG | - | chr4.2:24647293-24647312 | None:intergenic | 60.0% | |
| TGAAGGTGGGAATCTCCGGC+AGG | + | chr4.2:24646803-24646822 | MS.gene39641:CDS | 60.0% | |
| TGATGGCTCCGGGAAGAGTC+CGG | + | chr4.2:24646608-24646627 | MS.gene39641:CDS | 60.0% | |
| TGCCCACAGTCGCAACAAGG+TGG | - | chr4.2:24649045-24649064 | None:intergenic | 60.0% | |
| ! | CCGGAGCCTTATCGGTCTAG+AGG | + | chr4.2:24646627-24646646 | MS.gene39641:CDS | 60.0% |
| ! | GAGTGTTGCCGCCGATGTGA+AGG | - | chr4.2:24646197-24646216 | None:intergenic | 60.0% |
| ! | GTTCGGTGGAAACCCTAGCG+CGG | - | chr4.2:24646341-24646360 | None:intergenic | 60.0% |
| CCGGCAGGAGACGCCGAATA+AGG | + | chr4.2:24646818-24646837 | MS.gene39641:CDS | 65.0% | |
| CGACTCCCCTGAAGCTCCGT+TGG | + | chr4.2:24649222-24649241 | MS.gene39641:CDS | 65.0% | |
| CTCCCCTGAAGCTCCGTTGG+TGG | + | chr4.2:24649225-24649244 | MS.gene39641:CDS | 65.0% | |
| TTGGGTGAAGCCGGAAGCCG+CGG | + | chr4.2:24646554-24646573 | MS.gene39641:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24645937 | 24649303 | 24645937 | ID=MS.gene39641 |
| chr4.2 | mRNA | 24645937 | 24649303 | 24645937 | ID=MS.gene39641.t1;Parent=MS.gene39641 |
| chr4.2 | exon | 24645937 | 24647535 | 24645937 | ID=MS.gene39641.t1.exon1;Parent=MS.gene39641.t1 |
| chr4.2 | CDS | 24645937 | 24647535 | 24645937 | ID=cds.MS.gene39641.t1;Parent=MS.gene39641.t1 |
| chr4.2 | exon | 24649016 | 24649303 | 24649016 | ID=MS.gene39641.t1.exon2;Parent=MS.gene39641.t1 |
| chr4.2 | CDS | 24649016 | 24649303 | 24649016 | ID=cds.MS.gene39641.t1;Parent=MS.gene39641.t1 |
| Gene Sequence |
| Protein sequence |
