Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055886.t1 | XP_013445739.1 | 98.6 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 2.10E-268 | 934.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055886.t1 | Q8L736 | 58.0 | 507 | 163 | 8 | 1 | 497 | 1 | 467 | 1.9e-137 | 490.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055886.t1 | A0A072U1V1 | 98.6 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 1.5e-268 | 934.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055886 | MS.gene057174 | 0.813461 | 2.53E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene060522 | 0.826504 | 2.62E-54 | -1.69E-46 |
| MS.gene055886 | MS.gene065021 | 0.82521 | 5.31E-54 | -1.69E-46 |
| MS.gene055886 | MS.gene066012 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene055886 | MS.gene067785 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene055886 | MS.gene07361 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene055886 | MS.gene07362 | 0.834957 | 2.22E-56 | -1.69E-46 |
| MS.gene055886 | MS.gene074027 | 0.821861 | 3.22E-53 | -1.69E-46 |
| MS.gene055886 | MS.gene08597 | 0.829869 | 4.04E-55 | -1.69E-46 |
| MS.gene055886 | MS.gene20905 | 0.822299 | 2.55E-53 | -1.69E-46 |
| MS.gene055886 | MS.gene21237 | 0.836157 | 1.10E-56 | -1.69E-46 |
| MS.gene055886 | MS.gene32929 | 0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene33909 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene055886 | MS.gene34711 | 0.889576 | 2.14E-73 | -1.69E-46 |
| MS.gene055886 | MS.gene36464 | 0.81081 | 9.58E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene36867 | 0.828944 | 6.78E-55 | -1.69E-46 |
| MS.gene055886 | MS.gene38759 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene39528 | 0.811884 | 5.60E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene39641 | 0.812446 | 4.22E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene41704 | 0.8157 | 8.08E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene42115 | -0.811976 | 5.35E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene43617 | 0.811226 | 7.78E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene44949 | 0.811866 | 5.65E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene45789 | 0.81769 | 2.89E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene48756 | 0.822352 | 2.48E-53 | -1.69E-46 |
| MS.gene055886 | MS.gene49262 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene49868 | 0.812822 | 3.49E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene50738 | 0.835907 | 1.28E-56 | -1.69E-46 |
| MS.gene055886 | MS.gene51894 | 0.814941 | 1.19E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene51935 | 0.816702 | 4.83E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene52994 | 0.816896 | 4.37E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene57518 | 0.818722 | 1.69E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene58303 | 0.800879 | 1.17E-48 | -1.69E-46 |
| MS.gene055886 | MS.gene60757 | 0.813013 | 3.17E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene61153 | 0.822202 | 2.69E-53 | -1.69E-46 |
| MS.gene055886 | MS.gene63905 | 0.806752 | 7.06E-50 | -1.69E-46 |
| MS.gene055886 | MS.gene67008 | 0.804348 | 2.26E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene67010 | 0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene67242 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene71867 | 0.803739 | 3.02E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene72915 | 0.801748 | 7.78E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene73784 | 0.802692 | 4.97E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene75344 | 0.808969 | 2.38E-50 | -1.69E-46 |
| MS.gene055886 | MS.gene81359 | 0.802947 | 4.41E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene82233 | 0.816822 | 4.54E-52 | -1.69E-46 |
| MS.gene055886 | MS.gene83931 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene055886 | MS.gene84733 | 0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene84734 | 0.814679 | 1.36E-51 | -1.69E-46 |
| MS.gene055886 | MS.gene84866 | 0.810085 | 1.37E-50 | -1.69E-46 |
| MS.gene055886 | MS.gene88853 | 0.804414 | 2.19E-49 | -1.69E-46 |
| MS.gene055886 | MS.gene92076 | 0.80121 | 1.00E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055886 | MS.gene013419 | PPI |
| MS.gene34711 | MS.gene055886 | PPI |
| MS.gene032830 | MS.gene055886 | PPI |
| MS.gene074027 | MS.gene055886 | PPI |
| MS.gene91909 | MS.gene055886 | PPI |
| MS.gene06516 | MS.gene055886 | PPI |
| MS.gene059347 | MS.gene055886 | PPI |
| MS.gene055886 | MS.gene83931 | PPI |
| MS.gene055886 | MS.gene63251 | PPI |
| MS.gene25443 | MS.gene055886 | PPI |
| MS.gene055886 | MS.gene049391 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055886.t1 | MTR_8g468030 | 98.592 | 497 | 7 | 0 | 1 | 497 | 1 | 497 | 0.0 | 1022 |
| MS.gene055886.t1 | MTR_5g039390 | 72.941 | 510 | 91 | 7 | 1 | 497 | 1 | 476 | 0.0 | 743 |
| MS.gene055886.t1 | MTR_4g108280 | 62.803 | 371 | 135 | 2 | 130 | 497 | 10 | 380 | 6.42e-175 | 497 |
| MS.gene055886.t1 | MTR_0345s0010 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 4.83e-164 | 471 |
| MS.gene055886.t1 | MTR_0105s0170 | 62.323 | 353 | 132 | 1 | 145 | 497 | 97 | 448 | 3.63e-163 | 469 |
| MS.gene055886.t1 | MTR_0105s0130 | 62.323 | 353 | 132 | 1 | 145 | 497 | 84 | 435 | 4.41e-163 | 469 |
| MS.gene055886.t1 | MTR_0105s0020 | 61.473 | 353 | 135 | 1 | 145 | 497 | 84 | 435 | 2.36e-162 | 467 |
| MS.gene055886.t1 | MTR_4g022260 | 61.944 | 360 | 136 | 1 | 138 | 497 | 59 | 417 | 2.67e-162 | 466 |
| MS.gene055886.t1 | MTR_0105s0040 | 62.323 | 353 | 132 | 1 | 145 | 497 | 182 | 533 | 2.72e-162 | 471 |
| MS.gene055886.t1 | MTR_0496s0010 | 60.833 | 360 | 134 | 2 | 138 | 497 | 59 | 411 | 1.45e-160 | 461 |
| MS.gene055886.t1 | MTR_1330s0010 | 61.960 | 347 | 131 | 1 | 145 | 491 | 97 | 442 | 4.30e-159 | 459 |
| MS.gene055886.t1 | MTR_4g022400 | 60.169 | 354 | 140 | 1 | 144 | 497 | 62 | 414 | 3.72e-154 | 445 |
| MS.gene055886.t1 | MTR_2g094093 | 51.130 | 354 | 160 | 4 | 149 | 497 | 19 | 364 | 4.32e-117 | 349 |
| MS.gene055886.t1 | MTR_7g029290 | 36.031 | 383 | 217 | 10 | 122 | 495 | 38 | 401 | 5.03e-67 | 221 |
| MS.gene055886.t1 | MTR_6g023805 | 37.466 | 363 | 193 | 8 | 151 | 495 | 57 | 403 | 5.68e-64 | 213 |
| MS.gene055886.t1 | MTR_0105s0060 | 62.637 | 91 | 34 | 0 | 407 | 497 | 15 | 105 | 1.79e-36 | 130 |
| MS.gene055886.t1 | MTR_3g085570 | 27.306 | 271 | 168 | 8 | 124 | 373 | 5 | 267 | 1.95e-21 | 96.3 |
| MS.gene055886.t1 | MTR_8g080370 | 26.531 | 245 | 155 | 6 | 146 | 373 | 47 | 283 | 3.66e-16 | 80.5 |
| MS.gene055886.t1 | MTR_3g073640 | 24.642 | 349 | 187 | 12 | 150 | 429 | 43 | 384 | 4.44e-16 | 80.9 |
| MS.gene055886.t1 | MTR_4g114110 | 25.649 | 308 | 200 | 10 | 126 | 422 | 58 | 347 | 4.83e-16 | 80.9 |
| MS.gene055886.t1 | MTR_8g085600 | 26.056 | 284 | 182 | 9 | 150 | 422 | 77 | 343 | 1.20e-15 | 79.3 |
| MS.gene055886.t1 | MTR_2g008440 | 24.438 | 356 | 190 | 11 | 146 | 429 | 39 | 387 | 1.16e-14 | 76.6 |
| MS.gene055886.t1 | MTR_4g011900 | 22.255 | 337 | 220 | 7 | 150 | 460 | 5 | 325 | 1.44e-14 | 75.5 |
| MS.gene055886.t1 | MTR_7g095220 | 21.605 | 324 | 207 | 7 | 148 | 454 | 2 | 295 | 1.40e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055886.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene055886.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene055886.t1 | AT2G02870 | 58.268 | 508 | 160 | 11 | 1 | 497 | 1 | 467 | 0.0 | 554 |
| MS.gene055886.t1 | AT1G14330 | 69.841 | 378 | 108 | 3 | 123 | 497 | 67 | 441 | 0.0 | 541 |
| MS.gene055886.t1 | AT1G26930 | 67.935 | 368 | 115 | 1 | 133 | 497 | 54 | 421 | 0.0 | 525 |
| MS.gene055886.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.74e-169 | 484 |
| MS.gene055886.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.74e-169 | 484 |
| MS.gene055886.t1 | AT1G74510 | 65.169 | 356 | 115 | 2 | 151 | 497 | 96 | 451 | 7.74e-169 | 484 |
| MS.gene055886.t1 | AT1G26930 | 57.609 | 368 | 101 | 2 | 133 | 497 | 54 | 369 | 8.39e-147 | 425 |
| MS.gene055886.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 2.13e-109 | 330 |
| MS.gene055886.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 2.13e-109 | 330 |
| MS.gene055886.t1 | AT5G60570 | 47.297 | 370 | 180 | 6 | 134 | 497 | 33 | 393 | 2.13e-109 | 330 |
| MS.gene055886.t1 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.18e-63 | 213 |
| MS.gene055886.t1 | AT3G27150 | 35.655 | 359 | 208 | 9 | 151 | 495 | 71 | 420 | 1.18e-63 | 213 |
| MS.gene055886.t1 | AT5G40680 | 33.611 | 360 | 222 | 6 | 146 | 495 | 61 | 413 | 3.45e-59 | 201 |
| MS.gene055886.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.88e-22 | 98.2 |
| MS.gene055886.t1 | AT1G16250 | 24.024 | 333 | 219 | 8 | 145 | 454 | 3 | 324 | 4.88e-22 | 98.2 |
| MS.gene055886.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.07e-20 | 94.4 |
| MS.gene055886.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.07e-20 | 94.4 |
| MS.gene055886.t1 | AT1G67480 | 28.151 | 238 | 152 | 5 | 150 | 373 | 39 | 271 | 1.07e-20 | 94.4 |
| MS.gene055886.t1 | AT1G15670 | 25.937 | 347 | 208 | 13 | 150 | 466 | 3 | 330 | 2.26e-17 | 84.0 |
| MS.gene055886.t1 | AT1G55270 | 25.352 | 284 | 184 | 10 | 150 | 422 | 78 | 344 | 1.05e-15 | 79.7 |
| MS.gene055886.t1 | AT1G80440 | 24.924 | 329 | 211 | 11 | 150 | 457 | 3 | 316 | 1.08e-13 | 72.8 |
| MS.gene055886.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 2 | 214 | 2.68e-13 | 71.6 |
| MS.gene055886.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 3.12e-13 | 71.6 |
| MS.gene055886.t1 | AT3G63220 | 23.832 | 214 | 145 | 4 | 148 | 344 | 9 | 221 | 3.12e-13 | 71.6 |
Find 146 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATTCATGCCGGATT+TGG | 0.208968 | 8.3:-42524803 | MS.gene055886:CDS |
| GGAGATAGGCTTATTGTTAT+TGG | 0.237398 | 8.3:-42523548 | MS.gene055886:CDS |
| TTCCTGGGCTTGATCATGTT+TGG | 0.245172 | 8.3:+42523917 | None:intergenic |
| ACGGTTGGGGTCTTGCATTT+AGG | 0.270827 | 8.3:-42523577 | MS.gene055886:CDS |
| TCCTGGGCTTGATCATGTTT+GGG | 0.274266 | 8.3:+42523918 | None:intergenic |
| CGGTTGGGGTCTTGCATTTA+GGG | 0.286736 | 8.3:-42523576 | MS.gene055886:CDS |
| TGCATCCACCGTTCGCGAAT+TGG | 0.289308 | 8.3:+42524232 | None:intergenic |
| CGATGTTCGAGGTCCGATTA+TGG | 0.296180 | 8.3:-42524391 | MS.gene055886:CDS |
| TTGACAAACTCGTGGGAATC+TGG | 0.303822 | 8.3:-42524085 | MS.gene055886:CDS |
| GGTACCGAACTTCTTGTGTT+TGG | 0.310632 | 8.3:-42524148 | MS.gene055886:CDS |
| CATTCGTTAGAAGCCATTCT+AGG | 0.314758 | 8.3:+42524205 | None:intergenic |
| TACCCCAGAGCACATCTTCC+TGG | 0.332847 | 8.3:+42523901 | None:intergenic |
| CATTTAGGGCATGTGGAGAT+AGG | 0.347335 | 8.3:-42523562 | MS.gene055886:CDS |
| GTACCGAACTTCTTGTGTTT+GGG | 0.354894 | 8.3:-42524147 | MS.gene055886:CDS |
| CGCAGCCGAGGAAGGTTAAC+AGG | 0.363634 | 8.3:-42524738 | MS.gene055886:CDS |
| TGCCTCTGCCTGACAAGAAC+TGG | 0.372108 | 8.3:+42524843 | None:intergenic |
| CCGTTCGCGAATTGGATCAT+AGG | 0.379832 | 8.3:+42524240 | None:intergenic |
| TGTTTCCCATGTTTGATTCT+CGG | 0.387447 | 8.3:+42523943 | None:intergenic |
| AGAGCTTCCGCAACATAATT+CGG | 0.411413 | 8.3:-42524348 | MS.gene055886:CDS |
| CGAGGCAAGTGAACCATAAT+CGG | 0.416718 | 8.3:+42524378 | None:intergenic |
| TAACGAATGCTTCATGTGTT+CGG | 0.419509 | 8.3:-42524191 | MS.gene055886:CDS |
| CAGAAGAAGCAGCTTGATGA+TGG | 0.421720 | 8.3:-42524538 | MS.gene055886:CDS |
| TGTCACCCGGGCGTAGTGCT+AGG | 0.424613 | 8.3:-42523763 | MS.gene055886:CDS |
| CTACGCCCGGGTGACATGTT+AGG | 0.424620 | 8.3:+42523770 | None:intergenic |
| GCTTACAATTGGTAGATTAC+CGG | 0.426080 | 8.3:-42523618 | MS.gene055886:CDS |
| AATCTCCTGTTAACCTTCCT+CGG | 0.429428 | 8.3:+42524733 | None:intergenic |
| TGTTGTTCCGCAAATCGATC+TGG | 0.429697 | 8.3:-42524680 | MS.gene055886:CDS |
| AGGCAGAGGCAGAGAACAAT+TGG | 0.435851 | 8.3:-42524831 | MS.gene055886:CDS |
| GATGTGCTCTGGGGTATTCA+TGG | 0.436117 | 8.3:-42523894 | MS.gene055886:CDS |
| ATGCTTCATGTGTTCGGATA+AGG | 0.437733 | 8.3:-42524185 | MS.gene055886:CDS |
| TTTCCTGTGCCCTCCTCGAA+TGG | 0.437962 | 8.3:-42524267 | MS.gene055886:CDS |
| GTGGATGCATTTACCTAGAA+TGG | 0.438443 | 8.3:-42524218 | MS.gene055886:CDS |
| TTCCTGTGCCCTCCTCGAAT+GGG | 0.440155 | 8.3:-42524266 | MS.gene055886:CDS |
| GCAATTATAAACAAAGTTAC+CGG | 0.440298 | 8.3:+42523430 | None:intergenic |
| AGCAGCTTCGATGAACGGTT+GGG | 0.443209 | 8.3:-42523591 | MS.gene055886:CDS |
| GGTGGTGCCTCGGCTGTGGC+AGG | 0.444795 | 8.3:+42523728 | None:intergenic |
| AAGCCCAGGAAGATGTGCTC+TGG | 0.455338 | 8.3:-42523905 | MS.gene055886:CDS |
| GCACTTTGGCAATCATTCAA+TGG | 0.457578 | 8.3:+42524631 | None:intergenic |
| AACAAAGTGTGGCTTACAAT+TGG | 0.460894 | 8.3:-42523629 | MS.gene055886:CDS |
| GTCACCCGGGCGTAGTGCTA+GGG | 0.467230 | 8.3:-42523762 | MS.gene055886:CDS |
| TTCCAGTTCTTGTCAGGCAG+AGG | 0.467981 | 8.3:-42524845 | MS.gene055886:CDS |
| TGTTTATAATTGCGCCGTGA+TGG | 0.469236 | 8.3:-42523420 | MS.gene055886:CDS |
| GTTGGAAGGTCGTTCCTGCT+TGG | 0.471319 | 8.3:-42524881 | MS.gene055886:CDS |
| CCTGTCTAAGCCGATGTTCG+AGG | 0.471774 | 8.3:-42524402 | MS.gene055886:CDS |
| GCAGAACCAAACAAGCATCT+TGG | 0.482493 | 8.3:+42524046 | None:intergenic |
| AGATTGGAATCTTGTTATCA+AGG | 0.484042 | 8.3:-42524715 | MS.gene055886:CDS |
| AAACCCTCGCCATGACTCCT+TGG | 0.487015 | 8.3:+42523521 | None:intergenic |
| GAGGAAGGTTAACAGGAGAT+TGG | 0.488758 | 8.3:-42524731 | MS.gene055886:CDS |
| CTCCCATTCGAGGAGGGCAC+AGG | 0.491441 | 8.3:+42524264 | None:intergenic |
| GAACAGAAGCAGCATCATGC+AGG | 0.492940 | 8.3:-42524481 | MS.gene055886:CDS |
| GTTTATAATTGCGCCGTGAT+GGG | 0.493022 | 8.3:-42523419 | MS.gene055886:CDS |
| TAGAGGTGGTGCCTCGGCTG+TGG | 0.497106 | 8.3:+42523724 | None:intergenic |
| CCTCGAACATCGGCTTAGAC+AGG | 0.497131 | 8.3:+42524402 | None:intergenic |
| GTCGTTCCTGCTTGGTTCCG+AGG | 0.503606 | 8.3:-42524873 | MS.gene055886:CDS |
| TGCTGCTTCTGTTCATCCGT+CGG | 0.504235 | 8.3:+42524490 | None:intergenic |
| GAGCAGCTTCGATGAACGGT+TGG | 0.506989 | 8.3:-42523592 | MS.gene055886:CDS |
| TTCATCGAAGCTGCTCTCTC+CGG | 0.508226 | 8.3:+42523599 | None:intergenic |
| AGCCCAGGAAGATGTGCTCT+GGG | 0.511106 | 8.3:-42523904 | MS.gene055886:CDS |
| CTGTTAACCTTCCTCGGCTG+CGG | 0.511143 | 8.3:+42524739 | None:intergenic |
| GATAGGCTTATTGTTATTGG+CGG | 0.511196 | 8.3:-42523545 | MS.gene055886:CDS |
| GGTCTTGCATTTAGGGCATG+TGG | 0.511219 | 8.3:-42523569 | MS.gene055886:CDS |
| GTCTTTCATGAAATTCATGC+CGG | 0.514207 | 8.3:-42524809 | MS.gene055886:CDS |
| CGATCCCCTAGCACTACGCC+CGG | 0.523209 | 8.3:+42523757 | None:intergenic |
| CATAATCGGACCTCGAACAT+CGG | 0.525197 | 8.3:+42524392 | None:intergenic |
| CCGAACTTCTTGTGTTTGGG+AGG | 0.526756 | 8.3:-42524144 | MS.gene055886:CDS |
| CATTGTGGAGGTCCTTCACT+AGG | 0.527917 | 8.3:+42523476 | None:intergenic |
| CTCACCGCAGGTAAGAAGCT+TGG | 0.528534 | 8.3:+42523829 | None:intergenic |
| GACTGTATCTGTATATAACA+TGG | 0.528568 | 8.3:+42524110 | None:intergenic |
| AGAGAGATTGCAATTCTAGC+TGG | 0.531625 | 8.3:-42524016 | MS.gene055886:CDS |
| GATCATAGGCCTCCCATTCG+AGG | 0.531967 | 8.3:+42524254 | None:intergenic |
| CGCCGCTGATTATGCTGACA+TGG | 0.534149 | 8.3:-42523675 | MS.gene055886:CDS |
| ACCCCAGAGCACATCTTCCT+GGG | 0.535814 | 8.3:+42523902 | None:intergenic |
| CCTCCCAAACACAAGAAGTT+CGG | 0.539106 | 8.3:+42524144 | None:intergenic |
| CGGGCGTAGTGCTAGGGGAT+CGG | 0.539496 | 8.3:-42523756 | MS.gene055886:CDS |
| TTCATCCGTCGGCTCGTCAG+TGG | 0.539654 | 8.3:+42524501 | None:intergenic |
| CTACTTGCTAGAAAACAATC+CGG | 0.542893 | 8.3:-42523449 | MS.gene055886:CDS |
| TCATCATCCAGATCGATTTG+CGG | 0.545355 | 8.3:+42524673 | None:intergenic |
| ATCTTGTTATCAAGGTGAGA+TGG | 0.548591 | 8.3:-42524707 | MS.gene055886:CDS |
| TATCGTTGGCGGAGACTGAA+CGG | 0.553625 | 8.3:-42524313 | MS.gene055886:CDS |
| GCAGCTTCGATGAACGGTTG+GGG | 0.555988 | 8.3:-42523590 | MS.gene055886:CDS |
| AGCTACTAGAGGTGGTGCCT+CGG | 0.556190 | 8.3:+42523718 | None:intergenic |
| CGAACTTCTTGTGTTTGGGA+GGG | 0.560794 | 8.3:-42524143 | MS.gene055886:CDS |
| ATTCTCGGAGTTATAGAGCT+CGG | 0.569093 | 8.3:+42523958 | None:intergenic |
| TAATTCCACTGACGAGCCGA+CGG | 0.571828 | 8.3:-42524506 | MS.gene055886:CDS |
| GATAAGGAGTCTTTAGCGGT+AGG | 0.574089 | 8.3:-42524169 | MS.gene055886:CDS |
| GCTGGTGGTTGTGATTCAGA+TGG | 0.575080 | 8.3:-42523998 | MS.gene055886:CDS |
| CTGTGCCCTCCTCGAATGGG+AGG | 0.576298 | 8.3:-42524263 | MS.gene055886:CDS |
| GGAGATGCCTGCCACAGCCG+AGG | 0.577171 | 8.3:-42523735 | MS.gene055886:CDS |
| TTCGGATAAGGAGTCTTTAG+CGG | 0.577829 | 8.3:-42524173 | MS.gene055886:CDS |
| ATGATCCAATTCGCGAACGG+TGG | 0.578353 | 8.3:-42524237 | MS.gene055886:CDS |
| TGCTCTGGGGTATTCATGGA+TGG | 0.578417 | 8.3:-42523890 | MS.gene055886:CDS |
| AACAGAAGCAGCATCATGCA+GGG | 0.580432 | 8.3:-42524480 | MS.gene055886:CDS |
| TATAGAGCTCGGCCGAGTCA+AGG | 0.584279 | 8.3:+42523969 | None:intergenic |
| AAACAACCTCGGAACCAAGC+AGG | 0.584981 | 8.3:+42524867 | None:intergenic |
| GAGATTGCAATTCTAGCTGG+TGG | 0.586483 | 8.3:-42524013 | MS.gene055886:CDS |
| ATGAAGATGAACCGCAGCCG+AGG | 0.586920 | 8.3:-42524750 | MS.gene055886:CDS |
| ATTGGCGGACCAAGGAGTCA+TGG | 0.588019 | 8.3:-42523530 | MS.gene055886:CDS |
| GAAATTCCTAACATGTCACC+CGG | 0.589237 | 8.3:-42523776 | MS.gene055886:CDS |
| GAGAGAGCAGCTTCGATGAA+CGG | 0.590084 | 8.3:-42523596 | MS.gene055886:CDS |
| GCGGTGAGCTCTATCGTTGG+CGG | 0.596893 | 8.3:-42524324 | MS.gene055886:CDS |
| ACGATAAAGGTAACAAAGTG+TGG | 0.600614 | 8.3:-42523640 | MS.gene055886:CDS |
| TCCCAAACATGATCAAGCCC+AGG | 0.608139 | 8.3:-42523919 | MS.gene055886:CDS |
| AGATGAACCGCAGCCGAGGA+AGG | 0.608999 | 8.3:-42524746 | MS.gene055886:CDS |
| CTGGTGGTTGTGATTCAGAT+GGG | 0.609342 | 8.3:-42523997 | MS.gene055886:CDS |
| AGAAGAAGCAGCTTGATGAT+GGG | 0.610932 | 8.3:-42524537 | MS.gene055886:CDS |
| TCACCCGGGCGTAGTGCTAG+GGG | 0.612909 | 8.3:-42523761 | MS.gene055886:CDS |
| ACTCGTGGGAATCTGGAATG+AGG | 0.616994 | 8.3:-42524078 | MS.gene055886:CDS |
| GGACCAAGGAGTCATGGCGA+GGG | 0.620296 | 8.3:-42523524 | MS.gene055886:CDS |
| TTATTTACAACAGCTACTAG+AGG | 0.621989 | 8.3:+42523707 | None:intergenic |
| CGGACCAAGGAGTCATGGCG+AGG | 0.624374 | 8.3:-42523525 | MS.gene055886:CDS |
| AATTCTTCAGCATCCCATCA+CGG | 0.624527 | 8.3:+42523406 | None:intergenic |
| AATTCATGGGTTCCTAGTGA+AGG | 0.624631 | 8.3:-42523488 | MS.gene055886:CDS |
| TCTGGATGATGATCAGAGGA+AGG | 0.626736 | 8.3:-42524662 | MS.gene055886:CDS |
| ACTGTATCTGTATATAACAT+GGG | 0.627241 | 8.3:+42524111 | None:intergenic |
| AGATGGGCATATCCTTGACT+CGG | 0.628226 | 8.3:-42523981 | MS.gene055886:CDS |
| TTTACAACAGCTACTAGAGG+TGG | 0.628438 | 8.3:+42523710 | None:intergenic |
| TGAACGGTATCATAGAGCAC+TGG | 0.630163 | 8.3:-42524297 | MS.gene055886:CDS |
| CACCGCTCCGAATTATGTTG+CGG | 0.630361 | 8.3:+42524341 | None:intergenic |
| TTATTGTTATTGGCGGACCA+AGG | 0.631861 | 8.3:-42523538 | MS.gene055886:CDS |
| TAAATTGTACTCCTCACCGC+AGG | 0.632793 | 8.3:+42523817 | None:intergenic |
| ATAACTCCGAGAATCAAACA+TGG | 0.632851 | 8.3:-42523949 | MS.gene055886:CDS |
| GATCCCCTAGCACTACGCCC+GGG | 0.636164 | 8.3:+42523758 | None:intergenic |
| GCAAGTAGATTCCATTGTGG+AGG | 0.637868 | 8.3:+42523464 | None:intergenic |
| TCGATCTGGATGATGATCAG+AGG | 0.644226 | 8.3:-42524666 | MS.gene055886:CDS |
| GGAGCGGTGAGCTCTATCGT+TGG | 0.649703 | 8.3:-42524327 | MS.gene055886:CDS |
| CAAGAACTGGAAAACAACCT+CGG | 0.650518 | 8.3:+42524856 | None:intergenic |
| CAAGCTTCTTACCTGCGGTG+AGG | 0.651811 | 8.3:-42523828 | MS.gene055886:CDS |
| ATTGAATGATTGCCAAAGTG+CGG | 0.655209 | 8.3:-42524629 | MS.gene055886:CDS |
| CGCTGATTATGCTGACATGG+AGG | 0.655991 | 8.3:-42523672 | MS.gene055886:CDS |
| GATTCCAAGCTTCTTACCTG+CGG | 0.656931 | 8.3:-42523833 | MS.gene055886:CDS |
| ATAGGCCTCCCATTCGAGGA+GGG | 0.657950 | 8.3:+42524258 | None:intergenic |
| CTCCATGTCAGCATAATCAG+CGG | 0.662179 | 8.3:+42523673 | None:intergenic |
| CCTATGATCCAATTCGCGAA+CGG | 0.662545 | 8.3:-42524240 | MS.gene055886:CDS |
| TAACTCCGAGAATCAAACAT+GGG | 0.666523 | 8.3:-42523948 | MS.gene055886:CDS |
| CTAGAATTGCAATCTCTCTG+AGG | 0.668609 | 8.3:+42524020 | None:intergenic |
| CTAGTGAAGGACCTCCACAA+TGG | 0.672606 | 8.3:-42523475 | MS.gene055886:CDS |
| CATAGGCCTCCCATTCGAGG+AGG | 0.672969 | 8.3:+42524257 | None:intergenic |
| CTAGCAAGTAGATTCCATTG+TGG | 0.677748 | 8.3:+42523461 | None:intergenic |
| ACAATTTACAGACTAGAACA+TGG | 0.682806 | 8.3:-42523802 | MS.gene055886:CDS |
| AAATTCCTAACATGTCACCC+GGG | 0.697406 | 8.3:-42523775 | MS.gene055886:CDS |
| ACAGAAGCAGCATCATGCAG+GGG | 0.699667 | 8.3:-42524479 | MS.gene055886:CDS |
| GAGCTGTCCCGATTCATGCG+CGG | 0.706639 | 8.3:+42524430 | None:intergenic |
| GCTGCAAAGACTATGTTGGA+AGG | 0.710611 | 8.3:-42524895 | None:intergenic |
| GCCCAGGAAGATGTGCTCTG+GGG | 0.715567 | 8.3:-42523903 | MS.gene055886:CDS |
| TTCCGCAACATAATTCGGAG+CGG | 0.727088 | 8.3:-42524343 | MS.gene055886:CDS |
| GCGGAAGCTCTGATTCAGCG+AGG | 0.753966 | 8.3:+42524360 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGGAAATTTTTATGTTATC+GGG | - | chr8.3:42524424-42524443 | MS.gene055886:CDS | 20.0% |
| !!! | GATGGAAATTTTTATGTTAT+CGG | - | chr8.3:42524423-42524442 | MS.gene055886:CDS | 20.0% |
| ! | ACTGTATCTGTATATAACAT+GGG | + | chr8.3:42524187-42524206 | None:intergenic | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | + | chr8.3:42524868-42524887 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGTTATCG+GGG | - | chr8.3:42524425-42524444 | MS.gene055886:CDS | 25.0% |
| !! | TTTTATCGAACTCAATTCAT+GGG | - | chr8.3:42524794-42524813 | MS.gene055886:CDS | 25.0% |
| ACAATTTACAGACTAGAACA+TGG | - | chr8.3:42524493-42524512 | MS.gene055886:CDS | 30.0% | |
| CCGGATTTGGAAATAAAAAA+CGG | - | chr8.3:42523505-42523524 | MS.gene055886:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | + | chr8.3:42524188-42524207 | None:intergenic | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | + | chr8.3:42524591-42524610 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | - | chr8.3:42524243-42524262 | MS.gene055886:CDS | 30.0% |
| ! | AGATTGGAATCTTGTTATCA+AGG | - | chr8.3:42523580-42523599 | MS.gene055886:CDS | 30.0% |
| ! | GAGGTTAAAAAGTACGATAA+AGG | - | chr8.3:42524642-42524661 | MS.gene055886:CDS | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | - | chr8.3:42524426-42524445 | MS.gene055886:CDS | 30.0% |
| ! | GTTTTATCGAACTCAATTCA+TGG | - | chr8.3:42524793-42524812 | MS.gene055886:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | + | chr8.3:42523508-42523527 | None:intergenic | 30.0% |
| !!! | TGCTTTTTCTGTCATGTTTT+TGG | - | chr8.3:42523699-42523718 | MS.gene055886:CDS | 30.0% |
| AACAAAGTGTGGCTTACAAT+TGG | - | chr8.3:42524666-42524685 | MS.gene055886:CDS | 35.0% | |
| ACGATAAAGGTAACAAAGTG+TGG | - | chr8.3:42524655-42524674 | MS.gene055886:CDS | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | - | chr8.3:42524346-42524365 | MS.gene055886:CDS | 35.0% | |
| ATTGAATGATTGCCAAAGTG+CGG | - | chr8.3:42523666-42523685 | MS.gene055886:CDS | 35.0% | |
| GAAATAAAAAACGGAAAGCG+AGG | - | chr8.3:42523514-42523533 | MS.gene055886:CDS | 35.0% | |
| GCTTACAATTGGTAGATTAC+CGG | - | chr8.3:42524677-42524696 | MS.gene055886:CDS | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | - | chr8.3:42524747-42524766 | MS.gene055886:CDS | 35.0% | |
| GTCTTTCATGAAATTCATGC+CGG | - | chr8.3:42523486-42523505 | MS.gene055886:CDS | 35.0% | |
| TAACGAATGCTTCATGTGTT+CGG | - | chr8.3:42524104-42524123 | MS.gene055886:CDS | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | - | chr8.3:42524347-42524366 | MS.gene055886:CDS | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | + | chr8.3:42524355-42524374 | None:intergenic | 35.0% | |
| ! | ATCTTGTTATCAAGGTGAGA+TGG | - | chr8.3:42523588-42523607 | MS.gene055886:CDS | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | - | chr8.3:42524846-42524865 | MS.gene055886:CDS | 35.0% |
| ! | GATAGGCTTATTGTTATTGG+CGG | - | chr8.3:42524750-42524769 | MS.gene055886:CDS | 35.0% |
| ! | TTTTATGTTATCGGGGGAAT+TGG | - | chr8.3:42524432-42524451 | MS.gene055886:CDS | 35.0% |
| AAATTCCTAACATGTCACCC+GGG | - | chr8.3:42524520-42524539 | MS.gene055886:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | + | chr8.3:42523565-42523584 | None:intergenic | 40.0% | |
| AATTCATGGGTTCCTAGTGA+AGG | - | chr8.3:42524807-42524826 | MS.gene055886:CDS | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | - | chr8.3:42524279-42524298 | MS.gene055886:CDS | 40.0% | |
| AGAGCTTCCGCAACATAATT+CGG | - | chr8.3:42523947-42523966 | MS.gene055886:CDS | 40.0% | |
| ATGCTTCATGTGTTCGGATA+AGG | - | chr8.3:42524110-42524129 | MS.gene055886:CDS | 40.0% | |
| ATTCTCGGAGTTATAGAGCT+CGG | + | chr8.3:42524340-42524359 | None:intergenic | 40.0% | |
| CAAGAACTGGAAAACAACCT+CGG | + | chr8.3:42523442-42523461 | None:intergenic | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | - | chr8.3:42523492-42523511 | MS.gene055886:CDS | 40.0% | |
| CATTCGTTAGAAGCCATTCT+AGG | + | chr8.3:42524093-42524112 | None:intergenic | 40.0% | |
| CTAGAATTGCAATCTCTCTG+AGG | + | chr8.3:42524278-42524297 | None:intergenic | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | + | chr8.3:42524837-42524856 | None:intergenic | 40.0% | |
| GAAAAATCGCAGCATTCGTT+CGG | - | chr8.3:42523724-42523743 | MS.gene055886:CDS | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | - | chr8.3:42524519-42524538 | MS.gene055886:CDS | 40.0% | |
| GCACTTTGGCAATCATTCAA+TGG | + | chr8.3:42523667-42523686 | None:intergenic | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | - | chr8.3:42524148-42524167 | MS.gene055886:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | - | chr8.3:42524077-42524096 | MS.gene055886:CDS | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | - | chr8.3:42524876-42524895 | MS.gene055886:CDS | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | - | chr8.3:42524875-42524894 | MS.gene055886:CDS | 40.0% | |
| TTCGGATAAGGAGTCTTTAG+CGG | - | chr8.3:42524122-42524141 | MS.gene055886:CDS | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | + | chr8.3:42524588-42524607 | None:intergenic | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | - | chr8.3:42524202-42524221 | MS.gene055886:CDS | 40.0% |
| ! | AGAAGAAGCAGCTTGATGAT+GGG | - | chr8.3:42523758-42523777 | MS.gene055886:CDS | 40.0% |
| ! | CAACAACATTTTCCGCACTT+TGG | + | chr8.3:42523681-42523700 | None:intergenic | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | - | chr8.3:42524203-42524222 | MS.gene055886:CDS | 40.0% |
| ! | TTATTGTTATTGGCGGACCA+AGG | - | chr8.3:42524757-42524776 | MS.gene055886:CDS | 40.0% |
| !! | GTTGTTTTCCAGTTCTTGTC+AGG | - | chr8.3:42523444-42523463 | MS.gene055886:CDS | 40.0% |
| !! | TCATCATCCAGATCGATTTG+CGG | + | chr8.3:42523625-42523644 | None:intergenic | 40.0% |
| AACAGAAGCAGCATCATGCA+GGG | - | chr8.3:42523815-42523834 | MS.gene055886:CDS | 45.0% | |
| AGATGGGCATATCCTTGACT+CGG | - | chr8.3:42524314-42524333 | MS.gene055886:CDS | 45.0% | |
| CAGAAGAAGCAGCTTGATGA+TGG | - | chr8.3:42523757-42523776 | MS.gene055886:CDS | 45.0% | |
| CATAATCGGACCTCGAACAT+CGG | + | chr8.3:42523906-42523925 | None:intergenic | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | - | chr8.3:42524055-42524074 | MS.gene055886:CDS | 45.0% | |
| CCTCCCAAACACAAGAAGTT+CGG | + | chr8.3:42524154-42524173 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | - | chr8.3:42524152-42524171 | MS.gene055886:CDS | 45.0% | |
| CGAGGCAAGTGAACCATAAT+CGG | + | chr8.3:42523920-42523939 | None:intergenic | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | + | chr8.3:42524625-42524644 | None:intergenic | 45.0% | |
| CTGGTGGTTGTGATTCAGAT+GGG | - | chr8.3:42524298-42524317 | MS.gene055886:CDS | 45.0% | |
| GAGGAAGGTTAACAGGAGAT+TGG | - | chr8.3:42523564-42523583 | MS.gene055886:CDS | 45.0% | |
| GATAAGGAGTCTTTAGCGGT+AGG | - | chr8.3:42524126-42524145 | MS.gene055886:CDS | 45.0% | |
| GATTCCAAGCTTCTTACCTG+CGG | - | chr8.3:42524462-42524481 | MS.gene055886:CDS | 45.0% | |
| GCAAGTAGATTCCATTGTGG+AGG | + | chr8.3:42524834-42524853 | None:intergenic | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | + | chr8.3:42524252-42524271 | None:intergenic | 45.0% | |
| TAAATTGTACTCCTCACCGC+AGG | + | chr8.3:42524481-42524500 | None:intergenic | 45.0% | |
| TATGTTATCGGGGGAATTGG+TGG | - | chr8.3:42524435-42524454 | MS.gene055886:CDS | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | + | chr8.3:42524380-42524399 | None:intergenic | 45.0% | |
| TCGATCTGGATGATGATCAG+AGG | - | chr8.3:42523629-42523648 | MS.gene055886:CDS | 45.0% | |
| TCTGGATGATGATCAGAGGA+AGG | - | chr8.3:42523633-42523652 | MS.gene055886:CDS | 45.0% | |
| TGAACGGTATCATAGAGCAC+TGG | - | chr8.3:42523998-42524017 | MS.gene055886:CDS | 45.0% | |
| TGTTGTTCCGCAAATCGATC+TGG | - | chr8.3:42523615-42523634 | MS.gene055886:CDS | 45.0% | |
| TTCCGCAACATAATTCGGAG+CGG | - | chr8.3:42523952-42523971 | MS.gene055886:CDS | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | + | chr8.3:42524381-42524400 | None:intergenic | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | - | chr8.3:42524210-42524229 | MS.gene055886:CDS | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | - | chr8.3:42524733-42524752 | MS.gene055886:CDS | 45.0% |
| ! | GAGATTGCAATTCTAGCTGG+TGG | - | chr8.3:42524282-42524301 | MS.gene055886:CDS | 45.0% |
| ! | GGTACCGAACTTCTTGTGTT+TGG | - | chr8.3:42524147-42524166 | MS.gene055886:CDS | 45.0% |
| AAACAACCTCGGAACCAAGC+AGG | + | chr8.3:42523431-42523450 | None:intergenic | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | - | chr8.3:42523816-42523835 | MS.gene055886:CDS | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | - | chr8.3:42524718-42524737 | MS.gene055886:CDS | 50.0% | |
| AGCAGCTTCGATGAACGGTT+GGG | - | chr8.3:42524704-42524723 | MS.gene055886:CDS | 50.0% | |
| AGGCAGAGGCAGAGAACAAT+TGG | - | chr8.3:42523464-42523483 | MS.gene055886:CDS | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | - | chr8.3:42524058-42524077 | MS.gene055886:CDS | 50.0% | |
| CACCGCTCCGAATTATGTTG+CGG | + | chr8.3:42523957-42523976 | None:intergenic | 50.0% | |
| CATTGTGGAGGTCCTTCACT+AGG | + | chr8.3:42524822-42524841 | None:intergenic | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | - | chr8.3:42524151-42524170 | MS.gene055886:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | + | chr8.3:42524058-42524077 | None:intergenic | 50.0% | |
| CGATGTTCGAGGTCCGATTA+TGG | - | chr8.3:42523904-42523923 | MS.gene055886:CDS | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | - | chr8.3:42524719-42524738 | MS.gene055886:CDS | 50.0% | |
| CTAGTGAAGGACCTCCACAA+TGG | - | chr8.3:42524820-42524839 | MS.gene055886:CDS | 50.0% | |
| GAACAGAAGCAGCATCATGC+AGG | - | chr8.3:42523814-42523833 | MS.gene055886:CDS | 50.0% | |
| GAGAGAGCAGCTTCGATGAA+CGG | - | chr8.3:42524699-42524718 | MS.gene055886:CDS | 50.0% | |
| GCTGGTGGTTGTGATTCAGA+TGG | - | chr8.3:42524297-42524316 | MS.gene055886:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | - | chr8.3:42523789-42523808 | MS.gene055886:CDS | 50.0% | |
| TATCGTTGGCGGAGACTGAA+CGG | - | chr8.3:42523982-42524001 | MS.gene055886:CDS | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | - | chr8.3:42524376-42524395 | MS.gene055886:CDS | 50.0% | |
| TTCATCGAAGCTGCTCTCTC+CGG | + | chr8.3:42524699-42524718 | None:intergenic | 50.0% | |
| TTCCAGTTCTTGTCAGGCAG+AGG | - | chr8.3:42523450-42523469 | MS.gene055886:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | - | chr8.3:42524217-42524236 | MS.gene055886:CDS | 50.0% |
| ! | ACTTTTGCCGCGCATGAATC+GGG | - | chr8.3:42523858-42523877 | MS.gene055886:CDS | 50.0% |
| ! | CACTTTTGCCGCGCATGAAT+CGG | - | chr8.3:42523857-42523876 | MS.gene055886:CDS | 50.0% |
| ! | CGCTGATTATGCTGACATGG+AGG | - | chr8.3:42524623-42524642 | MS.gene055886:CDS | 50.0% |
| ! | GGTCTTGCATTTAGGGCATG+TGG | - | chr8.3:42524726-42524745 | MS.gene055886:CDS | 50.0% |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | + | chr8.3:42523808-42523827 | None:intergenic | 50.0% |
| !! | GATGTGCTCTGGGGTATTCA+TGG | - | chr8.3:42524401-42524420 | MS.gene055886:CDS | 50.0% |
| !! | TGCTCTGGGGTATTCATGGA+TGG | - | chr8.3:42524405-42524424 | MS.gene055886:CDS | 50.0% |
| AAACCCTCGCCATGACTCCT+TGG | + | chr8.3:42524777-42524796 | None:intergenic | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | - | chr8.3:42524390-42524409 | MS.gene055886:CDS | 55.0% | |
| ACCCCAGAGCACATCTTCCT+GGG | + | chr8.3:42524396-42524415 | None:intergenic | 55.0% | |
| AGCCCAGGAAGATGTGCTCT+GGG | - | chr8.3:42524391-42524410 | MS.gene055886:CDS | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | + | chr8.3:42524580-42524599 | None:intergenic | 55.0% | |
| ATAGGCCTCCCATTCGAGGA+GGG | + | chr8.3:42524040-42524059 | None:intergenic | 55.0% | |
| ATGAAGATGAACCGCAGCCG+AGG | - | chr8.3:42523545-42523564 | MS.gene055886:CDS | 55.0% | |
| CAAGCTTCTTACCTGCGGTG+AGG | - | chr8.3:42524467-42524486 | MS.gene055886:CDS | 55.0% | |
| CCTGTCTAAGCCGATGTTCG+AGG | - | chr8.3:42523893-42523912 | MS.gene055886:CDS | 55.0% | |
| CTCACCGCAGGTAAGAAGCT+TGG | + | chr8.3:42524469-42524488 | None:intergenic | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+CGG | + | chr8.3:42523559-42523578 | None:intergenic | 55.0% | |
| GAGCAGCTTCGATGAACGGT+TGG | - | chr8.3:42524703-42524722 | MS.gene055886:CDS | 55.0% | |
| GATCATAGGCCTCCCATTCG+AGG | + | chr8.3:42524044-42524063 | None:intergenic | 55.0% | |
| GCAGCTTCGATGAACGGTTG+GGG | - | chr8.3:42524705-42524724 | MS.gene055886:CDS | 55.0% | |
| GTTGGAAGGTCGTTCCTGCT+TGG | - | chr8.3:42523414-42523433 | MS.gene055886:CDS | 55.0% | |
| TACCCCAGAGCACATCTTCC+TGG | + | chr8.3:42524397-42524416 | None:intergenic | 55.0% | |
| TATAGAGCTCGGCCGAGTCA+AGG | + | chr8.3:42524329-42524348 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | + | chr8.3:42524066-42524085 | None:intergenic | 55.0% | |
| TGCCTCTGCCTGACAAGAAC+TGG | + | chr8.3:42523455-42523474 | None:intergenic | 55.0% | |
| TTCCTGTGCCCTCCTCGAAT+GGG | - | chr8.3:42524029-42524048 | MS.gene055886:CDS | 55.0% | |
| TTTCCTGTGCCCTCCTCGAA+TGG | - | chr8.3:42524028-42524047 | MS.gene055886:CDS | 55.0% | |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | - | chr8.3:42524765-42524784 | MS.gene055886:CDS | 55.0% |
| ! | CGCCGCTGATTATGCTGACA+TGG | - | chr8.3:42524620-42524639 | MS.gene055886:CDS | 55.0% |
| !! | CCTCGAACATCGGCTTAGAC+AGG | + | chr8.3:42523896-42523915 | None:intergenic | 55.0% |
| AGATGAACCGCAGCCGAGGA+AGG | - | chr8.3:42523549-42523568 | MS.gene055886:CDS | 60.0% | |
| CATAGGCCTCCCATTCGAGG+AGG | + | chr8.3:42524041-42524060 | None:intergenic | 60.0% | |
| CGCAGCCGAGGAAGGTTAAC+AGG | - | chr8.3:42523557-42523576 | MS.gene055886:CDS | 60.0% | |
| CTACGCCCGGGTGACATGTT+AGG | + | chr8.3:42524528-42524547 | None:intergenic | 60.0% | |
| GAGCTGTCCCGATTCATGCG+CGG | + | chr8.3:42523868-42523887 | None:intergenic | 60.0% | |
| GCCCAGGAAGATGTGCTCTG+GGG | - | chr8.3:42524392-42524411 | MS.gene055886:CDS | 60.0% | |
| GCGGTGAGCTCTATCGTTGG+CGG | - | chr8.3:42523971-42523990 | MS.gene055886:CDS | 60.0% | |
| GGACCAAGGAGTCATGGCGA+GGG | - | chr8.3:42524771-42524790 | MS.gene055886:CDS | 60.0% | |
| GGAGCGGTGAGCTCTATCGT+TGG | - | chr8.3:42523968-42523987 | MS.gene055886:CDS | 60.0% | |
| GTCGTTCCTGCTTGGTTCCG+AGG | - | chr8.3:42523422-42523441 | MS.gene055886:CDS | 60.0% | |
| ! | GCGGAAGCTCTGATTCAGCG+AGG | + | chr8.3:42523938-42523957 | None:intergenic | 60.0% |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | + | chr8.3:42523797-42523816 | None:intergenic | 60.0% |
| CGATCCCCTAGCACTACGCC+CGG | + | chr8.3:42524541-42524560 | None:intergenic | 65.0% | |
| CGGACCAAGGAGTCATGGCG+AGG | - | chr8.3:42524770-42524789 | MS.gene055886:CDS | 65.0% | |
| CGGGCGTAGTGCTAGGGGAT+CGG | - | chr8.3:42524539-42524558 | MS.gene055886:CDS | 65.0% | |
| CTGTGCCCTCCTCGAATGGG+AGG | - | chr8.3:42524032-42524051 | MS.gene055886:CDS | 65.0% | |
| GATCCCCTAGCACTACGCCC+GGG | + | chr8.3:42524540-42524559 | None:intergenic | 65.0% | |
| GTCACCCGGGCGTAGTGCTA+GGG | - | chr8.3:42524533-42524552 | MS.gene055886:CDS | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | + | chr8.3:42524574-42524593 | None:intergenic | 65.0% | |
| TCACCCGGGCGTAGTGCTAG+GGG | - | chr8.3:42524534-42524553 | MS.gene055886:CDS | 65.0% | |
| TGTCACCCGGGCGTAGTGCT+AGG | - | chr8.3:42524532-42524551 | MS.gene055886:CDS | 65.0% | |
| ! | CTCCCATTCGAGGAGGGCAC+AGG | + | chr8.3:42524034-42524053 | None:intergenic | 65.0% |
| GGAGATGCCTGCCACAGCCG+AGG | - | chr8.3:42524560-42524579 | MS.gene055886:CDS | 70.0% | |
| GGTGGTGCCTCGGCTGTGGC+AGG | + | chr8.3:42524570-42524589 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 42523412 | 42524905 | 42523412 | ID=MS.gene055886 |
| chr8.3 | mRNA | 42523412 | 42524905 | 42523412 | ID=MS.gene055886.t1;Parent=MS.gene055886 |
| chr8.3 | exon | 42523412 | 42524905 | 42523412 | ID=MS.gene055886.t1.exon1;Parent=MS.gene055886.t1 |
| chr8.3 | CDS | 42523412 | 42524905 | 42523412 | ID=cds.MS.gene055886.t1;Parent=MS.gene055886.t1 |
| Gene Sequence |
| Protein sequence |
