Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40755.t1 | XP_003591234.1 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 4.80E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40755.t1 | Q9LZ98 | 82.9 | 333 | 51 | 2 | 1 | 332 | 1 | 328 | 4.6e-156 | 552.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40755.t1 | G7IAA4 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 3.5e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052641 | MS.gene40755 | 0.805517 | 1.28E-49 | -1.69E-46 |
| MS.gene055505 | MS.gene40755 | 0.829875 | 4.03E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40755.t1 | MTR_1g084720 | 99.700 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 0.0 | 678 |
| MS.gene40755.t1 | MTR_1g069750 | 55.431 | 267 | 111 | 5 | 6 | 270 | 10 | 270 | 6.37e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40755.t1 | AT5G02270 | 83.483 | 333 | 49 | 3 | 1 | 332 | 1 | 328 | 0.0 | 527 |
| MS.gene40755.t1 | AT5G02270 | 77.437 | 359 | 49 | 4 | 1 | 332 | 1 | 354 | 0.0 | 512 |
| MS.gene40755.t1 | AT5G44110 | 56.589 | 258 | 101 | 4 | 6 | 261 | 5 | 253 | 1.46e-99 | 295 |
| MS.gene40755.t1 | AT1G03905 | 63.793 | 232 | 77 | 4 | 36 | 263 | 28 | 256 | 1.88e-99 | 295 |
| MS.gene40755.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene40755.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene40755.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene40755.t1 | AT5G44110 | 57.075 | 212 | 81 | 3 | 6 | 216 | 5 | 207 | 9.14e-79 | 239 |
| MS.gene40755.t1 | AT5G44110 | 62.667 | 150 | 50 | 2 | 67 | 216 | 1 | 144 | 1.46e-60 | 191 |
| MS.gene40755.t1 | AT5G44110 | 56.725 | 171 | 64 | 3 | 6 | 175 | 5 | 166 | 3.46e-59 | 190 |
Find 93 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGAACACGAACCATTTC+AGG | 0.175968 | 1.2:+59088442 | None:intergenic |
| AATATATGTCATGCCTTAAA+TGG | 0.196234 | 1.2:+59084368 | None:intergenic |
| CCTGAAATGGTTCGTGTTCT+TGG | 0.211482 | 1.2:-59088442 | MS.gene40755:CDS |
| AGTTTCTTTGACTTTCTCTA+TGG | 0.218624 | 1.2:+59083946 | None:intergenic |
| GGGTCTCCTCAAACCATTTA+AGG | 0.220345 | 1.2:-59084381 | MS.gene40755:intron |
| TCTTTGATCTCAACCGTAAT+TGG | 0.227019 | 1.2:+59088731 | None:intergenic |
| CCTTTCCTAGGTTCTTCTTC+TGG | 0.235704 | 1.2:-59084249 | MS.gene40755:intron |
| TCTGGTGATCTTTGTTATCT+TGG | 0.240796 | 1.2:-59088385 | MS.gene40755:CDS |
| TCTGCCGAGAAAATGATATT+TGG | 0.245834 | 1.2:-59085261 | MS.gene40755:CDS |
| ATTAGCTCTGCTCTTCTTGC+AGG | 0.255307 | 1.2:+59085222 | None:intergenic |
| TCAACTTGCTTATCAAATTC+AGG | 0.268450 | 1.2:+59083610 | None:intergenic |
| GATACTACTTTAACTTCTTC+TGG | 0.277616 | 1.2:-59088403 | MS.gene40755:CDS |
| ACTACAATTCTGAAGATATT+AGG | 0.310572 | 1.2:-59088484 | MS.gene40755:CDS |
| AATATACATACAATATTTGT+TGG | 0.342577 | 1.2:+59084098 | None:intergenic |
| AAGAAGAGTGCAAATTTGTA+TGG | 0.373325 | 1.2:-59084402 | MS.gene40755:CDS |
| GAATTTGATAAGCAAGTTGA+TGG | 0.381823 | 1.2:-59083607 | MS.gene40755:CDS |
| TTCAGATTCAAAGCCAATTA+CGG | 0.384221 | 1.2:-59088744 | MS.gene40755:CDS |
| AAGAAGAGCAGAGCTAATTA+AGG | 0.392285 | 1.2:-59085217 | MS.gene40755:intron |
| TGCAGAGAACAGTAGAAGTT+TGG | 0.392482 | 1.2:-59083693 | MS.gene40755:intron |
| ACATATGGTGGAACCTGAAA+TGG | 0.405372 | 1.2:-59088455 | MS.gene40755:CDS |
| TATTAGACATCAATCTTTCA+TGG | 0.406448 | 1.2:-59084454 | MS.gene40755:CDS |
| ATAGAAGACAAAGGAAAGAA+AGG | 0.411481 | 1.2:-59083648 | MS.gene40755:CDS |
| TCAAAACTCGGTTTGAGCTT+AGG | 0.411975 | 1.2:+59083476 | None:intergenic |
| GGAGGATGACCGTCGATTCC+AGG | 0.422123 | 1.2:+59088692 | None:intergenic |
| GAGCTGAAATTCACTTATCC+TGG | 0.427324 | 1.2:-59088710 | MS.gene40755:CDS |
| CACTCTTCTTCTTTGACCAT+CGG | 0.430083 | 1.2:+59084415 | None:intergenic |
| CCTTCTGAAGTTTCTAAGAA+AGG | 0.430504 | 1.2:-59084186 | MS.gene40755:CDS |
| CGGTTACATTCCACCATTGC+CGG | 0.435159 | 1.2:-59083514 | MS.gene40755:CDS |
| CCGGTTCGAGTTACTAATAA+TGG | 0.435246 | 1.2:-59083550 | MS.gene40755:CDS |
| GGTGATCTTTGTTATCTTGG+TGG | 0.436365 | 1.2:-59088382 | MS.gene40755:CDS |
| GCAGAAATGTCCATCTGTAT+TGG | 0.437756 | 1.2:+59085279 | None:intergenic |
| TGCCTTCTCGTTGGATCCAA+TGG | 0.439598 | 1.2:-59088611 | MS.gene40755:CDS |
| TTCTCTCTCAATCTCTTCTC+CGG | 0.439832 | 1.2:-59088641 | MS.gene40755:CDS |
| GAAATGCTCAATTAGCGGTT+TGG | 0.442612 | 1.2:+59088661 | None:intergenic |
| TATGCAACACATATATTTGA+CGG | 0.455846 | 1.2:-59084134 | MS.gene40755:CDS |
| AACTAGCAAACTGTCACTAA+TGG | 0.457560 | 1.2:-59083927 | MS.gene40755:intron |
| ACTAATAATGGCTGGGCCGC+AGG | 0.461635 | 1.2:-59083538 | MS.gene40755:CDS |
| GTTTCTTTGACTTTCTCTAT+GGG | 0.462744 | 1.2:+59083947 | None:intergenic |
| TTCGAGTTACTAATAATGGC+TGG | 0.463711 | 1.2:-59083546 | MS.gene40755:CDS |
| AAAATGATATTTGGTGTGGC+TGG | 0.465667 | 1.2:-59085252 | MS.gene40755:CDS |
| AGGGGATCCTGCACGAGCTC+CGG | 0.470810 | 1.2:-59083569 | MS.gene40755:CDS |
| TATTTGACGGTCTTGAGGAT+TGG | 0.475920 | 1.2:-59084121 | MS.gene40755:CDS |
| AGAGAAATTACCAGCGCCAT+TGG | 0.480559 | 1.2:+59088595 | None:intergenic |
| GTTGATGGAAGCCGTGTAGT+TGG | 0.483883 | 1.2:-59083592 | MS.gene40755:CDS |
| AACGAGAAGGCACCGATCAC+CGG | 0.485960 | 1.2:+59088622 | None:intergenic |
| TCAATCTCTTCTCCGGTGAT+CGG | 0.491607 | 1.2:-59088634 | MS.gene40755:CDS |
| ATGTGTTGCATATATAATAG+TGG | 0.491771 | 1.2:+59084145 | None:intergenic |
| AGAGAGAAATGCTCAATTAG+CGG | 0.499738 | 1.2:+59088656 | None:intergenic |
| GTCATGCCTTAAATGGTTTG+AGG | 0.502728 | 1.2:+59084375 | None:intergenic |
| TCAATTAGCGGTTTGGAACC+CGG | 0.503241 | 1.2:+59088668 | None:intergenic |
| CCATTATTAGTAACTCGAAC+CGG | 0.503384 | 1.2:+59083550 | None:intergenic |
| TATCAGGTTTATGTTGCTCA+TGG | 0.505115 | 1.2:-59083989 | MS.gene40755:intron |
| AGGTTTATGTTGCTCATGGA+AGG | 0.510815 | 1.2:-59083985 | MS.gene40755:CDS |
| TTATGTTGCTCATGGAAGGC+TGG | 0.512155 | 1.2:-59083981 | MS.gene40755:CDS |
| CTCGTTGGATCCAATGGCGC+TGG | 0.512963 | 1.2:-59088605 | MS.gene40755:intron |
| AGCGGTTTGGAACCCGGCGG+AGG | 0.521968 | 1.2:+59088674 | None:intergenic |
| AATCGACGGTCATCCTCCGC+CGG | 0.525327 | 1.2:-59088687 | MS.gene40755:CDS |
| ACTCGAACCGGAGCTCGTGC+AGG | 0.533231 | 1.2:+59083562 | None:intergenic |
| AAGAAAGGAATGTGATGAGA+GGG | 0.539356 | 1.2:-59084171 | MS.gene40755:CDS |
| GATATTAGGAGGGAAACATA+TGG | 0.550354 | 1.2:-59088470 | MS.gene40755:CDS |
| AGGAAAGAAAGGAAGGCTGC+TGG | 0.552158 | 1.2:-59083637 | MS.gene40755:CDS |
| AAATGATATTTGGTGTGGCT+GGG | 0.553247 | 1.2:-59085251 | MS.gene40755:CDS |
| GGTGATCGGTGCCTTCTCGT+TGG | 0.553650 | 1.2:-59088620 | MS.gene40755:CDS |
| ACATATATTTGACGGTCTTG+AGG | 0.557218 | 1.2:-59084126 | MS.gene40755:CDS |
| GATGGAAGCCGTGTAGTTGG+AGG | 0.557443 | 1.2:-59083589 | MS.gene40755:CDS |
| CTTTGAAGTTCCAATACAGA+TGG | 0.561595 | 1.2:-59085289 | MS.gene40755:CDS |
| AAGACAAAGGAAAGAAAGGA+AGG | 0.565520 | 1.2:-59083644 | MS.gene40755:CDS |
| GAACAGTAGAAGTTTGGCTA+CGG | 0.570397 | 1.2:-59083687 | MS.gene40755:CDS |
| ACAATTCTGAAGATATTAGG+AGG | 0.572545 | 1.2:-59088481 | MS.gene40755:CDS |
| ATGGAAGCCGTGTAGTTGGA+GGG | 0.572562 | 1.2:-59083588 | MS.gene40755:CDS |
| ATCGACGGTCATCCTCCGCC+GGG | 0.574996 | 1.2:-59088686 | MS.gene40755:CDS |
| TTCACTTATCCTGGAATCGA+CGG | 0.578787 | 1.2:-59088701 | MS.gene40755:CDS |
| AAACTCGGTTTGAGCTTAGG+AGG | 0.579078 | 1.2:+59083479 | None:intergenic |
| AGAAGAGTGCAAATTTGTAT+GGG | 0.581883 | 1.2:-59084401 | MS.gene40755:CDS |
| TCGAGTTACTAATAATGGCT+GGG | 0.593054 | 1.2:-59083545 | MS.gene40755:CDS |
| TCTTTGTTATCTTGGTGGTG+AGG | 0.593435 | 1.2:-59088377 | MS.gene40755:intron |
| CAGCTCTTGCTAGAACATCA+AGG | 0.597648 | 1.2:+59084210 | None:intergenic |
| CGCCATTGGATCCAACGAGA+AGG | 0.598957 | 1.2:+59088609 | None:intergenic |
| CCTTTCTTAGAAACTTCAGA+AGG | 0.599066 | 1.2:+59084186 | None:intergenic |
| TAAGAAAGGAATGTGATGAG+AGG | 0.615451 | 1.2:-59084172 | MS.gene40755:CDS |
| AGTAGAAGTTTGGCTACGGA+AGG | 0.617342 | 1.2:-59083683 | MS.gene40755:CDS |
| ATAATGGCTGGGCCGCAGGT+CGG | 0.623795 | 1.2:-59083534 | MS.gene40755:CDS |
| CTTGCTTATCAAATTCAGGA+AGG | 0.634035 | 1.2:+59083614 | None:intergenic |
| ATTAGGAGGGAAACATATGG+TGG | 0.662252 | 1.2:-59088467 | MS.gene40755:CDS |
| CAGGATCCCCTCCAACTACA+CGG | 0.662648 | 1.2:+59083581 | None:intergenic |
| CAATTCTGAAGATATTAGGA+GGG | 0.663049 | 1.2:-59088480 | MS.gene40755:CDS |
| TGGAAGCCGTGTAGTTGGAG+GGG | 0.669936 | 1.2:-59083587 | MS.gene40755:CDS |
| GGTGGAATGTAACCGACCTG+CGG | 0.673773 | 1.2:+59083522 | None:intergenic |
| AGATTGCATAAAGTATCCGA+TGG | 0.675760 | 1.2:-59084431 | MS.gene40755:CDS |
| CGAGAAAATGATATTTGGTG+TGG | 0.678669 | 1.2:-59085256 | MS.gene40755:CDS |
| AGAAAGGAATGTGATGAGAG+GGG | 0.702733 | 1.2:-59084170 | MS.gene40755:CDS |
| GAGATGAAGATAGAAGACAA+AGG | 0.719714 | 1.2:-59083657 | MS.gene40755:CDS |
| ATTAGCGGTTTGGAACCCGG+CGG | 0.782107 | 1.2:+59088671 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAAGAAAATCTTT+GGG | - | chr1.2:59087498-59087517 | MS.gene40755:intron | 10.0% |
| !! | TAAAATATAAAGAAAATCTT+TGG | - | chr1.2:59087497-59087516 | MS.gene40755:intron | 10.0% |
| !! | TTTATAATAATAAAGGATAA+AGG | - | chr1.2:59086198-59086217 | MS.gene40755:intron | 10.0% |
| !!! | GTTTGTTTTTTTTTTTTTTT+GGG | - | chr1.2:59086880-59086899 | MS.gene40755:intron | 10.0% |
| !! | AAATATAAAGAAAATCTTTG+GGG | - | chr1.2:59087499-59087518 | MS.gene40755:intron | 15.0% |
| !! | AAGTTATATTATATAACCTA+TGG | - | chr1.2:59088416-59088435 | MS.gene40755:CDS | 15.0% |
| !! | AATATACATACAATATTTGT+TGG | + | chr1.2:59088134-59088153 | None:intergenic | 15.0% |
| !! | AATGTAATTAATAAACTTGA+TGG | + | chr1.2:59084214-59084233 | None:intergenic | 15.0% |
| !! | CAAAAATAAATTAATCCAAA+CGG | + | chr1.2:59086416-59086435 | None:intergenic | 15.0% |
| !! | TTAGCAATAAATATATGTTT+AGG | - | chr1.2:59085798-59085817 | MS.gene40755:intron | 15.0% |
| !!! | GCTATCATTATTTTAAATTA+GGG | + | chr1.2:59083984-59084003 | None:intergenic | 15.0% |
| !!! | GGTTTGTTTTTTTTTTTTTT+TGG | - | chr1.2:59086879-59086898 | MS.gene40755:intron | 15.0% |
| !!! | TATAATATAACTTGTATTCA+AGG | + | chr1.2:59088409-59088428 | None:intergenic | 15.0% |
| !!! | TCTAGCTTTTATAATAATAA+AGG | - | chr1.2:59086191-59086210 | MS.gene40755:intron | 15.0% |
| !!! | TGCTATCATTATTTTAAATT+AGG | + | chr1.2:59083985-59084004 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGGGAT+GGG | - | chr1.2:59086885-59086904 | MS.gene40755:intron | 15.0% |
| !! | ATCTGTATCGTATAATTATA+AGG | + | chr1.2:59084601-59084620 | None:intergenic | 20.0% |
| !! | ATGATAGAAGTAATTATTCA+TGG | + | chr1.2:59087173-59087192 | None:intergenic | 20.0% |
| !! | ATTATTATAAAAGCTAGACT+TGG | + | chr1.2:59086189-59086208 | None:intergenic | 20.0% |
| !! | ATTGCATAAATGTATATCAA+AGG | - | chr1.2:59085367-59085386 | MS.gene40755:intron | 20.0% |
| !! | CAATAAATATATGTTTAGGA+GGG | - | chr1.2:59085802-59085821 | MS.gene40755:intron | 20.0% |
| !! | GATTGATAAAATACTTAGTT+TGG | - | chr1.2:59084833-59084852 | MS.gene40755:intron | 20.0% |
| !! | GTAATAAATGCTAATCAAAT+CGG | + | chr1.2:59085991-59086010 | None:intergenic | 20.0% |
| !! | TACCAAACTAACTTATAATA+CGG | - | chr1.2:59084721-59084740 | MS.gene40755:intron | 20.0% |
| !! | TATATGCTTGAATTTGATAT+TGG | - | chr1.2:59087566-59087585 | MS.gene40755:intron | 20.0% |
| !! | TCTGTATCGTATAATTATAA+GGG | + | chr1.2:59084600-59084619 | None:intergenic | 20.0% |
| !! | TGTAATATCTAAACATGAAA+AGG | + | chr1.2:59087912-59087931 | None:intergenic | 20.0% |
| !!! | AAATTGAAATTTGTAGGTTT+TGG | + | chr1.2:59086761-59086780 | None:intergenic | 20.0% |
| !!! | AACTTGATACAATACTTTTA+AGG | + | chr1.2:59084573-59084592 | None:intergenic | 20.0% |
| !!! | ATTATAAGTTAGTTTGGTAA+GGG | + | chr1.2:59084720-59084739 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTTTTTTTTGGGA+TGG | - | chr1.2:59086884-59086903 | MS.gene40755:intron | 20.0% |
| !!! | TATAATCGATTTACAATTGT+TGG | + | chr1.2:59084794-59084813 | None:intergenic | 20.0% |
| !!! | TATTATAAGTTAGTTTGGTA+AGG | + | chr1.2:59084721-59084740 | None:intergenic | 20.0% |
| !!! | TTTGATTTTTTGTTGTTACT+AGG | - | chr1.2:59083718-59083737 | MS.gene40755:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGGGATG+GGG | - | chr1.2:59086886-59086905 | MS.gene40755:intron | 20.0% |
| ! | AAAATAGAGTTTCAATCAAC+GGG | - | chr1.2:59085765-59085784 | MS.gene40755:intron | 25.0% |
| ! | AAAATAGAGTTTGAATCAAC+GGG | - | chr1.2:59085728-59085747 | MS.gene40755:intron | 25.0% |
| ! | AATAGATTGCTAACATTTCA+AGG | - | chr1.2:59085151-59085170 | MS.gene40755:intron | 25.0% |
| ! | AATATATGTCATGCCTTAAA+TGG | + | chr1.2:59087864-59087883 | None:intergenic | 25.0% |
| ! | AATTAATTATTAGCAAGTGC+AGG | + | chr1.2:59086242-59086261 | None:intergenic | 25.0% |
| ! | ACACATATAATTGATTGAGA+AGG | + | chr1.2:59088340-59088359 | None:intergenic | 25.0% |
| ! | AGATTAGATTAGCAATTAGT+AGG | - | chr1.2:59085953-59085972 | MS.gene40755:intron | 25.0% |
| ! | ATAATGATAGCAAATCGATA+AGG | - | chr1.2:59083993-59084012 | MS.gene40755:intron | 25.0% |
| ! | ATACGTTACGAAATATTTCA+TGG | - | chr1.2:59084055-59084074 | MS.gene40755:intron | 25.0% |
| ! | ATAGTTATATGTGTACATAG+AGG | - | chr1.2:59085313-59085332 | MS.gene40755:CDS | 25.0% |
| ! | ATGTGTTGCATATATAATAG+TGG | + | chr1.2:59088087-59088106 | None:intergenic | 25.0% |
| ! | ATTAATTATTAGCAAGTGCA+GGG | + | chr1.2:59086241-59086260 | None:intergenic | 25.0% |
| ! | CTCTGTTTAGTAAAAAATAG+CGG | + | chr1.2:59086801-59086820 | None:intergenic | 25.0% |
| ! | GAAAATAGAGTTTCAATCAA+CGG | - | chr1.2:59085764-59085783 | MS.gene40755:intron | 25.0% |
| ! | GAAAATAGAGTTTGAATCAA+CGG | - | chr1.2:59085727-59085746 | MS.gene40755:intron | 25.0% |
| ! | GATAGCAAATTGAAATTTGT+AGG | + | chr1.2:59086767-59086786 | None:intergenic | 25.0% |
| ! | GATTAGATTAGCAATTAGTA+GGG | - | chr1.2:59086107-59086126 | MS.gene40755:intron | 25.0% |
| ! | GCAATAAATATATGTTTAGG+AGG | - | chr1.2:59085801-59085820 | MS.gene40755:intron | 25.0% |
| ! | GGATAAAGGATTATACTAAT+TGG | - | chr1.2:59086212-59086231 | MS.gene40755:intron | 25.0% |
| ! | GTGTATTTGATGAAATCTAA+AGG | - | chr1.2:59084670-59084689 | MS.gene40755:intron | 25.0% |
| ! | GTTAGAAATTATCTTGCAAA+TGG | - | chr1.2:59084395-59084414 | MS.gene40755:CDS | 25.0% |
| ! | TACCGTATTATAAGTTAGTT+TGG | + | chr1.2:59084726-59084745 | None:intergenic | 25.0% |
| ! | TATCGTATAATTATAAGGGT+TGG | + | chr1.2:59084596-59084615 | None:intergenic | 25.0% |
| ! | TATGCAACACATATATTTGA+CGG | - | chr1.2:59088095-59088114 | MS.gene40755:intron | 25.0% |
| ! | TATTAGACATCAATCTTTCA+TGG | - | chr1.2:59087775-59087794 | MS.gene40755:intron | 25.0% |
| ! | TATTATATAACCTATGGTTG+TGG | - | chr1.2:59088422-59088441 | MS.gene40755:CDS | 25.0% |
| ! | TCGCTTATATATGATATCTA+CGG | - | chr1.2:59085874-59085893 | MS.gene40755:intron | 25.0% |
| ! | TGCATATATATAGTTGTCTT+TGG | - | chr1.2:59087710-59087729 | MS.gene40755:intron | 25.0% |
| ! | TGTGATTAAGTGTGAAAATA+CGG | - | chr1.2:59086071-59086090 | MS.gene40755:intron | 25.0% |
| ! | TTACAAAACCATCAACATAA+AGG | - | chr1.2:59084857-59084876 | MS.gene40755:intron | 25.0% |
| ! | TTAGTCAAATACTCTTATTG+TGG | + | chr1.2:59087363-59087382 | None:intergenic | 25.0% |
| ! | TTCTATCAAATTGCTAATGT+GGG | - | chr1.2:59086851-59086870 | MS.gene40755:intron | 25.0% |
| ! | TTGAATTAATTGTGCCTAAT+TGG | - | chr1.2:59088504-59088523 | MS.gene40755:intron | 25.0% |
| ! | TTTCTATCAAATTGCTAATG+TGG | - | chr1.2:59086850-59086869 | MS.gene40755:intron | 25.0% |
| !! | ACTACAATTCTGAAGATATT+AGG | - | chr1.2:59083745-59083764 | MS.gene40755:intron | 25.0% |
| !! | AGTACGTAATGATAAAGTTT+TGG | + | chr1.2:59087632-59087651 | None:intergenic | 25.0% |
| !! | ATTTTCAGAGTTTGAATCAA+CGG | - | chr1.2:59086047-59086066 | MS.gene40755:intron | 25.0% |
| !! | GAATTTTATCAAACCTCTAA+TGG | + | chr1.2:59085213-59085232 | None:intergenic | 25.0% |
| !! | TTGAATTTGATATTGGTTGA+TGG | - | chr1.2:59087573-59087592 | MS.gene40755:intron | 25.0% |
| !! | TTTTATCCATTGATAAGTGT+TGG | - | chr1.2:59084420-59084439 | MS.gene40755:CDS | 25.0% |
| !!! | AGAGCAATTTTTTACTTGTA+AGG | - | chr1.2:59087948-59087967 | MS.gene40755:intron | 25.0% |
| !!! | TACACTAATGAATTTTGACT+TGG | + | chr1.2:59084655-59084674 | None:intergenic | 25.0% |
| !!! | TATATGCTTCTCATTTTAGT+TGG | - | chr1.2:59084469-59084488 | MS.gene40755:intron | 25.0% |
| !!! | TTGCTGGATTGTTTTTATTT+TGG | + | chr1.2:59084912-59084931 | None:intergenic | 25.0% |
| AAAGGTCATGATAAATGCTT+GGG | - | chr1.2:59085385-59085404 | MS.gene40755:intron | 30.0% | |
| AACAACTTAAATTGTAGACC+AGG | - | chr1.2:59088449-59088468 | MS.gene40755:CDS | 30.0% | |
| AACAGATACAAAATGCCAAT+AGG | - | chr1.2:59084954-59084973 | MS.gene40755:intron | 30.0% | |
| AAGTTATACGAGAGAAAATG+AGG | - | chr1.2:59085699-59085718 | MS.gene40755:intron | 30.0% | |
| AATTAGTAGGGAAAAATGCT+AGG | - | chr1.2:59086119-59086138 | MS.gene40755:intron | 30.0% | |
| ACAATTACAGATGCATAATG+TGG | + | chr1.2:59084537-59084556 | None:intergenic | 30.0% | |
| ATAAATGCTTGGGTGTTTAA+TGG | - | chr1.2:59085395-59085414 | MS.gene40755:intron | 30.0% | |
| ATAACACAAACGAAATCATG+AGG | - | chr1.2:59084811-59084830 | MS.gene40755:intron | 30.0% | |
| ATACAGATGAAAAGTGAGAT+TGG | - | chr1.2:59084613-59084632 | MS.gene40755:intron | 30.0% | |
| ATAGAAGACAAAGGAAAGAA+AGG | - | chr1.2:59088581-59088600 | MS.gene40755:intron | 30.0% | |
| ATATACAGAAATGAACGCAA+AGG | + | chr1.2:59087439-59087458 | None:intergenic | 30.0% | |
| ATCGCATTAAATGATAGCAA+GGG | - | chr1.2:59085512-59085531 | MS.gene40755:intron | 30.0% | |
| ATCTAATGCCTTTATGTTGA+TGG | + | chr1.2:59084868-59084887 | None:intergenic | 30.0% | |
| ATGGTAAACGACATTTGATA+GGG | - | chr1.2:59084074-59084093 | MS.gene40755:intron | 30.0% | |
| ATTAGTAGGGAAAAATGCTA+GGG | - | chr1.2:59086120-59086139 | MS.gene40755:intron | 30.0% | |
| CAAAATGTTAGACTTCTAAG+TGG | + | chr1.2:59084138-59084157 | None:intergenic | 30.0% | |
| CAGCTTATAACAATGAAAAC+TGG | - | chr1.2:59084761-59084780 | MS.gene40755:intron | 30.0% | |
| CTGCATATTCAAAACCAATT+AGG | + | chr1.2:59088521-59088540 | None:intergenic | 30.0% | |
| CTGTCAAACAAAATTGAGAT+TGG | + | chr1.2:59085012-59085031 | None:intergenic | 30.0% | |
| GGGATGATGTTAAAAAGAAA+AGG | + | chr1.2:59084700-59084719 | None:intergenic | 30.0% | |
| GTATATTCATAAGCTTGTCA+AGG | - | chr1.2:59086477-59086496 | MS.gene40755:intron | 30.0% | |
| GTGGAGCATATATAAACAAA+TGG | + | chr1.2:59084518-59084537 | None:intergenic | 30.0% | |
| GTGTGAAAATAGAGTTTGAA+CGG | - | chr1.2:59085927-59085946 | MS.gene40755:intron | 30.0% | |
| TAACCATACCAAAATAGCAA+TGG | + | chr1.2:59087415-59087434 | None:intergenic | 30.0% | |
| TAATGTTCACTTACAATGCA+TGG | - | chr1.2:59087659-59087678 | MS.gene40755:intron | 30.0% | |
| TAGATTAGCAATTAGTGCAA+GGG | - | chr1.2:59085957-59085976 | MS.gene40755:intron | 30.0% | |
| TGTATGTAAACTGCAAACAA+AGG | - | chr1.2:59085241-59085260 | MS.gene40755:CDS | 30.0% | |
| TGTGAAAATAGAGTTTGAAC+GGG | - | chr1.2:59085928-59085947 | MS.gene40755:intron | 30.0% | |
| TTAGATTAGCAATTAGTGCA+AGG | - | chr1.2:59085956-59085975 | MS.gene40755:intron | 30.0% | |
| TTCAGAACTGAAATTACAGA+AGG | + | chr1.2:59088165-59088184 | None:intergenic | 30.0% | |
| TTCAGATTCAAAGCCAATTA+CGG | - | chr1.2:59083485-59083504 | MS.gene40755:CDS | 30.0% | |
| TTCGTTTATATTTCATCGCA+CGG | + | chr1.2:59083928-59083947 | None:intergenic | 30.0% | |
| TTTAGGAGGGAAAAATACTA+GGG | - | chr1.2:59085815-59085834 | MS.gene40755:intron | 30.0% | |
| ! | AAGAAGAGTGCAAATTTGTA+TGG | - | chr1.2:59087827-59087846 | MS.gene40755:intron | 30.0% |
| ! | AAGGAGGTCTAAAATTGTAT+CGG | + | chr1.2:59086296-59086315 | None:intergenic | 30.0% |
| ! | ACAATTCTGAAGATATTAGG+AGG | - | chr1.2:59083748-59083767 | MS.gene40755:intron | 30.0% |
| ! | AGAAGAGTGCAAATTTGTAT+GGG | - | chr1.2:59087828-59087847 | MS.gene40755:intron | 30.0% |
| ! | AGTTTCTTTGACTTTCTCTA+TGG | + | chr1.2:59088286-59088305 | None:intergenic | 30.0% |
| ! | CAATTCTGAAGATATTAGGA+GGG | - | chr1.2:59083749-59083768 | MS.gene40755:intron | 30.0% |
| ! | CACACCAAATATCATTTTCT+CGG | + | chr1.2:59086975-59086994 | None:intergenic | 30.0% |
| ! | CATTTCAATGCTCTTTTATC+AGG | - | chr1.2:59088224-59088243 | MS.gene40755:intron | 30.0% |
| ! | GAATTTGATAAGCAAGTTGA+TGG | - | chr1.2:59088622-59088641 | MS.gene40755:CDS | 30.0% |
| ! | GATACTACTTTAACTTCTTC+TGG | - | chr1.2:59083826-59083845 | MS.gene40755:intron | 30.0% |
| ! | GTTTCTTTGACTTTCTCTAT+GGG | + | chr1.2:59088285-59088304 | None:intergenic | 30.0% |
| ! | TATAAAGAAAATCTTTGGGG+TGG | - | chr1.2:59087502-59087521 | MS.gene40755:intron | 30.0% |
| ! | TCAACTTGCTTATCAAATTC+AGG | + | chr1.2:59088622-59088641 | None:intergenic | 30.0% |
| ! | TTATAAAAGCTAGACTTGGT+TGG | + | chr1.2:59086185-59086204 | None:intergenic | 30.0% |
| ! | TTTTCAGAGTTTGAATCAAC+GGG | - | chr1.2:59086048-59086067 | MS.gene40755:intron | 30.0% |
| !! | AGAATGAGAGTCATTGATTT+AGG | - | chr1.2:59086326-59086345 | MS.gene40755:intron | 30.0% |
| !! | GTAGGTTTTGGTAAAATTAG+CGG | + | chr1.2:59086749-59086768 | None:intergenic | 30.0% |
| !! | GTGTGTTATTCGTTTTCAAT+TGG | - | chr1.2:59085668-59085687 | MS.gene40755:intron | 30.0% |
| !! | TCATTGATTTAGGCTATGTT+TGG | - | chr1.2:59086336-59086355 | MS.gene40755:intron | 30.0% |
| !! | TTGTGCAATTTTAGTCCTAT+TGG | + | chr1.2:59084972-59084991 | None:intergenic | 30.0% |
| !!! | TTTCCATTGCTATTTTGGTA+TGG | - | chr1.2:59087409-59087428 | MS.gene40755:intron | 30.0% |
| AAATTGCTAATGTGGGTGAT+TGG | - | chr1.2:59086858-59086877 | MS.gene40755:intron | 35.0% | |
| AAATTGTAAATTGCACAGCC+TGG | + | chr1.2:59088470-59088489 | None:intergenic | 35.0% | |
| AAATTTCTTCATGTCAGACG+AGG | - | chr1.2:59087094-59087113 | MS.gene40755:intron | 35.0% | |
| AACTAGCAAACTGTCACTAA+TGG | - | chr1.2:59088302-59088321 | MS.gene40755:intron | 35.0% | |
| AAGAAAGGAATGTGATGAGA+GGG | - | chr1.2:59088058-59088077 | MS.gene40755:intron | 35.0% | |
| AAGAAGAGCAGAGCTAATTA+AGG | - | chr1.2:59087012-59087031 | MS.gene40755:intron | 35.0% | |
| AAGACAAAGGAAAGAAAGGA+AGG | - | chr1.2:59088585-59088604 | MS.gene40755:intron | 35.0% | |
| AATTAACAGTTTACTCGTCG+TGG | - | chr1.2:59087307-59087326 | MS.gene40755:intron | 35.0% | |
| ACATATATTTGACGGTCTTG+AGG | - | chr1.2:59088103-59088122 | MS.gene40755:intron | 35.0% | |
| ACATGATGTTGAAACCATGT+TGG | + | chr1.2:59085186-59085205 | None:intergenic | 35.0% | |
| ACCAAAATAGCAATGGAAAG+AGG | + | chr1.2:59087408-59087427 | None:intergenic | 35.0% | |
| ACCAACTATAAGCACGAAAA+TGG | + | chr1.2:59086367-59086386 | None:intergenic | 35.0% | |
| ACTAGGGATTAGGGTAAATT+AGG | - | chr1.2:59085831-59085850 | MS.gene40755:intron | 35.0% | |
| AGAGAGAAATGCTCAATTAG+CGG | + | chr1.2:59083576-59083595 | None:intergenic | 35.0% | |
| AGATGAAAAGTGAGATTGGT+TGG | - | chr1.2:59084617-59084636 | MS.gene40755:intron | 35.0% | |
| AGATTAGCAATTAGTGCAAG+GGG | - | chr1.2:59085958-59085977 | MS.gene40755:intron | 35.0% | |
| AGGGAAAAATACTAGGGATT+AGG | - | chr1.2:59085821-59085840 | MS.gene40755:intron | 35.0% | |
| AGGGTAAATTAGGGTGAATT+AGG | - | chr1.2:59085841-59085860 | MS.gene40755:intron | 35.0% | |
| ATGTAAACTGCAAACAAAGG+AGG | - | chr1.2:59085244-59085263 | MS.gene40755:CDS | 35.0% | |
| CAAAGGTCATGATAAATGCT+TGG | - | chr1.2:59085384-59085403 | MS.gene40755:intron | 35.0% | |
| CACCTTAGGCAATAAGAATT+TGG | - | chr1.2:59084271-59084290 | MS.gene40755:intron | 35.0% | |
| CAGACAATGTTGATCGTAAT+TGG | - | chr1.2:59085046-59085065 | MS.gene40755:intron | 35.0% | |
| CATGGTAAACGACATTTGAT+AGG | - | chr1.2:59084073-59084092 | MS.gene40755:intron | 35.0% | |
| CATTAAATGATAGCAAGGGA+GGG | - | chr1.2:59085516-59085535 | MS.gene40755:intron | 35.0% | |
| CCATTATTAGTAACTCGAAC+CGG | + | chr1.2:59088682-59088701 | None:intergenic | 35.0% | |
| CCTTTCTTAGAAACTTCAGA+AGG | + | chr1.2:59088046-59088065 | None:intergenic | 35.0% | |
| CTAGGGATTAGGGTAAATTA+GGG | - | chr1.2:59085832-59085851 | MS.gene40755:intron | 35.0% | |
| CTGATGTGTTGTCTTCTTTA+TGG | - | chr1.2:59087886-59087905 | MS.gene40755:intron | 35.0% | |
| CTTGCTTATCAAATTCAGGA+AGG | + | chr1.2:59088618-59088637 | None:intergenic | 35.0% | |
| GACCAAATTCTTATTGCCTA+AGG | + | chr1.2:59084276-59084295 | None:intergenic | 35.0% | |
| GAGATGAAGATAGAAGACAA+AGG | - | chr1.2:59088572-59088591 | MS.gene40755:intron | 35.0% | |
| GATATTAGGAGGGAAACATA+TGG | - | chr1.2:59083759-59083778 | MS.gene40755:intron | 35.0% | |
| GATCGCATTAAATGATAGCA+AGG | - | chr1.2:59085511-59085530 | MS.gene40755:intron | 35.0% | |
| GCAACTTTATTCAATGTTGC+TGG | + | chr1.2:59084928-59084947 | None:intergenic | 35.0% | |
| GGGAAAAATACTAGGGATTA+GGG | - | chr1.2:59085822-59085841 | MS.gene40755:intron | 35.0% | |
| GGGTAAATTAGGGTGAATTA+GGG | - | chr1.2:59085842-59085861 | MS.gene40755:intron | 35.0% | |
| GTACATAGAGGATGATGATT+GGG | - | chr1.2:59085325-59085344 | MS.gene40755:intron | 35.0% | |
| GTGTGAAAATACGGTTTGAA+CGG | - | chr1.2:59086080-59086099 | MS.gene40755:intron | 35.0% | |
| GTTCTTCCAACACTTATCAA+TGG | + | chr1.2:59084429-59084448 | None:intergenic | 35.0% | |
| GTTTAGGAGGGAAAAATACT+AGG | - | chr1.2:59085814-59085833 | MS.gene40755:intron | 35.0% | |
| TAAGAAAGGAATGTGATGAG+AGG | - | chr1.2:59088057-59088076 | MS.gene40755:intron | 35.0% | |
| TATCAGGTTTATGTTGCTCA+TGG | - | chr1.2:59088240-59088259 | MS.gene40755:intron | 35.0% | |
| TCGAGTTACTAATAATGGCT+GGG | - | chr1.2:59088684-59088703 | MS.gene40755:CDS | 35.0% | |
| TCGTTTATATTTCATCGCAC+GGG | + | chr1.2:59083927-59083946 | None:intergenic | 35.0% | |
| TCTCATTCTATGTCAGAGAA+AGG | + | chr1.2:59086315-59086334 | None:intergenic | 35.0% | |
| TCTGCCGAGAAAATGATATT+TGG | - | chr1.2:59086968-59086987 | MS.gene40755:intron | 35.0% | |
| TCTTTGATCTCAACCGTAAT+TGG | + | chr1.2:59083501-59083520 | None:intergenic | 35.0% | |
| TGTAAACTGCAAACAAAGGA+GGG | - | chr1.2:59085245-59085264 | MS.gene40755:CDS | 35.0% | |
| TGTACATAGAGGATGATGAT+TGG | - | chr1.2:59085324-59085343 | MS.gene40755:intron | 35.0% | |
| TGTGAAAATACGGTTTGAAC+GGG | - | chr1.2:59086081-59086100 | MS.gene40755:intron | 35.0% | |
| TTGACAGCGTCACAATTAAT+AGG | + | chr1.2:59084189-59084208 | None:intergenic | 35.0% | |
| TTGATCGTAATTGGATCCAA+TGG | - | chr1.2:59085055-59085074 | MS.gene40755:intron | 35.0% | |
| TTGGGTGTTTAATGGTTAGT+TGG | - | chr1.2:59085403-59085422 | MS.gene40755:intron | 35.0% | |
| ! | AGATTGCATAAAGTATCCGA+TGG | - | chr1.2:59087798-59087817 | MS.gene40755:intron | 35.0% |
| ! | CGAGAAAATGATATTTGGTG+TGG | - | chr1.2:59086973-59086992 | MS.gene40755:intron | 35.0% |
| ! | TCTGGTGATCTTTGTTATCT+TGG | - | chr1.2:59083844-59083863 | MS.gene40755:intron | 35.0% |
| ! | TGGGTGTTTAATGGTTAGTT+GGG | - | chr1.2:59085404-59085423 | MS.gene40755:intron | 35.0% |
| ! | TTCGAGTTACTAATAATGGC+TGG | - | chr1.2:59088683-59088702 | MS.gene40755:CDS | 35.0% |
| !! | AAAATGATATTTGGTGTGGC+TGG | - | chr1.2:59086977-59086996 | MS.gene40755:intron | 35.0% |
| !! | AAATGATATTTGGTGTGGCT+GGG | - | chr1.2:59086978-59086997 | MS.gene40755:intron | 35.0% |
| !! | AAGAGCATTGAAATGACAGA+AGG | + | chr1.2:59088219-59088238 | None:intergenic | 35.0% |
| !! | CCTTCTGAAGTTTCTAAGAA+AGG | - | chr1.2:59088043-59088062 | MS.gene40755:intron | 35.0% |
| !! | CTTTGAAGTTCCAATACAGA+TGG | - | chr1.2:59086940-59086959 | MS.gene40755:intron | 35.0% |
| !! | TCATGTTTTTACAGCTCCAT+TGG | + | chr1.2:59085074-59085093 | None:intergenic | 35.0% |
| !!! | TCCTCTTTCCATTGCTATTT+TGG | - | chr1.2:59087404-59087423 | MS.gene40755:intron | 35.0% |
| AAAATTGCTTCAAGCTCGTG+AGG | + | chr1.2:59086642-59086661 | None:intergenic | 40.0% | |
| ACATCATGTTCAGCCATTAG+AGG | - | chr1.2:59085197-59085216 | MS.gene40755:intron | 40.0% | |
| ACGCACGTGTATATATAGAG+TGG | - | chr1.2:59085273-59085292 | MS.gene40755:CDS | 40.0% | |
| AGAAAGGAATGTGATGAGAG+GGG | - | chr1.2:59088059-59088078 | MS.gene40755:intron | 40.0% | |
| AGGGAAAAATGCTAGGGATT+AGG | - | chr1.2:59086126-59086145 | MS.gene40755:intron | 40.0% | |
| AGGTTTATGTTGCTCATGGA+AGG | - | chr1.2:59088244-59088263 | MS.gene40755:intron | 40.0% | |
| ATATGAGCTGTACATGCATG+TGG | - | chr1.2:59087455-59087474 | MS.gene40755:intron | 40.0% | |
| ATTAGGAGGGAAACATATGG+TGG | - | chr1.2:59083762-59083781 | MS.gene40755:intron | 40.0% | |
| CACTCTTCTTCTTTGACCAT+CGG | + | chr1.2:59087817-59087836 | None:intergenic | 40.0% | |
| CATTCTATGTCAGAGAAAGG+AGG | + | chr1.2:59086312-59086331 | None:intergenic | 40.0% | |
| GAAATGCTCAATTAGCGGTT+TGG | + | chr1.2:59083571-59083590 | None:intergenic | 40.0% | |
| GAACAGTAGAAGTTTGGCTA+CGG | - | chr1.2:59088542-59088561 | MS.gene40755:intron | 40.0% | |
| GAGCTGAAATTCACTTATCC+TGG | - | chr1.2:59083519-59083538 | MS.gene40755:CDS | 40.0% | |
| GATCAACATTGTCTGTGTGA+AGG | + | chr1.2:59085041-59085060 | None:intergenic | 40.0% | |
| GCAGAAATGTCCATCTGTAT+TGG | + | chr1.2:59086953-59086972 | None:intergenic | 40.0% | |
| GCATTAAATGATAGCAAGGG+AGG | - | chr1.2:59085515-59085534 | MS.gene40755:intron | 40.0% | |
| GCTTATTCTGCGTGTTCATT+CGG | + | chr1.2:59085121-59085140 | None:intergenic | 40.0% | |
| GGGAAAAATGCTAGGGATTA+GGG | - | chr1.2:59086127-59086146 | MS.gene40755:intron | 40.0% | |
| GTAAACGTAAGAGTCACCTT+AGG | - | chr1.2:59084257-59084276 | MS.gene40755:intron | 40.0% | |
| GTCATGCCTTAAATGGTTTG+AGG | + | chr1.2:59087857-59087876 | None:intergenic | 40.0% | |
| GTTGTTTACTCCACAACCAT+AGG | + | chr1.2:59088435-59088454 | None:intergenic | 40.0% | |
| TATTTGACGGTCTTGAGGAT+TGG | - | chr1.2:59088108-59088127 | MS.gene40755:intron | 40.0% | |
| TCTAAGTGGTGCATCTGATA+TGG | + | chr1.2:59084124-59084143 | None:intergenic | 40.0% | |
| TGCAGAGAACAGTAGAAGTT+TGG | - | chr1.2:59088536-59088555 | MS.gene40755:intron | 40.0% | |
| TGGAAAGAGGAAGATAGCTT+AGG | + | chr1.2:59087395-59087414 | None:intergenic | 40.0% | |
| TTCACTTACAATGCATGGCT+AGG | - | chr1.2:59087664-59087683 | MS.gene40755:intron | 40.0% | |
| TTCACTTATCCTGGAATCGA+CGG | - | chr1.2:59083528-59083547 | MS.gene40755:CDS | 40.0% | |
| TTCTCTCTCAATCTCTTCTC+CGG | - | chr1.2:59083588-59083607 | MS.gene40755:CDS | 40.0% | |
| ! | ACATATGGTGGAACCTGAAA+TGG | - | chr1.2:59083774-59083793 | MS.gene40755:intron | 40.0% |
| ! | AGGGAAAACTTGGAGTGTTT+AGG | - | chr1.2:59085535-59085554 | MS.gene40755:intron | 40.0% |
| ! | CCGGTTCGAGTTACTAATAA+TGG | - | chr1.2:59088679-59088698 | MS.gene40755:CDS | 40.0% |
| ! | GGGAAAACTTGGAGTGTTTA+GGG | - | chr1.2:59085536-59085555 | MS.gene40755:intron | 40.0% |
| ! | GGTGATCTTTGTTATCTTGG+TGG | - | chr1.2:59083847-59083866 | MS.gene40755:intron | 40.0% |
| ! | TAAGCTCAAACCGAGTTTTG+AGG | - | chr1.2:59088755-59088774 | MS.gene40755:CDS | 40.0% |
| ! | TAGGAGGAAGTTTTCTTCAC+CGG | + | chr1.2:59088737-59088756 | None:intergenic | 40.0% |
| ! | TCAAAACTCGGTTTGAGCTT+AGG | + | chr1.2:59088756-59088775 | None:intergenic | 40.0% |
| ! | TTCATCGCACGGGTTAAATA+GGG | + | chr1.2:59083917-59083936 | None:intergenic | 40.0% |
| ! | TTTCATCGCACGGGTTAAAT+AGG | + | chr1.2:59083918-59083937 | None:intergenic | 40.0% |
| !! | AAGCTCAAACCGAGTTTTGA+GGG | - | chr1.2:59088756-59088775 | MS.gene40755:CDS | 40.0% |
| !! | AGGGCATAAGTGCATTGATT+AGG | + | chr1.2:59083898-59083917 | None:intergenic | 40.0% |
| !! | GCCATTTTCGTGCTTATAGT+TGG | - | chr1.2:59086363-59086382 | MS.gene40755:intron | 40.0% |
| !! | GGGCATAAGTGCATTGATTA+GGG | + | chr1.2:59083897-59083916 | None:intergenic | 40.0% |
| !! | TCTTTGTTATCTTGGTGGTG+AGG | - | chr1.2:59083852-59083871 | MS.gene40755:intron | 40.0% |
| !!! | AGAAGAGATGTTGCTTTTGC+TGG | - | chr1.2:59086917-59086936 | MS.gene40755:intron | 40.0% |
| ACGAGGTTACTGGTGATTGT+AGG | - | chr1.2:59087111-59087130 | MS.gene40755:intron | 45.0% | |
| AGAGAAATTACCAGCGCCAT+TGG | + | chr1.2:59083637-59083656 | None:intergenic | 45.0% | |
| AGGGCAAAGTAGGGTGAATT+AGG | - | chr1.2:59086146-59086165 | MS.gene40755:intron | 45.0% | |
| AGGGTGAATTAGGGCAAACA+TGG | - | chr1.2:59085851-59085870 | MS.gene40755:intron | 45.0% | |
| AGGTTGCTCATTCCTTTCCT+AGG | - | chr1.2:59087968-59087987 | MS.gene40755:intron | 45.0% | |
| AGTAGAAGTTTGGCTACGGA+AGG | - | chr1.2:59088546-59088565 | MS.gene40755:intron | 45.0% | |
| ATAGCAAGGGAGGGAAAACT+TGG | - | chr1.2:59085525-59085544 | MS.gene40755:intron | 45.0% | |
| CAAGGAATGCAACACCAACA+TGG | - | chr1.2:59085169-59085188 | MS.gene40755:intron | 45.0% | |
| CAGCTCTTGCTAGAACATCA+AGG | + | chr1.2:59088022-59088041 | None:intergenic | 45.0% | |
| CCAAGAACACGAACCATTTC+AGG | + | chr1.2:59083790-59083809 | None:intergenic | 45.0% | |
| CCAGAAGAAGAACCTAGGAA+AGG | + | chr1.2:59087983-59088002 | None:intergenic | 45.0% | |
| CCTGAAATGGTTCGTGTTCT+TGG | - | chr1.2:59083787-59083806 | MS.gene40755:intron | 45.0% | |
| CCTTTCCTAGGTTCTTCTTC+TGG | - | chr1.2:59087980-59087999 | MS.gene40755:intron | 45.0% | |
| CTAGGGATTAGGGCAAAGTA+GGG | - | chr1.2:59086137-59086156 | MS.gene40755:intron | 45.0% | |
| CTCATCCAGAAGAAGAACCT+AGG | + | chr1.2:59087988-59088007 | None:intergenic | 45.0% | |
| GGGCAAAGTAGGGTGAATTA+GGG | - | chr1.2:59086147-59086166 | MS.gene40755:intron | 45.0% | |
| GGGTCTCCTCAAACCATTTA+AGG | - | chr1.2:59087848-59087867 | MS.gene40755:intron | 45.0% | |
| TCAATCTCTTCTCCGGTGAT+CGG | - | chr1.2:59083595-59083614 | MS.gene40755:CDS | 45.0% | |
| TGATATGATCGTCAGCCGTT+TGG | - | chr1.2:59086398-59086417 | MS.gene40755:intron | 45.0% | |
| TTATGTTGCTCATGGAAGGC+TGG | - | chr1.2:59088248-59088267 | MS.gene40755:intron | 45.0% | |
| TTCATGTCAGACGAGGTTAC+TGG | - | chr1.2:59087101-59087120 | MS.gene40755:intron | 45.0% | |
| ! | AAACTCGGTTTGAGCTTAGG+AGG | + | chr1.2:59088753-59088772 | None:intergenic | 45.0% |
| ! | AAATGCTAGCTTGACCCGTA+GGG | - | chr1.2:59085561-59085580 | MS.gene40755:intron | 45.0% |
| ! | AGATCTGGGCTTGTTTGGAT+TGG | + | chr1.2:59086615-59086634 | None:intergenic | 45.0% |
| ! | GAAACAGATCTGGGCTTGTT+TGG | + | chr1.2:59086620-59086639 | None:intergenic | 45.0% |
| ! | GAAGTTTTCTTCACCGGCAA+TGG | + | chr1.2:59088731-59088750 | None:intergenic | 45.0% |
| ! | TAAATGCTAGCTTGACCCGT+AGG | - | chr1.2:59085560-59085579 | MS.gene40755:intron | 45.0% |
| ! | TCAATTAGCGGTTTGGAACC+CGG | + | chr1.2:59083564-59083583 | None:intergenic | 45.0% |
| !! | AGGTTCTGAAAAGGGTACAC+AGG | - | chr1.2:59087684-59087703 | MS.gene40755:intron | 45.0% |
| !! | ATTAGCTCTGCTCTTCTTGC+AGG | + | chr1.2:59087010-59087029 | None:intergenic | 45.0% |
| !! | GCATGGCTAGGTTCTGAAAA+GGG | - | chr1.2:59087676-59087695 | MS.gene40755:intron | 45.0% |
| !! | TGCATGGCTAGGTTCTGAAA+AGG | - | chr1.2:59087675-59087694 | MS.gene40755:intron | 45.0% |
| !! | TGTTATCTTGGTGGTGAGGT+TGG | - | chr1.2:59083856-59083875 | MS.gene40755:intron | 45.0% |
| !!! | AGCTCAAACCGAGTTTTGAG+GGG | - | chr1.2:59088757-59088776 | MS.gene40755:CDS | 45.0% |
| !!! | TTTTTTAATTAAGATAATAA+GGG | + | chr1.2:59086701-59086720 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTAAGATAATA+AGG | + | chr1.2:59086702-59086721 | None:intergenic | 5.0% |
| AGCTCGTGAGGAAACAGATC+TGG | + | chr1.2:59086630-59086649 | None:intergenic | 50.0% | |
| AGGAAAGAAAGGAAGGCTGC+TGG | - | chr1.2:59088592-59088611 | MS.gene40755:intron | 50.0% | |
| ATCCCATAACAACCCCCTAC+GGG | + | chr1.2:59085578-59085597 | None:intergenic | 50.0% | |
| ATGGAAGCCGTGTAGTTGGA+GGG | - | chr1.2:59088641-59088660 | MS.gene40755:CDS | 50.0% | |
| CGGTTACATTCCACCATTGC+CGG | - | chr1.2:59088715-59088734 | MS.gene40755:CDS | 50.0% | |
| GATCCCATAACAACCCCCTA+CGG | + | chr1.2:59085579-59085598 | None:intergenic | 50.0% | |
| GCTAGGGATTAGGGCAAAGT+AGG | - | chr1.2:59086136-59086155 | MS.gene40755:intron | 50.0% | |
| GCTCGTGAGGAAACAGATCT+GGG | + | chr1.2:59086629-59086648 | None:intergenic | 50.0% | |
| GGGGGTTGTTATGGGATCTA+CGG | - | chr1.2:59085581-59085600 | MS.gene40755:intron | 50.0% | |
| GTATTCAAGGTTACCCGTCG+AGG | + | chr1.2:59088396-59088415 | None:intergenic | 50.0% | |
| TAATTATGCGCGCTCCTCGA+CGG | - | chr1.2:59088379-59088398 | MS.gene40755:CDS | 50.0% | |
| TGCCTTCTCGTTGGATCCAA+TGG | - | chr1.2:59083618-59083637 | MS.gene40755:CDS | 50.0% | |
| ! | AATGCTAGCTTGACCCGTAG+GGG | - | chr1.2:59085562-59085581 | MS.gene40755:intron | 50.0% |
| ! | GTTGATGGAAGCCGTGTAGT+TGG | - | chr1.2:59088637-59088656 | MS.gene40755:CDS | 50.0% |
| ! | GTTTTCTTCACCGGCAATGG+TGG | + | chr1.2:59088728-59088747 | None:intergenic | 50.0% |
| !!! | ACCGAGTTTTGAGGGGGTAA+TGG | - | chr1.2:59088764-59088783 | MS.gene40755:CDS | 50.0% |
| !!! | GCTCAAACCGAGTTTTGAGG+GGG | - | chr1.2:59088758-59088777 | MS.gene40755:CDS | 50.0% |
| !!! | TTTTTTGGGATGGGGCACAG+TGG | - | chr1.2:59086894-59086913 | MS.gene40755:intron | 50.0% |
| AATTATGCGCGCTCCTCGAC+GGG | - | chr1.2:59088380-59088399 | MS.gene40755:CDS | 55.0% | |
| ACTAATAATGGCTGGGCCGC+AGG | - | chr1.2:59088691-59088710 | MS.gene40755:CDS | 55.0% | |
| ATCTACGGCTGAGACGTAGG+GGG | - | chr1.2:59085596-59085615 | MS.gene40755:intron | 55.0% | |
| CAGGATCCCCTCCAACTACA+CGG | + | chr1.2:59088651-59088670 | None:intergenic | 55.0% | |
| CGCCATTGGATCCAACGAGA+AGG | + | chr1.2:59083623-59083642 | None:intergenic | 55.0% | |
| GACCCGTAGGGGGTTGTTAT+GGG | - | chr1.2:59085573-59085592 | MS.gene40755:intron | 55.0% | |
| GATCTACGGCTGAGACGTAG+GGG | - | chr1.2:59085595-59085614 | MS.gene40755:intron | 55.0% | |
| GATGGAAGCCGTGTAGTTGG+AGG | - | chr1.2:59088640-59088659 | MS.gene40755:CDS | 55.0% | |
| GGATCTACGGCTGAGACGTA+GGG | - | chr1.2:59085594-59085613 | MS.gene40755:intron | 55.0% | |
| GGTGGAATGTAACCGACCTG+CGG | + | chr1.2:59088710-59088729 | None:intergenic | 55.0% | |
| TGACCCGTAGGGGGTTGTTA+TGG | - | chr1.2:59085572-59085591 | MS.gene40755:intron | 55.0% | |
| TGGAAGCCGTGTAGTTGGAG+GGG | - | chr1.2:59088642-59088661 | MS.gene40755:CDS | 55.0% | |
| ! | ATGCTAGCTTGACCCGTAGG+GGG | - | chr1.2:59085563-59085582 | MS.gene40755:intron | 55.0% |
| ! | ATTAGCGGTTTGGAACCCGG+CGG | + | chr1.2:59083561-59083580 | None:intergenic | 55.0% |
| !! | AACGAGAAGGCACCGATCAC+CGG | + | chr1.2:59083610-59083629 | None:intergenic | 55.0% |
| AATCGACGGTCATCCTCCGC+CGG | - | chr1.2:59083542-59083561 | MS.gene40755:CDS | 60.0% | |
| ATAATGGCTGGGCCGCAGGT+CGG | - | chr1.2:59088695-59088714 | MS.gene40755:CDS | 60.0% | |
| CTCGTTGGATCCAATGGCGC+TGG | - | chr1.2:59083624-59083643 | MS.gene40755:CDS | 60.0% | |
| GGGATCTACGGCTGAGACGT+AGG | - | chr1.2:59085593-59085612 | MS.gene40755:intron | 60.0% | |
| ! | GGTGATCGGTGCCTTCTCGT+TGG | - | chr1.2:59083609-59083628 | MS.gene40755:CDS | 60.0% |
| !! | GGAGGATGACCGTCGATTCC+AGG | + | chr1.2:59083540-59083559 | None:intergenic | 60.0% |
| ACTCGAACCGGAGCTCGTGC+AGG | + | chr1.2:59088670-59088689 | None:intergenic | 65.0% | |
| AGGGGATCCTGCACGAGCTC+CGG | - | chr1.2:59088660-59088679 | MS.gene40755:CDS | 65.0% | |
| ATCGACGGTCATCCTCCGCC+GGG | - | chr1.2:59083543-59083562 | MS.gene40755:CDS | 65.0% | |
| ! | AGCGGTTTGGAACCCGGCGG+AGG | + | chr1.2:59083558-59083577 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59083468 | 59088783 | 59083468 | ID=MS.gene40755 |
| chr1.2 | mRNA | 59083468 | 59088783 | 59083468 | ID=MS.gene40755.t1;Parent=MS.gene40755 |
| chr1.2 | exon | 59088606 | 59088783 | 59088606 | ID=MS.gene40755.t1.exon1;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59088606 | 59088783 | 59088606 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59088378 | 59088511 | 59088378 | ID=MS.gene40755.t1.exon2;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59088378 | 59088511 | 59088378 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59085218 | 59085337 | 59085218 | ID=MS.gene40755.t1.exon3;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59085218 | 59085337 | 59085218 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59084382 | 59084477 | 59084382 | ID=MS.gene40755.t1.exon4;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59084382 | 59084477 | 59084382 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59084109 | 59084261 | 59084109 | ID=MS.gene40755.t1.exon5;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59084109 | 59084261 | 59084109 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59083928 | 59084005 | 59083928 | ID=MS.gene40755.t1.exon6;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59083928 | 59084005 | 59083928 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| chr1.2 | exon | 59083468 | 59083710 | 59083468 | ID=MS.gene40755.t1.exon7;Parent=MS.gene40755.t1 |
| chr1.2 | CDS | 59083468 | 59083710 | 59083468 | ID=cds.MS.gene40755.t1;Parent=MS.gene40755.t1 |
| Gene Sequence |
| Protein sequence |
