AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40925

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40925.t1 MTR_3g096800 95.597 477 21 0 1 477 1 477 0.0 947
MS.gene40925.t1 MTR_3g096830 71.767 464 129 1 11 474 4 465 0.0 674
MS.gene40925.t1 MTR_3g096840 65.417 480 160 1 1 474 1 480 0.0 661
MS.gene40925.t1 MTR_3g088455 63.410 481 170 3 1 477 1 479 0.0 652
MS.gene40925.t1 MTR_8g094290 67.627 451 146 0 27 477 25 475 0.0 652
MS.gene40925.t1 MTR_3g088475 62.448 482 174 4 1 477 1 480 0.0 634
MS.gene40925.t1 MTR_4g073520 59.794 485 183 3 5 477 28 512 0.0 619
MS.gene40925.t1 MTR_4g073520 59.794 485 183 3 5 477 28 512 0.0 619
MS.gene40925.t1 MTR_1g029750 61.667 480 177 3 5 477 4 483 0.0 609
MS.gene40925.t1 MTR_1g007380 52.790 466 213 4 18 476 6 471 0.0 533
MS.gene40925.t1 MTR_3g110660 51.452 482 227 5 1 476 1 481 0.0 530
MS.gene40925.t1 MTR_1g105980 54.167 456 204 2 26 476 15 470 0.0 524
MS.gene40925.t1 MTR_1g105995 52.174 460 215 3 20 474 8 467 1.27e-176 504
MS.gene40925.t1 MTR_3g088465 62.694 386 137 4 1 381 1 384 1.19e-175 499
MS.gene40925.t1 MTR_1g105990 52.516 457 209 3 20 468 8 464 1.06e-174 499
MS.gene40925.t1 MTR_1g106000 50.437 458 213 4 33 476 15 472 7.83e-170 486
MS.gene40925.t1 MTR_1g007270 47.589 477 240 4 1 474 1 470 2.76e-164 473
MS.gene40925.t1 MTR_3g461440 49.550 444 219 2 26 466 16 457 3.28e-164 472
MS.gene40925.t1 MTR_3g461470 49.550 444 219 2 26 466 16 457 2.86e-162 467
MS.gene40925.t1 MTR_3g061390 49.550 444 219 2 26 466 16 457 1.71e-160 462
MS.gene40925.t1 MTR_3g110420 47.598 458 227 5 24 473 15 467 8.89e-156 451
MS.gene40925.t1 MTR_5g096840 45.842 469 245 4 2 466 1 464 5.64e-155 449
MS.gene40925.t1 MTR_3g461430 48.055 437 222 2 30 463 27 461 4.54e-154 448
MS.gene40925.t1 MTR_3g461480 48.043 460 233 3 10 465 4 461 4.86e-149 433
MS.gene40925.t1 MTR_1g007240 46.374 455 231 5 27 474 6 454 3.59e-147 428
MS.gene40925.t1 MTR_1g007180 44.835 455 238 5 27 474 6 454 4.92e-147 428
MS.gene40925.t1 MTR_2g031750 45.197 458 243 5 21 474 1 454 5.32e-146 425
MS.gene40925.t1 MTR_3g110430 46.072 471 247 4 9 473 33 502 7.89e-141 414
MS.gene40925.t1 MTR_3g110660 54.810 343 151 4 1 340 1 342 1.25e-133 391
MS.gene40925.t1 MTR_5g096850 43.836 438 240 4 33 466 25 460 2.96e-127 378
MS.gene40925.t1 MTR_3g461440 48.910 321 159 2 149 466 2 320 1.65e-114 340
MS.gene40925.t1 MTR_2g031750 43.229 384 211 4 95 474 7 387 8.64e-113 338
MS.gene40925.t1 MTR_3g110420 47.516 322 160 3 24 340 15 332 1.56e-103 313
MS.gene40925.t1 MTR_5g017200 63.415 246 79 3 27 272 26 260 2.46e-98 297
MS.gene40925.t1 MTR_1g007180 41.584 303 170 4 176 474 71 370 8.94e-82 258
MS.gene40925.t1 MTR_6g022790 29.801 453 268 10 33 474 42 455 6.91e-49 174
MS.gene40925.t1 MTR_1g007190 43.439 221 88 4 43 263 20 203 5.94e-48 164
MS.gene40925.t1 MTR_2g101920 29.464 448 263 11 4 438 18 425 7.48e-48 171
MS.gene40925.t1 MTR_5g054730 32.334 467 254 16 20 470 15 435 1.06e-46 167
MS.gene40925.t1 MTR_8g080120 28.728 456 282 12 28 474 15 436 2.65e-45 164
MS.gene40925.t1 MTR_1g070470 27.313 454 291 13 27 473 16 437 1.49e-44 162
MS.gene40925.t1 MTR_4g103890 28.728 456 261 14 34 471 11 420 2.24e-43 158
MS.gene40925.t1 MTR_1g093020 30.238 463 286 11 13 470 3 433 1.14e-42 157
MS.gene40925.t1 MTR_1g093020 30.947 433 262 11 13 440 3 403 4.73e-42 154
MS.gene40925.t1 MTR_7g038910 28.664 464 294 10 17 474 11 443 1.29e-39 149
MS.gene40925.t1 MTR_6g022780 29.268 451 272 10 34 474 15 428 1.53e-39 148
MS.gene40925.t1 MTR_1g093030 28.665 457 268 10 29 470 20 433 6.63e-39 146
MS.gene40925.t1 MTR_6g023075 29.095 464 279 11 24 474 2 428 8.75e-39 146
MS.gene40925.t1 MTR_7g038910 28.497 386 239 10 17 396 11 365 6.20e-38 143
MS.gene40925.t1 MTR_4g055610 27.004 474 284 14 27 475 25 461 2.34e-37 142
MS.gene40925.t1 MTR_7g038910 29.769 346 220 8 17 356 11 339 7.25e-37 139
MS.gene40925.t1 MTR_3g005740 29.754 447 278 10 34 474 53 469 1.98e-36 140
MS.gene40925.t1 MTR_6g023065 27.500 480 306 13 3 474 18 463 9.04e-36 138
MS.gene40925.t1 MTR_2g096830 28.696 460 286 10 24 474 2 428 2.43e-35 136
MS.gene40925.t1 MTR_8g099320 26.501 483 304 17 7 476 6 450 7.93e-34 132
MS.gene40925.t1 MTR_3g085820 27.000 400 253 11 4 398 5 370 1.59e-32 128
MS.gene40925.t1 MTR_1g492640 26.966 445 280 16 44 476 70 481 1.93e-32 129
MS.gene40925.t1 MTR_2g096830 29.377 337 209 9 24 351 2 318 8.72e-31 122
MS.gene40925.t1 MTR_4g075750 25.104 482 316 16 11 472 45 501 2.95e-29 120
MS.gene40925.t1 MTR_0531s0020 30.247 324 200 9 33 350 49 352 4.60e-29 117
MS.gene40925.t1 MTR_3g115090 25.216 464 282 14 27 464 75 499 2.00e-28 118
MS.gene40925.t1 MTR_5g023260 23.810 462 306 12 19 465 93 523 3.51e-23 102
MS.gene40925.t1 MTR_5g081630 25.962 416 267 14 64 475 4 382 8.36e-23 100
MS.gene40925.t1 MTR_1g492640 26.913 379 233 15 110 476 3 349 1.05e-21 96.7
MS.gene40925.t1 MTR_5g023240 23.341 437 286 12 20 440 73 476 9.44e-21 95.5
MS.gene40925.t1 MTR_1g492640 27.476 313 197 13 44 346 52 344 1.21e-20 93.6
MS.gene40925.t1 MTR_1g492640 27.476 313 197 13 44 346 70 362 1.45e-20 93.6
MS.gene40925.t1 MTR_2g012470 24.845 483 290 18 19 472 81 519 5.55e-18 87.0
MS.gene40925.t1 MTR_4g104510 23.239 426 264 15 64 475 71 447 3.12e-16 81.3
MS.gene40925.t1 MTR_4g104510 22.353 425 271 12 64 475 71 449 9.03e-16 79.7
MS.gene40925.t1 MTR_3g069960 24.059 478 290 18 22 475 7 435 1.34e-14 76.3
MS.gene40925.t1 MTR_3g069960 23.529 408 257 15 79 475 19 382 2.23e-13 72.0
MS.gene40925.t1 MTR_1g492640 27.485 171 110 6 44 212 70 228 4.02e-11 63.9
MS.gene40925.t1 MTR_1g492640 27.485 171 110 6 44 212 52 210 4.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40925.t1 AT5G09220 64.819 469 161 2 13 477 25 493 0.0 656
MS.gene40925.t1 AT1G77380 65.517 464 157 1 17 477 13 476 0.0 649
MS.gene40925.t1 AT5G63850 64.912 456 156 2 26 477 11 466 0.0 642
MS.gene40925.t1 AT1G44100 59.158 475 184 4 12 477 7 480 0.0 610
MS.gene40925.t1 AT5G49630 56.798 456 191 4 26 475 25 480 0.0 528
MS.gene40925.t1 AT1G10010 53.642 453 206 2 27 475 21 473 0.0 526
MS.gene40925.t1 AT1G10010 53.642 453 206 2 27 475 22 474 0.0 526
MS.gene40925.t1 AT1G58360 53.145 461 211 3 22 477 24 484 0.0 524
MS.gene40925.t1 AT5G23810 47.748 444 216 6 7 442 5 440 7.95e-137 402
MS.gene40925.t1 AT5G23810 48.538 342 165 5 7 345 5 338 4.23e-101 307
MS.gene40925.t1 AT5G23810 46.586 249 124 4 18 263 14 256 1.50e-67 218
MS.gene40925.t1 AT5G23810 45.972 211 105 4 7 214 5 209 1.44e-53 180
MS.gene40925.t1 AT5G23810 45.972 211 105 4 7 214 5 209 1.44e-53 180
MS.gene40925.t1 AT1G48640 29.325 474 294 12 7 474 15 453 2.68e-47 170
MS.gene40925.t1 AT5G40780 29.663 445 277 10 34 474 34 446 2.55e-46 167
MS.gene40925.t1 AT1G67640 29.736 454 280 11 28 474 20 441 1.30e-42 157
MS.gene40925.t1 AT5G40780 29.535 430 267 10 49 474 1 398 1.91e-42 155
MS.gene40925.t1 AT5G40780 29.535 430 267 10 49 474 1 398 1.91e-42 155
MS.gene40925.t1 AT1G61270 27.193 456 293 12 22 469 19 443 6.98e-41 152
MS.gene40925.t1 AT1G24400 28.510 463 274 15 28 474 20 441 9.70e-41 152
MS.gene40925.t1 AT3G01760 25.214 468 306 11 16 468 3 441 8.76e-40 149
MS.gene40925.t1 AT1G25530 28.477 453 270 11 32 471 26 437 6.81e-37 141
MS.gene40925.t1 AT1G71680 27.423 485 291 14 7 474 8 448 9.53e-35 135
MS.gene40925.t1 AT1G08230 29.231 455 279 14 33 475 27 450 1.61e-32 129
MS.gene40925.t1 AT1G71680 28.532 361 211 12 7 350 8 338 3.00e-30 121
MS.gene40925.t1 AT5G41800 25.219 456 297 12 33 476 26 449 4.67e-26 110
MS.gene40925.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene40925.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene40925.t1 AT1G08230 30.745 322 193 9 163 475 31 331 2.61e-24 103
MS.gene40925.t1 AT1G08230 30.745 322 193 9 163 475 50 350 3.15e-24 103
MS.gene40925.t1 AT2G39890 24.519 416 273 14 64 475 63 441 2.42e-21 96.7
MS.gene40925.t1 AT2G39890 24.519 416 273 14 64 475 63 441 2.42e-21 96.7
MS.gene40925.t1 AT2G39890 24.519 416 273 14 64 475 4 382 3.14e-21 95.9
MS.gene40925.t1 AT2G36590 24.632 475 309 17 9 475 2 435 5.78e-21 95.5
MS.gene40925.t1 AT3G55740 24.940 417 270 13 64 475 60 438 1.02e-20 94.7
MS.gene40925.t1 AT3G55740 25.120 418 268 14 64 475 4 382 1.26e-20 94.0
MS.gene40925.t1 AT3G55740 25.120 418 268 14 64 475 4 382 1.26e-20 94.0
MS.gene40925.t1 AT1G47670 24.895 474 301 15 19 472 79 517 2.90e-18 87.8
MS.gene40925.t1 AT4G35180 23.529 459 292 13 34 473 58 476 2.57e-16 81.6
MS.gene40925.t1 AT4G35180 25.271 277 187 5 33 305 57 317 2.72e-13 71.2
MS.gene40925.t1 AT2G36590 24.332 337 224 12 9 340 2 312 9.78e-12 66.6

Find 113 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTAGAACTCCATTT+TGG 0.108522 3.2:+80721778 None:intergenic
GTTCAGTACTTGTATCTTTA+TGG 0.129160 3.2:-80723632 MS.gene40925:CDS
TCCTTTCTTTAATGATGTTC+TGG 0.137749 3.2:-80721878 MS.gene40925:CDS
TTCTTGGAGCAGTGGGATTT+TGG 0.180772 3.2:-80721852 MS.gene40925:CDS
AATGATGTTCTGGGATTTCT+TGG 0.212555 3.2:-80721868 MS.gene40925:CDS
ACTGGATAATAAACTGTTAA+AGG 0.224075 3.2:+80721829 None:intergenic
TCAAATTCTCATTGAAATTC+AGG 0.231508 3.2:-80722403 MS.gene40925:intron
CCATCGTCGTCGAAGTATTC+AGG 0.273974 3.2:+80724501 None:intergenic
TAAATCTATTTAGATTAGTT+TGG 0.281769 3.2:-80721945 MS.gene40925:CDS
CCTTTCTTTAATGATGTTCT+GGG 0.306108 3.2:-80721877 MS.gene40925:CDS
TCCCAAAATGGAGTTCTAAA+TGG 0.320619 3.2:-80721780 MS.gene40925:CDS
TGAATGGCTTGTAATGCTTT+AGG 0.330057 3.2:+80721674 None:intergenic
TCCAGCTTGGCTCATCGATT+TGG 0.332874 3.2:-80722118 MS.gene40925:CDS
TATCTTTATGGCAGTGCAAT+AGG 0.337033 3.2:-80723620 MS.gene40925:CDS
ATAGCTGCAATAATGTCTTT+TGG 0.346313 3.2:-80722886 MS.gene40925:CDS
AGCATGGGCTACGGCACAAT+TGG 0.349061 3.2:-80724120 MS.gene40925:CDS
TCTAGATGTCTCCATTTATC+AGG 0.357700 3.2:-80723021 MS.gene40925:CDS
AACGACGATAACCTGCTGTT+TGG 0.358251 3.2:+80722830 None:intergenic
AACCCATACATGATCAGTTT+TGG 0.359942 3.2:-80722970 MS.gene40925:CDS
ATCAACTCACATCATGCTAA+TGG 0.372993 3.2:+80723580 None:intergenic
TTCTGAAGGGACACCATCTA+TGG 0.373125 3.2:+80724530 None:intergenic
TAATGTGTACCTGTTCGTTT+AGG 0.376426 3.2:+80724474 None:intergenic
TGCATGGGCTATGCTGCATT+TGG 0.377828 3.2:-80722186 MS.gene40925:CDS
CTAAATAGATTTAGATTGTA+AGG 0.384304 3.2:+80721955 None:intergenic
GATGCAGTTCGTAGCATTCT+TGG 0.385053 3.2:-80723972 MS.gene40925:intron
CATATAATAACAGCTGTGAT+TGG 0.385307 3.2:-80724161 MS.gene40925:CDS
GTATCAGTTGTGGCTGCTCT+TGG 0.389248 3.2:-80721721 MS.gene40925:CDS
CTTTAGGTCCTCTATAATAC+TGG 0.396377 3.2:+80721690 None:intergenic
GGGTTGGATTGGTGGTCCTT+TGG 0.399149 3.2:-80724099 MS.gene40925:CDS
ATAACAGCTGTGATTGGGTC+TGG 0.401374 3.2:-80724155 MS.gene40925:CDS
GTTATGAGACAGGAACAATA+TGG 0.408071 3.2:-80724196 MS.gene40925:intron
ACTCCAAAACTGATCATGTA+TGG 0.410066 3.2:+80722967 None:intergenic
CTGGGATTTCTTGGAGCAGT+GGG 0.412618 3.2:-80721859 MS.gene40925:CDS
TGCAAAGGAAGATCCCAAAA+TGG 0.417168 3.2:-80721792 MS.gene40925:CDS
ACGACGATAACCTGCTGTTT+GGG 0.418197 3.2:+80722831 None:intergenic
ACAAAGTGACGAGGCTGAAA+AGG 0.428865 3.2:+80724069 None:intergenic
TTATTTGCTTTGTGGCTGCA+TGG 0.440989 3.2:-80722202 MS.gene40925:CDS
ACCTTCAAGGGTACTCTCAC+TGG 0.442148 3.2:-80722513 MS.gene40925:CDS
AACAGAAAATGGTACCTTCA+AGG 0.444400 3.2:-80722526 MS.gene40925:intron
AACCGGAGCCATTCCATAGA+TGG 0.448209 3.2:-80724543 MS.gene40925:CDS
CTGGGGTGCTATCCTTAGCA+TGG 0.450709 3.2:-80724136 MS.gene40925:CDS
GTCTTTGCCTTCGTAGAGAA+AGG 0.451734 3.2:-80722039 MS.gene40925:CDS
TCAACTCACATCATGCTAAT+GGG 0.455025 3.2:+80723581 None:intergenic
AAGAAGAAATAGAAAGAAAC+CGG 0.458125 3.2:-80724560 MS.gene40925:CDS
ACATTGCAACAAAAGTAGTT+AGG 0.463138 3.2:+80721905 None:intergenic
CTATTCCACAAACCGTGTAT+TGG 0.465036 3.2:+80723654 None:intergenic
GCATGGGCTACGGCACAATT+GGG 0.465627 3.2:-80724119 MS.gene40925:CDS
TCCAGTGAGAGTACCCTTGA+AGG 0.465923 3.2:+80722512 None:intergenic
GCACAATTGGGTTGGATTGG+TGG 0.466018 3.2:-80724107 MS.gene40925:CDS
TAAGGACGAAAACCCGGGAT+TGG 0.471537 3.2:+80721973 None:intergenic
GTCAACAACAACAAAATTGT+GGG 0.475137 3.2:-80722472 MS.gene40925:CDS
GCCAAATCGATGAGCCAAGC+TGG 0.477067 3.2:+80722117 None:intergenic
GGGCGCCAATACACGGTTTG+TGG 0.479067 3.2:-80723659 MS.gene40925:CDS
TATTTGCTTTGTGGCTGCAT+GGG 0.481138 3.2:-80722201 MS.gene40925:CDS
TAGCTTCTCTTTCCATGCAC+AGG 0.488301 3.2:+80724005 None:intergenic
ATATAATAACAGCTGTGATT+GGG 0.488499 3.2:-80724160 MS.gene40925:CDS
GGGCTACGGCACAATTGGGT+TGG 0.489975 3.2:-80724115 MS.gene40925:CDS
TGCTGCTCCTTTCTCTACGA+AGG 0.498588 3.2:+80722032 None:intergenic
GCCGTCGTAATCCACCTTGT+GGG 0.501113 3.2:-80722087 MS.gene40925:CDS
CCCAGAACATCATTAAAGAA+AGG 0.503059 3.2:+80721877 None:intergenic
GCACCAGGGAACTTGCTCAC+TGG 0.503377 3.2:-80722156 MS.gene40925:CDS
TTCTCTACGAAGGCAAAGAC+AGG 0.507161 3.2:+80722042 None:intergenic
CTCAACCGCCAGTATTATAG+AGG 0.511484 3.2:-80721698 MS.gene40925:CDS
ATGCTTTATTGTATCAGTTG+TGG 0.512651 3.2:-80721731 MS.gene40925:CDS
GATGGTCGTCCTAAACGAAC+AGG 0.514219 3.2:-80724483 MS.gene40925:intron
TTAGCAATTTCCCAAACAGC+AGG 0.515563 3.2:-80722841 MS.gene40925:intron
TAACAGCTGTGATTGGGTCT+GGG 0.516920 3.2:-80724154 MS.gene40925:CDS
ACAGAAAATGGTACCTTCAA+GGG 0.518566 3.2:-80722525 MS.gene40925:intron
TGTCAACAACAACAAAATTG+TGG 0.522475 3.2:-80722473 MS.gene40925:CDS
GATTGTAAGGACGAAAACCC+GGG 0.523575 3.2:+80721968 None:intergenic
GGAACACAAAATTCCAATCC+CGG 0.528501 3.2:-80721986 MS.gene40925:CDS
GCATTTGGAGAACAAGCACC+AGG 0.529176 3.2:-80722171 MS.gene40925:CDS
CACCATCTATGGAATGGCTC+CGG 0.534833 3.2:+80724541 None:intergenic
TGCCGTCGTAATCCACCTTG+TGG 0.547983 3.2:-80722088 MS.gene40925:CDS
ACGGCACAATTGGGTTGGAT+TGG 0.551307 3.2:-80724110 MS.gene40925:CDS
TATTCAGGATCAAGTTCTGA+AGG 0.553591 3.2:+80724516 None:intergenic
AAGATGGCCCCAAACAAAAG+TGG 0.554048 3.2:-80722007 MS.gene40925:CDS
GCTCAATACTCTGAGCTGAA+TGG 0.555896 3.2:+80721658 None:intergenic
AGACAGGTTGAACATATACT+TGG 0.557340 3.2:+80722058 None:intergenic
TGCAGGCGGGCGCCAATACA+CGG 0.557733 3.2:-80723666 MS.gene40925:intron
AGATTGTAAGGACGAAAACC+CGG 0.560505 3.2:+80721967 None:intergenic
CTCCAAAACTGATCATGTAT+GGG 0.563692 3.2:+80722968 None:intergenic
TCTGGGATTTCTTGGAGCAG+TGG 0.566045 3.2:-80721860 MS.gene40925:CDS
AATCCAGTGAGCAAGTTCCC+TGG 0.566335 3.2:+80722153 None:intergenic
TTTAACAGTTTATTATCCAG+TGG 0.568524 3.2:-80721827 MS.gene40925:CDS
TGCAAGATATACATCTCCAC+TGG 0.575990 3.2:+80721811 None:intergenic
TGGGGTGCTATCCTTAGCAT+GGG 0.576138 3.2:-80724135 MS.gene40925:CDS
TTAGTATGTACAATCCAGCT+TGG 0.584076 3.2:-80722131 MS.gene40925:CDS
AACAGCTGTGATTGGGTCTG+GGG 0.588270 3.2:-80724153 MS.gene40925:CDS
GAACACAAAATTCCAATCCC+GGG 0.593016 3.2:-80721985 MS.gene40925:CDS
AAGGGACACCATCTATGGAA+TGG 0.597405 3.2:+80724535 None:intergenic
CCTGAATACTTCGACGACGA+TGG 0.603286 3.2:-80724501 MS.gene40925:CDS
TTGTGCCGTAGCCCATGCTA+AGG 0.606269 3.2:+80724124 None:intergenic
TGGAGATGTATATCTTGCAA+AGG 0.629124 3.2:-80721807 MS.gene40925:CDS
TTGAGAGTATGAATAAGCAA+AGG 0.634614 3.2:+80722422 None:intergenic
AGATGTCTCCATTTATCAGG+AGG 0.634869 3.2:-80723018 MS.gene40925:CDS
TAGGTCCTCTATAATACTGG+CGG 0.635831 3.2:+80721693 None:intergenic
CTAGCTGAATGTTATCGTTG+TGG 0.636182 3.2:-80724032 MS.gene40925:CDS
CGTTGTGGAGATCCTGTGCA+TGG 0.641437 3.2:-80724017 MS.gene40925:CDS
TTCCAGAGTTTCATAATACG+TGG 0.645176 3.2:-80722921 MS.gene40925:CDS
CACCACGTATTATGAAACTC+TGG 0.648752 3.2:+80722919 None:intergenic
ATTCAGGATCAAGTTCTGAA+GGG 0.648974 3.2:+80724517 None:intergenic
TTCAAGGGTACTCTCACTGG+AGG 0.649496 3.2:-80722510 MS.gene40925:CDS
GGGTTGCTTGACATGTGACA+TGG 0.650556 3.2:+80722988 None:intergenic
CTGAAAAGGATCATCACCAA+AGG 0.653603 3.2:+80724083 None:intergenic
TCAACAACAACAAAATTGTG+GGG 0.655949 3.2:-80722471 MS.gene40925:CDS
GCTATCCTTAGCATGGGCTA+CGG 0.662463 3.2:-80724129 MS.gene40925:CDS
CAGAGTTTCATAATACGTGG+TGG 0.670066 3.2:-80722918 MS.gene40925:CDS
CTTGGTATGCTCCCACAAGG+TGG 0.675365 3.2:+80722076 None:intergenic
ATACTTGGTATGCTCCCACA+AGG 0.692310 3.2:+80722073 None:intergenic
ATGAAGTATACAAAGTGACG+AGG 0.719582 3.2:+80724060 None:intergenic
TCCCACAAGGTGGATTACGA+CGG 0.722373 3.2:+80722086 None:intergenic
CATTTGGAGAACAAGCACCA+GGG 0.723647 3.2:-80722170 MS.gene40925:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAATTAATT+CGG - chr3.2:80723644-80723663 MS.gene40925:CDS 0.0%
!! AAAAAAAAAAAATTAATTCG+GGG - chr3.2:80723646-80723665 MS.gene40925:CDS 10.0%
!!! ATTTTAATTAAGATAAAGAA+AGG + chr3.2:80723867-80723886 None:intergenic 10.0%
!!! TTATATAATTTTACGTTAAA+TGG - chr3.2:80721786-80721805 MS.gene40925:CDS 10.0%
!!! TTTTAATTAAGATAAAGAAA+GGG + chr3.2:80723866-80723885 None:intergenic 10.0%
!!! TTTTTATGTCTAATTTTTAT+GGG - chr3.2:80721963-80721982 MS.gene40925:CDS 10.0%
!!! TTTTTTATGTCTAATTTTTA+TGG - chr3.2:80721962-80721981 MS.gene40925:CDS 10.0%
!! AAAAAAAAAAAAACCATTGA+TGG - chr3.2:80723027-80723046 MS.gene40925:CDS 15.0%
!! ATATATTAATTACCATTAGT+GGG - chr3.2:80722842-80722861 MS.gene40925:CDS 15.0%
!!! AAAGCATGTATATTATTTTT+TGG - chr3.2:80722441-80722460 MS.gene40925:CDS 15.0%
!!! TAAATCTATTTAGATTAGTT+TGG - chr3.2:80724282-80724301 MS.gene40925:intron 15.0%
!!! TGATGAGTTTATTTTAATTT+GGG - chr3.2:80723164-80723183 MS.gene40925:intron 15.0%
!!! TTGATGAGTTTATTTTAATT+TGG - chr3.2:80723163-80723182 MS.gene40925:intron 15.0%
!! ATAAGTATAACCTAAAAAGA+AGG - chr3.2:80722986-80723005 MS.gene40925:CDS 20.0%
!! ATGCTTGTAAAAGATAATTA+CGG + chr3.2:80722681-80722700 None:intergenic 20.0%
!! CTAAATAGATTTAGATTGTA+AGG + chr3.2:80724275-80724294 None:intergenic 20.0%
!! GATATATTAATTACCATTAG+TGG - chr3.2:80722841-80722860 MS.gene40925:intron 20.0%
!! TCTTACTTCTATTATTGATA+GGG - chr3.2:80723121-80723140 MS.gene40925:intron 20.0%
!!! AATGTGTTTGTATTTAAGAT+CGG - chr3.2:80722374-80722393 MS.gene40925:intron 20.0%
!!! ACTGATTTTTAAACAGAAAA+TGG - chr3.2:80723690-80723709 MS.gene40925:intron 20.0%
!!! ATTCTTCATCGTTTTTATTT+CGG + chr3.2:80723970-80723989 None:intergenic 20.0%
!!! TATATATTTTTACTACACAC+AGG - chr3.2:80723923-80723942 MS.gene40925:intron 20.0%
!!! TGTGTTAAATTTTCATTACT+AGG + chr3.2:80722001-80722020 None:intergenic 20.0%
!!! TTAAATTTTCATTACTAGGA+GGG + chr3.2:80721997-80722016 None:intergenic 20.0%
!!! TTTTTTTTTTGTTATGAGAC+AGG - chr3.2:80722021-80722040 MS.gene40925:CDS 20.0%
! AAGAAGAAATAGAAAGAAAC+CGG - chr3.2:80721667-80721686 MS.gene40925:CDS 25.0%
! ACTGGATAATAAACTGTTAA+AGG + chr3.2:80724401-80724420 None:intergenic 25.0%
! ATATAATAACAGCTGTGATT+GGG - chr3.2:80722067-80722086 MS.gene40925:CDS 25.0%
! ATTCTTGATCATGTACTTTA+CGG - chr3.2:80723563-80723582 MS.gene40925:intron 25.0%
! GAATTTCACAAGTTTACATT+TGG - chr3.2:80721880-80721899 MS.gene40925:CDS 25.0%
! GATGTAATATTCTTAAGAGT+TGG - chr3.2:80722500-80722519 MS.gene40925:CDS 25.0%
! GTCTTACTTCTATTATTGAT+AGG - chr3.2:80723120-80723139 MS.gene40925:intron 25.0%
! TCAAATTCTCATTGAAATTC+AGG - chr3.2:80723824-80723843 MS.gene40925:intron 25.0%
! TGTAAAAGATAATTACGGTA+TGG + chr3.2:80722676-80722695 None:intergenic 25.0%
! TTTAACAGTTTATTATCCAG+TGG - chr3.2:80724400-80724419 MS.gene40925:intron 25.0%
!! ACAAATGCTAATAGGTATTT+TGG + chr3.2:80723102-80723121 None:intergenic 25.0%
!! CAATATCAATCCTTCTTTTT+AGG + chr3.2:80722999-80723018 None:intergenic 25.0%
!! GTTAAATTTTCATTACTAGG+AGG + chr3.2:80721998-80722017 None:intergenic 25.0%
!! TAGTTTCAAACATAATTTGC+AGG - chr3.2:80722544-80722563 MS.gene40925:intron 25.0%
!!! ACATATTTTTGATCCATCAA+TGG + chr3.2:80723043-80723062 None:intergenic 25.0%
!!! TTATTTTAATTTGGGTGACA+GGG - chr3.2:80723172-80723191 MS.gene40925:intron 25.0%
!!! TTTATTTTAATTTGGGTGAC+AGG - chr3.2:80723171-80723190 MS.gene40925:intron 25.0%
ACATTGCAACAAAAGTAGTT+AGG + chr3.2:80724325-80724344 None:intergenic 30.0%
ATCAAACAATTGTACTCAAG+TGG - chr3.2:80723488-80723507 MS.gene40925:intron 30.0%
CATATAATAACAGCTGTGAT+TGG - chr3.2:80722066-80722085 MS.gene40925:CDS 30.0%
CCTTTCTTTAATGATGTTCT+GGG - chr3.2:80724350-80724369 MS.gene40925:intron 30.0%
GAAGTAAGACAAATGCTAAT+AGG + chr3.2:80723110-80723129 None:intergenic 30.0%
GTCAACAACAACAAAATTGT+GGG - chr3.2:80723755-80723774 MS.gene40925:intron 30.0%
GTTCAGTACTTGTATCTTTA+TGG - chr3.2:80722595-80722614 MS.gene40925:intron 30.0%
TCAACAACAACAAAATTGTG+GGG - chr3.2:80723756-80723775 MS.gene40925:intron 30.0%
TCCTTTCTTTAATGATGTTC+TGG - chr3.2:80724349-80724368 MS.gene40925:intron 30.0%
TGTCAACAACAACAAAATTG+TGG - chr3.2:80723754-80723773 MS.gene40925:intron 30.0%
TTACATCCAAAAGTAGAACT+TGG + chr3.2:80723541-80723560 None:intergenic 30.0%
TTTGCTTGTATTTAAGAGCA+TGG + chr3.2:80722321-80722340 None:intergenic 30.0%
! AAAGAGAAGCTATACTTTTG+TGG - chr3.2:80722233-80722252 MS.gene40925:CDS 30.0%
! AGAACTTGGTTCTCTAAATT+TGG + chr3.2:80723527-80723546 None:intergenic 30.0%
! ATAGCTGCAATAATGTCTTT+TGG - chr3.2:80723341-80723360 MS.gene40925:intron 30.0%
! ATGCTTTATTGTATCAGTTG+TGG - chr3.2:80724496-80724515 MS.gene40925:CDS 30.0%
! TTGAGAGTATGAATAAGCAA+AGG + chr3.2:80723808-80723827 None:intergenic 30.0%
! TTGCTTGTATTTAAGAGCAT+GGG + chr3.2:80722320-80722339 None:intergenic 30.0%
! TTTCAAACATAATTTGCAGG+CGG - chr3.2:80722547-80722566 MS.gene40925:intron 30.0%
!! ACAGCATTTTATTTGCTTTG+TGG - chr3.2:80724017-80724036 MS.gene40925:CDS 30.0%
!! ATCCATTTAGAACTCCATTT+TGG + chr3.2:80724452-80724471 None:intergenic 30.0%
!! TCCATTTAGAACTCCATTTT+GGG + chr3.2:80724451-80724470 None:intergenic 30.0%
!! TTCATCGTTTTTATTTCGGA+TGG + chr3.2:80723966-80723985 None:intergenic 30.0%
!! TTTGTGTTCCACTTTTGTTT+GGG + chr3.2:80724231-80724250 None:intergenic 30.0%
!! TTTTGTGTTCCACTTTTGTT+TGG + chr3.2:80724232-80724251 None:intergenic 30.0%
!!! GAGTTCTAAATGGATTTTGT+TGG - chr3.2:80724457-80724476 MS.gene40925:intron 30.0%
!!! TGTTAACAGTCTCGTTTTTT+GGG + chr3.2:80723622-80723641 None:intergenic 30.0%
AACAGAAAATGGTACCTTCA+AGG - chr3.2:80723701-80723720 MS.gene40925:intron 35.0%
ACAGAAAATGGTACCTTCAA+GGG - chr3.2:80723702-80723721 MS.gene40925:intron 35.0%
ACTCCAAAACTGATCATGTA+TGG + chr3.2:80723263-80723282 None:intergenic 35.0%
ATCAACTCACATCATGCTAA+TGG + chr3.2:80722650-80722669 None:intergenic 35.0%
ATGAAGTATACAAAGTGACG+AGG + chr3.2:80722170-80722189 None:intergenic 35.0%
CCCAGAACATCATTAAAGAA+AGG + chr3.2:80724353-80724372 None:intergenic 35.0%
CTCCAAAACTGATCATGTAT+GGG + chr3.2:80723262-80723281 None:intergenic 35.0%
CTTTAGGTCCTCTATAATAC+TGG + chr3.2:80724540-80724559 None:intergenic 35.0%
GTTATGAGACAGGAACAATA+TGG - chr3.2:80722031-80722050 MS.gene40925:CDS 35.0%
TAATGTGTACCTGTTCGTTT+AGG + chr3.2:80721756-80721775 None:intergenic 35.0%
TATCTTTATGGCAGTGCAAT+AGG - chr3.2:80722607-80722626 MS.gene40925:intron 35.0%
TCAACTCACATCATGCTAAT+GGG + chr3.2:80722649-80722668 None:intergenic 35.0%
TCTAGATGTCTCCATTTATC+AGG - chr3.2:80723206-80723225 MS.gene40925:intron 35.0%
TGGAGATGTATATCTTGCAA+AGG - chr3.2:80724420-80724439 MS.gene40925:intron 35.0%
TTAGTATGTACAATCCAGCT+TGG - chr3.2:80724096-80724115 MS.gene40925:CDS 35.0%
TTCCAGAGTTTCATAATACG+TGG - chr3.2:80723306-80723325 MS.gene40925:intron 35.0%
! AACCCATACATGATCAGTTT+TGG - chr3.2:80723257-80723276 MS.gene40925:intron 35.0%
! AGACAGGTTGAACATATACT+TGG + chr3.2:80724172-80724191 None:intergenic 35.0%
! AGAGAACCAAGTTCTACTTT+TGG - chr3.2:80723532-80723551 MS.gene40925:intron 35.0%
! GATCTTTTCCTCCTGATAAA+TGG + chr3.2:80723220-80723239 None:intergenic 35.0%
! TATTCAGGATCAAGTTCTGA+AGG + chr3.2:80721714-80721733 None:intergenic 35.0%
! TGAATGGCTTGTAATGCTTT+AGG + chr3.2:80724556-80724575 None:intergenic 35.0%
! TTCAAACATAATTTGCAGGC+GGG - chr3.2:80722548-80722567 MS.gene40925:intron 35.0%
!! AATGATGTTCTGGGATTTCT+TGG - chr3.2:80724359-80724378 MS.gene40925:intron 35.0%
!! ATCGTTTTTATTTCGGATGG+TGG + chr3.2:80723963-80723982 None:intergenic 35.0%
!! ATTCAGGATCAAGTTCTGAA+GGG + chr3.2:80721713-80721732 None:intergenic 35.0%
!! TCCCAAAATGGAGTTCTAAA+TGG - chr3.2:80724447-80724466 MS.gene40925:intron 35.0%
!! TTGTGTTCCACTTTTGTTTG+GGG + chr3.2:80724230-80724249 None:intergenic 35.0%
!! TTGTTCTAAAGACCCACTAA+TGG + chr3.2:80722857-80722876 None:intergenic 35.0%
!!! GTGTTAACAGTCTCGTTTTT+TGG + chr3.2:80723623-80723642 None:intergenic 35.0%
!!! GTTAACAGTCTCGTTTTTTG+GGG + chr3.2:80723621-80723640 None:intergenic 35.0%
AGAAAGGAGCAGCAAAAAGA+TGG - chr3.2:80724204-80724223 MS.gene40925:intron 40.0%
AGATGTCTCCATTTATCAGG+AGG - chr3.2:80723209-80723228 MS.gene40925:intron 40.0%
AGATTGTAAGGACGAAAACC+CGG + chr3.2:80724263-80724282 None:intergenic 40.0%
CACCACGTATTATGAAACTC+TGG + chr3.2:80723311-80723330 None:intergenic 40.0%
CAGAGTTTCATAATACGTGG+TGG - chr3.2:80723309-80723328 MS.gene40925:intron 40.0%
CTAGCTGAATGTTATCGTTG+TGG - chr3.2:80722195-80722214 MS.gene40925:CDS 40.0%
CTATTCCACAAACCGTGTAT+TGG + chr3.2:80722576-80722595 None:intergenic 40.0%
CTGAAAAGGATCATCACCAA+AGG + chr3.2:80722147-80722166 None:intergenic 40.0%
GAACACAAAATTCCAATCCC+GGG - chr3.2:80724242-80724261 MS.gene40925:intron 40.0%
GGAACACAAAATTCCAATCC+CGG - chr3.2:80724241-80724260 MS.gene40925:intron 40.0%
TAGGTCCTCTATAATACTGG+CGG + chr3.2:80724537-80724556 None:intergenic 40.0%
TATTTGCTTTGTGGCTGCAT+GGG - chr3.2:80724026-80724045 MS.gene40925:CDS 40.0%
TGCAAAGGAAGATCCCAAAA+TGG - chr3.2:80724435-80724454 MS.gene40925:intron 40.0%
TGCAAGATATACATCTCCAC+TGG + chr3.2:80724419-80724438 None:intergenic 40.0%
TTAGCAATTTCCCAAACAGC+AGG - chr3.2:80723386-80723405 MS.gene40925:intron 40.0%
TTATTTGCTTTGTGGCTGCA+TGG - chr3.2:80724025-80724044 MS.gene40925:CDS 40.0%
!! GTGTCGATCTTTTGTCTTCT+TGG - chr3.2:80721902-80721921 MS.gene40925:CDS 40.0%
!! TCTTTTGGCTATTCCACAGT+TGG - chr3.2:80723356-80723375 MS.gene40925:intron 40.0%
!!! TGGGGAATTTTTCAAGCTCT+TGG - chr3.2:80723774-80723793 MS.gene40925:intron 40.0%
AACGACGATAACCTGCTGTT+TGG + chr3.2:80723400-80723419 None:intergenic 45.0%
AAGATGGCCCCAAACAAAAG+TGG - chr3.2:80724220-80724239 MS.gene40925:intron 45.0%
AAGGGACACCATCTATGGAA+TGG + chr3.2:80721695-80721714 None:intergenic 45.0%
ACAAAGTGACGAGGCTGAAA+AGG + chr3.2:80722161-80722180 None:intergenic 45.0%
ATAACAGCTGTGATTGGGTC+TGG - chr3.2:80722072-80722091 MS.gene40925:CDS 45.0%
ATACTTGGTATGCTCCCACA+AGG + chr3.2:80724157-80724176 None:intergenic 45.0%
CATTTGGAGAACAAGCACCA+GGG - chr3.2:80724057-80724076 MS.gene40925:CDS 45.0%
CTCAACCGCCAGTATTATAG+AGG - chr3.2:80724529-80724548 MS.gene40925:CDS 45.0%
GATGCAGTTCGTAGCATTCT+TGG - chr3.2:80722255-80722274 MS.gene40925:CDS 45.0%
GATTGTAAGGACGAAAACCC+GGG + chr3.2:80724262-80724281 None:intergenic 45.0%
GTCTTTGCCTTCGTAGAGAA+AGG - chr3.2:80724188-80724207 MS.gene40925:intron 45.0%
TAACAGCTGTGATTGGGTCT+GGG - chr3.2:80722073-80722092 MS.gene40925:CDS 45.0%
TAGCTTCTCTTTCCATGCAC+AGG + chr3.2:80722225-80722244 None:intergenic 45.0%
TGCTAAAAAGACGCCAACTG+TGG + chr3.2:80723372-80723391 None:intergenic 45.0%
TTCTCTACGAAGGCAAAGAC+AGG + chr3.2:80724188-80724207 None:intergenic 45.0%
! ACGACGATAACCTGCTGTTT+GGG + chr3.2:80723399-80723418 None:intergenic 45.0%
! TTCTGAAGGGACACCATCTA+TGG + chr3.2:80721700-80721719 None:intergenic 45.0%
! TTCTTGGAGCAGTGGGATTT+TGG - chr3.2:80724375-80724394 MS.gene40925:intron 45.0%
!!! CAGTCTCGTTTTTTGGGGAA+AGG + chr3.2:80723616-80723635 None:intergenic 45.0%
!! AAAAAAAAAAAAATTAATTC+GGG - chr3.2:80723645-80723664 MS.gene40925:CDS 5.0%
AACAGCTGTGATTGGGTCTG+GGG - chr3.2:80722074-80722093 MS.gene40925:CDS 50.0%
AACCGGAGCCATTCCATAGA+TGG - chr3.2:80721684-80721703 MS.gene40925:CDS 50.0%
AATCCAGTGAGCAAGTTCCC+TGG + chr3.2:80724077-80724096 None:intergenic 50.0%
ACGGTAACTCGAACGAACTC+AGG - chr3.2:80723582-80723601 MS.gene40925:intron 50.0%
CACCATCTATGGAATGGCTC+CGG + chr3.2:80721689-80721708 None:intergenic 50.0%
CCTGAATACTTCGACGACGA+TGG - chr3.2:80721726-80721745 MS.gene40925:CDS 50.0%
CTGGGATTTCTTGGAGCAGT+GGG - chr3.2:80724368-80724387 MS.gene40925:intron 50.0%
GATGGTCGTCCTAAACGAAC+AGG - chr3.2:80721744-80721763 MS.gene40925:CDS 50.0%
GCATTTGGAGAACAAGCACC+AGG - chr3.2:80724056-80724075 MS.gene40925:CDS 50.0%
GGGTTGCTTGACATGTGACA+TGG + chr3.2:80723242-80723261 None:intergenic 50.0%
GTATCAGTTGTGGCTGCTCT+TGG - chr3.2:80724506-80724525 MS.gene40925:CDS 50.0%
TAAGGACGAAAACCCGGGAT+TGG + chr3.2:80724257-80724276 None:intergenic 50.0%
TGCTGCTCCTTTCTCTACGA+AGG + chr3.2:80724198-80724217 None:intergenic 50.0%
! CCATCGTCGTCGAAGTATTC+AGG + chr3.2:80721729-80721748 None:intergenic 50.0%
! GCTATCCTTAGCATGGGCTA+CGG - chr3.2:80722098-80722117 MS.gene40925:CDS 50.0%
! TCCAGCTTGGCTCATCGATT+TGG - chr3.2:80724109-80724128 MS.gene40925:CDS 50.0%
! TCTGGGATTTCTTGGAGCAG+TGG - chr3.2:80724367-80724386 MS.gene40925:intron 50.0%
! TGCATGGGCTATGCTGCATT+TGG - chr3.2:80724041-80724060 MS.gene40925:CDS 50.0%
! TGGGGTGCTATCCTTAGCAT+GGG - chr3.2:80722092-80722111 MS.gene40925:CDS 50.0%
!! ACCTTCAAGGGTACTCTCAC+TGG - chr3.2:80723714-80723733 MS.gene40925:intron 50.0%
!! ACGGCACAATTGGGTTGGAT+TGG - chr3.2:80722117-80722136 MS.gene40925:CDS 50.0%
!! GCACAATTGGGTTGGATTGG+TGG - chr3.2:80722120-80722139 MS.gene40925:CDS 50.0%
!! TCCAGTGAGAGTACCCTTGA+AGG + chr3.2:80723718-80723737 None:intergenic 50.0%
!! TCCCACAAGGTGGATTACGA+CGG + chr3.2:80724144-80724163 None:intergenic 50.0%
!! TTCAAGGGTACTCTCACTGG+AGG - chr3.2:80723717-80723736 MS.gene40925:intron 50.0%
CGTTGTGGAGATCCTGTGCA+TGG - chr3.2:80722210-80722229 MS.gene40925:CDS 55.0%
CTTGGTATGCTCCCACAAGG+TGG + chr3.2:80724154-80724173 None:intergenic 55.0%
GCCAAATCGATGAGCCAAGC+TGG + chr3.2:80724113-80724132 None:intergenic 55.0%
GCCGTCGTAATCCACCTTGT+GGG - chr3.2:80724140-80724159 MS.gene40925:CDS 55.0%
TGCCGTCGTAATCCACCTTG+TGG - chr3.2:80724139-80724158 MS.gene40925:CDS 55.0%
TTGTGCCGTAGCCCATGCTA+AGG + chr3.2:80722106-80722125 None:intergenic 55.0%
! AGCATGGGCTACGGCACAAT+TGG - chr3.2:80722107-80722126 MS.gene40925:CDS 55.0%
! CTGGGGTGCTATCCTTAGCA+TGG - chr3.2:80722091-80722110 MS.gene40925:CDS 55.0%
! GCATGGGCTACGGCACAATT+GGG - chr3.2:80722108-80722127 MS.gene40925:CDS 55.0%
!! GGGTTGGATTGGTGGTCCTT+TGG - chr3.2:80722128-80722147 MS.gene40925:CDS 55.0%
GGGCGCCAATACACGGTTTG+TGG - chr3.2:80722568-80722587 MS.gene40925:intron 60.0%
GGGCTACGGCACAATTGGGT+TGG - chr3.2:80722112-80722131 MS.gene40925:CDS 60.0%
! GCACCAGGGAACTTGCTCAC+TGG - chr3.2:80724071-80724090 MS.gene40925:CDS 60.0%
TGCAGGCGGGCGCCAATACA+CGG - chr3.2:80722561-80722580 MS.gene40925:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 80721660 80724589 80721660 ID=MS.gene40925
chr3.2 mRNA 80721660 80724589 80721660 ID=MS.gene40925.t1;Parent=MS.gene40925
chr3.2 exon 80724484 80724589 80724484 ID=MS.gene40925.t1.exon1;Parent=MS.gene40925.t1
chr3.2 CDS 80724484 80724589 80724484 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
chr3.2 exon 80723973 80724206 80723973 ID=MS.gene40925.t1.exon2;Parent=MS.gene40925.t1
chr3.2 CDS 80723973 80724206 80723973 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
chr3.2 exon 80723590 80723683 80723590 ID=MS.gene40925.t1.exon3;Parent=MS.gene40925.t1
chr3.2 CDS 80723590 80723683 80723590 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
chr3.2 exon 80722842 80723056 80722842 ID=MS.gene40925.t1.exon4;Parent=MS.gene40925.t1
chr3.2 CDS 80722842 80723056 80722842 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
chr3.2 exon 80722404 80722543 80722404 ID=MS.gene40925.t1.exon5;Parent=MS.gene40925.t1
chr3.2 CDS 80722404 80722543 80722404 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
chr3.2 exon 80721660 80722304 80721660 ID=MS.gene40925.t1.exon6;Parent=MS.gene40925.t1
chr3.2 CDS 80721660 80722304 80721660 ID=cds.MS.gene40925.t1;Parent=MS.gene40925.t1
Gene Sequence

>MS.gene40925

ATGTTGAAAGAAGAAATAGAAAGAAACCGGAGCCATTCCATAGATGGTGTCCCTTCAGAACTTGATCCTGAATACTTCGACGACGATGGTCGTCCTAAACGAACAGGTACACATTAATTCATTTCATTATATAATTTTACGTTAAATGGTATTTTTTGATTGCATATTTGATGATATGTAAATGAGTTTGTATGTAATGACGCACAAATGAGTTTAATGTGAATTTCACAAGTTTACATTTGGTGTCGATCTTTTGTCTTCTTGGATAATGTAACAAATATCAAATAGAGATGAATTTCAATTTTTTTATGTCTAATTTTTATGGGAAAATTATCCCTCCTAGTAATGAAAATTTAACACATTTTTTTTTTGTTATGAGACAGGAACAATATGGACAACAAGTTCTCATATAATAACAGCTGTGATTGGGTCTGGGGTGCTATCCTTAGCATGGGCTACGGCACAATTGGGTTGGATTGGTGGTCCTTTGGTGATGATCCTTTTCAGCCTCGTCACTTTGTATACTTCATCAATGCTAGCTGAATGTTATCGTTGTGGAGATCCTGTGCATGGAAAGAGAAGCTATACTTTTGTGGATGCAGTTCGTAGCATTCTTGGTAACTTATATTGACTTACACGTTAATCAACACATACTTTCCCATGCTCTTAAATACAAGCAAAAAGTCAAGTGTATTTGTTTCAAATGTAGAACAAAATGTGTTTGTATTTAAGATCGGAATGAGTATTATTAAACATCAATATCATGTCACAACATGCATGCAAAGCATGTATATTATTTTTTGGTGAAAATGCAATGCATGTATCTAAAAGAGTGTTGTTGATGTAATATTCTTAAGAGTTGGTCACATTCTATAATAACATTATAGTTTCAAACATAATTTGCAGGCGGGCGCCAATACACGGTTTGTGGAATAGTTCAGTACTTGTATCTTTATGGCAGTGCAATAGGATACTCGATTGCAGCTCCCATTAGCATGATGTGAGTTGATTAACCATACCGTAATTATCTTTTACAAGCATTACTCGTTGTATTTTGTTTGAGTAAAAAAAAAAAAGAGTTTATAGAATGTAAAATGAACGATTAAAGAGAGATTTTTTTTATTTTTTTTTATCAAAAAACAAAGAGAGAATATTTAAGATTTTTTTTTTGAGTTAAATAAGATATATTAATTACCATTAGTGGGTCTTTAGAACAACTGAACAATCTTGTTAGAAAAATAATTGATTAATCAATTAATTTGTGAAAATTTTAATATTATTATGAAAATTTGAGAAATTTAAACAAATAAAAAGACATTGAAGAACATAAGTATAACCTAAAAAGAAGGATTGATATTGTTAAAAAAAAAAAAAAAAAAACCATTGATGGATCAAAAATATGTCTAGTTGAAATTAGATCAATCAAAAGTAAAATTAAGCCAAAATACCTATTAGCATTTGTCTTACTTCTATTATTGATAGGGTTAGCTAACTAGATTATTGTTGATGAGTTTATTTTAATTTGGGTGACAGGGAAATAAACAAGTCTAGATGTCTCCATTTATCAGGAGGAAAAGATCCATGTCACATGTCAAGCAACCCATACATGATCAGTTTTGGAGTAATCGAAATTTTCGTTTCTCAAATTCCAGAGTTTCATAATACGTGGTGGCTCTCAGTAATAGCTGCAATAATGTCTTTTGGCTATTCCACAGTTGGCGTCTTTTTAGCAATTTCCCAAACAGCAGGTTATCGTCGTTTTATTTTATAGAAACTAAAGATGAAACATTCGTATTTTTATAAAGACTTCAGATATATTGAACATTTAATCAAACAATTGTACTCAAGTGGTTATTGAAATTCACCAAATTTAGAGAACCAAGTTCTACTTTTGGATGTAATAATTCTTGATCATGTACTTTACGGTAACTCGAACGAACTCAGGACTATAGTCCTTTCCCCAAAAAACGAGACTGTTAACACAAAAAAAAAAAAAAATTAATTCGGGGATTATACTTTTTGTTTTGCTAACTGATTTTTAAACAGAAAATGGTACCTTCAAGGGTACTCTCACTGGAGGAAGCACTGAAGATGTGTCAACAACAACAAAATTGTGGGGAATTTTTCAAGCTCTTGGTGACATAGCCTTTGCTTATTCATACTCTCAAATTCTCATTGAAATTCAGGTATATATAATTATATGCCCTTTCTTTATCTTAATTAAAATTAAGAAAAACAACAGAATTTTGTGACAGAAACTAAATATATATTTTTACTACACACAGGACACTATAAAAAGTCCACCATCCGAAATAAAAACGATGAAGAATGCAGCAGCTTTAAGTGTTGCTGTCACTACAGCATTTTATTTGCTTTGTGGCTGCATGGGCTATGCTGCATTTGGAGAACAAGCACCAGGGAACTTGCTCACTGGATTTAGTATGTACAATCCAGCTTGGCTCATCGATTTGGCGAATGCTGCCGTCGTAATCCACCTTGTGGGAGCATACCAAGTATATGTTCAACCTGTCTTTGCCTTCGTAGAGAAAGGAGCAGCAAAAAGATGGCCCCAAACAAAAGTGGAACACAAAATTCCAATCCCGGGTTTTCGTCCTTACAATCTAAATCTATTTAGATTAGTTTGGAGAACAGTATTTATGATCCTAACTACTTTTGTTGCAATGTTGATTCCTTTCTTTAATGATGTTCTGGGATTTCTTGGAGCAGTGGGATTTTGGCCTTTAACAGTTTATTATCCAGTGGAGATGTATATCTTGCAAAGGAAGATCCCAAAATGGAGTTCTAAATGGATTTTGTTGGAAATCATAAGTGTTATATGCTTTATTGTATCAGTTGTGGCTGCTCTTGGCTCAACCGCCAGTATTATAGAGGACCTAAAGCATTACAAGCCATTCAGCTCAGAGTATTGA
Protein sequence

>MS.gene40925.t1

MLKEEIERNRSHSIDGVPSELDPEYFDDDGRPKRTGTIWTTSSHIITAVIGSGVLSLAWATAQLGWIGGPLVMILFSLVTLYTSSMLAECYRCGDPVHGKRSYTFVDAVRSILGGRQYTVCGIVQYLYLYGSAIGYSIAAPISMMEINKSRCLHLSGGKDPCHMSSNPYMISFGVIEIFVSQIPEFHNTWWLSVIAAIMSFGYSTVGVFLAISQTAENGTFKGTLTGGSTEDVSTTTKLWGIFQALGDIAFAYSYSQILIEIQDTIKSPPSEIKTMKNAAALSVAVTTAFYLLCGCMGYAAFGEQAPGNLLTGFSMYNPAWLIDLANAAVVIHLVGAYQVYVQPVFAFVEKGAAKRWPQTKVEHKIPIPGFRPYNLNLFRLVWRTVFMILTTFVAMLIPFFNDVLGFLGAVGFWPLTVYYPVEMYILQRKIPKWSSKWILLEIISVICFIVSVVAALGSTASIIEDLKHYKPFSSEY