Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049262.t1 | XP_003602666.1 | 95.6 | 477 | 21 | 0 | 1 | 477 | 1 | 477 | 1.70E-264 | 921.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049262.t1 | Q39134 | 65.3 | 464 | 158 | 1 | 17 | 477 | 13 | 476 | 2.4e-182 | 639.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049262.t1 | G7JC68 | 95.6 | 477 | 21 | 0 | 1 | 477 | 1 | 477 | 1.2e-264 | 921.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049262 | MS.gene055056 | 0.807078 | 6.02E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene058515 | 0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene049262 | MS.gene059276 | 0.823432 | 1.39E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene06269 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene06365 | 0.901218 | 3.35E-78 | -1.69E-46 |
| MS.gene049262 | MS.gene063846 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene064718 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene066752 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene049262 | MS.gene068308 | 0.828295 | 9.74E-55 | -1.69E-46 |
| MS.gene049262 | MS.gene069057 | 0.810749 | 9.87E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene069271 | 0.824213 | 9.12E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene069275 | 0.825254 | 5.18E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene070466 | 0.820538 | 6.50E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene070467 | 0.827733 | 1.33E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene071330 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene049262 | MS.gene072915 | 0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene09504 | 0.826359 | 2.83E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene20657 | 0.813492 | 2.49E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene24211 | 0.824351 | 8.46E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene26056 | 0.824559 | 7.56E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene28203 | 0.813572 | 2.39E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene29008 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene30073 | 0.830735 | 2.48E-55 | -1.69E-46 |
| MS.gene049262 | MS.gene30580 | 0.840902 | 6.57E-58 | -1.69E-46 |
| MS.gene049262 | MS.gene32747 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene34615 | 0.82949 | 5.00E-55 | -1.69E-46 |
| MS.gene049262 | MS.gene38429 | 0.819738 | 9.92E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene38444 | 0.810137 | 1.34E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene38850 | 0.833374 | 5.53E-56 | -1.69E-46 |
| MS.gene049262 | MS.gene40925 | 0.899 | 3.05E-77 | -1.69E-46 |
| MS.gene049262 | MS.gene41990 | 0.820592 | 6.32E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene42887 | 0.818255 | 2.16E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene42891 | 0.817126 | 3.88E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene45794 | 0.823817 | 1.13E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene47552 | 0.810253 | 1.26E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene48858 | 0.835833 | 1.33E-56 | -1.69E-46 |
| MS.gene049262 | MS.gene51189 | 0.817549 | 3.11E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene51252 | 0.809047 | 2.29E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene54921 | 0.840614 | 7.82E-58 | -1.69E-46 |
| MS.gene049262 | MS.gene56618 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene57103 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene59780 | 0.824344 | 8.49E-54 | -1.69E-46 |
| MS.gene049262 | MS.gene61742 | 0.834589 | 2.75E-56 | -1.69E-46 |
| MS.gene049262 | MS.gene61898 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene62748 | 0.821606 | 3.69E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene63142 | 0.804225 | 2.39E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene65003 | 0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene66192 | 0.818857 | 1.57E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene67182 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene049262 | MS.gene67266 | 0.822584 | 2.19E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene72205 | 0.819878 | 9.22E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene73540 | 0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene76954 | 0.816 | 6.93E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene77862 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene77863 | 0.807338 | 5.31E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene78647 | 0.839865 | 1.23E-57 | -1.69E-46 |
| MS.gene049262 | MS.gene79824 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene82682 | 0.813929 | 2.00E-51 | -1.69E-46 |
| MS.gene049262 | MS.gene82962 | 0.818436 | 1.96E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene84001 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene84968 | 0.821423 | 4.07E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene85361 | 0.809637 | 1.71E-50 | -1.69E-46 |
| MS.gene049262 | MS.gene85436 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene88533 | 0.823443 | 1.38E-53 | -1.69E-46 |
| MS.gene049262 | MS.gene88539 | 0.840033 | 1.11E-57 | -1.69E-46 |
| MS.gene049262 | MS.gene88548 | 0.817187 | 3.76E-52 | -1.69E-46 |
| MS.gene049262 | MS.gene91451 | 0.840685 | 7.49E-58 | -1.69E-46 |
| MS.gene049262 | MS.gene92276 | 0.804555 | 2.04E-49 | -1.69E-46 |
| MS.gene049262 | MS.gene98550 | 0.836233 | 1.06E-56 | -1.69E-46 |
| MS.gene049262 | MS.gene98673 | 0.816499 | 5.36E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049262.t1 | MTR_3g096800 | 95.597 | 477 | 21 | 0 | 1 | 477 | 1 | 477 | 0.0 | 946 |
| MS.gene049262.t1 | MTR_3g096830 | 71.767 | 464 | 129 | 1 | 11 | 474 | 4 | 465 | 0.0 | 674 |
| MS.gene049262.t1 | MTR_3g096840 | 65.208 | 480 | 161 | 1 | 1 | 474 | 1 | 480 | 0.0 | 661 |
| MS.gene049262.t1 | MTR_3g088455 | 63.410 | 481 | 170 | 3 | 1 | 477 | 1 | 479 | 0.0 | 651 |
| MS.gene049262.t1 | MTR_8g094290 | 67.406 | 451 | 147 | 0 | 27 | 477 | 25 | 475 | 0.0 | 650 |
| MS.gene049262.t1 | MTR_3g088475 | 62.656 | 482 | 173 | 4 | 1 | 477 | 1 | 480 | 0.0 | 634 |
| MS.gene049262.t1 | MTR_4g073520 | 59.588 | 485 | 184 | 3 | 5 | 477 | 28 | 512 | 0.0 | 617 |
| MS.gene049262.t1 | MTR_4g073520 | 59.588 | 485 | 184 | 3 | 5 | 477 | 28 | 512 | 0.0 | 616 |
| MS.gene049262.t1 | MTR_1g029750 | 61.458 | 480 | 178 | 3 | 5 | 477 | 4 | 483 | 0.0 | 605 |
| MS.gene049262.t1 | MTR_1g007380 | 52.575 | 466 | 214 | 4 | 18 | 476 | 6 | 471 | 0.0 | 530 |
| MS.gene049262.t1 | MTR_3g110660 | 51.245 | 482 | 228 | 5 | 1 | 476 | 1 | 481 | 0.0 | 527 |
| MS.gene049262.t1 | MTR_1g105980 | 53.247 | 462 | 211 | 2 | 20 | 476 | 9 | 470 | 0.0 | 522 |
| MS.gene049262.t1 | MTR_3g088465 | 62.953 | 386 | 136 | 4 | 1 | 381 | 1 | 384 | 2.27e-176 | 501 |
| MS.gene049262.t1 | MTR_1g105995 | 51.957 | 460 | 216 | 3 | 20 | 474 | 8 | 467 | 4.71e-175 | 500 |
| MS.gene049262.t1 | MTR_1g105990 | 52.298 | 457 | 210 | 3 | 20 | 468 | 8 | 464 | 8.68e-174 | 496 |
| MS.gene049262.t1 | MTR_1g106000 | 50.218 | 458 | 214 | 4 | 33 | 476 | 15 | 472 | 4.73e-169 | 484 |
| MS.gene049262.t1 | MTR_1g007270 | 47.589 | 477 | 240 | 4 | 1 | 474 | 1 | 470 | 3.18e-164 | 472 |
| MS.gene049262.t1 | MTR_3g461440 | 49.550 | 444 | 219 | 2 | 26 | 466 | 16 | 457 | 1.49e-163 | 470 |
| MS.gene049262.t1 | MTR_3g461470 | 49.550 | 444 | 219 | 2 | 26 | 466 | 16 | 457 | 1.19e-161 | 466 |
| MS.gene049262.t1 | MTR_3g061390 | 49.550 | 444 | 219 | 2 | 26 | 466 | 16 | 457 | 1.43e-159 | 460 |
| MS.gene049262.t1 | MTR_3g110420 | 47.598 | 458 | 227 | 5 | 24 | 473 | 15 | 467 | 4.36e-155 | 449 |
| MS.gene049262.t1 | MTR_5g096840 | 45.629 | 469 | 246 | 4 | 2 | 466 | 1 | 464 | 1.43e-153 | 445 |
| MS.gene049262.t1 | MTR_3g461430 | 48.055 | 437 | 222 | 2 | 30 | 463 | 27 | 461 | 1.77e-153 | 446 |
| MS.gene049262.t1 | MTR_3g461480 | 48.043 | 460 | 233 | 3 | 10 | 465 | 4 | 461 | 3.28e-149 | 434 |
| MS.gene049262.t1 | MTR_1g007240 | 46.374 | 455 | 231 | 5 | 27 | 474 | 6 | 454 | 5.66e-147 | 428 |
| MS.gene049262.t1 | MTR_1g007180 | 44.835 | 455 | 238 | 5 | 27 | 474 | 6 | 454 | 6.25e-147 | 428 |
| MS.gene049262.t1 | MTR_2g031750 | 45.197 | 458 | 243 | 5 | 21 | 474 | 1 | 454 | 1.96e-145 | 424 |
| MS.gene049262.t1 | MTR_3g110430 | 46.072 | 471 | 247 | 4 | 9 | 473 | 33 | 502 | 1.21e-140 | 414 |
| MS.gene049262.t1 | MTR_3g110660 | 54.519 | 343 | 152 | 4 | 1 | 340 | 1 | 342 | 1.62e-132 | 388 |
| MS.gene049262.t1 | MTR_5g096850 | 44.292 | 438 | 238 | 4 | 33 | 466 | 25 | 460 | 9.82e-129 | 382 |
| MS.gene049262.t1 | MTR_3g461440 | 48.910 | 321 | 159 | 2 | 149 | 466 | 2 | 320 | 5.45e-114 | 339 |
| MS.gene049262.t1 | MTR_2g031750 | 43.229 | 384 | 211 | 4 | 95 | 474 | 7 | 387 | 2.85e-112 | 337 |
| MS.gene049262.t1 | MTR_3g110420 | 47.516 | 322 | 160 | 3 | 24 | 340 | 15 | 332 | 4.21e-103 | 311 |
| MS.gene049262.t1 | MTR_5g017200 | 63.415 | 246 | 79 | 3 | 27 | 272 | 26 | 260 | 3.16e-98 | 296 |
| MS.gene049262.t1 | MTR_1g007180 | 41.584 | 303 | 170 | 4 | 176 | 474 | 71 | 370 | 1.12e-81 | 258 |
| MS.gene049262.t1 | MTR_6g022790 | 29.801 | 453 | 268 | 10 | 33 | 474 | 42 | 455 | 8.23e-49 | 174 |
| MS.gene049262.t1 | MTR_1g007190 | 43.439 | 221 | 88 | 4 | 43 | 263 | 20 | 203 | 6.67e-48 | 164 |
| MS.gene049262.t1 | MTR_2g101920 | 29.464 | 448 | 263 | 11 | 4 | 438 | 18 | 425 | 8.82e-48 | 171 |
| MS.gene049262.t1 | MTR_5g054730 | 32.334 | 467 | 254 | 16 | 20 | 470 | 15 | 435 | 4.04e-46 | 166 |
| MS.gene049262.t1 | MTR_8g080120 | 28.728 | 456 | 282 | 12 | 28 | 474 | 15 | 436 | 3.15e-45 | 164 |
| MS.gene049262.t1 | MTR_1g070470 | 27.313 | 454 | 291 | 13 | 27 | 473 | 16 | 437 | 1.37e-44 | 162 |
| MS.gene049262.t1 | MTR_4g103890 | 28.728 | 456 | 261 | 14 | 34 | 471 | 11 | 420 | 2.00e-43 | 159 |
| MS.gene049262.t1 | MTR_1g093020 | 30.238 | 463 | 286 | 11 | 13 | 470 | 3 | 433 | 4.98e-42 | 155 |
| MS.gene049262.t1 | MTR_1g093020 | 30.947 | 433 | 262 | 11 | 13 | 440 | 3 | 403 | 1.99e-41 | 153 |
| MS.gene049262.t1 | MTR_6g022780 | 29.490 | 451 | 271 | 10 | 34 | 474 | 15 | 428 | 3.12e-40 | 150 |
| MS.gene049262.t1 | MTR_6g023075 | 29.310 | 464 | 278 | 11 | 24 | 474 | 2 | 428 | 1.54e-39 | 148 |
| MS.gene049262.t1 | MTR_7g038910 | 28.664 | 464 | 294 | 10 | 17 | 474 | 11 | 443 | 1.59e-39 | 148 |
| MS.gene049262.t1 | MTR_1g093030 | 28.665 | 457 | 268 | 10 | 29 | 470 | 20 | 433 | 7.87e-39 | 146 |
| MS.gene049262.t1 | MTR_7g038910 | 28.497 | 386 | 239 | 10 | 17 | 396 | 11 | 365 | 5.95e-38 | 143 |
| MS.gene049262.t1 | MTR_4g055610 | 27.004 | 474 | 284 | 14 | 27 | 475 | 25 | 461 | 3.85e-37 | 142 |
| MS.gene049262.t1 | MTR_7g038910 | 29.769 | 346 | 220 | 8 | 17 | 356 | 11 | 339 | 7.94e-37 | 139 |
| MS.gene049262.t1 | MTR_3g005740 | 29.754 | 447 | 278 | 10 | 34 | 474 | 53 | 469 | 1.81e-36 | 140 |
| MS.gene049262.t1 | MTR_2g096830 | 28.913 | 460 | 285 | 10 | 24 | 474 | 2 | 428 | 7.19e-36 | 138 |
| MS.gene049262.t1 | MTR_6g023065 | 27.500 | 480 | 306 | 13 | 3 | 474 | 18 | 463 | 9.04e-36 | 138 |
| MS.gene049262.t1 | MTR_8g099320 | 26.294 | 483 | 305 | 17 | 7 | 476 | 6 | 450 | 3.06e-33 | 131 |
| MS.gene049262.t1 | MTR_3g085820 | 27.000 | 400 | 253 | 11 | 4 | 398 | 5 | 370 | 1.66e-32 | 128 |
| MS.gene049262.t1 | MTR_1g492640 | 26.966 | 445 | 280 | 16 | 44 | 476 | 70 | 481 | 1.73e-32 | 129 |
| MS.gene049262.t1 | MTR_2g096830 | 29.674 | 337 | 208 | 9 | 24 | 351 | 2 | 318 | 1.70e-31 | 124 |
| MS.gene049262.t1 | MTR_4g075750 | 24.335 | 489 | 311 | 15 | 11 | 472 | 45 | 501 | 2.79e-29 | 120 |
| MS.gene049262.t1 | MTR_0531s0020 | 30.247 | 324 | 200 | 9 | 33 | 350 | 49 | 352 | 5.99e-29 | 117 |
| MS.gene049262.t1 | MTR_3g115090 | 25.216 | 464 | 282 | 14 | 27 | 464 | 75 | 499 | 2.11e-28 | 118 |
| MS.gene049262.t1 | MTR_5g081630 | 25.962 | 416 | 267 | 14 | 64 | 475 | 4 | 382 | 7.05e-23 | 100 |
| MS.gene049262.t1 | MTR_5g023260 | 23.810 | 462 | 306 | 12 | 19 | 465 | 93 | 523 | 9.62e-23 | 101 |
| MS.gene049262.t1 | MTR_1g492640 | 26.913 | 379 | 233 | 15 | 110 | 476 | 3 | 349 | 8.00e-22 | 97.1 |
| MS.gene049262.t1 | MTR_5g023240 | 23.341 | 437 | 286 | 12 | 20 | 440 | 73 | 476 | 7.95e-21 | 95.5 |
| MS.gene049262.t1 | MTR_1g492640 | 27.476 | 313 | 197 | 13 | 44 | 346 | 52 | 344 | 1.15e-20 | 93.6 |
| MS.gene049262.t1 | MTR_1g492640 | 27.476 | 313 | 197 | 13 | 44 | 346 | 70 | 362 | 1.41e-20 | 93.6 |
| MS.gene049262.t1 | MTR_2g012470 | 24.375 | 480 | 296 | 17 | 19 | 472 | 81 | 519 | 1.24e-17 | 85.9 |
| MS.gene049262.t1 | MTR_4g104510 | 23.239 | 426 | 264 | 15 | 64 | 475 | 71 | 447 | 8.56e-16 | 79.7 |
| MS.gene049262.t1 | MTR_4g104510 | 22.353 | 425 | 271 | 12 | 64 | 475 | 71 | 449 | 2.93e-15 | 78.2 |
| MS.gene049262.t1 | MTR_3g069960 | 24.059 | 478 | 290 | 18 | 22 | 475 | 7 | 435 | 1.18e-14 | 76.3 |
| MS.gene049262.t1 | MTR_3g069960 | 23.529 | 408 | 257 | 15 | 79 | 475 | 19 | 382 | 1.61e-13 | 72.4 |
| MS.gene049262.t1 | MTR_1g492640 | 27.485 | 171 | 110 | 6 | 44 | 212 | 70 | 228 | 3.11e-11 | 64.3 |
| MS.gene049262.t1 | MTR_1g492640 | 27.485 | 171 | 110 | 6 | 44 | 212 | 52 | 210 | 3.13e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049262.t1 | AT5G09220 | 64.606 | 469 | 162 | 2 | 13 | 477 | 25 | 493 | 0.0 | 654 |
| MS.gene049262.t1 | AT1G77380 | 65.302 | 464 | 158 | 1 | 17 | 477 | 13 | 476 | 0.0 | 647 |
| MS.gene049262.t1 | AT5G63850 | 64.693 | 456 | 157 | 2 | 26 | 477 | 11 | 466 | 0.0 | 638 |
| MS.gene049262.t1 | AT1G44100 | 58.947 | 475 | 185 | 4 | 12 | 477 | 7 | 480 | 0.0 | 608 |
| MS.gene049262.t1 | AT5G49630 | 56.798 | 456 | 191 | 4 | 26 | 475 | 25 | 480 | 0.0 | 528 |
| MS.gene049262.t1 | AT1G10010 | 53.642 | 453 | 206 | 2 | 27 | 475 | 22 | 474 | 0.0 | 526 |
| MS.gene049262.t1 | AT1G10010 | 53.642 | 453 | 206 | 2 | 27 | 475 | 21 | 473 | 0.0 | 525 |
| MS.gene049262.t1 | AT1G58360 | 52.928 | 461 | 212 | 3 | 22 | 477 | 24 | 484 | 0.0 | 522 |
| MS.gene049262.t1 | AT5G23810 | 47.748 | 444 | 216 | 6 | 7 | 442 | 5 | 440 | 8.66e-136 | 400 |
| MS.gene049262.t1 | AT5G23810 | 48.538 | 342 | 165 | 5 | 7 | 345 | 5 | 338 | 1.21e-100 | 306 |
| MS.gene049262.t1 | AT5G23810 | 46.586 | 249 | 124 | 4 | 18 | 263 | 14 | 256 | 3.69e-67 | 216 |
| MS.gene049262.t1 | AT5G23810 | 45.972 | 211 | 105 | 4 | 7 | 214 | 5 | 209 | 4.02e-53 | 179 |
| MS.gene049262.t1 | AT5G23810 | 45.972 | 211 | 105 | 4 | 7 | 214 | 5 | 209 | 4.02e-53 | 179 |
| MS.gene049262.t1 | AT1G48640 | 29.325 | 474 | 294 | 12 | 7 | 474 | 15 | 453 | 3.32e-47 | 169 |
| MS.gene049262.t1 | AT5G40780 | 29.663 | 445 | 277 | 10 | 34 | 474 | 34 | 446 | 3.36e-46 | 167 |
| MS.gene049262.t1 | AT1G67640 | 29.736 | 454 | 280 | 11 | 28 | 474 | 20 | 441 | 1.30e-42 | 157 |
| MS.gene049262.t1 | AT5G40780 | 29.535 | 430 | 267 | 10 | 49 | 474 | 1 | 398 | 2.57e-42 | 155 |
| MS.gene049262.t1 | AT5G40780 | 29.535 | 430 | 267 | 10 | 49 | 474 | 1 | 398 | 2.57e-42 | 155 |
| MS.gene049262.t1 | AT1G61270 | 27.193 | 456 | 293 | 12 | 22 | 469 | 19 | 443 | 5.00e-41 | 152 |
| MS.gene049262.t1 | AT1G24400 | 28.510 | 463 | 274 | 15 | 28 | 474 | 20 | 441 | 1.05e-40 | 151 |
| MS.gene049262.t1 | AT3G01760 | 25.214 | 468 | 306 | 11 | 16 | 468 | 3 | 441 | 5.46e-40 | 150 |
| MS.gene049262.t1 | AT1G25530 | 28.477 | 453 | 270 | 11 | 32 | 471 | 26 | 437 | 3.05e-36 | 139 |
| MS.gene049262.t1 | AT1G71680 | 27.423 | 485 | 291 | 14 | 7 | 474 | 8 | 448 | 1.13e-34 | 135 |
| MS.gene049262.t1 | AT1G08230 | 29.231 | 455 | 279 | 14 | 33 | 475 | 27 | 450 | 1.36e-32 | 129 |
| MS.gene049262.t1 | AT1G71680 | 28.453 | 362 | 212 | 12 | 7 | 351 | 8 | 339 | 3.31e-30 | 121 |
| MS.gene049262.t1 | AT5G41800 | 25.000 | 456 | 298 | 12 | 33 | 476 | 26 | 449 | 1.97e-25 | 108 |
| MS.gene049262.t1 | AT1G08230 | 30.745 | 322 | 193 | 9 | 163 | 475 | 31 | 331 | 2.22e-24 | 103 |
| MS.gene049262.t1 | AT1G08230 | 30.745 | 322 | 193 | 9 | 163 | 475 | 31 | 331 | 2.22e-24 | 103 |
| MS.gene049262.t1 | AT1G08230 | 30.745 | 322 | 193 | 9 | 163 | 475 | 31 | 331 | 2.22e-24 | 103 |
| MS.gene049262.t1 | AT1G08230 | 30.745 | 322 | 193 | 9 | 163 | 475 | 50 | 350 | 2.63e-24 | 104 |
| MS.gene049262.t1 | AT2G39890 | 24.519 | 416 | 273 | 14 | 64 | 475 | 63 | 441 | 1.99e-21 | 97.1 |
| MS.gene049262.t1 | AT2G39890 | 24.519 | 416 | 273 | 14 | 64 | 475 | 63 | 441 | 1.99e-21 | 97.1 |
| MS.gene049262.t1 | AT2G39890 | 24.519 | 416 | 273 | 14 | 64 | 475 | 4 | 382 | 2.71e-21 | 95.9 |
| MS.gene049262.t1 | AT2G36590 | 24.632 | 475 | 309 | 17 | 9 | 475 | 2 | 435 | 5.52e-21 | 95.5 |
| MS.gene049262.t1 | AT3G55740 | 24.940 | 417 | 270 | 13 | 64 | 475 | 60 | 438 | 9.20e-21 | 95.1 |
| MS.gene049262.t1 | AT3G55740 | 25.120 | 418 | 268 | 14 | 64 | 475 | 4 | 382 | 9.95e-21 | 94.4 |
| MS.gene049262.t1 | AT3G55740 | 25.120 | 418 | 268 | 14 | 64 | 475 | 4 | 382 | 9.95e-21 | 94.4 |
| MS.gene049262.t1 | AT1G47670 | 24.895 | 474 | 301 | 15 | 19 | 472 | 79 | 517 | 5.96e-18 | 87.0 |
| MS.gene049262.t1 | AT4G35180 | 23.529 | 459 | 292 | 13 | 34 | 473 | 58 | 476 | 4.21e-16 | 80.9 |
| MS.gene049262.t1 | AT4G35180 | 25.969 | 258 | 171 | 5 | 33 | 286 | 57 | 298 | 4.21e-13 | 70.9 |
| MS.gene049262.t1 | AT2G36590 | 24.332 | 337 | 224 | 12 | 9 | 340 | 2 | 312 | 8.53e-12 | 66.6 |
Find 113 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCATTTAGAACTCCATTT+TGG | 0.108522 | 3.3:-80072842 | None:intergenic |
| GTTCAGTACTTGTATCTTTA+TGG | 0.129160 | 3.3:+80070939 | MS.gene049262:CDS |
| TCCTTTCTTTAATGATGTTC+TGG | 0.137749 | 3.3:+80072742 | MS.gene049262:CDS |
| TTCTTGGAGCAGTGGGATTT+TGG | 0.180772 | 3.3:+80072768 | MS.gene049262:CDS |
| AATGATGTTCTGGGATTTCT+TGG | 0.212555 | 3.3:+80072752 | MS.gene049262:CDS |
| ACTGGATAATAAACTGTTAA+AGG | 0.224075 | 3.3:-80072791 | None:intergenic |
| TCAAATTCTCATTGAAATTC+AGG | 0.231508 | 3.3:+80072217 | MS.gene049262:CDS |
| CCATCGTCGTCGAAGTATTC+AGG | 0.273974 | 3.3:-80070066 | None:intergenic |
| TAAATCTATTTAGATTAGTT+TGG | 0.281769 | 3.3:+80072675 | MS.gene049262:CDS |
| CCTTTCTTTAATGATGTTCT+GGG | 0.306108 | 3.3:+80072743 | MS.gene049262:CDS |
| TCCCAAAATGGAGTTCTAAA+TGG | 0.320619 | 3.3:+80072840 | MS.gene049262:CDS |
| TGAATGGCTTGTAATGCTTT+AGG | 0.330057 | 3.3:-80072946 | None:intergenic |
| TCCAGCTTGGCTCATCGATT+TGG | 0.332874 | 3.3:+80072502 | MS.gene049262:CDS |
| TATCTTTATGGCAGTGCAAT+AGG | 0.337033 | 3.3:+80070951 | MS.gene049262:CDS |
| ATAGCTGCAATAATGTCTTT+TGG | 0.346313 | 3.3:+80071730 | MS.gene049262:CDS |
| AGCATGGGCTACGGCACAAT+TGG | 0.349061 | 3.3:+80070449 | MS.gene049262:CDS |
| TCTAGATGTCTCCATTTATC+AGG | 0.357700 | 3.3:+80071595 | MS.gene049262:CDS |
| AACCCATACATGATCAGTTT+TGG | 0.359942 | 3.3:+80071646 | MS.gene049262:CDS |
| ATCAACTCACATCATGCTAA+TGG | 0.372993 | 3.3:-80070991 | None:intergenic |
| TTCTGAAGGGACACCATCTA+TGG | 0.373125 | 3.3:-80070037 | None:intergenic |
| AAGGACGATAACCTGCTGTT+TGG | 0.374036 | 3.3:-80071786 | None:intergenic |
| TAATGTGTACCTGTTCGTTT+AGG | 0.376426 | 3.3:-80070093 | None:intergenic |
| TGCATGGGCTATGCTGCATT+TGG | 0.377828 | 3.3:+80072434 | MS.gene049262:CDS |
| CTAAATAGATTTAGATTGTA+AGG | 0.384304 | 3.3:-80072665 | None:intergenic |
| GATGCAGTTCGTAGCATTCT+TGG | 0.385053 | 3.3:+80070597 | MS.gene049262:CDS |
| CATATAATAACAGCTGTGAT+TGG | 0.385307 | 3.3:+80070408 | MS.gene049262:CDS |
| GTATCAGTTGTGGCTGCTCT+TGG | 0.389248 | 3.3:+80072899 | MS.gene049262:CDS |
| CTTTAGGTCCTCTATAATAC+TGG | 0.396377 | 3.3:-80072930 | None:intergenic |
| GGGTTGGATTGGTGGTCCTT+TGG | 0.399149 | 3.3:+80070470 | MS.gene049262:CDS |
| ATAACAGCTGTGATTGGGTC+TGG | 0.401374 | 3.3:+80070414 | MS.gene049262:CDS |
| ACTCCAAAACTGATCATGTA+TGG | 0.410066 | 3.3:-80071649 | None:intergenic |
| CTGGGATTTCTTGGAGCAGT+GGG | 0.412618 | 3.3:+80072761 | MS.gene049262:CDS |
| TGCAAAGGAAGATCCCAAAA+TGG | 0.417168 | 3.3:+80072828 | MS.gene049262:CDS |
| AGGACGATAACCTGCTGTTT+GGG | 0.426888 | 3.3:-80071785 | None:intergenic |
| ACAAAGTGACGAGGCTGAAA+AGG | 0.428865 | 3.3:-80070500 | None:intergenic |
| TTATTTGCTTTGTGGCTGCA+TGG | 0.440989 | 3.3:+80072418 | MS.gene049262:CDS |
| ACCTTCAAGGGTACTCTCAC+TGG | 0.442148 | 3.3:+80072107 | MS.gene049262:CDS |
| AACAGAAAATGGTACCTTCA+AGG | 0.444400 | 3.3:+80072094 | MS.gene049262:intron |
| AACCGGAGCCATTCCATAGA+TGG | 0.448209 | 3.3:+80070024 | MS.gene049262:CDS |
| CTGGGGTGCTATCCTTAGCA+TGG | 0.450709 | 3.3:+80070433 | MS.gene049262:CDS |
| TCAACTCACATCATGCTAAT+GGG | 0.455025 | 3.3:-80070990 | None:intergenic |
| AAGAAGAAATAGAAAGAAAC+CGG | 0.458125 | 3.3:+80070007 | MS.gene049262:CDS |
| ACATTGCAACAAAAGTAGTT+AGG | 0.463138 | 3.3:-80072715 | None:intergenic |
| CTATTCCACAAACCGTGTAT+TGG | 0.465036 | 3.3:-80070917 | None:intergenic |
| GCATGGGCTACGGCACAATT+GGG | 0.465627 | 3.3:+80070450 | MS.gene049262:CDS |
| TCCAGTGAGAGTACCCTTGA+AGG | 0.465923 | 3.3:-80072108 | None:intergenic |
| GCACAATTGGGTTGGATTGG+TGG | 0.466018 | 3.3:+80070462 | MS.gene049262:CDS |
| TAAGGACGAAAACCCGGGAT+TGG | 0.471537 | 3.3:-80072647 | None:intergenic |
| GTCAACAACAACAAAATTGT+GGG | 0.475137 | 3.3:+80072148 | MS.gene049262:CDS |
| GCCAAATCGATGAGCCAAGC+TGG | 0.477067 | 3.3:-80072503 | None:intergenic |
| GGGCGCCAATACACGGTTTG+TGG | 0.479067 | 3.3:+80070912 | MS.gene049262:CDS |
| TATTTGCTTTGTGGCTGCAT+GGG | 0.481138 | 3.3:+80072419 | MS.gene049262:CDS |
| ATATAATAACAGCTGTGATT+GGG | 0.488499 | 3.3:+80070409 | MS.gene049262:CDS |
| GGGCTACGGCACAATTGGGT+TGG | 0.489975 | 3.3:+80070454 | MS.gene049262:CDS |
| GTTATGAGACAGGAACAATA+TGG | 0.494922 | 3.3:+80070373 | MS.gene049262:intron |
| GCCGTCGTAATCCACCTTGT+GGG | 0.501113 | 3.3:+80072533 | MS.gene049262:CDS |
| CCCAGAACATCATTAAAGAA+AGG | 0.503059 | 3.3:-80072743 | None:intergenic |
| GCACCAGGGAACTTGCTCAC+TGG | 0.503377 | 3.3:+80072464 | MS.gene049262:CDS |
| CTCAACCGCCAGTATTATAG+AGG | 0.511484 | 3.3:+80072922 | MS.gene049262:CDS |
| CGTTGTGGAGATCCTGTGTA+TGG | 0.511828 | 3.3:+80070552 | MS.gene049262:CDS |
| GATGGTCGTCCTAAACGAAC+AGG | 0.514219 | 3.3:+80070084 | MS.gene049262:CDS |
| TTAGCAATTTCCCAAACAGC+AGG | 0.515563 | 3.3:+80071775 | MS.gene049262:CDS |
| TAACAGCTGTGATTGGGTCT+GGG | 0.516920 | 3.3:+80070415 | MS.gene049262:CDS |
| ACAGAAAATGGTACCTTCAA+GGG | 0.518566 | 3.3:+80072095 | MS.gene049262:intron |
| TGTCAACAACAACAAAATTG+TGG | 0.522475 | 3.3:+80072147 | MS.gene049262:CDS |
| GATTGTAAGGACGAAAACCC+GGG | 0.523575 | 3.3:-80072652 | None:intergenic |
| TGCTGCTCCGTTCTCTACGA+AGG | 0.525473 | 3.3:-80072588 | None:intergenic |
| TTCTCTACGAAGGCAAAGAC+AGG | 0.527216 | 3.3:-80072578 | None:intergenic |
| ATGCTTCATTGTATCAGTTG+TGG | 0.528329 | 3.3:+80072889 | MS.gene049262:CDS |
| GGAACACAAAATTCCAATCC+CGG | 0.528501 | 3.3:+80072634 | MS.gene049262:CDS |
| GCATTTGGAGAACAAGCACC+AGG | 0.529176 | 3.3:+80072449 | MS.gene049262:CDS |
| CACCATCTATGGAATGGCTC+CGG | 0.534833 | 3.3:-80070026 | None:intergenic |
| GTCTTTGCCTTCGTAGAGAA+CGG | 0.535699 | 3.3:+80072581 | MS.gene049262:CDS |
| TGCCGTCGTAATCCACCTTG+TGG | 0.547983 | 3.3:+80072532 | MS.gene049262:CDS |
| ACGGCACAATTGGGTTGGAT+TGG | 0.551307 | 3.3:+80070459 | MS.gene049262:CDS |
| TATTCAGGATCAAGTTCTGA+AGG | 0.553591 | 3.3:-80070051 | None:intergenic |
| AAGATGGCCCCAAACAAAAG+TGG | 0.554048 | 3.3:+80072613 | MS.gene049262:CDS |
| GCTCAATACTCTGAGCTGAA+TGG | 0.555896 | 3.3:-80072962 | None:intergenic |
| AGACAGGTTGAACATATACT+TGG | 0.557340 | 3.3:-80072562 | None:intergenic |
| TGCAGGCGGGCGCCAATACA+CGG | 0.557733 | 3.3:+80070905 | MS.gene049262:intron |
| AGATTGTAAGGACGAAAACC+CGG | 0.560505 | 3.3:-80072653 | None:intergenic |
| CTCCAAAACTGATCATGTAT+GGG | 0.563692 | 3.3:-80071648 | None:intergenic |
| TCTGGGATTTCTTGGAGCAG+TGG | 0.566045 | 3.3:+80072760 | MS.gene049262:CDS |
| AATCCAGTGAGCAAGTTCCC+TGG | 0.566335 | 3.3:-80072467 | None:intergenic |
| TTTAACAGTTTATTATCCAG+TGG | 0.568524 | 3.3:+80072793 | MS.gene049262:CDS |
| TGCAAGATATACATCTCCAC+TGG | 0.575990 | 3.3:-80072809 | None:intergenic |
| TGGGGTGCTATCCTTAGCAT+GGG | 0.576138 | 3.3:+80070434 | MS.gene049262:CDS |
| TAGCTTCTCTTTCCATACAC+AGG | 0.582319 | 3.3:-80070564 | None:intergenic |
| TTAGTATGTACAATCCAGCT+TGG | 0.584076 | 3.3:+80072489 | MS.gene049262:CDS |
| AACAGCTGTGATTGGGTCTG+GGG | 0.588270 | 3.3:+80070416 | MS.gene049262:CDS |
| GAACACAAAATTCCAATCCC+GGG | 0.593016 | 3.3:+80072635 | MS.gene049262:CDS |
| AAGGGACACCATCTATGGAA+TGG | 0.597405 | 3.3:-80070032 | None:intergenic |
| CCTGAATACTTCGACGACGA+TGG | 0.603286 | 3.3:+80070066 | MS.gene049262:CDS |
| TTGTGCCGTAGCCCATGCTA+AGG | 0.606269 | 3.3:-80070445 | None:intergenic |
| TGGAGATGTATATCTTGCAA+AGG | 0.629124 | 3.3:+80072813 | MS.gene049262:CDS |
| TTGAGAGTATGAATAAGCAA+AGG | 0.634614 | 3.3:-80072198 | None:intergenic |
| AGATGTCTCCATTTATCAGG+AGG | 0.634869 | 3.3:+80071598 | MS.gene049262:CDS |
| TAGGTCCTCTATAATACTGG+CGG | 0.635831 | 3.3:-80072927 | None:intergenic |
| CTAGCTGAATGTTATCGTTG+TGG | 0.636182 | 3.3:+80070537 | MS.gene049262:CDS |
| TTCCAGAGTTTCATAATACG+TGG | 0.645176 | 3.3:+80071695 | MS.gene049262:CDS |
| CACCACGTATTATGAAACTC+TGG | 0.648752 | 3.3:-80071697 | None:intergenic |
| ATTCAGGATCAAGTTCTGAA+GGG | 0.648974 | 3.3:-80070050 | None:intergenic |
| TTCAAGGGTACTCTCACTGG+AGG | 0.649496 | 3.3:+80072110 | MS.gene049262:CDS |
| GGGTTGCTTGACATGTGACA+TGG | 0.650556 | 3.3:-80071628 | None:intergenic |
| CTGAAAAGGATCATCACCAA+AGG | 0.653603 | 3.3:-80070486 | None:intergenic |
| TCAACAACAACAAAATTGTG+GGG | 0.655949 | 3.3:+80072149 | MS.gene049262:CDS |
| GCTATCCTTAGCATGGGCTA+CGG | 0.662463 | 3.3:+80070440 | MS.gene049262:CDS |
| CAGAGTTTCATAATACGTGG+TGG | 0.670066 | 3.3:+80071698 | MS.gene049262:CDS |
| CTTGGTATGCTCCCACAAGG+TGG | 0.675365 | 3.3:-80072544 | None:intergenic |
| ATACTTGGTATGCTCCCACA+AGG | 0.692310 | 3.3:-80072547 | None:intergenic |
| ATGAAGTATACAAAGTGACG+AGG | 0.719582 | 3.3:-80070509 | None:intergenic |
| TCCCACAAGGTGGATTACGA+CGG | 0.722373 | 3.3:-80072534 | None:intergenic |
| CATTTGGAGAACAAGCACCA+GGG | 0.723647 | 3.3:+80072450 | MS.gene049262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAACATTTAATTC+GGG | + | chr3.3:80072038-80072057 | MS.gene049262:intron | 10.0% |
| !!! | ATTTTAATTAAGATAAAGAA+AGG | - | chr3.3:80072260-80072279 | None:intergenic | 10.0% |
| !!! | TTATATAATTTTACGTTAAA+TGG | + | chr3.3:80070126-80070145 | MS.gene049262:intron | 10.0% |
| !!! | TTTAATTTGAAATTGATTTT+GGG | + | chr3.3:80071553-80071572 | MS.gene049262:intron | 10.0% |
| !!! | TTTAGTTTCTATAAAATAAA+AGG | - | chr3.3:80071808-80071827 | None:intergenic | 10.0% |
| !!! | TTTTAATTAAGATAAAGAAA+GGG | - | chr3.3:80072259-80072278 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGAAATTGATTT+TGG | + | chr3.3:80071552-80071571 | MS.gene049262:intron | 10.0% |
| !!! | TTTTTATGTCTAATTTTTAT+GGG | + | chr3.3:80070303-80070322 | MS.gene049262:intron | 10.0% |
| !!! | TTTTTTATGTCTAATTTTTA+TGG | + | chr3.3:80070302-80070321 | MS.gene049262:intron | 10.0% |
| !! | AAAAAAAAAAAAACCATTGA+TGG | + | chr3.3:80071404-80071423 | MS.gene049262:intron | 15.0% |
| !! | AAAAAAAAACATTTAATTCG+GGG | + | chr3.3:80072039-80072058 | MS.gene049262:intron | 15.0% |
| !! | ATATATTAATTACCATTAGT+GGG | + | chr3.3:80071220-80071239 | MS.gene049262:intron | 15.0% |
| !!! | TAAATCTATTTAGATTAGTT+TGG | + | chr3.3:80072675-80072694 | MS.gene049262:CDS | 15.0% |
| !! | ATGCTTGTAAAAGATAATTA+CGG | - | chr3.3:80071025-80071044 | None:intergenic | 20.0% |
| !! | CTAAATAGATTTAGATTGTA+AGG | - | chr3.3:80072668-80072687 | None:intergenic | 20.0% |
| !! | GATATATTAATTACCATTAG+TGG | + | chr3.3:80071219-80071238 | MS.gene049262:intron | 20.0% |
| !! | TCTTACTTCTATTATTGATA+GGG | + | chr3.3:80071498-80071517 | MS.gene049262:intron | 20.0% |
| !!! | AAAGCATGTATATTGTTTTT+TGG | + | chr3.3:80070783-80070802 | MS.gene049262:intron | 20.0% |
| !!! | AATGTGTTTGTATTTAAGAT+CGG | + | chr3.3:80070716-80070735 | MS.gene049262:intron | 20.0% |
| !!! | ACTGATTTTTAAACAGAAAA+TGG | + | chr3.3:80072083-80072102 | MS.gene049262:intron | 20.0% |
| !!! | ATTCTTCATCGTTTTTATTT+CGG | - | chr3.3:80072363-80072382 | None:intergenic | 20.0% |
| !!! | TATATATTTTTACTACACAC+AGG | + | chr3.3:80072316-80072335 | MS.gene049262:intron | 20.0% |
| !!! | TGTGTTAAATTTTCATTACT+AGG | - | chr3.3:80070341-80070360 | None:intergenic | 20.0% |
| !!! | TTAAATTTTCATTACTAGGA+GGG | - | chr3.3:80070337-80070356 | None:intergenic | 20.0% |
| ! | AAGAAGAAATAGAAAGAAAC+CGG | + | chr3.3:80070007-80070026 | MS.gene049262:CDS | 25.0% |
| ! | AAGTATAACAGCTAAAAAGA+AGG | + | chr3.3:80071366-80071385 | MS.gene049262:intron | 25.0% |
| ! | ACTGGATAATAAACTGTTAA+AGG | - | chr3.3:80072794-80072813 | None:intergenic | 25.0% |
| ! | ATATAATAACAGCTGTGATT+GGG | + | chr3.3:80070409-80070428 | MS.gene049262:CDS | 25.0% |
| ! | ATTCTTGATCATGTACTTTA+CGG | + | chr3.3:80071952-80071971 | MS.gene049262:intron | 25.0% |
| ! | GAATTTCACAAGTTTACATT+TGG | + | chr3.3:80070220-80070239 | MS.gene049262:intron | 25.0% |
| ! | GATGTAATATTCTTAAGAGT+TGG | + | chr3.3:80070842-80070861 | MS.gene049262:intron | 25.0% |
| ! | GTCTTACTTCTATTATTGAT+AGG | + | chr3.3:80071497-80071516 | MS.gene049262:intron | 25.0% |
| ! | TCAAATTCTCATTGAAATTC+AGG | + | chr3.3:80072217-80072236 | MS.gene049262:CDS | 25.0% |
| ! | TGTAAAAGATAATTACGGTA+TGG | - | chr3.3:80071020-80071039 | None:intergenic | 25.0% |
| ! | TTTAACAGTTTATTATCCAG+TGG | + | chr3.3:80072793-80072812 | MS.gene049262:CDS | 25.0% |
| !! | ACAAATGCTAATAGGTATTT+TGG | - | chr3.3:80071479-80071498 | None:intergenic | 25.0% |
| !! | GTTAAATTTTCATTACTAGG+AGG | - | chr3.3:80070338-80070357 | None:intergenic | 25.0% |
| !! | TAGTTTCAAACATAATTTGC+AGG | + | chr3.3:80070888-80070907 | MS.gene049262:intron | 25.0% |
| !!! | ACATATTTTTGATCCATCAA+TGG | - | chr3.3:80071420-80071439 | None:intergenic | 25.0% |
| ACATTGCAACAAAAGTAGTT+AGG | - | chr3.3:80072718-80072737 | None:intergenic | 30.0% | |
| ATCAAACAATTGTACTCAAG+TGG | + | chr3.3:80071877-80071896 | MS.gene049262:intron | 30.0% | |
| CATATAATAACAGCTGTGAT+TGG | + | chr3.3:80070408-80070427 | MS.gene049262:CDS | 30.0% | |
| CCTTTCTTTAATGATGTTCT+GGG | + | chr3.3:80072743-80072762 | MS.gene049262:CDS | 30.0% | |
| GAAGTAAGACAAATGCTAAT+AGG | - | chr3.3:80071487-80071506 | None:intergenic | 30.0% | |
| GTCAACAACAACAAAATTGT+GGG | + | chr3.3:80072148-80072167 | MS.gene049262:CDS | 30.0% | |
| GTTCAGTACTTGTATCTTTA+TGG | + | chr3.3:80070939-80070958 | MS.gene049262:CDS | 30.0% | |
| TCAACAACAACAAAATTGTG+GGG | + | chr3.3:80072149-80072168 | MS.gene049262:CDS | 30.0% | |
| TCCTTTCTTTAATGATGTTC+TGG | + | chr3.3:80072742-80072761 | MS.gene049262:CDS | 30.0% | |
| TGTCAACAACAACAAAATTG+TGG | + | chr3.3:80072147-80072166 | MS.gene049262:CDS | 30.0% | |
| TTACATCCAAAAGTAGAACT+TGG | - | chr3.3:80071930-80071949 | None:intergenic | 30.0% | |
| TTTGCTTGTATTTAAGAGCA+TGG | - | chr3.3:80070663-80070682 | None:intergenic | 30.0% | |
| ! | AAAGAGAAGCTATACTTTTG+TGG | + | chr3.3:80070575-80070594 | MS.gene049262:CDS | 30.0% |
| ! | AGAACTTGGTTCTCTAAATT+TGG | - | chr3.3:80071916-80071935 | None:intergenic | 30.0% |
| ! | ATAGCTGCAATAATGTCTTT+TGG | + | chr3.3:80071730-80071749 | MS.gene049262:CDS | 30.0% |
| ! | TTGAGAGTATGAATAAGCAA+AGG | - | chr3.3:80072201-80072220 | None:intergenic | 30.0% |
| ! | TTGCTTGTATTTAAGAGCAT+GGG | - | chr3.3:80070662-80070681 | None:intergenic | 30.0% |
| ! | TTTCAAACATAATTTGCAGG+CGG | + | chr3.3:80070891-80070910 | MS.gene049262:intron | 30.0% |
| !! | ACAGCATTTTATTTGCTTTG+TGG | + | chr3.3:80072410-80072429 | MS.gene049262:CDS | 30.0% |
| !! | ATCCATTTAGAACTCCATTT+TGG | - | chr3.3:80072845-80072864 | None:intergenic | 30.0% |
| !! | TCCATTTAGAACTCCATTTT+GGG | - | chr3.3:80072844-80072863 | None:intergenic | 30.0% |
| !! | TTCATCGTTTTTATTTCGGA+TGG | - | chr3.3:80072359-80072378 | None:intergenic | 30.0% |
| !! | TTTGTGTTCCACTTTTGTTT+GGG | - | chr3.3:80072624-80072643 | None:intergenic | 30.0% |
| !! | TTTTGTGTTCCACTTTTGTT+TGG | - | chr3.3:80072625-80072644 | None:intergenic | 30.0% |
| !!! | GAGTTCTAAATGGATTTTGT+TGG | + | chr3.3:80072850-80072869 | MS.gene049262:CDS | 30.0% |
| !!! | TGTTAACAGTCTCGTTTTTT+GGG | - | chr3.3:80072011-80072030 | None:intergenic | 30.0% |
| !!! | TTTTGTTGTTGTTATGAGAC+AGG | + | chr3.3:80070363-80070382 | MS.gene049262:intron | 30.0% |
| AACAGAAAATGGTACCTTCA+AGG | + | chr3.3:80072094-80072113 | MS.gene049262:intron | 35.0% | |
| ACAGAAAATGGTACCTTCAA+GGG | + | chr3.3:80072095-80072114 | MS.gene049262:intron | 35.0% | |
| ACTCCAAAACTGATCATGTA+TGG | - | chr3.3:80071652-80071671 | None:intergenic | 35.0% | |
| ATCAACTCACATCATGCTAA+TGG | - | chr3.3:80070994-80071013 | None:intergenic | 35.0% | |
| ATGAAGTATACAAAGTGACG+AGG | - | chr3.3:80070512-80070531 | None:intergenic | 35.0% | |
| ATGCTTCATTGTATCAGTTG+TGG | + | chr3.3:80072889-80072908 | MS.gene049262:CDS | 35.0% | |
| CAAGCATTACTCGTTGTATT+TGG | + | chr3.3:80071038-80071057 | MS.gene049262:intron | 35.0% | |
| CCCAGAACATCATTAAAGAA+AGG | - | chr3.3:80072746-80072765 | None:intergenic | 35.0% | |
| CTCCAAAACTGATCATGTAT+GGG | - | chr3.3:80071651-80071670 | None:intergenic | 35.0% | |
| CTTTAGGTCCTCTATAATAC+TGG | - | chr3.3:80072933-80072952 | None:intergenic | 35.0% | |
| GTTATGAGACAGGAACAATA+TGG | + | chr3.3:80070373-80070392 | MS.gene049262:intron | 35.0% | |
| TAATGTGTACCTGTTCGTTT+AGG | - | chr3.3:80070096-80070115 | None:intergenic | 35.0% | |
| TATCTTTATGGCAGTGCAAT+AGG | + | chr3.3:80070951-80070970 | MS.gene049262:CDS | 35.0% | |
| TCAACTCACATCATGCTAAT+GGG | - | chr3.3:80070993-80071012 | None:intergenic | 35.0% | |
| TCTAGATGTCTCCATTTATC+AGG | + | chr3.3:80071595-80071614 | MS.gene049262:CDS | 35.0% | |
| TGGAGATGTATATCTTGCAA+AGG | + | chr3.3:80072813-80072832 | MS.gene049262:CDS | 35.0% | |
| TTAGTATGTACAATCCAGCT+TGG | + | chr3.3:80072489-80072508 | MS.gene049262:CDS | 35.0% | |
| TTCCAGAGTTTCATAATACG+TGG | + | chr3.3:80071695-80071714 | MS.gene049262:CDS | 35.0% | |
| ! | AACCCATACATGATCAGTTT+TGG | + | chr3.3:80071646-80071665 | MS.gene049262:CDS | 35.0% |
| ! | AGACAGGTTGAACATATACT+TGG | - | chr3.3:80072565-80072584 | None:intergenic | 35.0% |
| ! | AGAGAACCAAGTTCTACTTT+TGG | + | chr3.3:80071921-80071940 | MS.gene049262:intron | 35.0% |
| ! | GATCTTTTCCTCCTGATAAA+TGG | - | chr3.3:80071609-80071628 | None:intergenic | 35.0% |
| ! | TATTCAGGATCAAGTTCTGA+AGG | - | chr3.3:80070054-80070073 | None:intergenic | 35.0% |
| ! | TGAATGGCTTGTAATGCTTT+AGG | - | chr3.3:80072949-80072968 | None:intergenic | 35.0% |
| ! | TTCAAACATAATTTGCAGGC+GGG | + | chr3.3:80070892-80070911 | MS.gene049262:intron | 35.0% |
| !! | AATGATGTTCTGGGATTTCT+TGG | + | chr3.3:80072752-80072771 | MS.gene049262:CDS | 35.0% |
| !! | ATCGTTTTTATTTCGGATGG+TGG | - | chr3.3:80072356-80072375 | None:intergenic | 35.0% |
| !! | ATTCAGGATCAAGTTCTGAA+GGG | - | chr3.3:80070053-80070072 | None:intergenic | 35.0% |
| !! | GAAATTGATTTTGGGTGACA+GGG | + | chr3.3:80071561-80071580 | MS.gene049262:intron | 35.0% |
| !! | TCCCAAAATGGAGTTCTAAA+TGG | + | chr3.3:80072840-80072859 | MS.gene049262:CDS | 35.0% |
| !! | TGAAATTGATTTTGGGTGAC+AGG | + | chr3.3:80071560-80071579 | MS.gene049262:intron | 35.0% |
| !! | TTGTGTTCCACTTTTGTTTG+GGG | - | chr3.3:80072623-80072642 | None:intergenic | 35.0% |
| !! | TTGTTCTAAAGACCCACTAA+TGG | - | chr3.3:80071235-80071254 | None:intergenic | 35.0% |
| !!! | GTGTTAACAGTCTCGTTTTT+TGG | - | chr3.3:80072012-80072031 | None:intergenic | 35.0% |
| !!! | GTTAACAGTCTCGTTTTTTG+GGG | - | chr3.3:80072010-80072029 | None:intergenic | 35.0% |
| AGATGTCTCCATTTATCAGG+AGG | + | chr3.3:80071598-80071617 | MS.gene049262:CDS | 40.0% | |
| AGATTGTAAGGACGAAAACC+CGG | - | chr3.3:80072656-80072675 | None:intergenic | 40.0% | |
| CACCACGTATTATGAAACTC+TGG | - | chr3.3:80071700-80071719 | None:intergenic | 40.0% | |
| CAGAGTTTCATAATACGTGG+TGG | + | chr3.3:80071698-80071717 | MS.gene049262:CDS | 40.0% | |
| CTAGCTGAATGTTATCGTTG+TGG | + | chr3.3:80070537-80070556 | MS.gene049262:CDS | 40.0% | |
| CTATTCCACAAACCGTGTAT+TGG | - | chr3.3:80070920-80070939 | None:intergenic | 40.0% | |
| CTGAAAAGGATCATCACCAA+AGG | - | chr3.3:80070489-80070508 | None:intergenic | 40.0% | |
| GAACACAAAATTCCAATCCC+GGG | + | chr3.3:80072635-80072654 | MS.gene049262:CDS | 40.0% | |
| GGAACACAAAATTCCAATCC+CGG | + | chr3.3:80072634-80072653 | MS.gene049262:CDS | 40.0% | |
| TAGCTTCTCTTTCCATACAC+AGG | - | chr3.3:80070567-80070586 | None:intergenic | 40.0% | |
| TAGGTCCTCTATAATACTGG+CGG | - | chr3.3:80072930-80072949 | None:intergenic | 40.0% | |
| TATTTGCTTTGTGGCTGCAT+GGG | + | chr3.3:80072419-80072438 | MS.gene049262:CDS | 40.0% | |
| TGCAAAGGAAGATCCCAAAA+TGG | + | chr3.3:80072828-80072847 | MS.gene049262:CDS | 40.0% | |
| TGCAAGATATACATCTCCAC+TGG | - | chr3.3:80072812-80072831 | None:intergenic | 40.0% | |
| TTAGCAATTTCCCAAACAGC+AGG | + | chr3.3:80071775-80071794 | MS.gene049262:CDS | 40.0% | |
| TTATTTGCTTTGTGGCTGCA+TGG | + | chr3.3:80072418-80072437 | MS.gene049262:CDS | 40.0% | |
| !! | GTGTCGATCTTTTGTCTTCT+TGG | + | chr3.3:80070242-80070261 | MS.gene049262:intron | 40.0% |
| !! | TCTTTTGGCTATTCCACAGT+TGG | + | chr3.3:80071745-80071764 | MS.gene049262:CDS | 40.0% |
| !!! | TGGGGAATTTTTCAAGCTCT+TGG | + | chr3.3:80072167-80072186 | MS.gene049262:CDS | 40.0% |
| AAGATGGCCCCAAACAAAAG+TGG | + | chr3.3:80072613-80072632 | MS.gene049262:CDS | 45.0% | |
| AAGGACGATAACCTGCTGTT+TGG | - | chr3.3:80071789-80071808 | None:intergenic | 45.0% | |
| AAGGGACACCATCTATGGAA+TGG | - | chr3.3:80070035-80070054 | None:intergenic | 45.0% | |
| ACAAAGTGACGAGGCTGAAA+AGG | - | chr3.3:80070503-80070522 | None:intergenic | 45.0% | |
| AGAACGGAGCAGCAAAAAGA+TGG | + | chr3.3:80072597-80072616 | MS.gene049262:CDS | 45.0% | |
| ATAACAGCTGTGATTGGGTC+TGG | + | chr3.3:80070414-80070433 | MS.gene049262:CDS | 45.0% | |
| ATACTTGGTATGCTCCCACA+AGG | - | chr3.3:80072550-80072569 | None:intergenic | 45.0% | |
| CATTTGGAGAACAAGCACCA+GGG | + | chr3.3:80072450-80072469 | MS.gene049262:CDS | 45.0% | |
| CTCAACCGCCAGTATTATAG+AGG | + | chr3.3:80072922-80072941 | MS.gene049262:CDS | 45.0% | |
| GATGCAGTTCGTAGCATTCT+TGG | + | chr3.3:80070597-80070616 | MS.gene049262:CDS | 45.0% | |
| GATTGTAAGGACGAAAACCC+GGG | - | chr3.3:80072655-80072674 | None:intergenic | 45.0% | |
| GTCTTTGCCTTCGTAGAGAA+CGG | + | chr3.3:80072581-80072600 | MS.gene049262:CDS | 45.0% | |
| TAACAGCTGTGATTGGGTCT+GGG | + | chr3.3:80070415-80070434 | MS.gene049262:CDS | 45.0% | |
| TGCTAAAAAGACGCCAACTG+TGG | - | chr3.3:80071761-80071780 | None:intergenic | 45.0% | |
| TTCTCTACGAAGGCAAAGAC+AGG | - | chr3.3:80072581-80072600 | None:intergenic | 45.0% | |
| ! | AGGACGATAACCTGCTGTTT+GGG | - | chr3.3:80071788-80071807 | None:intergenic | 45.0% |
| ! | TTCTGAAGGGACACCATCTA+TGG | - | chr3.3:80070040-80070059 | None:intergenic | 45.0% |
| ! | TTCTTGGAGCAGTGGGATTT+TGG | + | chr3.3:80072768-80072787 | MS.gene049262:CDS | 45.0% |
| !!! | CAGTCTCGTTTTTTGGGGAA+AGG | - | chr3.3:80072005-80072024 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAACATTTAATT+CGG | + | chr3.3:80072037-80072056 | MS.gene049262:intron | 5.0% |
| AACAGCTGTGATTGGGTCTG+GGG | + | chr3.3:80070416-80070435 | MS.gene049262:CDS | 50.0% | |
| AACCGGAGCCATTCCATAGA+TGG | + | chr3.3:80070024-80070043 | MS.gene049262:CDS | 50.0% | |
| AATCCAGTGAGCAAGTTCCC+TGG | - | chr3.3:80072470-80072489 | None:intergenic | 50.0% | |
| ACGGTAACTCGAACGAACTC+AGG | + | chr3.3:80071971-80071990 | MS.gene049262:intron | 50.0% | |
| CACCATCTATGGAATGGCTC+CGG | - | chr3.3:80070029-80070048 | None:intergenic | 50.0% | |
| CCTGAATACTTCGACGACGA+TGG | + | chr3.3:80070066-80070085 | MS.gene049262:CDS | 50.0% | |
| CGTTGTGGAGATCCTGTGTA+TGG | + | chr3.3:80070552-80070571 | MS.gene049262:CDS | 50.0% | |
| CTGGGATTTCTTGGAGCAGT+GGG | + | chr3.3:80072761-80072780 | MS.gene049262:CDS | 50.0% | |
| GATGGTCGTCCTAAACGAAC+AGG | + | chr3.3:80070084-80070103 | MS.gene049262:CDS | 50.0% | |
| GCATTTGGAGAACAAGCACC+AGG | + | chr3.3:80072449-80072468 | MS.gene049262:CDS | 50.0% | |
| GGGTTGCTTGACATGTGACA+TGG | - | chr3.3:80071631-80071650 | None:intergenic | 50.0% | |
| GTATCAGTTGTGGCTGCTCT+TGG | + | chr3.3:80072899-80072918 | MS.gene049262:CDS | 50.0% | |
| TAAGGACGAAAACCCGGGAT+TGG | - | chr3.3:80072650-80072669 | None:intergenic | 50.0% | |
| ! | CCATCGTCGTCGAAGTATTC+AGG | - | chr3.3:80070069-80070088 | None:intergenic | 50.0% |
| ! | GCTATCCTTAGCATGGGCTA+CGG | + | chr3.3:80070440-80070459 | MS.gene049262:CDS | 50.0% |
| ! | TCCAGCTTGGCTCATCGATT+TGG | + | chr3.3:80072502-80072521 | MS.gene049262:CDS | 50.0% |
| ! | TCTGGGATTTCTTGGAGCAG+TGG | + | chr3.3:80072760-80072779 | MS.gene049262:CDS | 50.0% |
| ! | TGCATGGGCTATGCTGCATT+TGG | + | chr3.3:80072434-80072453 | MS.gene049262:CDS | 50.0% |
| ! | TGGGGTGCTATCCTTAGCAT+GGG | + | chr3.3:80070434-80070453 | MS.gene049262:CDS | 50.0% |
| !! | ACCTTCAAGGGTACTCTCAC+TGG | + | chr3.3:80072107-80072126 | MS.gene049262:CDS | 50.0% |
| !! | ACGGCACAATTGGGTTGGAT+TGG | + | chr3.3:80070459-80070478 | MS.gene049262:CDS | 50.0% |
| !! | GCACAATTGGGTTGGATTGG+TGG | + | chr3.3:80070462-80070481 | MS.gene049262:CDS | 50.0% |
| !! | TCCAGTGAGAGTACCCTTGA+AGG | - | chr3.3:80072111-80072130 | None:intergenic | 50.0% |
| !! | TCCCACAAGGTGGATTACGA+CGG | - | chr3.3:80072537-80072556 | None:intergenic | 50.0% |
| !! | TTCAAGGGTACTCTCACTGG+AGG | + | chr3.3:80072110-80072129 | MS.gene049262:CDS | 50.0% |
| CTTGGTATGCTCCCACAAGG+TGG | - | chr3.3:80072547-80072566 | None:intergenic | 55.0% | |
| GCCAAATCGATGAGCCAAGC+TGG | - | chr3.3:80072506-80072525 | None:intergenic | 55.0% | |
| GCCGTCGTAATCCACCTTGT+GGG | + | chr3.3:80072533-80072552 | MS.gene049262:CDS | 55.0% | |
| TGCCGTCGTAATCCACCTTG+TGG | + | chr3.3:80072532-80072551 | MS.gene049262:CDS | 55.0% | |
| TGCTGCTCCGTTCTCTACGA+AGG | - | chr3.3:80072591-80072610 | None:intergenic | 55.0% | |
| TTGTGCCGTAGCCCATGCTA+AGG | - | chr3.3:80070448-80070467 | None:intergenic | 55.0% | |
| ! | AGCATGGGCTACGGCACAAT+TGG | + | chr3.3:80070449-80070468 | MS.gene049262:CDS | 55.0% |
| ! | CTGGGGTGCTATCCTTAGCA+TGG | + | chr3.3:80070433-80070452 | MS.gene049262:CDS | 55.0% |
| ! | GCATGGGCTACGGCACAATT+GGG | + | chr3.3:80070450-80070469 | MS.gene049262:CDS | 55.0% |
| !! | GGGTTGGATTGGTGGTCCTT+TGG | + | chr3.3:80070470-80070489 | MS.gene049262:CDS | 55.0% |
| GGGCGCCAATACACGGTTTG+TGG | + | chr3.3:80070912-80070931 | MS.gene049262:CDS | 60.0% | |
| GGGCTACGGCACAATTGGGT+TGG | + | chr3.3:80070454-80070473 | MS.gene049262:CDS | 60.0% | |
| ! | GCACCAGGGAACTTGCTCAC+TGG | + | chr3.3:80072464-80072483 | MS.gene049262:CDS | 60.0% |
| TGCAGGCGGGCGCCAATACA+CGG | + | chr3.3:80070905-80070924 | MS.gene049262:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 80070000 | 80072982 | 80070000 | ID=MS.gene049262 |
| chr3.3 | mRNA | 80070000 | 80072982 | 80070000 | ID=MS.gene049262.t1;Parent=MS.gene049262 |
| chr3.3 | exon | 80070000 | 80070105 | 80070000 | ID=MS.gene049262.t1.exon1;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80070000 | 80070105 | 80070000 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| chr3.3 | exon | 80070385 | 80070618 | 80070385 | ID=MS.gene049262.t1.exon2;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80070385 | 80070618 | 80070385 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| chr3.3 | exon | 80070910 | 80071003 | 80070910 | ID=MS.gene049262.t1.exon3;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80070910 | 80071003 | 80070910 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| chr3.3 | exon | 80071582 | 80071796 | 80071582 | ID=MS.gene049262.t1.exon4;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80071582 | 80071796 | 80071582 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| chr3.3 | exon | 80072099 | 80072238 | 80072099 | ID=MS.gene049262.t1.exon5;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80072099 | 80072238 | 80072099 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| chr3.3 | exon | 80072338 | 80072982 | 80072338 | ID=MS.gene049262.t1.exon6;Parent=MS.gene049262.t1 |
| chr3.3 | CDS | 80072338 | 80072982 | 80072338 | ID=cds.MS.gene049262.t1;Parent=MS.gene049262.t1 |
| Gene Sequence |
| Protein sequence |
