Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42872.t1 | XP_003623414.1 | 92.2 | 449 | 31 | 3 | 1 | 447 | 1 | 447 | 6.90E-223 | 783.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42872.t1 | Q2RBJ6 | 49.1 | 393 | 184 | 5 | 57 | 444 | 30 | 411 | 5.2e-102 | 372.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42872.t1 | G7KU50 | 92.2 | 449 | 31 | 3 | 1 | 447 | 1 | 447 | 5.0e-223 | 783.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061233 | MS.gene42872 | 0.800831 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08994 | MS.gene42872 | PPI |
| MS.gene39977 | MS.gene42872 | PPI |
| MS.gene42872 | MS.gene32044 | PPI |
| MS.gene036217 | MS.gene42872 | PPI |
| MS.gene42872 | MS.gene004666 | PPI |
| MS.gene42872 | MS.gene09251 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42872.t1 | MTR_7g070510 | 93.764 | 449 | 24 | 3 | 1 | 447 | 1 | 447 | 0.0 | 849 |
| MS.gene42872.t1 | MTR_4g013295 | 56.989 | 372 | 133 | 7 | 1 | 369 | 1 | 348 | 1.15e-146 | 422 |
| MS.gene42872.t1 | MTR_7g021530 | 46.062 | 419 | 208 | 7 | 1 | 412 | 1 | 408 | 1.40e-122 | 363 |
| MS.gene42872.t1 | MTR_7g021530 | 49.351 | 385 | 184 | 6 | 1 | 378 | 42 | 422 | 5.13e-122 | 363 |
| MS.gene42872.t1 | MTR_7g080170 | 46.387 | 429 | 182 | 8 | 52 | 432 | 57 | 485 | 1.25e-119 | 358 |
| MS.gene42872.t1 | MTR_4g037470 | 42.615 | 413 | 199 | 8 | 56 | 436 | 62 | 468 | 2.28e-113 | 341 |
| MS.gene42872.t1 | MTR_4g037470 | 41.706 | 422 | 199 | 9 | 56 | 436 | 62 | 477 | 2.94e-110 | 333 |
| MS.gene42872.t1 | MTR_2g090190 | 44.282 | 411 | 193 | 7 | 56 | 432 | 56 | 464 | 1.08e-109 | 332 |
| MS.gene42872.t1 | MTR_7g021530 | 48.378 | 339 | 160 | 5 | 81 | 412 | 28 | 358 | 4.20e-106 | 319 |
| MS.gene42872.t1 | MTR_7g112490 | 45.092 | 326 | 171 | 3 | 52 | 375 | 52 | 371 | 1.30e-99 | 303 |
| MS.gene42872.t1 | MTR_1g083690 | 44.514 | 319 | 163 | 3 | 47 | 364 | 45 | 350 | 1.46e-99 | 302 |
| MS.gene42872.t1 | MTR_7g112490 | 45.092 | 326 | 171 | 3 | 52 | 375 | 70 | 389 | 2.17e-99 | 303 |
| MS.gene42872.t1 | MTR_8g017240 | 50.955 | 314 | 132 | 5 | 52 | 364 | 47 | 339 | 4.48e-99 | 301 |
| MS.gene42872.t1 | MTR_4g120410 | 46.129 | 310 | 153 | 4 | 60 | 368 | 60 | 356 | 1.22e-97 | 297 |
| MS.gene42872.t1 | MTR_2g435550 | 45.161 | 310 | 156 | 2 | 60 | 368 | 47 | 343 | 3.00e-95 | 291 |
| MS.gene42872.t1 | MTR_2g435550 | 45.161 | 310 | 156 | 2 | 60 | 368 | 61 | 357 | 4.48e-95 | 291 |
| MS.gene42872.t1 | MTR_7g021530 | 46.749 | 323 | 162 | 5 | 1 | 316 | 1 | 320 | 5.94e-94 | 286 |
| MS.gene42872.t1 | MTR_7g021530 | 46.749 | 323 | 162 | 5 | 1 | 316 | 42 | 361 | 1.71e-93 | 286 |
| MS.gene42872.t1 | MTR_7g080170 | 44.681 | 376 | 160 | 8 | 105 | 432 | 2 | 377 | 1.29e-92 | 285 |
| MS.gene42872.t1 | MTR_1g016620 | 44.839 | 310 | 157 | 3 | 59 | 368 | 37 | 332 | 6.56e-89 | 274 |
| MS.gene42872.t1 | MTR_2g435550 | 45.139 | 288 | 144 | 2 | 60 | 346 | 61 | 335 | 1.93e-87 | 272 |
| MS.gene42872.t1 | MTR_7g021530 | 42.798 | 243 | 129 | 5 | 1 | 236 | 1 | 240 | 1.53e-54 | 183 |
| MS.gene42872.t1 | MTR_7g021530 | 42.798 | 243 | 129 | 5 | 1 | 236 | 42 | 281 | 5.90e-54 | 182 |
| MS.gene42872.t1 | MTR_4g118340 | 28.344 | 314 | 160 | 8 | 60 | 345 | 47 | 323 | 4.87e-33 | 129 |
| MS.gene42872.t1 | MTR_6g087000 | 26.923 | 338 | 181 | 13 | 64 | 375 | 97 | 394 | 4.14e-27 | 115 |
| MS.gene42872.t1 | MTR_6g087000 | 26.923 | 338 | 181 | 13 | 64 | 375 | 97 | 394 | 7.25e-27 | 114 |
| MS.gene42872.t1 | MTR_2g020970 | 26.518 | 313 | 172 | 5 | 57 | 346 | 48 | 325 | 8.18e-27 | 110 |
| MS.gene42872.t1 | MTR_2g020970 | 26.531 | 343 | 189 | 8 | 57 | 376 | 48 | 350 | 1.22e-26 | 111 |
| MS.gene42872.t1 | MTR_3g105730 | 31.469 | 286 | 137 | 10 | 91 | 375 | 65 | 292 | 1.31e-25 | 106 |
| MS.gene42872.t1 | MTR_3g105730 | 31.690 | 284 | 135 | 10 | 93 | 375 | 45 | 270 | 1.61e-25 | 105 |
| MS.gene42872.t1 | MTR_5g009370 | 30.996 | 271 | 138 | 8 | 60 | 326 | 55 | 280 | 1.37e-24 | 104 |
| MS.gene42872.t1 | MTR_1g014640 | 28.623 | 276 | 139 | 7 | 93 | 367 | 110 | 328 | 5.39e-24 | 102 |
| MS.gene42872.t1 | MTR_1g013400 | 28.623 | 276 | 139 | 7 | 93 | 367 | 110 | 328 | 5.39e-24 | 102 |
| MS.gene42872.t1 | MTR_3g104710 | 31.359 | 287 | 139 | 13 | 71 | 354 | 269 | 500 | 1.10e-23 | 103 |
| MS.gene42872.t1 | MTR_1g015110 | 31.522 | 276 | 130 | 11 | 91 | 343 | 290 | 529 | 2.28e-22 | 100 |
| MS.gene42872.t1 | MTR_3g068200 | 29.811 | 265 | 123 | 10 | 74 | 324 | 106 | 321 | 1.72e-21 | 96.3 |
| MS.gene42872.t1 | MTR_4g123080 | 27.731 | 357 | 187 | 13 | 64 | 403 | 60 | 362 | 9.58e-21 | 93.6 |
| MS.gene42872.t1 | MTR_4g125810 | 34.764 | 233 | 112 | 10 | 91 | 323 | 253 | 445 | 1.22e-20 | 94.7 |
| MS.gene42872.t1 | MTR_4g123080 | 27.731 | 357 | 187 | 13 | 64 | 403 | 78 | 380 | 1.82e-20 | 93.2 |
| MS.gene42872.t1 | MTR_2g040500 | 31.004 | 229 | 139 | 8 | 91 | 319 | 267 | 476 | 2.54e-20 | 94.0 |
| MS.gene42872.t1 | MTR_8g102550 | 31.760 | 233 | 109 | 8 | 91 | 320 | 152 | 337 | 3.06e-20 | 92.8 |
| MS.gene42872.t1 | MTR_1g115570 | 27.758 | 281 | 137 | 11 | 91 | 369 | 126 | 342 | 2.85e-19 | 89.0 |
| MS.gene42872.t1 | MTR_2g033000 | 27.742 | 310 | 152 | 11 | 61 | 343 | 53 | 317 | 1.10e-18 | 87.8 |
| MS.gene42872.t1 | MTR_4g094542 | 38.272 | 162 | 84 | 6 | 181 | 341 | 202 | 348 | 2.27e-18 | 86.7 |
| MS.gene42872.t1 | MTR_5g080680 | 28.409 | 264 | 126 | 7 | 74 | 324 | 115 | 328 | 3.06e-18 | 86.7 |
| MS.gene42872.t1 | MTR_1g086350 | 29.008 | 262 | 133 | 9 | 91 | 343 | 102 | 319 | 4.56e-18 | 85.9 |
| MS.gene42872.t1 | MTR_1g086350 | 29.008 | 262 | 133 | 9 | 91 | 343 | 118 | 335 | 5.34e-18 | 85.9 |
| MS.gene42872.t1 | MTR_2g078760 | 37.821 | 156 | 81 | 6 | 188 | 342 | 98 | 238 | 6.73e-17 | 80.5 |
| MS.gene42872.t1 | MTR_6g081850 | 28.241 | 216 | 120 | 6 | 165 | 364 | 122 | 318 | 6.98e-17 | 81.6 |
| MS.gene42872.t1 | MTR_1g086350 | 28.077 | 260 | 132 | 9 | 94 | 343 | 19 | 233 | 8.80e-17 | 80.9 |
| MS.gene42872.t1 | MTR_3g464650 | 25.806 | 372 | 200 | 14 | 1 | 366 | 15 | 316 | 1.92e-16 | 80.5 |
| MS.gene42872.t1 | MTR_2g078760 | 37.821 | 156 | 81 | 6 | 188 | 342 | 177 | 317 | 1.94e-16 | 80.5 |
| MS.gene42872.t1 | MTR_5g071550 | 27.481 | 262 | 138 | 9 | 62 | 323 | 125 | 334 | 4.44e-16 | 80.1 |
| MS.gene42872.t1 | MTR_3g074610 | 37.580 | 157 | 82 | 6 | 188 | 343 | 126 | 267 | 8.10e-16 | 77.8 |
| MS.gene42872.t1 | MTR_3g464700 | 28.626 | 262 | 135 | 10 | 62 | 323 | 89 | 298 | 8.66e-16 | 78.6 |
| MS.gene42872.t1 | MTR_8g463130 | 27.365 | 296 | 154 | 12 | 55 | 342 | 24 | 266 | 1.41e-15 | 77.4 |
| MS.gene42872.t1 | MTR_4g094208 | 35.897 | 156 | 84 | 6 | 188 | 342 | 121 | 261 | 1.42e-15 | 77.0 |
| MS.gene42872.t1 | MTR_1g050520 | 25.974 | 308 | 167 | 12 | 64 | 364 | 391 | 644 | 1.64e-15 | 79.3 |
| MS.gene42872.t1 | MTR_8g463130 | 27.586 | 290 | 150 | 12 | 61 | 342 | 1 | 238 | 2.37e-15 | 76.3 |
| MS.gene42872.t1 | MTR_2g008850 | 34.395 | 157 | 87 | 6 | 188 | 343 | 79 | 220 | 3.29e-15 | 75.1 |
| MS.gene42872.t1 | MTR_7g090530 | 26.045 | 311 | 167 | 12 | 57 | 344 | 40 | 310 | 4.31e-15 | 77.4 |
| MS.gene42872.t1 | MTR_2g008850 | 34.395 | 157 | 87 | 6 | 188 | 343 | 125 | 266 | 1.22e-14 | 74.3 |
| MS.gene42872.t1 | MTR_1g028300 | 30.769 | 234 | 114 | 9 | 91 | 324 | 145 | 330 | 1.33e-14 | 75.5 |
| MS.gene42872.t1 | MTR_5g063940 | 36.306 | 157 | 84 | 6 | 188 | 343 | 79 | 220 | 1.62e-14 | 73.2 |
| MS.gene42872.t1 | MTR_3g107880 | 26.733 | 303 | 156 | 10 | 91 | 387 | 63 | 305 | 1.95e-14 | 74.3 |
| MS.gene42872.t1 | MTR_3g107880 | 26.733 | 303 | 156 | 10 | 91 | 387 | 121 | 363 | 3.15e-14 | 74.3 |
| MS.gene42872.t1 | MTR_5g063940 | 36.306 | 157 | 84 | 6 | 188 | 343 | 126 | 267 | 3.32e-14 | 73.2 |
| MS.gene42872.t1 | MTR_3g107880 | 26.733 | 303 | 156 | 10 | 91 | 387 | 120 | 362 | 3.59e-14 | 74.3 |
| MS.gene42872.t1 | MTR_3g105880 | 24.699 | 332 | 181 | 12 | 45 | 342 | 13 | 309 | 7.15e-14 | 73.2 |
| MS.gene42872.t1 | MTR_5g024340 | 26.838 | 272 | 116 | 8 | 91 | 343 | 124 | 331 | 8.23e-14 | 73.2 |
| MS.gene42872.t1 | MTR_3g105880 | 24.839 | 310 | 168 | 11 | 45 | 324 | 13 | 287 | 3.94e-13 | 70.5 |
| MS.gene42872.t1 | MTR_3g091060 | 26.556 | 241 | 106 | 9 | 93 | 323 | 127 | 306 | 4.22e-13 | 70.9 |
| MS.gene42872.t1 | MTR_7g100240 | 26.429 | 280 | 145 | 10 | 82 | 337 | 63 | 305 | 1.34e-12 | 69.3 |
| MS.gene42872.t1 | MTR_2g078760 | 40.625 | 128 | 60 | 6 | 188 | 314 | 177 | 289 | 2.10e-12 | 67.8 |
| MS.gene42872.t1 | MTR_7g060770 | 22.772 | 303 | 180 | 10 | 63 | 342 | 239 | 510 | 2.38e-12 | 69.3 |
| MS.gene42872.t1 | MTR_4g007440 | 26.042 | 192 | 117 | 4 | 188 | 371 | 160 | 334 | 7.50e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42872.t1 | AT5G01700 | 50.535 | 374 | 146 | 5 | 1 | 368 | 1 | 341 | 1.61e-129 | 379 |
| MS.gene42872.t1 | AT1G79630 | 43.458 | 428 | 190 | 7 | 56 | 431 | 63 | 490 | 6.25e-120 | 359 |
| MS.gene42872.t1 | AT1G79630 | 43.458 | 428 | 190 | 7 | 56 | 431 | 59 | 486 | 6.43e-120 | 359 |
| MS.gene42872.t1 | AT1G16220 | 43.780 | 418 | 193 | 6 | 56 | 431 | 60 | 477 | 1.13e-119 | 358 |
| MS.gene42872.t1 | AT5G01700 | 52.941 | 306 | 130 | 2 | 63 | 368 | 1 | 292 | 1.20e-119 | 352 |
| MS.gene42872.t1 | AT5G36250 | 44.444 | 405 | 203 | 6 | 38 | 429 | 46 | 441 | 8.45e-118 | 352 |
| MS.gene42872.t1 | AT5G36250 | 42.959 | 419 | 203 | 7 | 38 | 429 | 46 | 455 | 1.07e-113 | 342 |
| MS.gene42872.t1 | AT1G03590 | 44.444 | 405 | 191 | 7 | 56 | 431 | 56 | 455 | 2.73e-112 | 338 |
| MS.gene42872.t1 | AT4G03415 | 44.472 | 407 | 185 | 9 | 63 | 437 | 70 | 467 | 3.70e-111 | 336 |
| MS.gene42872.t1 | AT4G03415 | 44.472 | 407 | 185 | 9 | 63 | 437 | 70 | 467 | 3.70e-111 | 336 |
| MS.gene42872.t1 | AT4G03415 | 44.472 | 407 | 185 | 9 | 63 | 437 | 70 | 467 | 3.70e-111 | 336 |
| MS.gene42872.t1 | AT3G02750 | 44.240 | 434 | 183 | 7 | 54 | 431 | 58 | 488 | 3.79e-111 | 337 |
| MS.gene42872.t1 | AT3G02750 | 44.240 | 434 | 183 | 7 | 54 | 431 | 58 | 488 | 3.79e-111 | 337 |
| MS.gene42872.t1 | AT1G79630 | 42.432 | 403 | 180 | 7 | 81 | 431 | 18 | 420 | 2.05e-108 | 327 |
| MS.gene42872.t1 | AT1G79630 | 42.432 | 403 | 180 | 7 | 81 | 431 | 18 | 420 | 2.05e-108 | 327 |
| MS.gene42872.t1 | AT3G02750 | 40.851 | 470 | 184 | 8 | 54 | 432 | 58 | 524 | 1.82e-103 | 318 |
| MS.gene42872.t1 | AT1G79630 | 48.630 | 292 | 125 | 4 | 165 | 431 | 89 | 380 | 8.91e-96 | 294 |
| MS.gene42872.t1 | AT1G79630 | 48.630 | 292 | 125 | 4 | 165 | 431 | 89 | 380 | 8.91e-96 | 294 |
| MS.gene42872.t1 | AT1G79630 | 48.630 | 292 | 125 | 4 | 165 | 431 | 89 | 380 | 8.91e-96 | 294 |
| MS.gene42872.t1 | AT1G79630 | 48.630 | 292 | 125 | 4 | 165 | 431 | 89 | 380 | 8.91e-96 | 294 |
| MS.gene42872.t1 | AT3G05640 | 44.516 | 310 | 153 | 3 | 56 | 364 | 58 | 349 | 6.64e-94 | 288 |
| MS.gene42872.t1 | AT3G05640 | 44.516 | 310 | 153 | 3 | 56 | 364 | 58 | 349 | 6.64e-94 | 288 |
| MS.gene42872.t1 | AT3G05640 | 44.516 | 310 | 153 | 3 | 56 | 364 | 58 | 349 | 6.64e-94 | 288 |
| MS.gene42872.t1 | AT5G27930 | 43.492 | 315 | 161 | 4 | 52 | 363 | 53 | 353 | 5.19e-93 | 286 |
| MS.gene42872.t1 | AT5G27930 | 43.492 | 315 | 161 | 4 | 52 | 363 | 53 | 353 | 5.19e-93 | 286 |
| MS.gene42872.t1 | AT3G16800 | 41.193 | 352 | 181 | 5 | 16 | 364 | 20 | 348 | 1.98e-88 | 273 |
| MS.gene42872.t1 | AT3G16800 | 41.193 | 352 | 181 | 5 | 16 | 364 | 20 | 348 | 1.98e-88 | 273 |
| MS.gene42872.t1 | AT3G16800 | 41.193 | 352 | 181 | 5 | 16 | 364 | 20 | 348 | 1.98e-88 | 273 |
| MS.gene42872.t1 | AT5G36250 | 46.897 | 290 | 140 | 5 | 38 | 314 | 46 | 334 | 3.93e-88 | 273 |
| MS.gene42872.t1 | AT3G16800 | 44.161 | 274 | 129 | 4 | 94 | 364 | 1 | 253 | 2.36e-74 | 234 |
| MS.gene42872.t1 | AT3G16800 | 44.161 | 274 | 129 | 4 | 94 | 364 | 1 | 253 | 2.36e-74 | 234 |
| MS.gene42872.t1 | AT5G27930 | 43.130 | 262 | 134 | 5 | 52 | 311 | 53 | 301 | 4.14e-73 | 233 |
| MS.gene42872.t1 | AT5G26010 | 40.653 | 337 | 173 | 5 | 33 | 367 | 16 | 327 | 1.06e-72 | 232 |
| MS.gene42872.t1 | AT4G32950 | 41.558 | 308 | 146 | 5 | 62 | 367 | 44 | 319 | 1.46e-72 | 231 |
| MS.gene42872.t1 | AT4G32950 | 42.063 | 252 | 112 | 5 | 62 | 311 | 44 | 263 | 1.67e-54 | 183 |
| MS.gene42872.t1 | AT3G16800 | 34.348 | 230 | 125 | 5 | 16 | 242 | 20 | 226 | 2.52e-35 | 131 |
| MS.gene42872.t1 | AT3G06270 | 27.891 | 294 | 155 | 6 | 73 | 346 | 70 | 326 | 2.19e-30 | 120 |
| MS.gene42872.t1 | AT2G20050 | 26.708 | 322 | 177 | 9 | 64 | 365 | 116 | 398 | 3.54e-28 | 118 |
| MS.gene42872.t1 | AT2G20050 | 26.708 | 322 | 177 | 9 | 64 | 365 | 116 | 398 | 3.92e-28 | 118 |
| MS.gene42872.t1 | AT4G31750 | 27.027 | 296 | 156 | 8 | 85 | 377 | 56 | 294 | 4.19e-23 | 99.4 |
| MS.gene42872.t1 | AT4G31750 | 27.027 | 296 | 156 | 8 | 85 | 377 | 56 | 294 | 5.95e-23 | 99.4 |
| MS.gene42872.t1 | AT4G31750 | 27.027 | 296 | 156 | 8 | 85 | 377 | 56 | 294 | 5.95e-23 | 99.4 |
| MS.gene42872.t1 | AT5G24940 | 30.040 | 253 | 126 | 6 | 91 | 343 | 64 | 265 | 2.91e-22 | 99.4 |
| MS.gene42872.t1 | AT1G72770 | 32.645 | 242 | 121 | 8 | 91 | 323 | 238 | 446 | 7.63e-22 | 98.6 |
| MS.gene42872.t1 | AT1G72770 | 32.645 | 242 | 121 | 8 | 91 | 323 | 238 | 446 | 7.63e-22 | 98.6 |
| MS.gene42872.t1 | AT1G72770 | 32.645 | 242 | 121 | 8 | 91 | 323 | 238 | 446 | 7.63e-22 | 98.6 |
| MS.gene42872.t1 | AT5G10740 | 31.102 | 254 | 122 | 8 | 91 | 343 | 64 | 265 | 1.10e-21 | 96.3 |
| MS.gene42872.t1 | AT5G10740 | 31.102 | 254 | 122 | 8 | 91 | 343 | 64 | 265 | 1.10e-21 | 96.3 |
| MS.gene42872.t1 | AT1G07430 | 37.288 | 177 | 83 | 5 | 161 | 324 | 193 | 354 | 1.77e-20 | 94.0 |
| MS.gene42872.t1 | AT5G59220 | 31.325 | 249 | 108 | 9 | 88 | 324 | 145 | 342 | 2.07e-19 | 90.5 |
| MS.gene42872.t1 | AT5G57050 | 30.901 | 233 | 120 | 7 | 91 | 323 | 120 | 311 | 2.18e-19 | 90.1 |
| MS.gene42872.t1 | AT5G57050 | 30.901 | 233 | 120 | 7 | 91 | 323 | 160 | 351 | 2.35e-19 | 90.5 |
| MS.gene42872.t1 | AT1G17550 | 30.041 | 243 | 119 | 8 | 91 | 319 | 237 | 442 | 1.08e-18 | 89.0 |
| MS.gene42872.t1 | AT1G17550 | 30.041 | 243 | 119 | 8 | 91 | 319 | 237 | 442 | 1.08e-18 | 89.0 |
| MS.gene42872.t1 | AT4G26080 | 32.751 | 229 | 111 | 9 | 91 | 319 | 172 | 357 | 1.38e-18 | 88.2 |
| MS.gene42872.t1 | AT2G34740 | 32.663 | 199 | 111 | 8 | 167 | 364 | 159 | 335 | 3.90e-18 | 85.9 |
| MS.gene42872.t1 | AT1G43900 | 30.952 | 252 | 120 | 9 | 89 | 339 | 152 | 350 | 5.81e-18 | 85.5 |
| MS.gene42872.t1 | AT1G67820 | 26.332 | 319 | 178 | 9 | 63 | 380 | 87 | 349 | 5.84e-18 | 85.9 |
| MS.gene42872.t1 | AT1G67820 | 26.019 | 319 | 179 | 9 | 63 | 380 | 123 | 385 | 7.27e-18 | 85.9 |
| MS.gene42872.t1 | AT3G17250 | 27.559 | 254 | 125 | 7 | 89 | 330 | 156 | 362 | 8.59e-18 | 85.5 |
| MS.gene42872.t1 | AT4G28400 | 29.866 | 298 | 144 | 14 | 55 | 342 | 3 | 245 | 9.66e-18 | 83.2 |
| MS.gene42872.t1 | AT3G11410 | 35.326 | 184 | 83 | 6 | 161 | 323 | 173 | 341 | 1.10e-17 | 85.1 |
| MS.gene42872.t1 | AT5G02760 | 26.300 | 327 | 158 | 12 | 91 | 376 | 72 | 356 | 1.29e-17 | 84.7 |
| MS.gene42872.t1 | AT4G28400 | 29.866 | 298 | 144 | 14 | 55 | 342 | 25 | 267 | 1.53e-17 | 83.2 |
| MS.gene42872.t1 | AT5G51760 | 33.168 | 202 | 108 | 6 | 154 | 343 | 155 | 341 | 1.83e-17 | 84.3 |
| MS.gene42872.t1 | AT5G51760 | 33.168 | 202 | 108 | 6 | 154 | 343 | 185 | 371 | 2.56e-17 | 84.0 |
| MS.gene42872.t1 | AT2G40180 | 27.619 | 315 | 165 | 11 | 60 | 366 | 128 | 387 | 4.29e-17 | 83.2 |
| MS.gene42872.t1 | AT3G62260 | 28.452 | 239 | 123 | 7 | 91 | 324 | 27 | 222 | 5.41e-17 | 81.6 |
| MS.gene42872.t1 | AT1G78200 | 32.597 | 181 | 108 | 5 | 164 | 343 | 56 | 223 | 6.90e-17 | 80.1 |
| MS.gene42872.t1 | AT1G78200 | 32.597 | 181 | 108 | 5 | 164 | 343 | 56 | 223 | 6.90e-17 | 80.1 |
| MS.gene42872.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 167 | 343 | 104 | 268 | 8.77e-17 | 80.9 |
| MS.gene42872.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 167 | 343 | 104 | 268 | 8.77e-17 | 80.9 |
| MS.gene42872.t1 | AT1G78200 | 33.146 | 178 | 105 | 5 | 167 | 343 | 104 | 268 | 8.77e-17 | 80.9 |
| MS.gene42872.t1 | AT2G29380 | 35.165 | 182 | 77 | 9 | 161 | 323 | 150 | 309 | 8.99e-17 | 82.0 |
| MS.gene42872.t1 | AT3G62260 | 28.452 | 239 | 123 | 7 | 91 | 324 | 117 | 312 | 1.25e-16 | 81.6 |
| MS.gene42872.t1 | AT3G62260 | 28.452 | 239 | 123 | 7 | 91 | 324 | 116 | 311 | 1.37e-16 | 81.6 |
| MS.gene42872.t1 | AT2G20630 | 28.800 | 250 | 125 | 10 | 94 | 342 | 66 | 263 | 4.42e-16 | 78.6 |
| MS.gene42872.t1 | AT2G25620 | 26.974 | 304 | 155 | 11 | 75 | 368 | 114 | 360 | 4.93e-16 | 80.1 |
| MS.gene42872.t1 | AT2G25620 | 26.974 | 304 | 155 | 11 | 75 | 368 | 114 | 360 | 4.93e-16 | 80.1 |
| MS.gene42872.t1 | AT1G07160 | 27.481 | 262 | 140 | 8 | 62 | 323 | 124 | 335 | 9.21e-16 | 79.0 |
| MS.gene42872.t1 | AT2G20630 | 28.800 | 250 | 125 | 10 | 94 | 342 | 66 | 263 | 9.50e-16 | 77.8 |
| MS.gene42872.t1 | AT1G18030 | 27.650 | 217 | 122 | 5 | 164 | 364 | 151 | 348 | 2.66e-15 | 77.4 |
| MS.gene42872.t1 | AT5G53140 | 27.203 | 261 | 129 | 10 | 87 | 341 | 126 | 331 | 3.74e-15 | 77.4 |
| MS.gene42872.t1 | AT5G53140 | 27.203 | 261 | 129 | 10 | 87 | 341 | 126 | 331 | 3.74e-15 | 77.4 |
| MS.gene42872.t1 | AT1G48040 | 28.745 | 247 | 125 | 7 | 91 | 330 | 116 | 318 | 5.23e-15 | 77.0 |
| MS.gene42872.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 188 | 343 | 126 | 267 | 2.08e-14 | 73.9 |
| MS.gene42872.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 188 | 343 | 126 | 267 | 2.08e-14 | 73.9 |
| MS.gene42872.t1 | AT1G34750 | 36.709 | 158 | 82 | 6 | 188 | 343 | 126 | 267 | 2.08e-14 | 73.9 |
| MS.gene42872.t1 | AT2G30020 | 27.099 | 262 | 141 | 10 | 62 | 323 | 141 | 352 | 3.05e-14 | 74.7 |
| MS.gene42872.t1 | AT2G40860 | 30.102 | 196 | 115 | 8 | 171 | 364 | 375 | 550 | 3.07e-14 | 75.1 |
| MS.gene42872.t1 | AT2G40860 | 32.258 | 155 | 91 | 5 | 171 | 324 | 473 | 614 | 4.74e-14 | 74.7 |
| MS.gene42872.t1 | AT2G40860 | 32.258 | 155 | 91 | 5 | 171 | 324 | 473 | 614 | 6.33e-14 | 74.3 |
| MS.gene42872.t1 | AT2G34740 | 31.953 | 169 | 98 | 7 | 167 | 334 | 173 | 325 | 2.24e-13 | 71.2 |
| MS.gene42872.t1 | AT2G34740 | 31.953 | 169 | 98 | 7 | 167 | 334 | 155 | 307 | 2.51e-13 | 70.9 |
| MS.gene42872.t1 | AT3G15260 | 35.256 | 156 | 85 | 6 | 188 | 342 | 133 | 273 | 3.82e-13 | 70.1 |
| MS.gene42872.t1 | AT3G15260 | 35.256 | 156 | 85 | 6 | 188 | 342 | 133 | 273 | 3.82e-13 | 70.1 |
| MS.gene42872.t1 | AT4G31860 | 32.192 | 146 | 74 | 4 | 187 | 324 | 159 | 287 | 7.02e-13 | 69.3 |
| MS.gene42872.t1 | AT4G31860 | 29.268 | 164 | 91 | 4 | 187 | 342 | 159 | 305 | 9.51e-13 | 69.7 |
| MS.gene42872.t1 | AT1G22280 | 35.669 | 157 | 85 | 6 | 188 | 343 | 131 | 272 | 1.01e-12 | 68.9 |
| MS.gene42872.t1 | AT1G22280 | 35.669 | 157 | 85 | 6 | 188 | 343 | 125 | 266 | 1.01e-12 | 68.9 |
| MS.gene42872.t1 | AT3G51470 | 24.535 | 269 | 141 | 10 | 64 | 324 | 76 | 290 | 3.82e-12 | 67.8 |
| MS.gene42872.t1 | AT3G51470 | 24.535 | 269 | 141 | 10 | 64 | 324 | 32 | 246 | 5.00e-12 | 67.0 |
| MS.gene42872.t1 | AT1G18030 | 28.221 | 163 | 92 | 3 | 164 | 314 | 151 | 300 | 8.52e-12 | 66.2 |
| MS.gene42872.t1 | AT2G25070 | 30.909 | 165 | 87 | 6 | 187 | 342 | 159 | 305 | 9.55e-12 | 66.6 |
| MS.gene42872.t1 | AT2G25070 | 30.909 | 165 | 87 | 6 | 187 | 342 | 159 | 305 | 9.55e-12 | 66.6 |
| MS.gene42872.t1 | AT1G34750 | 37.681 | 138 | 66 | 7 | 188 | 323 | 126 | 245 | 4.80e-11 | 63.2 |
Find 90 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTGATAGTTGGAAATT+TGG | 0.206532 | 7.2:+32970387 | MS.gene42872:CDS |
| TTTGCTGCTGTCGACTTTCT+TGG | 0.213044 | 7.2:-32971276 | None:intergenic |
| GCAAGATGAATTTGTTGTTT+TGG | 0.234194 | 7.2:+32970776 | MS.gene42872:CDS |
| CAATCATCTAAGCACCTTAA+TGG | 0.234478 | 7.2:+32971609 | MS.gene42872:CDS |
| AATGCCTTCAACTTCCATTA+AGG | 0.307538 | 7.2:-32971623 | None:intergenic |
| CAGTTGATAGTTGGAAATTT+GGG | 0.326425 | 7.2:+32970388 | MS.gene42872:CDS |
| ACCAAGATTCAATGACAGTT+TGG | 0.327013 | 7.2:+32969318 | MS.gene42872:CDS |
| AACCGGATGTATACAGAATA+TGG | 0.329139 | 7.2:+32970640 | MS.gene42872:CDS |
| TCTGAAATCCTTTGATGAAA+TGG | 0.334836 | 7.2:+32970099 | MS.gene42872:CDS |
| ACTATCTGAAGCAATCAAAA+TGG | 0.340437 | 7.2:+32969952 | MS.gene42872:CDS |
| CCCAAACTGTCATTGAATCT+TGG | 0.361120 | 7.2:-32969319 | None:intergenic |
| GATTGAGAATGTGATAAAAT+AGG | 0.372960 | 7.2:-32971396 | None:intergenic |
| CTAGCTATGTCAAGAGCCTT+TGG | 0.377892 | 7.2:+32970687 | MS.gene42872:CDS |
| CCAAGATTCAATGACAGTTT+GGG | 0.379856 | 7.2:+32969319 | MS.gene42872:CDS |
| AGCTGTAGCTTTAATTAAAC+AGG | 0.381379 | 7.2:+32970174 | MS.gene42872:CDS |
| ACAACATATCCCTTGCTTCA+TGG | 0.386921 | 7.2:+32970065 | MS.gene42872:CDS |
| CAATACTTACTTGGAATATC+CGG | 0.392328 | 7.2:-32970484 | None:intergenic |
| GGAGCAATGGTTAGATTAAG+AGG | 0.393042 | 7.2:+32969245 | MS.gene42872:CDS |
| AGCCACGATGTTGCTCTTAG+AGG | 0.393147 | 7.2:+32969116 | MS.gene42872:CDS |
| AAATCAACGGTAAGTTGAAC+AGG | 0.405496 | 7.2:-32970457 | None:intergenic |
| GAAGACAACGAAACTGTTGC+TGG | 0.408284 | 7.2:+32971480 | MS.gene42872:CDS |
| GTCTTCTGTGGCGTGTTTGA+CGG | 0.416167 | 7.2:+32969872 | MS.gene42872:CDS |
| CTCATATTTCTAGCAAGCCT+TGG | 0.424591 | 7.2:-32971579 | None:intergenic |
| AACAACAAATTCATCTTGCT+TGG | 0.431974 | 7.2:-32970772 | None:intergenic |
| ACTTACCGTTGATTTGAAAC+CGG | 0.436160 | 7.2:+32970465 | MS.gene42872:CDS |
| ATTAGCATCATAGTATTTGT+TGG | 0.436523 | 7.2:-32969987 | None:intergenic |
| CAACATATCCCTTGCTTCAT+GGG | 0.437188 | 7.2:+32970066 | MS.gene42872:CDS |
| CAGGACTATGCTGGAGAAGA+AGG | 0.456514 | 7.2:+32969845 | MS.gene42872:intron |
| TAGGGTGACCAGTTGATAGT+TGG | 0.459633 | 7.2:+32970379 | MS.gene42872:intron |
| CCAAATTTCCAACTATCAAC+TGG | 0.463615 | 7.2:-32970387 | None:intergenic |
| GAAACTGTTGCTGGAAAAGT+TGG | 0.466399 | 7.2:+32971489 | MS.gene42872:CDS |
| GCCTGGATGTATAAGTATCC+TGG | 0.473714 | 7.2:+32971324 | MS.gene42872:CDS |
| TTTCGCTGCAGACGAAGAAC+CGG | 0.478382 | 7.2:+32970623 | MS.gene42872:CDS |
| ATTATCAAGAAACAAGCATA+TGG | 0.479660 | 7.2:-32971370 | None:intergenic |
| GAAGAATGGAAAGCTCTTGA+AGG | 0.479840 | 7.2:+32971525 | MS.gene42872:CDS |
| GAATCTTTAGCTGTGAAGGA+AGG | 0.481881 | 7.2:+32970598 | MS.gene42872:CDS |
| CTCGTGCAGTTCTTTGCACA+AGG | 0.487423 | 7.2:+32970416 | MS.gene42872:CDS |
| ATCCATATTCTGTATACATC+CGG | 0.490554 | 7.2:-32970642 | None:intergenic |
| ATGCCTGATGATGACTGTCC+TGG | 0.497294 | 7.2:+32970663 | MS.gene42872:CDS |
| AGTCCAGGACAGTCATCATC+AGG | 0.497520 | 7.2:-32970666 | None:intergenic |
| TGGAAAAGTTGGAGTGGAAC+TGG | 0.501997 | 7.2:+32971500 | MS.gene42872:CDS |
| TCAAGAATCTTTAGCTGTGA+AGG | 0.508129 | 7.2:+32970594 | MS.gene42872:CDS |
| TGTGGCGTGTTTGACGGTCA+TGG | 0.512054 | 7.2:+32969878 | MS.gene42872:CDS |
| ATGATCATCCATTTCATCAA+AGG | 0.515206 | 7.2:-32970107 | None:intergenic |
| GTTGAAACCGAGGTGAATGA+TGG | 0.518422 | 7.2:+32969152 | MS.gene42872:CDS |
| AAATGGATGATCATCTTGCT+CGG | 0.523245 | 7.2:+32970116 | MS.gene42872:CDS |
| GTGGACATCGTCAAAATTGT+CGG | 0.525195 | 7.2:-32970020 | None:intergenic |
| ATATATTATCAGGACTATGC+TGG | 0.527095 | 7.2:+32969836 | MS.gene42872:intron |
| TAAAGCGTGCTGTTAAAGCC+TGG | 0.527207 | 7.2:+32971307 | MS.gene42872:CDS |
| TTTGACGGTCATGGTCCTCT+AGG | 0.530863 | 7.2:+32969887 | MS.gene42872:CDS |
| GAGCAATGGTTAGATTAAGA+GGG | 0.539562 | 7.2:+32969246 | MS.gene42872:CDS |
| AGCACCTTAATGGAAGTTGA+AGG | 0.541332 | 7.2:+32971619 | MS.gene42872:CDS |
| ATTCAATATCAAAACTTCCA+AGG | 0.542466 | 7.2:+32971562 | MS.gene42872:CDS |
| AACATCCTTCCCATGAAGCA+AGG | 0.545861 | 7.2:-32970075 | None:intergenic |
| AATCTTTAGCTGTGAAGGAA+GGG | 0.549092 | 7.2:+32970599 | MS.gene42872:CDS |
| GATTGCTTCAGATAGTTTCG+AGG | 0.550025 | 7.2:-32969945 | None:intergenic |
| ATATCCCTTGCTTCATGGGA+AGG | 0.553019 | 7.2:+32970070 | MS.gene42872:CDS |
| GAGTGGAACTGGATGAAGAA+TGG | 0.555708 | 7.2:+32971511 | MS.gene42872:CDS |
| GTTGCTCTTAGAGGAGGAGG+AGG | 0.558281 | 7.2:+32969125 | MS.gene42872:CDS |
| TCCAGGATACTTATACATCC+AGG | 0.559238 | 7.2:-32971325 | None:intergenic |
| AATGGATGATCATCTTGCTC+GGG | 0.566783 | 7.2:+32970117 | MS.gene42872:CDS |
| TATACACAACAAGGTATGAA+AGG | 0.568417 | 7.2:+32969290 | MS.gene42872:CDS |
| AATATCCGGTTTCAAATCAA+CGG | 0.569234 | 7.2:-32970470 | None:intergenic |
| GCTCTTGACATAGCTAGTCC+AGG | 0.570855 | 7.2:-32970681 | None:intergenic |
| AATCAAAATGGCACAACAGA+AGG | 0.572079 | 7.2:+32969964 | MS.gene42872:CDS |
| TGATGCGGTGGTTACTATTG+TGG | 0.576713 | 7.2:-32970042 | None:intergenic |
| GCTGTCACGTATCAAAATGA+TGG | 0.579947 | 7.2:+32969224 | MS.gene42872:CDS |
| AAGAATGGAAAGCTCTTGAA+GGG | 0.594451 | 7.2:+32971526 | MS.gene42872:CDS |
| AGGAGGCAGAGTTGAAACCG+AGG | 0.596046 | 7.2:+32969142 | MS.gene42872:CDS |
| GTATCAAAATGATGGAGCAA+TGG | 0.597945 | 7.2:+32969232 | MS.gene42872:CDS |
| GATGTTGCTCTTAGAGGAGG+AGG | 0.599534 | 7.2:+32969122 | MS.gene42872:CDS |
| TGCGGTGGTTACTATTGTGG+TGG | 0.606138 | 7.2:-32970039 | None:intergenic |
| GCAACCACTGCAATAGCTAT+CGG | 0.611121 | 7.2:-32970149 | None:intergenic |
| CACGATGTTGCTCTTAGAGG+AGG | 0.613102 | 7.2:+32969119 | MS.gene42872:CDS |
| ACATCCTTCCCATGAAGCAA+GGG | 0.615226 | 7.2:-32970074 | None:intergenic |
| ATTGCTTCAGATAGTTTCGA+GGG | 0.615251 | 7.2:-32969944 | None:intergenic |
| CTATGCTGGAGAAGAAGGCA+TGG | 0.621989 | 7.2:+32969850 | MS.gene42872:CDS |
| GGGATATGTTGTTGATGCGG+TGG | 0.623925 | 7.2:-32970054 | None:intergenic |
| AGATTCAATGACAGTTTGGG+AGG | 0.625524 | 7.2:+32969322 | MS.gene42872:CDS |
| TCGTGCAGTTCTTTGCACAA+GGG | 0.632091 | 7.2:+32970417 | MS.gene42872:CDS |
| ATATTCTCCATCATTCACCT+CGG | 0.635736 | 7.2:-32969159 | None:intergenic |
| ACACATCTGGTGATGCAATG+AGG | 0.636186 | 7.2:-32970734 | None:intergenic |
| GAAGAAGGCATGGTCTTCTG+TGG | 0.636280 | 7.2:+32969860 | MS.gene42872:CDS |
| TGCGAAACTTTGTGTCCTAG+AGG | 0.636288 | 7.2:-32969902 | None:intergenic |
| GTTTCAATGTATACACAACA+AGG | 0.640908 | 7.2:+32969281 | MS.gene42872:CDS |
| TGTTGCTGGAAAAGTTGGAG+TGG | 0.662878 | 7.2:+32971494 | MS.gene42872:CDS |
| AACACCGATAGCTATTGCAG+TGG | 0.665419 | 7.2:+32970145 | MS.gene42872:CDS |
| CAAGGGATATGTTGTTGATG+CGG | 0.682862 | 7.2:-32970057 | None:intergenic |
| CTCCTCTAAGAGCAACATCG+TGG | 0.712569 | 7.2:-32969118 | None:intergenic |
| TGTCTTCCAAGAAACATGGG+TGG | 0.731949 | 7.2:+32969086 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTGTAAAAAAAAAATAA+AGG | - | chr7.2:32971208-32971227 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTACAGATAT+GGG | + | chr7.2:32971209-32971228 | MS.gene42872:intron | 10.0% |
| !!! | TTATTTTTTTTTTACAGATA+TGG | + | chr7.2:32971208-32971227 | MS.gene42872:intron | 10.0% |
| !! | AAAAAAAAAATAAAGGATAC+CGG | - | chr7.2:32971201-32971220 | None:intergenic | 15.0% |
| !! | AATGATTAATCAAATTGAAA+TGG | - | chr7.2:32969519-32969538 | None:intergenic | 15.0% |
| !! | AATTATGTGATTTAATCTTA+TGG | + | chr7.2:32969736-32969755 | MS.gene42872:intron | 15.0% |
| !! | CAAAAATTCATCAAAATTAA+TGG | - | chr7.2:32969419-32969438 | None:intergenic | 15.0% |
| !! | AACCTTAAAATTAAAGATCA+AGG | - | chr7.2:32970843-32970862 | None:intergenic | 20.0% |
| !! | AATCTTGACAATTACATTAT+TGG | - | chr7.2:32969593-32969612 | None:intergenic | 20.0% |
| !! | ACCTTAAAATTAAAGATCAA+GGG | - | chr7.2:32970842-32970861 | None:intergenic | 20.0% |
| !! | ATAATATTCGCAATTACATA+AGG | + | chr7.2:32970216-32970235 | MS.gene42872:intron | 20.0% |
| !! | TAACATAACAATTATGTATC+CGG | - | chr7.2:32971109-32971128 | None:intergenic | 20.0% |
| !! | TGGACTTTATTATTAGATTA+TGG | + | chr7.2:32969756-32969775 | MS.gene42872:intron | 20.0% |
| !!! | TAATTTTATCAACGTTTTTC+AGG | + | chr7.2:32970564-32970583 | MS.gene42872:intron | 20.0% |
| !!! | TTCAATGTAATTTTATGTGT+CGG | + | chr7.2:32970977-32970996 | MS.gene42872:intron | 20.0% |
| !!! | TTTTGATGAATTTTTGTTCT+TGG | + | chr7.2:32969423-32969442 | MS.gene42872:intron | 20.0% |
| !!! | TTTTTTCAATCAAATCTTGT+GGG | + | chr7.2:32969460-32969479 | MS.gene42872:intron | 20.0% |
| !!! | TTTTTTTCAATCAAATCTTG+TGG | + | chr7.2:32969459-32969478 | MS.gene42872:intron | 20.0% |
| ! | AAATTACAACTAGATCTGAT+AGG | - | chr7.2:32970550-32970569 | None:intergenic | 25.0% |
| ! | AATTGATGAAATGTAACATG+TGG | + | chr7.2:32969790-32969809 | MS.gene42872:intron | 25.0% |
| ! | ATTAGCATCATAGTATTTGT+TGG | - | chr7.2:32969990-32970009 | None:intergenic | 25.0% |
| ! | ATTATCAAGAAACAAGCATA+TGG | - | chr7.2:32971373-32971392 | None:intergenic | 25.0% |
| ! | ATTCAATATCAAAACTTCCA+AGG | + | chr7.2:32971562-32971581 | MS.gene42872:CDS | 25.0% |
| ! | CATAATTCTATGATTATTGC+TGG | - | chr7.2:32969723-32969742 | None:intergenic | 25.0% |
| ! | GATTGAGAATGTGATAAAAT+AGG | - | chr7.2:32971399-32971418 | None:intergenic | 25.0% |
| ! | TGGATATGCTATATATTATC+AGG | + | chr7.2:32969826-32969845 | MS.gene42872:intron | 25.0% |
| ! | TTACATAAGGTAAGAAATCA+CGG | + | chr7.2:32970229-32970248 | MS.gene42872:intron | 25.0% |
| ! | TTGATATACCAATACTTACT+TGG | - | chr7.2:32970496-32970515 | None:intergenic | 25.0% |
| !! | ATTTTTCTGTAAAACACATC+TGG | - | chr7.2:32970750-32970769 | None:intergenic | 25.0% |
| !! | CTTTTACCCTATAAATTGTA+GGG | + | chr7.2:32970361-32970380 | MS.gene42872:intron | 25.0% |
| !! | GACTTTTGTCTAAAAGATTA+TGG | + | chr7.2:32970711-32970730 | MS.gene42872:CDS | 25.0% |
| !!! | ACCCTTGATCTTTAATTTTA+AGG | + | chr7.2:32970838-32970857 | MS.gene42872:intron | 25.0% |
| !!! | ATTTTAGTAGTAACTCCTAA+AGG | - | chr7.2:32969648-32969667 | None:intergenic | 25.0% |
| !!! | TCTAAATTTTTTAGCTGTGT+CGG | - | chr7.2:32970946-32970965 | None:intergenic | 25.0% |
| AACAACAAATTCATCTTGCT+TGG | - | chr7.2:32970775-32970794 | None:intergenic | 30.0% | |
| AATATCCGGTTTCAAATCAA+CGG | - | chr7.2:32970473-32970492 | None:intergenic | 30.0% | |
| ATATATTATCAGGACTATGC+TGG | + | chr7.2:32969836-32969855 | MS.gene42872:intron | 30.0% | |
| ATCCATATTCTGTATACATC+CGG | - | chr7.2:32970645-32970664 | None:intergenic | 30.0% | |
| ATGATCATCCATTTCATCAA+AGG | - | chr7.2:32970110-32970129 | None:intergenic | 30.0% | |
| CAACCATTTATGATACCTTT+AGG | + | chr7.2:32969630-32969649 | MS.gene42872:intron | 30.0% | |
| CAATACTTACTTGGAATATC+CGG | - | chr7.2:32970487-32970506 | None:intergenic | 30.0% | |
| GCGAATATTATCTAGTTACA+CGG | - | chr7.2:32970207-32970226 | None:intergenic | 30.0% | |
| GTTTCAATGTATACACAACA+AGG | + | chr7.2:32969281-32969300 | MS.gene42872:CDS | 30.0% | |
| TATACACAACAAGGTATGAA+AGG | + | chr7.2:32969290-32969309 | MS.gene42872:CDS | 30.0% | |
| TCTCTTTCTTAAAACACGTT+CGG | + | chr7.2:32971156-32971175 | MS.gene42872:intron | 30.0% | |
| TTATGTATCCGGATAAAGAA+AGG | - | chr7.2:32971098-32971117 | None:intergenic | 30.0% | |
| TTTCAATAAGCAATGAAGCA+CGG | - | chr7.2:32971055-32971074 | None:intergenic | 30.0% | |
| ! | ACTATCTGAAGCAATCAAAA+TGG | + | chr7.2:32969952-32969971 | MS.gene42872:CDS | 30.0% |
| ! | GATGAATTTTTGTTCTTGGT+TGG | + | chr7.2:32969427-32969446 | MS.gene42872:intron | 30.0% |
| ! | GCTTTTACCCTATAAATTGT+AGG | + | chr7.2:32970360-32970379 | MS.gene42872:intron | 30.0% |
| ! | TACTTATTGACTATGAAGCA+CGG | + | chr7.2:32970879-32970898 | MS.gene42872:intron | 30.0% |
| ! | TCTGAAATCCTTTGATGAAA+TGG | + | chr7.2:32970099-32970118 | MS.gene42872:CDS | 30.0% |
| ! | TTTTAGACAAAAGTCTCCAA+AGG | - | chr7.2:32970706-32970725 | None:intergenic | 30.0% |
| !! | ACTCCTAAAGGTATCATAAA+TGG | - | chr7.2:32969636-32969655 | None:intergenic | 30.0% |
| !! | AGCTGTAGCTTTAATTAAAC+AGG | + | chr7.2:32970174-32970193 | MS.gene42872:CDS | 30.0% |
| !! | CAGTTGATAGTTGGAAATTT+GGG | + | chr7.2:32970388-32970407 | MS.gene42872:CDS | 30.0% |
| !!! | GCAAGATGAATTTGTTGTTT+TGG | + | chr7.2:32970776-32970795 | MS.gene42872:CDS | 30.0% |
| AAATGGATGATCATCTTGCT+CGG | + | chr7.2:32970116-32970135 | MS.gene42872:CDS | 35.0% | |
| AACCGGATGTATACAGAATA+TGG | + | chr7.2:32970640-32970659 | MS.gene42872:CDS | 35.0% | |
| AAGAATGGAAAGCTCTTGAA+GGG | + | chr7.2:32971526-32971545 | MS.gene42872:CDS | 35.0% | |
| AATCAAAATGGCACAACAGA+AGG | + | chr7.2:32969964-32969983 | MS.gene42872:CDS | 35.0% | |
| AATCTTTAGCTGTGAAGGAA+GGG | + | chr7.2:32970599-32970618 | MS.gene42872:CDS | 35.0% | |
| ACCAAGATTCAATGACAGTT+TGG | + | chr7.2:32969318-32969337 | MS.gene42872:CDS | 35.0% | |
| ACTCTGATCCTTTCTTTATC+CGG | + | chr7.2:32971087-32971106 | MS.gene42872:intron | 35.0% | |
| ATATTCTCCATCATTCACCT+CGG | - | chr7.2:32969162-32969181 | None:intergenic | 35.0% | |
| ATTGCTTCAGATAGTTTCGA+GGG | - | chr7.2:32969947-32969966 | None:intergenic | 35.0% | |
| CAATCATCTAAGCACCTTAA+TGG | + | chr7.2:32971609-32971628 | MS.gene42872:CDS | 35.0% | |
| CATGTGGCTATGATTAATGT+TGG | + | chr7.2:32969806-32969825 | MS.gene42872:intron | 35.0% | |
| CCAAATTTCCAACTATCAAC+TGG | - | chr7.2:32970390-32970409 | None:intergenic | 35.0% | |
| CCAAGATTCAATGACAGTTT+GGG | + | chr7.2:32969319-32969338 | MS.gene42872:CDS | 35.0% | |
| CGGATATTCCAAGTAAGTAT+TGG | + | chr7.2:32970485-32970504 | MS.gene42872:intron | 35.0% | |
| GAGCAATGGTTAGATTAAGA+GGG | + | chr7.2:32969246-32969265 | MS.gene42872:CDS | 35.0% | |
| TCAAGAATCTTTAGCTGTGA+AGG | + | chr7.2:32970594-32970613 | MS.gene42872:CDS | 35.0% | |
| TGGTCACCCTACAATTTATA+GGG | - | chr7.2:32970370-32970389 | None:intergenic | 35.0% | |
| TTAAGAAAGAGATCCATGCA+TGG | - | chr7.2:32971148-32971167 | None:intergenic | 35.0% | |
| ! | AAATCAACGGTAAGTTGAAC+AGG | - | chr7.2:32970460-32970479 | None:intergenic | 35.0% |
| ! | CTTCATTGATAGCATTCTCT+TGG | + | chr7.2:32969669-32969688 | MS.gene42872:intron | 35.0% |
| ! | GTATCAAAATGATGGAGCAA+TGG | + | chr7.2:32969232-32969251 | MS.gene42872:CDS | 35.0% |
| !! | ACTTACCGTTGATTTGAAAC+CGG | + | chr7.2:32970465-32970484 | MS.gene42872:CDS | 35.0% |
| !! | CCAGTTGATAGTTGGAAATT+TGG | + | chr7.2:32970387-32970406 | MS.gene42872:CDS | 35.0% |
| !!! | TTGTTGTTTTGGCAACTGAT+GGG | + | chr7.2:32970787-32970806 | MS.gene42872:CDS | 35.0% |
| !!! | TTTGTTGTTTTGGCAACTGA+TGG | + | chr7.2:32970786-32970805 | MS.gene42872:CDS | 35.0% |
| AATGGATGATCATCTTGCTC+GGG | + | chr7.2:32970117-32970136 | MS.gene42872:CDS | 40.0% | |
| ACAACATATCCCTTGCTTCA+TGG | + | chr7.2:32970065-32970084 | MS.gene42872:CDS | 40.0% | |
| AGATTCAATGACAGTTTGGG+AGG | + | chr7.2:32969322-32969341 | MS.gene42872:CDS | 40.0% | |
| CAACATATCCCTTGCTTCAT+GGG | + | chr7.2:32970066-32970085 | MS.gene42872:CDS | 40.0% | |
| CAAGGGATATGTTGTTGATG+CGG | - | chr7.2:32970060-32970079 | None:intergenic | 40.0% | |
| CCCAAACTGTCATTGAATCT+TGG | - | chr7.2:32969322-32969341 | None:intergenic | 40.0% | |
| CTGGTCACCCTACAATTTAT+AGG | - | chr7.2:32970371-32970390 | None:intergenic | 40.0% | |
| GAAACTGTTGCTGGAAAAGT+TGG | + | chr7.2:32971489-32971508 | MS.gene42872:CDS | 40.0% | |
| GAAGAATGGAAAGCTCTTGA+AGG | + | chr7.2:32971525-32971544 | MS.gene42872:CDS | 40.0% | |
| GAATCTTTAGCTGTGAAGGA+AGG | + | chr7.2:32970598-32970617 | MS.gene42872:CDS | 40.0% | |
| GATTGCTTCAGATAGTTTCG+AGG | - | chr7.2:32969948-32969967 | None:intergenic | 40.0% | |
| GCTGTCACGTATCAAAATGA+TGG | + | chr7.2:32969224-32969243 | MS.gene42872:CDS | 40.0% | |
| GGAGCAATGGTTAGATTAAG+AGG | + | chr7.2:32969245-32969264 | MS.gene42872:CDS | 40.0% | |
| GTGGACATCGTCAAAATTGT+CGG | - | chr7.2:32970023-32970042 | None:intergenic | 40.0% | |
| TCCAGGATACTTATACATCC+AGG | - | chr7.2:32971328-32971347 | None:intergenic | 40.0% | |
| TGTCTGTTAGCTCACAAAAC+CGG | + | chr7.2:32971179-32971198 | MS.gene42872:intron | 40.0% | |
| TTGACTATGAAGCACGGATA+CGG | + | chr7.2:32970885-32970904 | MS.gene42872:intron | 40.0% | |
| TTGCTGGAATCATACAGCTA+AGG | - | chr7.2:32969707-32969726 | None:intergenic | 40.0% | |
| ! | TTTAGAGTTCGAACCATGCA+TGG | + | chr7.2:32971132-32971151 | MS.gene42872:intron | 40.0% |
| !! | CTCATATTTCTAGCAAGCCT+TGG | - | chr7.2:32971582-32971601 | None:intergenic | 40.0% |
| !!! | TGTTGTTTTGGCAACTGATG+GGG | + | chr7.2:32970788-32970807 | MS.gene42872:CDS | 40.0% |
| AACACCGATAGCTATTGCAG+TGG | + | chr7.2:32970145-32970164 | MS.gene42872:CDS | 45.0% | |
| AACATCCTTCCCATGAAGCA+AGG | - | chr7.2:32970078-32970097 | None:intergenic | 45.0% | |
| ACATCCTTCCCATGAAGCAA+GGG | - | chr7.2:32970077-32970096 | None:intergenic | 45.0% | |
| ACATGACACGTGTCTGACAT+GGG | + | chr7.2:32971006-32971025 | MS.gene42872:intron | 45.0% | |
| ATATCCCTTGCTTCATGGGA+AGG | + | chr7.2:32970070-32970089 | MS.gene42872:CDS | 45.0% | |
| CTAGCTATGTCAAGAGCCTT+TGG | + | chr7.2:32970687-32970706 | MS.gene42872:CDS | 45.0% | |
| GAAGACAACGAAACTGTTGC+TGG | + | chr7.2:32971480-32971499 | MS.gene42872:CDS | 45.0% | |
| GAGTGGAACTGGATGAAGAA+TGG | + | chr7.2:32971511-32971530 | MS.gene42872:CDS | 45.0% | |
| GCAACCACTGCAATAGCTAT+CGG | - | chr7.2:32970152-32970171 | None:intergenic | 45.0% | |
| GCCTGGATGTATAAGTATCC+TGG | + | chr7.2:32971324-32971343 | MS.gene42872:CDS | 45.0% | |
| GTTGAAACCGAGGTGAATGA+TGG | + | chr7.2:32969152-32969171 | MS.gene42872:CDS | 45.0% | |
| TCGTGCAGTTCTTTGCACAA+GGG | + | chr7.2:32970417-32970436 | MS.gene42872:CDS | 45.0% | |
| TGATGCGGTGGTTACTATTG+TGG | - | chr7.2:32970045-32970064 | None:intergenic | 45.0% | |
| TGCGAAACTTTGTGTCCTAG+AGG | - | chr7.2:32969905-32969924 | None:intergenic | 45.0% | |
| TGGAAAAGTTGGAGTGGAAC+TGG | + | chr7.2:32971500-32971519 | MS.gene42872:CDS | 45.0% | |
| TGTTGCTGGAAAAGTTGGAG+TGG | + | chr7.2:32971494-32971513 | MS.gene42872:CDS | 45.0% | |
| ! | ACACATCTGGTGATGCAATG+AGG | - | chr7.2:32970737-32970756 | None:intergenic | 45.0% |
| ! | TAAAGCGTGCTGTTAAAGCC+TGG | + | chr7.2:32971307-32971326 | MS.gene42872:CDS | 45.0% |
| !! | TAGGGTGACCAGTTGATAGT+TGG | + | chr7.2:32970379-32970398 | MS.gene42872:intron | 45.0% |
| !! | TTTGCTGCTGTCGACTTTCT+TGG | - | chr7.2:32971279-32971298 | None:intergenic | 45.0% |
| !!! | CAATCGTCGATTTTCGATCC+AGG | - | chr7.2:32971345-32971364 | None:intergenic | 45.0% |
| AATGAAGCACGGAGACTCCT+GGG | - | chr7.2:32971044-32971063 | None:intergenic | 50.0% | |
| AGCCACGATGTTGCTCTTAG+AGG | + | chr7.2:32969116-32969135 | MS.gene42872:CDS | 50.0% | |
| AGTCCAGGACAGTCATCATC+AGG | - | chr7.2:32970669-32970688 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+TGG | + | chr7.2:32970891-32970910 | MS.gene42872:intron | 50.0% | |
| CACGATGTTGCTCTTAGAGG+AGG | + | chr7.2:32969119-32969138 | MS.gene42872:CDS | 50.0% | |
| CAGGACTATGCTGGAGAAGA+AGG | + | chr7.2:32969845-32969864 | MS.gene42872:intron | 50.0% | |
| CATGACACGTGTCTGACATG+GGG | + | chr7.2:32971007-32971026 | MS.gene42872:intron | 50.0% | |
| CTATGCTGGAGAAGAAGGCA+TGG | + | chr7.2:32969850-32969869 | MS.gene42872:CDS | 50.0% | |
| CTCGTGCAGTTCTTTGCACA+AGG | + | chr7.2:32970416-32970435 | MS.gene42872:CDS | 50.0% | |
| GACATGACACGTGTCTGACA+TGG | + | chr7.2:32971005-32971024 | MS.gene42872:intron | 50.0% | |
| GATGTTGCTCTTAGAGGAGG+AGG | + | chr7.2:32969122-32969141 | MS.gene42872:CDS | 50.0% | |
| GCTCTTGACATAGCTAGTCC+AGG | - | chr7.2:32970684-32970703 | None:intergenic | 50.0% | |
| GGGATATGTTGTTGATGCGG+TGG | - | chr7.2:32970057-32970076 | None:intergenic | 50.0% | |
| GTCTTCTGTGGCGTGTTTGA+CGG | + | chr7.2:32969872-32969891 | MS.gene42872:CDS | 50.0% | |
| TGCGGTGGTTACTATTGTGG+TGG | - | chr7.2:32970042-32970061 | None:intergenic | 50.0% | |
| TGTCTCTGTGACTGCAGTTG+AGG | - | chr7.2:32970309-32970328 | None:intergenic | 50.0% | |
| TTTCGCTGCAGACGAAGAAC+CGG | + | chr7.2:32970623-32970642 | MS.gene42872:CDS | 50.0% | |
| TTTGACGGTCATGGTCCTCT+AGG | + | chr7.2:32969887-32969906 | MS.gene42872:CDS | 50.0% | |
| ! | ATGCCTGATGATGACTGTCC+TGG | + | chr7.2:32970663-32970682 | MS.gene42872:CDS | 50.0% |
| ! | CTCCTCTAAGAGCAACATCG+TGG | - | chr7.2:32969121-32969140 | None:intergenic | 50.0% |
| ! | GAAGAAGGCATGGTCTTCTG+TGG | + | chr7.2:32969860-32969879 | MS.gene42872:CDS | 50.0% |
| ACGGATACGGACATGGACAC+CGG | + | chr7.2:32970898-32970917 | MS.gene42872:intron | 55.0% | |
| AGGAGGCAGAGTTGAAACCG+AGG | + | chr7.2:32969142-32969161 | MS.gene42872:CDS | 55.0% | |
| CAATGAAGCACGGAGACTCC+TGG | - | chr7.2:32971045-32971064 | None:intergenic | 55.0% | |
| GTCAGTGTCTGTGTCGTGTC+CGG | - | chr7.2:32970920-32970939 | None:intergenic | 55.0% | |
| GTTGCTCTTAGAGGAGGAGG+AGG | + | chr7.2:32969125-32969144 | MS.gene42872:CDS | 55.0% | |
| TGTGGCGTGTTTGACGGTCA+TGG | + | chr7.2:32969878-32969897 | MS.gene42872:CDS | 55.0% | |
| ATGGGGACACGCCTTATCCC+AGG | + | chr7.2:32971024-32971043 | MS.gene42872:intron | 60.0% | |
| GCACGGAGACTCCTGGGATA+AGG | - | chr7.2:32971038-32971057 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 32969101 | 32971638 | 32969101 | ID=MS.gene42872 |
| chr7.2 | mRNA | 32969101 | 32971638 | 32969101 | ID=MS.gene42872.t1;Parent=MS.gene42872 |
| chr7.2 | exon | 32969101 | 32969343 | 32969101 | ID=MS.gene42872.t1.exon1;Parent=MS.gene42872.t1 |
| chr7.2 | CDS | 32969101 | 32969343 | 32969101 | ID=cds.MS.gene42872.t1;Parent=MS.gene42872.t1 |
| chr7.2 | exon | 32969848 | 32970195 | 32969848 | ID=MS.gene42872.t1.exon2;Parent=MS.gene42872.t1 |
| chr7.2 | CDS | 32969848 | 32970195 | 32969848 | ID=cds.MS.gene42872.t1;Parent=MS.gene42872.t1 |
| chr7.2 | exon | 32970382 | 32970496 | 32970382 | ID=MS.gene42872.t1.exon3;Parent=MS.gene42872.t1 |
| chr7.2 | CDS | 32970382 | 32970496 | 32970382 | ID=cds.MS.gene42872.t1;Parent=MS.gene42872.t1 |
| chr7.2 | exon | 32970586 | 32970809 | 32970586 | ID=MS.gene42872.t1.exon4;Parent=MS.gene42872.t1 |
| chr7.2 | CDS | 32970586 | 32970809 | 32970586 | ID=cds.MS.gene42872.t1;Parent=MS.gene42872.t1 |
| chr7.2 | exon | 32971225 | 32971638 | 32971225 | ID=MS.gene42872.t1.exon5;Parent=MS.gene42872.t1 |
| chr7.2 | CDS | 32971225 | 32971638 | 32971225 | ID=cds.MS.gene42872.t1;Parent=MS.gene42872.t1 |
| Gene Sequence |
| Protein sequence |
