AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43915

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43915.t1 MTR_5g035280 90.049 412 41 0 1 412 679 1090 0.0 739
MS.gene43915.t1 MTR_3g026660 65.865 416 142 0 1 416 666 1081 3.44e-178 526
MS.gene43915.t1 MTR_3g026660 65.865 416 142 0 1 416 723 1138 5.22e-178 528
MS.gene43915.t1 MTR_5g037450 59.574 423 166 3 1 422 689 1107 1.07e-155 469
MS.gene43915.t1 MTR_5g037500 61.995 421 112 2 1 421 617 989 3.13e-151 454
MS.gene43915.t1 MTR_5g035530 56.835 417 176 2 1 416 564 977 5.95e-150 451
MS.gene43915.t1 MTR_5g035240 70.270 296 88 0 1 296 677 972 7.46e-134 408
MS.gene43915.t1 MTR_5g040770 55.769 416 137 2 1 416 448 816 5.05e-131 397
MS.gene43915.t1 MTR_5g035200 57.009 321 136 2 1 320 18 337 8.16e-108 323
MS.gene43915.t1 MTR_5g035200 33.422 377 185 12 89 421 12 366 2.67e-36 137
MS.gene43915.t1 MTR_5g035480 47.202 411 135 5 1 410 667 996 4.63e-96 309
MS.gene43915.t1 MTR_3g086070 37.182 433 235 10 1 409 666 1085 1.61e-70 241
MS.gene43915.t1 MTR_0133s0020 36.219 439 226 9 1 409 674 1088 4.47e-69 237
MS.gene43915.t1 MTR_3g023320 37.584 447 233 14 1 416 669 1100 2.20e-68 235
MS.gene43915.t1 MTR_8g036195 37.838 444 235 12 1 416 651 1081 2.00e-65 226
MS.gene43915.t1 MTR_0256s0050 36.613 437 239 10 1 412 636 1059 2.27e-64 224
MS.gene43915.t1 MTR_6g052455 35.650 446 243 10 1 421 561 987 8.25e-64 221
MS.gene43915.t1 MTR_6g046750 35.545 422 255 11 2 412 21 436 9.85e-64 212
MS.gene43915.t1 MTR_6g046440 36.156 437 235 11 1 409 610 1030 1.95e-63 221
MS.gene43915.t1 MTR_6g046760 37.321 418 241 11 2 409 21 427 1.68e-62 209
MS.gene43915.t1 MTR_6g046620 36.364 440 226 12 1 416 619 1028 3.61e-62 217
MS.gene43915.t1 MTR_6g046130 36.322 435 221 10 1 409 665 1069 1.84e-61 215
MS.gene43915.t1 MTR_0511s0020 36.323 446 239 13 1 421 653 1078 3.76e-61 214
MS.gene43915.t1 MTR_6g047450 34.459 444 241 10 1 409 667 1095 4.03e-60 211
MS.gene43915.t1 MTR_6g046480 36.239 436 221 13 1 409 668 1073 1.75e-59 209
MS.gene43915.t1 MTR_6g052760 35.253 434 238 12 1 409 671 1086 4.41e-59 208
MS.gene43915.t1 MTR_4g055630 37.559 426 203 13 1 420 677 1045 5.07e-58 205
MS.gene43915.t1 MTR_0133s0030 36.136 440 233 12 1 409 666 1088 2.93e-57 203
MS.gene43915.t1 MTR_6g046930 34.163 442 254 11 1 416 664 1094 9.48e-56 199
MS.gene43915.t1 MTR_0144s0010 34.943 435 211 12 1 409 11 399 1.32e-55 190
MS.gene43915.t1 MTR_1g022380 36.715 414 178 14 1 409 669 1003 1.75e-55 197
MS.gene43915.t1 MTR_7g071940 36.842 418 183 13 1 414 666 1006 2.20e-55 197
MS.gene43915.t1 MTR_5g070960 35.407 418 185 11 1 412 676 1014 2.70e-54 194
MS.gene43915.t1 MTR_0230s0010 34.300 414 229 11 1 389 612 1007 3.58e-51 185
MS.gene43915.t1 MTR_5g071823 34.466 412 190 11 1 409 673 1007 3.91e-51 185
MS.gene43915.t1 MTR_5g071850 34.466 412 190 11 1 409 673 1007 3.91e-51 185
MS.gene43915.t1 MTR_5g071220 36.077 413 182 11 1 408 674 1009 4.21e-51 185
MS.gene43915.t1 MTR_5g071220 36.077 413 182 11 1 408 674 1009 6.18e-51 185
MS.gene43915.t1 MTR_5g071780 35.194 412 186 12 1 409 673 1006 9.33e-51 184
MS.gene43915.t1 MTR_1g023600 36.804 413 179 13 1 409 671 1005 3.39e-50 182
MS.gene43915.t1 MTR_6g046570 33.560 441 232 9 1 415 673 1078 6.57e-50 182
MS.gene43915.t1 MTR_5g072140 40.764 314 176 8 1 311 634 940 6.74e-50 181
MS.gene43915.t1 MTR_4g126000 33.254 418 197 12 1 415 538 876 7.10e-47 172
MS.gene43915.t1 MTR_5g071670 33.092 414 173 10 1 412 667 978 2.37e-46 171
MS.gene43915.t1 MTR_5g071670 39.474 152 84 6 1 148 1141 1288 6.28e-16 80.9
MS.gene43915.t1 MTR_5g071800 34.951 412 186 11 1 409 674 1006 5.40e-46 170
MS.gene43915.t1 MTR_5g071470 34.058 414 169 10 1 412 674 985 8.85e-46 169
MS.gene43915.t1 MTR_5g070490 34.058 414 169 11 1 412 671 982 1.46e-45 169
MS.gene43915.t1 MTR_5g072340 33.253 415 173 10 1 413 676 988 2.43e-45 168
MS.gene43915.t1 MTR_5g071310 33.741 409 167 11 1 407 641 947 4.28e-45 168
MS.gene43915.t1 MTR_5g037460 39.068 279 131 3 1 279 546 785 2.17e-44 165
MS.gene43915.t1 MTR_5g037460 35.174 344 172 10 86 416 497 802 4.69e-38 147
MS.gene43915.t1 MTR_5g034770 48.387 217 83 3 6 222 667 854 2.36e-43 162
MS.gene43915.t1 MTR_5g034770 66.038 106 36 0 305 410 768 873 9.83e-30 122
MS.gene43915.t1 MTR_6g046450 34.180 433 212 19 5 414 710 1092 7.55e-43 161
MS.gene43915.t1 MTR_6g046750 31.116 421 228 12 2 412 21 389 1.75e-42 154
MS.gene43915.t1 MTR_0144s0060 33.333 375 195 9 1 371 665 988 4.49e-40 153
MS.gene43915.t1 MTR_5g028610 31.250 432 245 16 2 410 669 1071 4.90e-40 153
MS.gene43915.t1 MTR_5g028340 30.303 429 265 14 2 415 671 1080 7.10e-40 152
MS.gene43915.t1 MTR_5g071570 38.235 272 158 8 1 268 675 940 1.39e-37 145
MS.gene43915.t1 MTR_5g035450 45.714 210 92 7 203 410 89 278 1.93e-36 138
MS.gene43915.t1 MTR_6g046550 33.735 332 176 6 102 409 339 650 7.45e-36 140
MS.gene43915.t1 MTR_5g028750 29.398 432 269 12 3 413 656 1072 4.51e-34 135
MS.gene43915.t1 MTR_5g028070 28.702 439 263 10 2 410 813 1231 6.15e-34 135
MS.gene43915.t1 MTR_5g070470 31.250 416 182 11 1 412 675 990 5.88e-32 129
MS.gene43915.t1 MTR_2g078070 29.545 440 234 17 2 414 697 1087 1.02e-31 128
MS.gene43915.t1 MTR_0137s0070 31.905 420 238 18 2 397 123 518 1.21e-31 127
MS.gene43915.t1 MTR_3g014080 31.905 420 238 18 2 397 705 1100 1.23e-31 128
MS.gene43915.t1 MTR_0137s0070 31.905 420 238 18 2 397 123 518 1.25e-31 127
MS.gene43915.t1 MTR_0137s0070 27.966 354 185 15 75 416 366 661 2.45e-12 69.3
MS.gene43915.t1 MTR_3g014080 31.905 420 238 18 2 397 705 1100 1.76e-31 127
MS.gene43915.t1 MTR_3g014080 28.045 353 184 15 75 415 948 1242 1.36e-12 70.5
MS.gene43915.t1 MTR_3g435210 29.425 435 252 14 31 420 516 940 1.19e-30 125
MS.gene43915.t1 MTR_5g028420 29.054 444 263 14 2 415 666 1087 6.15e-30 123
MS.gene43915.t1 MTR_5g028290 29.530 447 268 16 2 420 698 1125 7.18e-29 120
MS.gene43915.t1 MTR_4g019360 26.079 533 255 16 2 409 620 1138 8.63e-28 117
MS.gene43915.t1 MTR_3g007190 25.891 533 254 20 2 414 552 1063 2.97e-26 112
MS.gene43915.t1 MTR_2g038760 25.455 550 269 17 1 419 712 1251 1.13e-25 110
MS.gene43915.t1 MTR_3g032340 28.429 401 262 12 2 385 748 1140 1.98e-25 109
MS.gene43915.t1 MTR_3g032340 27.954 347 217 12 98 416 948 1289 1.29e-13 73.6
MS.gene43915.t1 MTR_3g011620 29.833 419 232 14 2 378 702 1100 2.32e-25 109
MS.gene43915.t1 MTR_3g032110 28.180 401 263 12 2 385 745 1137 2.83e-25 109
MS.gene43915.t1 MTR_3g032110 27.666 347 216 13 98 416 945 1284 2.25e-11 66.6
MS.gene43915.t1 MTR_2g014840 29.343 426 251 15 2 392 692 1102 3.25e-25 108
MS.gene43915.t1 MTR_0511s0010 34.101 217 120 4 215 409 13 228 6.31e-25 102
MS.gene43915.t1 MTR_6g016420 27.610 431 223 15 2 418 670 1025 7.68e-25 107
MS.gene43915.t1 MTR_0002s0090 30.184 434 274 16 2 418 698 1119 9.66e-25 107
MS.gene43915.t1 MTR_3g035500 30.184 434 274 16 2 418 698 1119 9.66e-25 107
MS.gene43915.t1 MTR_3g035940 28.103 427 243 14 2 391 698 1097 2.27e-24 106
MS.gene43915.t1 MTR_0603s0010 28.606 409 249 16 2 392 758 1141 2.41e-24 106
MS.gene43915.t1 MTR_5g072250 41.624 197 107 6 1 193 672 864 3.32e-24 105
MS.gene43915.t1 MTR_2g038930 24.908 546 271 16 1 416 538 1074 4.69e-24 105
MS.gene43915.t1 MTR_2g038900 25.275 546 269 16 1 416 701 1237 6.86e-24 105
MS.gene43915.t1 MTR_6g046900 33.333 213 139 2 205 416 167 377 8.20e-24 102
MS.gene43915.t1 MTR_3g033380 30.631 333 207 13 2 316 701 1027 1.73e-23 103
MS.gene43915.t1 MTR_3g035480 28.536 403 223 15 2 392 698 1047 2.14e-23 103
MS.gene43915.t1 MTR_3g034380 28.362 409 241 14 3 367 697 1097 2.73e-23 103
MS.gene43915.t1 MTR_0002s0110 28.536 403 223 15 2 392 698 1047 4.81e-23 102
MS.gene43915.t1 MTR_3g022790 29.571 443 238 20 2 392 692 1112 5.21e-23 102
MS.gene43915.t1 MTR_5g037590 26.493 536 263 18 3 416 656 1182 8.17e-23 102
MS.gene43915.t1 MTR_8g446950 25.092 546 269 17 2 416 721 1257 1.13e-22 101
MS.gene43915.t1 MTR_3g020890 28.199 422 265 15 2 392 687 1101 1.45e-22 101
MS.gene43915.t1 MTR_1g045960 26.239 545 260 21 2 416 666 1198 1.63e-22 100
MS.gene43915.t1 MTR_2g039090 26.825 548 259 20 1 416 685 1222 1.78e-22 100
MS.gene43915.t1 MTR_3g034460 26.484 438 237 15 3 392 682 1082 2.46e-22 100
MS.gene43915.t1 MTR_1g008240 25.837 418 255 14 2 375 682 1088 3.34e-22 100
MS.gene43915.t1 MTR_3g031940 29.179 329 188 13 2 291 700 1022 3.63e-22 100
MS.gene43915.t1 MTR_3g030960 27.374 358 219 11 2 323 697 1049 3.66e-22 99.8
MS.gene43915.t1 MTR_3g035960 28.351 388 185 14 2 372 696 1007 5.64e-22 99.4
MS.gene43915.t1 MTR_8g038590 27.407 405 267 13 1 392 706 1096 7.82e-22 99.0
MS.gene43915.t1 MTR_8g038590 28.720 289 168 12 165 420 961 1244 2.62e-12 69.3
MS.gene43915.t1 MTR_5g095910 29.440 411 233 19 2 392 696 1069 1.03e-21 98.6
MS.gene43915.t1 MTR_3g030980 28.354 328 193 12 2 292 697 1019 1.06e-21 98.6
MS.gene43915.t1 MTR_3g435720 25.747 435 272 13 2 390 697 1126 1.25e-21 98.2
MS.gene43915.t1 MTR_3g032200 26.478 423 257 16 2 377 700 1115 1.39e-21 98.2
MS.gene43915.t1 MTR_3g435740 26.027 438 267 16 2 390 741 1170 1.70e-21 97.8
MS.gene43915.t1 MTR_3g019040 26.752 471 269 18 2 414 697 1149 1.74e-21 97.8
MS.gene43915.t1 MTR_3g071070 25.261 479 246 16 1 415 474 904 2.08e-21 97.4
MS.gene43915.t1 MTR_3g021380 25.100 498 250 16 2 414 672 1131 3.42e-21 97.1
MS.gene43915.t1 MTR_0534s0010 31.746 189 104 3 231 418 6 170 3.63e-21 90.5
MS.gene43915.t1 MTR_3g027250 26.509 464 283 14 3 415 684 1140 3.92e-21 96.7
MS.gene43915.t1 MTR_3g022600 29.717 424 241 18 3 392 714 1114 4.49e-21 96.7
MS.gene43915.t1 MTR_3g023030 25.105 474 287 14 2 417 696 1159 6.75e-21 95.9
MS.gene43915.t1 MTR_3g032800 27.654 358 214 13 2 320 697 1048 7.57e-21 95.9
MS.gene43915.t1 MTR_3g022230 30.250 400 244 19 2 393 696 1068 8.09e-21 95.9
MS.gene43915.t1 MTR_3g023030 25.316 474 286 15 2 417 662 1125 8.61e-21 95.5
MS.gene43915.t1 MTR_3g022130 31.818 374 211 18 38 391 708 1057 8.79e-21 95.5
MS.gene43915.t1 MTR_6g016430 27.442 430 225 14 2 418 694 1049 1.04e-20 95.5
MS.gene43915.t1 MTR_3g435220 28.293 410 246 17 2 385 656 1043 1.27e-20 95.1
MS.gene43915.t1 MTR_3g028040 28.117 409 242 15 3 367 698 1098 1.40e-20 95.1
MS.gene43915.t1 MTR_3g071130 26.055 403 270 14 1 391 679 1065 1.50e-20 95.1
MS.gene43915.t1 MTR_3g034430 26.852 432 244 14 3 392 698 1099 1.72e-20 94.7
MS.gene43915.t1 MTR_3g021100 25.352 497 250 18 2 414 690 1149 1.87e-20 94.7
MS.gene43915.t1 MTR_3g020620 29.518 332 196 13 3 320 847 1154 2.15e-20 94.4
MS.gene43915.t1 MTR_0002s0120 30.508 354 198 15 2 314 481 827 2.33e-20 94.4
MS.gene43915.t1 MTR_0083s0120 30.303 297 174 11 2 290 246 517 2.43e-20 94.0
MS.gene43915.t1 MTR_3g021330 31.488 289 166 10 15 290 274 543 2.51e-20 93.6
MS.gene43915.t1 MTR_3g022240 28.792 389 205 16 2 385 31 352 2.84e-20 92.4
MS.gene43915.t1 MTR_3g033860 29.398 415 255 17 3 392 698 1099 2.84e-20 94.0
MS.gene43915.t1 MTR_0005s0200 26.049 453 286 18 3 416 713 1155 3.20e-20 94.0
MS.gene43915.t1 MTR_3g033240 29.085 306 184 13 2 283 700 996 3.39e-20 94.0
MS.gene43915.t1 MTR_3g032960 28.615 325 189 11 2 288 697 1016 4.25e-20 93.6
MS.gene43915.t1 MTR_1g078490 29.603 277 140 7 191 416 570 842 4.95e-20 93.2
MS.gene43915.t1 MTR_3g014040 26.816 537 253 19 2 414 690 1210 5.71e-20 93.2
MS.gene43915.t1 MTR_3g032500 30.412 388 211 17 2 367 701 1051 7.50e-20 92.8
MS.gene43915.t1 MTR_5g076840 35.685 241 120 9 201 412 617 851 7.55e-20 92.8
MS.gene43915.t1 MTR_8g445980 27.778 270 140 4 199 418 581 845 9.41e-20 92.4
MS.gene43915.t1 MTR_3g033110 27.019 359 220 12 2 323 676 1029 1.37e-19 92.0
MS.gene43915.t1 MTR_0425s0020 30.357 392 243 14 2 385 706 1075 1.66e-19 91.7
MS.gene43915.t1 MTR_8g037220 26.630 368 197 11 63 417 1436 1743 2.20e-19 91.7
MS.gene43915.t1 MTR_8g037220 26.630 368 197 11 63 417 1657 1964 2.25e-19 91.7
MS.gene43915.t1 MTR_3g032760 24.655 580 260 22 2 416 697 1264 2.59e-19 91.3
MS.gene43915.t1 MTR_3g022570 24.748 497 251 19 3 414 721 1179 2.60e-19 91.3
MS.gene43915.t1 MTR_3g032370 26.260 377 232 11 2 337 695 1066 4.48e-19 90.5
MS.gene43915.t1 MTR_3g032150 26.360 478 258 19 2 392 695 1165 5.11e-19 90.5
MS.gene43915.t1 MTR_8g011850 28.814 354 180 10 67 407 1714 2008 5.43e-19 90.5
MS.gene43915.t1 MTR_0137s0010 26.733 505 262 19 2 414 244 732 9.11e-19 89.4
MS.gene43915.t1 MTR_3g036050 26.190 420 259 15 2 377 308 720 1.23e-18 89.0
MS.gene43915.t1 MTR_8g030860 27.778 324 194 13 2 290 703 1021 1.27e-18 89.0
MS.gene43915.t1 MTR_2g063777 31.188 202 122 6 2 189 694 892 1.42e-18 89.0
MS.gene43915.t1 MTR_3g024460 23.926 489 262 17 2 414 302 756 1.51e-18 88.6
MS.gene43915.t1 MTR_3g022060 28.964 473 262 21 2 414 583 1041 1.76e-18 88.6
MS.gene43915.t1 MTR_8g011600 26.190 378 199 14 61 417 477 795 1.98e-18 88.2
MS.gene43915.t1 MTR_3g033080 33.668 199 118 7 2 190 700 894 2.51e-18 88.2
MS.gene43915.t1 MTR_5g040900 31.111 270 155 9 12 277 623 865 3.43e-18 87.4
MS.gene43915.t1 MTR_5g040900 29.197 411 188 18 50 409 519 877 1.52e-16 82.4
MS.gene43915.t1 MTR_3g022870 26.964 471 273 19 3 414 647 1105 3.53e-18 87.8
MS.gene43915.t1 MTR_3g022870 26.964 471 273 19 3 414 683 1141 4.05e-18 87.4
MS.gene43915.t1 MTR_3g019000 24.230 487 264 16 2 414 695 1150 4.14e-18 87.4
MS.gene43915.t1 MTR_3g014390 25.328 458 270 16 1 391 696 1148 5.20e-18 87.4
MS.gene43915.t1 MTR_7g021000 28.785 469 243 22 2 414 693 1126 6.68e-18 86.7
MS.gene43915.t1 MTR_3g022400 26.105 475 244 21 3 414 680 1110 6.70e-18 86.7
MS.gene43915.t1 MTR_3g022400 25.403 496 249 21 3 414 680 1138 8.77e-18 86.7
MS.gene43915.t1 MTR_3g014320 27.595 395 241 15 2 371 699 1073 1.34e-17 85.9
MS.gene43915.t1 MTR_3g014320 28.481 316 173 10 142 416 1035 1338 2.31e-11 66.6
MS.gene43915.t1 MTR_4g050410 26.075 372 227 14 2 332 695 1059 1.35e-17 85.9
MS.gene43915.t1 MTR_7g013560 26.330 376 201 12 58 415 650 967 1.47e-17 85.9
MS.gene43915.t1 MTR_7g078640 33.469 245 129 8 200 416 577 815 1.47e-17 85.5
MS.gene43915.t1 MTR_7g078300 29.455 275 142 6 191 416 577 848 1.63e-17 85.5
MS.gene43915.t1 MTR_3g022300 28.671 429 236 22 2 392 706 1102 2.28e-17 85.1
MS.gene43915.t1 MTR_4g119140 26.712 292 183 8 136 416 443 714 3.14e-17 84.3
MS.gene43915.t1 MTR_1g037610 27.681 401 244 15 2 371 700 1085 3.35e-17 84.7
MS.gene43915.t1 MTR_1g037610 27.246 345 213 11 65 403 1025 1337 8.18e-12 67.8
MS.gene43915.t1 MTR_3g022920 25.051 495 252 18 3 414 676 1134 5.03e-17 84.0
MS.gene43915.t1 MTR_3g021340 25.558 493 246 21 2 414 684 1135 9.17e-17 83.2
MS.gene43915.t1 MTR_4g094540 29.134 254 136 7 191 409 603 847 1.17e-16 82.8
MS.gene43915.t1 MTR_3g436130 34.646 127 79 3 3 129 64 186 1.23e-16 78.2
MS.gene43915.t1 MTR_3g022940 25.911 494 249 21 3 414 683 1141 1.26e-16 82.8
MS.gene43915.t1 MTR_1643s0010 32.579 221 107 8 3 193 36 244 1.42e-16 80.9
MS.gene43915.t1 MTR_7g091140 30.159 252 146 7 188 414 615 861 1.99e-16 82.4
MS.gene43915.t1 MTR_3g027420 25.963 493 251 19 2 417 686 1141 2.37e-16 82.0
MS.gene43915.t1 MTR_3g021400 27.484 473 271 20 2 414 674 1134 6.21e-16 80.9
MS.gene43915.t1 MTR_1g047910 28.182 220 148 4 204 418 652 866 1.80e-15 79.3
MS.gene43915.t1 MTR_8g038570 33.333 183 113 5 1 179 713 890 1.84e-15 79.3
MS.gene43915.t1 MTR_6g016420 30.537 298 184 13 2 290 670 953 2.10e-15 79.0
MS.gene43915.t1 MTR_2g062360 26.908 249 145 6 201 416 354 598 2.47e-15 78.6
MS.gene43915.t1 MTR_3g014360 24.664 446 245 16 2 392 684 1093 2.93e-15 78.6
MS.gene43915.t1 MTR_3g018970 24.804 383 228 12 2 343 150 513 3.36e-15 77.8
MS.gene43915.t1 MTR_3g021170 27.533 454 222 20 2 367 685 1119 3.41e-15 78.6
MS.gene43915.t1 MTR_6g084540 28.906 256 140 9 168 416 8 228 4.76e-15 74.7
MS.gene43915.t1 MTR_8g011170 26.346 353 185 10 67 417 621 900 6.21e-15 77.4
MS.gene43915.t1 MTR_3g027200 26.506 498 239 22 2 414 701 1156 9.36e-15 77.0
MS.gene43915.t1 MTR_6g084550 32.447 188 111 7 2 179 682 863 1.57e-14 76.3
MS.gene43915.t1 MTR_1g047800 24.586 362 222 12 2 320 688 1041 1.81e-14 76.3
MS.gene43915.t1 MTR_3g035810 31.282 195 123 5 2 188 666 857 2.31e-14 75.9
MS.gene43915.t1 MTR_3g014510 27.068 399 225 12 77 414 920 1313 2.33e-14 75.9
MS.gene43915.t1 MTR_3g014510 24.433 397 226 17 2 371 700 1049 1.53e-11 67.0
MS.gene43915.t1 MTR_3g018930 25.567 485 257 19 3 414 700 1153 2.81e-14 75.5
MS.gene43915.t1 MTR_5g039570 38.129 139 80 4 1 136 443 578 3.61e-14 74.7
MS.gene43915.t1 MTR_7g022290 31.683 202 116 6 220 415 333 518 4.00e-14 74.3
MS.gene43915.t1 MTR_8g445160 27.500 240 131 4 222 418 443 682 5.49e-14 74.3
MS.gene43915.t1 MTR_7g491180 29.646 226 124 7 217 414 643 861 5.57e-14 74.3
MS.gene43915.t1 MTR_7g091190 29.646 226 124 7 217 414 643 861 5.57e-14 74.3
MS.gene43915.t1 MTR_8g011180 27.297 370 197 14 53 413 626 932 6.75e-14 74.3
MS.gene43915.t1 MTR_3g033130 27.869 305 180 13 4 288 657 941 8.79e-14 73.9
MS.gene43915.t1 MTR_0267s0070 29.353 201 132 6 2 193 705 904 1.58e-13 73.6
MS.gene43915.t1 MTR_3g025360 28.358 335 209 16 2 322 711 1028 2.49e-13 72.8
MS.gene43915.t1 MTR_7g021000 35.714 154 92 5 2 151 693 843 4.72e-13 71.6
MS.gene43915.t1 MTR_7g078790 30.233 215 109 7 3 183 685 892 4.98e-13 71.6
MS.gene43915.t1 MTR_3g015560 30.180 222 136 5 210 418 629 844 5.95e-13 71.2
MS.gene43915.t1 MTR_3g070590 25.648 386 211 15 1 347 679 1027 8.87e-13 70.9
MS.gene43915.t1 MTR_8g039260 25.935 428 217 17 14 417 228 579 1.72e-12 69.7
MS.gene43915.t1 MTR_8g011550 25.872 344 212 11 89 415 614 931 1.81e-12 69.7
MS.gene43915.t1 MTR_3g027470 28.531 354 179 14 2 290 601 945 2.27e-12 69.7
MS.gene43915.t1 MTR_3g015260 25.541 462 250 19 3 416 699 1114 2.66e-12 69.3
MS.gene43915.t1 MTR_8g027540 26.166 386 197 15 29 388 615 938 3.29e-12 68.9
MS.gene43915.t1 MTR_8g062130 28.239 301 199 8 89 385 649 936 4.94e-12 68.6
MS.gene43915.t1 MTR_3g086080 29.487 156 86 3 226 375 67 204 7.58e-12 65.5
MS.gene43915.t1 MTR_4g119195 28.340 247 141 8 201 419 615 853 2.03e-11 66.6
MS.gene43915.t1 MTR_1g047870 27.322 183 116 3 237 418 283 449 6.06e-11 64.3
MS.gene43915.t1 MTR_7g091110 29.240 171 94 6 247 415 696 841 7.58e-11 64.7
MS.gene43915.t1 MTR_3g034650 24.711 433 243 16 3 385 220 619 8.19e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43915.t1 AT3G14470 30.769 299 175 11 2 274 698 990 6.03e-22 99.4
MS.gene43915.t1 AT3G14470 30.769 299 175 11 2 274 698 990 6.03e-22 99.4
MS.gene43915.t1 AT1G69550 29.450 309 179 7 89 391 718 993 1.21e-16 83.2
MS.gene43915.t1 AT1G69550 31.013 316 188 11 89 391 910 1208 1.93e-13 73.2
MS.gene43915.t1 AT1G69550 29.755 326 207 12 89 406 934 1245 3.35e-11 65.9
MS.gene43915.t1 AT3G25510 27.920 351 199 12 86 416 506 822 7.34e-15 77.4
MS.gene43915.t1 AT3G25510 27.920 351 199 12 86 416 506 822 7.34e-15 77.4
MS.gene43915.t1 AT3G14460 26.636 214 114 6 2 177 692 900 1.15e-11 67.4
MS.gene43915.t1 AT5G44510 27.070 314 187 9 85 391 678 956 3.89e-11 65.9
MS.gene43915.t1 AT5G44510 27.070 314 187 9 85 391 678 956 3.90e-11 65.9
MS.gene43915.t1 AT5G44510 27.070 314 187 9 85 391 678 956 4.31e-11 65.5
MS.gene43915.t1 AT5G44510 27.070 314 187 9 85 391 678 956 4.88e-11 65.5

Find 84 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGCAAGGCCAACAATTT+AGG 0.167445 5.4:+25039993 None:intergenic
TAAATACTGTTAAACTCTTT+AGG 0.213780 5.4:+25040189 None:intergenic
AAATACTGTTAAACTCTTTA+GGG 0.231316 5.4:+25040190 None:intergenic
CATCCCTTGATAAAATTATC+AGG 0.273657 5.4:+25040066 None:intergenic
CCTCACTTGTCTTGAGGAAT+TGG 0.288710 5.4:-25039610 MS.gene43915:CDS
TTTCAGATAGGTTGAACTTT+TGG 0.311729 5.4:+25039643 None:intergenic
TGTTTACACCTTCCGCATTT+GGG 0.334638 5.4:-25040224 MS.gene43915:CDS
CTTCGAAGTTGCTGAGTTTG+AGG 0.337667 5.4:+25040347 None:intergenic
ATGAGCATTCAATGCCTTAC+TGG 0.343708 5.4:-25039408 MS.gene43915:CDS
TTGTTTACACCTTCCGCATT+TGG 0.348560 5.4:-25040225 MS.gene43915:CDS
AACTCAGCAACTTCGAAGTC+TGG 0.352151 5.4:-25040342 MS.gene43915:CDS
GTAGGACTAGAAATCCATTC+TGG 0.353036 5.4:+25040290 None:intergenic
CTTCATTGCCACTGAACATA+AGG 0.359972 5.4:+25039883 None:intergenic
TCAGGTATGGATGCAAGATT+TGG 0.366067 5.4:+25039501 None:intergenic
CTTGATAAAATTATCAGGTT+TGG 0.367103 5.4:+25040071 None:intergenic
TATTGAATGCCCTAAATTGT+TGG 0.371984 5.4:-25040003 MS.gene43915:CDS
CTTCTATTTCTGAGCAACTT+TGG 0.374317 5.4:+25039583 None:intergenic
CAGGTTCCTGTTTCCCAGAA+TGG 0.374803 5.4:-25040304 MS.gene43915:CDS
GCTCCCACACCTTTCTCAAT+TGG 0.382739 5.4:-25040030 MS.gene43915:CDS
AAGGCAAGGCCAACAATTTA+GGG 0.385016 5.4:+25039994 None:intergenic
ATTGGAAGGCACATCAGCTT+TGG 0.387314 5.4:+25039429 None:intergenic
AAATGAAGAGTCACAATTGC+AGG 0.392229 5.4:-25040402 MS.gene43915:CDS
AGAAATCCATTCTGGGAAAC+AGG 0.398856 5.4:+25040298 None:intergenic
AGGTTTCTTAGCATCCCATC+TGG 0.438181 5.4:+25039846 None:intergenic
GCTTGACATATTAGCTTCCT+TGG 0.439627 5.4:+25040460 None:intergenic
CAATAATTTCCAATTGAGAA+AGG 0.441996 5.4:+25040021 None:intergenic
CTGGGTGTTCGAGGATATAC+AGG 0.453391 5.4:-25040323 MS.gene43915:CDS
TAATGTGAAGGTCTCCTTGA+AGG 0.454630 5.4:+25040516 None:intergenic
GGTATTGAAAACTTTCAGAT+AGG 0.459152 5.4:+25039631 None:intergenic
TCATGCGATGATGGAGTTGC+AGG 0.460458 5.4:-25040134 MS.gene43915:CDS
GCATCCATACCTGACTGGTT+AGG 0.473586 5.4:-25039492 MS.gene43915:CDS
CTTCGAAGTCTGGGTGTTCG+AGG 0.474384 5.4:-25040332 MS.gene43915:CDS
CTAAGGTTAATGATTTCAGT+TGG 0.478030 5.4:+25039771 None:intergenic
GACGAGGAGTCATGCGATGA+TGG 0.487597 5.4:-25040143 MS.gene43915:CDS
TTCATTGCCACTGAACATAA+GGG 0.490881 5.4:+25039884 None:intergenic
CTTCATCTGTCAATGACTTG+AGG 0.493271 5.4:+25039712 None:intergenic
AACTAACTTGCTTTCCAGAT+GGG 0.499249 5.4:-25039860 MS.gene43915:CDS
TAGGACTAGAAATCCATTCT+GGG 0.502270 5.4:+25040291 None:intergenic
CGTAGGTTTCCTAACCAGTC+AGG 0.504890 5.4:+25039483 None:intergenic
AAACGGTGTAAAGAGAAAAC+AGG 0.506903 5.4:-25039345 MS.gene43915:CDS
TAAGGTTAATGATTTCAGTT+GGG 0.511910 5.4:+25039772 None:intergenic
AAGAGAAAACAGGTGAGGAT+TGG 0.513788 5.4:-25039335 MS.gene43915:CDS
TCAATACCTCACTTGTCTTG+AGG 0.519923 5.4:-25039616 MS.gene43915:CDS
GTAAGGCATTGAATGCTCAT+TGG 0.519950 5.4:+25039411 None:intergenic
GTTTCCTAACCAGTCAGGTA+TGG 0.524344 5.4:+25039488 None:intergenic
TTAGGACAAATGAACCTTCA+AGG 0.526890 5.4:-25040530 None:intergenic
AGACCTTCACATTAAGCACT+TGG 0.529013 5.4:-25040507 MS.gene43915:CDS
GAACTAACTTGCTTTCCAGA+TGG 0.537059 5.4:-25039861 MS.gene43915:CDS
GGACAATTTGAAATTGTCAT+GGG 0.548122 5.4:-25040429 MS.gene43915:CDS
CACACAATGTCAGCAATTGA+AGG 0.548405 5.4:+25039529 None:intergenic
CTCATTGATATGCGTATAAG+CGG 0.551048 5.4:-25039960 MS.gene43915:CDS
ACTCAGCAACTTCGAAGTCT+GGG 0.552892 5.4:-25040341 MS.gene43915:CDS
TATAAGCGGAAAATGCAATA+CGG 0.553844 5.4:-25039946 MS.gene43915:CDS
TTTCCAATTGAGAAAGGTGT+GGG 0.554713 5.4:+25040027 None:intergenic
GAAAACATCAGAACATTCTA+CGG 0.557698 5.4:-25039279 MS.gene43915:CDS
ATAAGCGGAAAATGCAATAC+GGG 0.561726 5.4:-25039945 MS.gene43915:CDS
ATCTTGCATCCATACCTGAC+TGG 0.565687 5.4:-25039497 MS.gene43915:CDS
CTTGAATCCCTTATGTTCAG+TGG 0.569665 5.4:-25039891 MS.gene43915:CDS
TGGACAATTTGAAATTGTCA+TGG 0.569957 5.4:-25040430 MS.gene43915:CDS
ATATTTCTTCGACAGCACTA+AGG 0.577053 5.4:+25039754 None:intergenic
ATTTCCAATTGAGAAAGGTG+TGG 0.577913 5.4:+25040026 None:intergenic
GGCATTGAATGCTCATTGGA+AGG 0.579925 5.4:+25039415 None:intergenic
TCTCCAAGTGCTTAATGTGA+AGG 0.582964 5.4:+25040504 None:intergenic
ACTGTTAAACTCTTTAGGGA+TGG 0.583404 5.4:+25040194 None:intergenic
TGCGATGATGGAGTTGCAGG+AGG 0.604064 5.4:-25040131 MS.gene43915:CDS
TTAATTCTTGAAGCAAACGT+AGG 0.605819 5.4:+25039466 None:intergenic
TTGACAGATGAAGAATTACA+AGG 0.608656 5.4:-25039702 MS.gene43915:CDS
GAGAGATGGAAGGCAAGGCA+AGG 0.609388 5.4:+25039980 None:intergenic
TCAATGAGAGATGGAAGGCA+AGG 0.612167 5.4:+25039975 None:intergenic
TAAAAGTGTAATGAATGCCA+AGG 0.617269 5.4:-25040477 MS.gene43915:CDS
GTTGCAGTGAGTTAGAGAAA+CGG 0.619610 5.4:-25039362 MS.gene43915:CDS
ACACAATGTCAGCAATTGAA+GGG 0.626283 5.4:+25039530 None:intergenic
TCAAACGTTTCAGACCAGTA+AGG 0.626808 5.4:+25039394 None:intergenic
ACAATTGCAGGAAAATGTTG+AGG 0.630547 5.4:-25040390 MS.gene43915:CDS
ATACGCATATCAATGAGAGA+TGG 0.631287 5.4:+25039966 None:intergenic
GATGGTAGCTTCCCCAAATG+CGG 0.644186 5.4:+25040212 None:intergenic
GTTTACACCTTCCGCATTTG+GGG 0.646342 5.4:-25040223 MS.gene43915:CDS
GCATATCAATGAGAGATGGA+AGG 0.649270 5.4:+25039970 None:intergenic
TAATATGTCAAGCATGTGCG+TGG 0.652604 5.4:-25040450 MS.gene43915:CDS
GTAGCTTCCCCAAATGCGGA+AGG 0.659246 5.4:+25040216 None:intergenic
GTGTAAAGAGAAAACAGGTG+AGG 0.675563 5.4:-25039340 MS.gene43915:CDS
TGACAGATGAAGAATTACAA+GGG 0.679371 5.4:-25039701 MS.gene43915:CDS
CCAATTCCTCAAGACAAGTG+AGG 0.681422 5.4:+25039610 None:intergenic
TCATGTAAAATACTTAGACG+AGG 0.738566 5.4:-25040159 MS.gene43915:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATTCAAATTTGT+AGG - chr5.4:25039981-25040000 MS.gene43915:CDS 10.0%
!! AAATACTGTTAAACTCTTTA+GGG + chr5.4:25039609-25039628 None:intergenic 20.0%
!! TAAATACTGTTAAACTCTTT+AGG + chr5.4:25039610-25039629 None:intergenic 20.0%
!!! AAACCTGATAATTTTATCAA+GGG - chr5.4:25039727-25039746 MS.gene43915:CDS 20.0%
!!! CTAGTTAAATATTTTAGAGT+AGG + chr5.4:25039527-25039546 None:intergenic 20.0%
!!! GAATTTTTTTTAGAGAATTG+AGG + chr5.4:25039973-25039992 None:intergenic 20.0%
!!! TTTTATATGTCTAGAAAAAC+TGG - chr5.4:25039688-25039707 MS.gene43915:CDS 20.0%
! CAATAATTTCCAATTGAGAA+AGG + chr5.4:25039778-25039797 None:intergenic 25.0%
! CTTGATAAAATTATCAGGTT+TGG + chr5.4:25039728-25039747 None:intergenic 25.0%
! TAAGGTTAATGATTTCAGTT+GGG + chr5.4:25040027-25040046 None:intergenic 25.0%
!! CAAACCTGATAATTTTATCA+AGG - chr5.4:25039726-25039745 MS.gene43915:CDS 25.0%
CATCCCTTGATAAAATTATC+AGG + chr5.4:25039733-25039752 None:intergenic 30.0%
CTAAGGTTAATGATTTCAGT+TGG + chr5.4:25040028-25040047 None:intergenic 30.0%
GAAAACATCAGAACATTCTA+CGG - chr5.4:25040517-25040536 MS.gene43915:CDS 30.0%
TATAAGCGGAAAATGCAATA+CGG - chr5.4:25039850-25039869 MS.gene43915:CDS 30.0%
TATTGAATGCCCTAAATTGT+TGG - chr5.4:25039793-25039812 MS.gene43915:CDS 30.0%
TCATGTAAAATACTTAGACG+AGG - chr5.4:25039637-25039656 MS.gene43915:CDS 30.0%
TGACAGATGAAGAATTACAA+GGG - chr5.4:25040095-25040114 MS.gene43915:CDS 30.0%
TTAATTCTTGAAGCAAACGT+AGG + chr5.4:25040333-25040352 None:intergenic 30.0%
TTGACAGATGAAGAATTACA+AGG - chr5.4:25040094-25040113 MS.gene43915:CDS 30.0%
! GGACAATTTGAAATTGTCAT+GGG - chr5.4:25039367-25039386 MS.gene43915:CDS 30.0%
! GGTATTGAAAACTTTCAGAT+AGG + chr5.4:25040168-25040187 None:intergenic 30.0%
! TAAAAGTGTAATGAATGCCA+AGG - chr5.4:25039319-25039338 MS.gene43915:CDS 30.0%
! TGGACAATTTGAAATTGTCA+TGG - chr5.4:25039366-25039385 MS.gene43915:CDS 30.0%
!! CATTGAATGTGAGCTATTTT+TGG + chr5.4:25040487-25040506 None:intergenic 30.0%
!! TTTCAGATAGGTTGAACTTT+TGG + chr5.4:25040156-25040175 None:intergenic 30.0%
AAACGGTGTAAAGAGAAAAC+AGG - chr5.4:25040451-25040470 MS.gene43915:CDS 35.0%
AAATGAAGAGTCACAATTGC+AGG - chr5.4:25039394-25039413 MS.gene43915:CDS 35.0%
ACAATTGCAGGAAAATGTTG+AGG - chr5.4:25039406-25039425 MS.gene43915:CDS 35.0%
ACACAATGTCAGCAATTGAA+GGG + chr5.4:25040269-25040288 None:intergenic 35.0%
ATAAGCGGAAAATGCAATAC+GGG - chr5.4:25039851-25039870 MS.gene43915:CDS 35.0%
ATACGCATATCAATGAGAGA+TGG + chr5.4:25039833-25039852 None:intergenic 35.0%
ATATTTCTTCGACAGCACTA+AGG + chr5.4:25040045-25040064 None:intergenic 35.0%
ATTTCCAATTGAGAAAGGTG+TGG + chr5.4:25039773-25039792 None:intergenic 35.0%
CTCATTGATATGCGTATAAG+CGG - chr5.4:25039836-25039855 MS.gene43915:CDS 35.0%
TAGGACTAGAAATCCATTCT+GGG + chr5.4:25039508-25039527 None:intergenic 35.0%
TTCATTGCCACTGAACATAA+GGG + chr5.4:25039915-25039934 None:intergenic 35.0%
! ACTGTTAAACTCTTTAGGGA+TGG + chr5.4:25039605-25039624 None:intergenic 35.0%
! TTTCCAATTGAGAAAGGTGT+GGG + chr5.4:25039772-25039791 None:intergenic 35.0%
!! AACTAACTTGCTTTCCAGAT+GGG - chr5.4:25039936-25039955 MS.gene43915:CDS 35.0%
!! CTTCTATTTCTGAGCAACTT+TGG + chr5.4:25040216-25040235 None:intergenic 35.0%
AAGAGAAAACAGGTGAGGAT+TGG - chr5.4:25040461-25040480 MS.gene43915:CDS 40.0%
AAGGCAAGGCCAACAATTTA+GGG + chr5.4:25039805-25039824 None:intergenic 40.0%
AGACCTTCACATTAAGCACT+TGG - chr5.4:25039289-25039308 MS.gene43915:CDS 40.0%
ATGAGCATTCAATGCCTTAC+TGG - chr5.4:25040388-25040407 MS.gene43915:CDS 40.0%
CACACAATGTCAGCAATTGA+AGG + chr5.4:25040270-25040289 None:intergenic 40.0%
CTTCATCTGTCAATGACTTG+AGG + chr5.4:25040087-25040106 None:intergenic 40.0%
CTTCATTGCCACTGAACATA+AGG + chr5.4:25039916-25039935 None:intergenic 40.0%
CTTGAATCCCTTATGTTCAG+TGG - chr5.4:25039905-25039924 MS.gene43915:CDS 40.0%
GCATATCAATGAGAGATGGA+AGG + chr5.4:25039829-25039848 None:intergenic 40.0%
GTAGGACTAGAAATCCATTC+TGG + chr5.4:25039509-25039528 None:intergenic 40.0%
GTGTAAAGAGAAAACAGGTG+AGG - chr5.4:25040456-25040475 MS.gene43915:CDS 40.0%
GTTGCAGTGAGTTAGAGAAA+CGG - chr5.4:25040434-25040453 MS.gene43915:CDS 40.0%
TAATATGTCAAGCATGTGCG+TGG - chr5.4:25039346-25039365 MS.gene43915:CDS 40.0%
TAATGTGAAGGTCTCCTTGA+AGG + chr5.4:25039283-25039302 None:intergenic 40.0%
TCAAACGTTTCAGACCAGTA+AGG + chr5.4:25040405-25040424 None:intergenic 40.0%
TCAATACCTCACTTGTCTTG+AGG - chr5.4:25040180-25040199 MS.gene43915:CDS 40.0%
TCAGGTATGGATGCAAGATT+TGG + chr5.4:25040298-25040317 None:intergenic 40.0%
TCTCCAAGTGCTTAATGTGA+AGG + chr5.4:25039295-25039314 None:intergenic 40.0%
TGTTTACACCTTCCGCATTT+GGG - chr5.4:25039572-25039591 MS.gene43915:CDS 40.0%
TTGTTTACACCTTCCGCATT+TGG - chr5.4:25039571-25039590 MS.gene43915:CDS 40.0%
! AGAAATCCATTCTGGGAAAC+AGG + chr5.4:25039501-25039520 None:intergenic 40.0%
! GCTTGACATATTAGCTTCCT+TGG + chr5.4:25039339-25039358 None:intergenic 40.0%
!! GAACTAACTTGCTTTCCAGA+TGG - chr5.4:25039935-25039954 MS.gene43915:CDS 40.0%
!! GTAAGGCATTGAATGCTCAT+TGG + chr5.4:25040388-25040407 None:intergenic 40.0%
AACTCAGCAACTTCGAAGTC+TGG - chr5.4:25039454-25039473 MS.gene43915:CDS 45.0%
ACTCAGCAACTTCGAAGTCT+GGG - chr5.4:25039455-25039474 MS.gene43915:CDS 45.0%
AGGTTTCTTAGCATCCCATC+TGG + chr5.4:25039953-25039972 None:intergenic 45.0%
ATCTTGCATCCATACCTGAC+TGG - chr5.4:25040299-25040318 MS.gene43915:CDS 45.0%
CAAGGCAAGGCCAACAATTT+AGG + chr5.4:25039806-25039825 None:intergenic 45.0%
CCAATTCCTCAAGACAAGTG+AGG + chr5.4:25040189-25040208 None:intergenic 45.0%
CCTCACTTGTCTTGAGGAAT+TGG - chr5.4:25040186-25040205 MS.gene43915:CDS 45.0%
CTTCGAAGTTGCTGAGTTTG+AGG + chr5.4:25039452-25039471 None:intergenic 45.0%
GTTTACACCTTCCGCATTTG+GGG - chr5.4:25039573-25039592 MS.gene43915:CDS 45.0%
GTTTCCTAACCAGTCAGGTA+TGG + chr5.4:25040311-25040330 None:intergenic 45.0%
TCAATGAGAGATGGAAGGCA+AGG + chr5.4:25039824-25039843 None:intergenic 45.0%
! ATTGGAAGGCACATCAGCTT+TGG + chr5.4:25040370-25040389 None:intergenic 45.0%
! GGCATTGAATGCTCATTGGA+AGG + chr5.4:25040384-25040403 None:intergenic 45.0%
CAGGTTCCTGTTTCCCAGAA+TGG - chr5.4:25039492-25039511 MS.gene43915:CDS 50.0%
CGTAGGTTTCCTAACCAGTC+AGG + chr5.4:25040316-25040335 None:intergenic 50.0%
CTGGGTGTTCGAGGATATAC+AGG - chr5.4:25039473-25039492 MS.gene43915:CDS 50.0%
GATGGTAGCTTCCCCAAATG+CGG + chr5.4:25039587-25039606 None:intergenic 50.0%
GCTCCCACACCTTTCTCAAT+TGG - chr5.4:25039766-25039785 MS.gene43915:CDS 50.0%
! GCATCCATACCTGACTGGTT+AGG - chr5.4:25040304-25040323 MS.gene43915:CDS 50.0%
!! TCATGCGATGATGGAGTTGC+AGG - chr5.4:25039662-25039681 MS.gene43915:CDS 50.0%
CTTCGAAGTCTGGGTGTTCG+AGG - chr5.4:25039464-25039483 MS.gene43915:CDS 55.0%
GACGAGGAGTCATGCGATGA+TGG - chr5.4:25039653-25039672 MS.gene43915:CDS 55.0%
GAGAGATGGAAGGCAAGGCA+AGG + chr5.4:25039819-25039838 None:intergenic 55.0%
GTAGCTTCCCCAAATGCGGA+AGG + chr5.4:25039583-25039602 None:intergenic 55.0%
!! TGCGATGATGGAGTTGCAGG+AGG - chr5.4:25039665-25039684 MS.gene43915:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 25039275 25040543 25039275 ID=MS.gene43915
chr5.4 mRNA 25039275 25040543 25039275 ID=MS.gene43915.t1;Parent=MS.gene43915
chr5.4 exon 25039275 25040543 25039275 ID=MS.gene43915.t1.exon1;Parent=MS.gene43915.t1
chr5.4 CDS 25039275 25040543 25039275 ID=cds.MS.gene43915.t1;Parent=MS.gene43915.t1
Gene Sequence

>MS.gene43915

ATGAACCTTCAAGGAGACCTTCACATTAAGCACTTGGAGAGAGTTAAAAGTGTAATGAATGCCAAGGAAGCTAATATGTCAAGCATGTGCGTGGACAATTTGAAATTGTCATGGGATAGAAATGAAGAGTCACAATTGCAGGAAAATGTTGAGGAGATTCTTGAAGTGCTTCAACCTCAAACTCAGCAACTTCGAAGTCTGGGTGTTCGAGGATATACAGGTTCCTGTTTCCCAGAATGGATTTCTAGTCCTACTCTAAAATATTTAACTAGTTTACAACTCGTGAATTGCAAAAGTTGTTTACACCTTCCGCATTTGGGGAAGCTACCATCCCTAAAGAGTTTAACAGTATTTAACATGAGTCATGTAAAATACTTAGACGAGGAGTCATGCGATGATGGAGTTGCAGGAGGTTTTATATGTCTAGAAAAACTGGATCTAGTGAAGCTGCCAAACCTGATAATTTTATCAAGGGATGATAGAGAAAACATGCTCCCACACCTTTCTCAATTGGAAATTATTGAATGCCCTAAATTGTTGGCCTTGCCTTGCCTTCCATCTCTCATTGATATGCGTATAAGCGGAAAATGCAATACGGGTTTACTAAGTTCAATTCAAAAACTCGTTAGTCTTGAATCCCTTATGTTCAGTGGCAATGAAGAACTAACTTGCTTTCCAGATGGGATGCTAAGAAACCTCAATTCTCTAAAAAAAATTCAAATTTGTAGGCTTTCTAAACTTGAAAGCTTCCCAACTGAAATCATTAACCTTAGTGCTGTCGAAGAAATATGTATTACTGATTGTGAAAACCTCAAGTCATTGACAGATGAAGAATTACAAGGGCTGCACTCTCTTAAGAGATTGAGTATTGTGAAGTACCAAAAGTTCAACCTATCTGAAAGTTTTCAATACCTCACTTGTCTTGAGGAATTGGTGATCCAAAGTTGCTCAGAAATAGAAGTTTTGCATGAGAGTTTACAACATATGACTTCCCTTCAATTGCTGACATTGTGTGATCTTCCAAATCTTGCATCCATACCTGACTGGTTAGGAAACCTACGTTTGCTTCAAGAATTAAATATTTCTCAGTGTCCAAAGCTGATGTGCCTTCCAATGAGCATTCAATGCCTTACTGGTCTGAAACGTTTGAGTATTTATAGTTGCAGTGAGTTAGAGAAACGGTGTAAAGAGAAAACAGGTGAGGATTGGCCAAAAATAGCTCACATTCAATGCATTGTAGTAGAAAACATCAGAACATTCTACGGATAA
Protein sequence

>MS.gene43915.t1

MNLQGDLHIKHLERVKSVMNAKEANMSSMCVDNLKLSWDRNEESQLQENVEEILEVLQPQTQQLRSLGVRGYTGSCFPEWISSPTLKYLTSLQLVNCKSCLHLPHLGKLPSLKSLTVFNMSHVKYLDEESCDDGVAGGFICLEKLDLVKLPNLIILSRDDRENMLPHLSQLEIIECPKLLALPCLPSLIDMRISGKCNTGLLSSIQKLVSLESLMFSGNEELTCFPDGMLRNLNSLKKIQICRLSKLESFPTEIINLSAVEEICITDCENLKSLTDEELQGLHSLKRLSIVKYQKFNLSESFQYLTCLEELVIQSCSEIEVLHESLQHMTSLQLLTLCDLPNLASIPDWLGNLRLLQELNISQCPKLMCLPMSIQCLTGLKRLSIYSCSELEKRCKEKTGEDWPKIAHIQCIVVENIRTFYG