AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058935


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058935.t1 MTR_2g094570 95.708 699 7 2 1 676 57 755 0.0 1372
MS.gene058935.t1 MTR_2g094570 95.708 699 7 2 1 676 1 699 0.0 1372
MS.gene058935.t1 MTR_2g094570 95.100 653 9 2 1 630 1 653 0.0 1272
MS.gene058935.t1 MTR_4g058930 68.150 719 163 18 1 675 1 697 0.0 879
MS.gene058935.t1 MTR_4g058930 68.110 693 155 18 1 649 1 671 0.0 845
MS.gene058935.t1 MTR_1g064430 55.731 698 225 17 2 643 31 700 0.0 712
MS.gene058935.t1 MTR_1g064430 55.731 698 225 17 2 643 18 687 0.0 712
MS.gene058935.t1 MTR_1g094960 55.950 563 198 9 2 517 10 569 0.0 564
MS.gene058935.t1 MTR_7g101280 51.920 547 205 11 1 502 21 554 0.0 533
MS.gene058935.t1 MTR_0041s0110 51.920 547 205 11 1 502 21 554 0.0 533
MS.gene058935.t1 MTR_3g073420 42.831 537 259 13 7 508 15 538 2.29e-115 358
MS.gene058935.t1 MTR_7g101275 53.918 319 106 3 20 331 1 285 1.39e-113 347
MS.gene058935.t1 MTR_0041s0120 48.774 367 123 8 20 356 1 332 9.91e-108 333
MS.gene058935.t1 MTR_5g061220 40.211 475 229 13 11 459 19 464 4.17e-96 306
MS.gene058935.t1 MTR_2g024430 40.355 394 162 11 8 376 17 362 4.98e-85 277
MS.gene058935.t1 MTR_5g040880 36.660 491 227 15 1 455 1 443 2.42e-82 270
MS.gene058935.t1 MTR_5g082140 38.022 455 210 11 6 436 7 413 2.44e-82 268
MS.gene058935.t1 MTR_2g006270 38.131 396 184 12 1 376 3 357 1.86e-77 255
MS.gene058935.t1 MTR_1g058210 35.211 426 220 10 6 411 7 396 4.92e-77 254
MS.gene058935.t1 MTR_4g124900 38.000 400 191 10 6 383 18 382 2.10e-74 259
MS.gene058935.t1 MTR_4g124900 38.000 400 191 10 6 383 18 382 2.44e-74 260
MS.gene058935.t1 MTR_2g018690 39.012 405 187 10 2 381 13 382 1.72e-73 255
MS.gene058935.t1 MTR_7g062540 28.732 710 383 20 5 646 8 662 3.04e-73 250
MS.gene058935.t1 MTR_3g064050 39.098 399 182 9 5 378 20 382 5.07e-73 253
MS.gene058935.t1 MTR_8g100050 38.363 391 188 7 2 371 50 408 7.34e-73 250
MS.gene058935.t1 MTR_5g076270 39.098 399 182 9 5 378 18 380 2.77e-72 250
MS.gene058935.t1 MTR_2g014770 38.000 400 179 10 11 375 53 418 3.72e-72 245
MS.gene058935.t1 MTR_8g100050 38.363 391 188 7 2 371 50 408 4.42e-72 249
MS.gene058935.t1 MTR_4g088210 39.633 381 163 10 4 352 31 376 4.45e-72 247
MS.gene058935.t1 MTR_4g088210 39.633 381 163 10 4 352 31 376 7.25e-72 247
MS.gene058935.t1 MTR_2g014770 38.000 400 179 10 11 375 53 418 1.44e-71 245
MS.gene058935.t1 MTR_8g079492 38.366 404 190 10 2 381 13 381 1.58e-71 249
MS.gene058935.t1 MTR_8g079492 38.366 404 190 10 2 381 13 381 1.66e-71 249
MS.gene058935.t1 MTR_2g093740 39.702 403 179 12 11 381 56 426 3.87e-71 244
MS.gene058935.t1 MTR_5g040740 41.246 337 141 9 8 330 9 302 1.54e-70 235
MS.gene058935.t1 MTR_2g005240 40.054 372 160 9 11 355 23 358 1.86e-70 242
MS.gene058935.t1 MTR_2g093740 39.702 403 179 12 11 381 56 426 1.92e-70 244
MS.gene058935.t1 MTR_2g093740 39.702 403 179 12 11 381 56 426 3.85e-70 244
MS.gene058935.t1 MTR_8g027440 31.259 675 351 21 11 639 29 636 5.86e-70 241
MS.gene058935.t1 MTR_2g043250 38.275 371 176 8 6 354 18 357 7.13e-70 247
MS.gene058935.t1 MTR_4g021580 39.130 391 176 11 9 373 17 371 2.88e-69 238
MS.gene058935.t1 MTR_4g021580 39.130 391 176 11 9 373 17 371 3.48e-69 238
MS.gene058935.t1 MTR_2g093740 38.462 416 179 13 11 381 56 439 2.79e-67 234
MS.gene058935.t1 MTR_2g093740 38.462 416 179 13 11 381 56 439 6.26e-67 234
MS.gene058935.t1 MTR_4g060460 38.667 375 165 9 11 352 54 396 6.54e-67 234
MS.gene058935.t1 MTR_4g060460 38.667 375 165 9 11 352 54 396 6.61e-67 235
MS.gene058935.t1 MTR_2g093740 38.462 416 179 13 11 381 56 439 1.24e-66 234
MS.gene058935.t1 MTR_8g101360 38.978 372 172 7 8 355 28 368 2.24e-66 237
MS.gene058935.t1 MTR_1g024025 38.978 372 169 9 6 352 38 376 1.03e-65 236
MS.gene058935.t1 MTR_2g006380 36.216 370 165 12 8 353 17 339 5.67e-65 222
MS.gene058935.t1 MTR_5g060780 34.959 369 176 11 8 353 9 336 7.60e-55 193
MS.gene058935.t1 MTR_8g079492 39.157 332 149 8 68 381 3 299 1.89e-54 200
MS.gene058935.t1 MTR_5g061890 34.688 369 177 11 8 353 9 336 2.13e-54 191
MS.gene058935.t1 MTR_5g460920 34.688 369 177 11 8 353 9 336 8.75e-54 190
MS.gene058935.t1 MTR_5g060630 32.258 403 180 13 6 353 7 371 4.87e-51 186
MS.gene058935.t1 MTR_5g460740 32.258 403 180 13 6 353 7 371 4.87e-51 186
MS.gene058935.t1 MTR_5g062970 40.291 206 102 2 11 204 38 234 2.92e-49 172
MS.gene058935.t1 MTR_2g093740 39.159 309 141 7 89 381 19 296 1.26e-48 181
MS.gene058935.t1 MTR_2g093740 39.159 309 141 7 89 381 19 296 1.99e-48 181
MS.gene058935.t1 MTR_2g093740 37.578 322 141 8 89 381 19 309 3.50e-45 171
MS.gene058935.t1 MTR_2g093740 37.578 322 141 8 89 381 19 309 4.85e-45 171
MS.gene058935.t1 MTR_8g446900 29.412 340 194 5 50 375 5 312 2.03e-40 152
MS.gene058935.t1 MTR_5g062960 31.579 190 89 5 263 435 2 167 1.87e-17 81.6
MS.gene058935.t1 MTR_5g060770 32.886 149 88 4 56 202 6 144 1.41e-16 82.4
MS.gene058935.t1 MTR_8g023990 38.614 101 60 2 103 203 167 265 4.49e-12 69.3
MS.gene058935.t1 MTR_1g058350 35.659 129 79 3 84 208 51 179 6.73e-11 64.7
MS.gene058935.t1 MTR_1g093600 30.822 146 86 3 85 216 170 314 8.20e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058935.t1 AT2G28350 56.927 729 222 20 3 676 2 693 0.0 724
MS.gene058935.t1 AT4G30080 55.620 685 230 16 5 646 13 666 0.0 698
MS.gene058935.t1 AT2G28350 56.757 703 212 20 3 650 2 667 0.0 692
MS.gene058935.t1 AT1G77850 37.655 563 289 15 5 526 13 554 1.40e-107 338
MS.gene058935.t1 AT1G77850 37.655 563 289 15 5 526 13 554 1.45e-107 338
MS.gene058935.t1 AT1G59750 32.392 673 338 21 11 639 22 621 4.26e-77 260
MS.gene058935.t1 AT1G59750 32.392 673 338 21 11 639 22 621 4.26e-77 260
MS.gene058935.t1 AT1G59750 32.292 672 337 21 11 639 22 618 1.18e-76 259
MS.gene058935.t1 AT5G37020 39.895 381 174 7 3 359 14 363 1.37e-75 258
MS.gene058935.t1 AT5G37020 39.895 381 174 7 3 359 14 363 3.08e-75 258
MS.gene058935.t1 AT4G23980 30.735 667 347 19 11 639 12 601 6.05e-72 245
MS.gene058935.t1 AT1G30330 39.109 404 186 10 3 381 14 382 1.18e-71 250
MS.gene058935.t1 AT1G19220 37.157 401 195 10 5 383 17 382 1.29e-71 252
MS.gene058935.t1 AT1G30330 38.653 401 187 9 5 381 19 384 1.89e-71 249
MS.gene058935.t1 AT1G30330 38.653 401 187 9 5 381 19 384 1.89e-71 249
MS.gene058935.t1 AT5G60450 38.155 401 183 8 2 371 32 398 7.65e-71 245
MS.gene058935.t1 AT5G60450 38.520 392 176 8 11 371 65 422 2.70e-70 244
MS.gene058935.t1 AT1G59750 39.086 394 182 9 11 381 22 380 3.33e-70 241
MS.gene058935.t1 AT2G33860 36.160 401 193 10 11 382 54 420 1.02e-69 239
MS.gene058935.t1 AT5G62000 37.905 401 178 10 4 371 48 410 3.13e-69 242
MS.gene058935.t1 AT5G62000 37.905 401 178 10 4 371 48 410 4.47e-69 242
MS.gene058935.t1 AT5G62000 37.905 401 178 10 4 371 48 410 4.47e-69 242
MS.gene058935.t1 AT5G62000 37.905 401 178 10 4 371 48 410 4.47e-69 242
MS.gene058935.t1 AT5G62000 37.905 401 178 10 4 371 48 410 4.47e-69 242
MS.gene058935.t1 AT5G20730 36.500 400 197 10 6 383 19 383 1.97e-68 243
MS.gene058935.t1 AT2G46530 37.922 385 160 11 11 367 21 354 1.99e-67 232
MS.gene058935.t1 AT5G20730 36.409 401 197 11 6 383 19 384 2.80e-67 240
MS.gene058935.t1 AT2G46530 37.922 385 160 11 11 367 42 375 3.17e-67 232
MS.gene058935.t1 AT5G20730 36.409 401 197 11 6 383 19 384 3.35e-67 239
MS.gene058935.t1 AT4G23980 38.919 370 167 9 11 356 12 346 9.24e-67 231
MS.gene058935.t1 AT1G19850 37.838 370 173 9 8 352 40 377 8.71e-65 230
MS.gene058935.t1 AT1G19850 37.838 370 173 9 8 352 51 388 9.02e-65 230
MS.gene058935.t1 AT3G61830 37.534 365 170 9 11 352 25 354 1.15e-63 222
MS.gene058935.t1 AT1G34410 28.333 660 345 19 11 639 27 589 1.48e-61 216
MS.gene058935.t1 AT1G34310 28.030 660 347 19 11 639 27 589 4.89e-59 209
MS.gene058935.t1 AT1G35240 28.376 659 332 21 11 639 27 575 1.07e-57 206
MS.gene058935.t1 AT1G34390 27.436 667 354 21 11 646 27 594 2.71e-57 204
MS.gene058935.t1 AT1G35520 28.228 666 338 21 11 639 27 589 8.95e-57 203
MS.gene058935.t1 AT1G35540 34.987 383 171 11 11 366 27 358 1.70e-52 191
MS.gene058935.t1 AT3G61830 37.618 319 147 8 51 352 20 303 1.59e-51 187
MS.gene058935.t1 AT5G37020 41.304 276 113 6 102 359 24 268 1.30e-50 188
MS.gene058935.t1 AT1G34170 33.421 380 183 13 11 366 25 358 8.08e-49 179
MS.gene058935.t1 AT2G33860 36.301 292 139 5 108 382 2 263 9.17e-47 172
MS.gene058935.t1 AT2G46530 37.184 277 113 7 107 367 36 267 7.16e-44 165
MS.gene058935.t1 AT1G34170 40.952 210 110 6 11 211 25 229 4.36e-43 162
MS.gene058935.t1 AT1G34170 40.952 210 110 6 11 211 25 229 2.20e-42 162
MS.gene058935.t1 AT1G43950 41.176 204 105 5 11 207 27 222 2.66e-40 147
MS.gene058935.t1 AT1G13260 36.508 126 72 4 84 205 166 287 1.24e-12 70.1
MS.gene058935.t1 AT2G36080 34.043 141 85 4 103 238 33 170 1.56e-12 68.2
MS.gene058935.t1 AT2G36080 37.838 111 63 3 103 208 33 142 1.79e-12 66.6
MS.gene058935.t1 AT2G36080 37.838 111 63 3 103 208 33 142 1.79e-12 66.6
MS.gene058935.t1 AT2G36080 34.043 141 85 4 103 238 33 170 1.98e-12 68.2
MS.gene058935.t1 AT3G25730 36.275 102 61 2 108 205 183 284 1.12e-11 67.0
MS.gene058935.t1 AT2G46870 35.965 114 67 3 100 208 27 139 1.68e-11 66.2
MS.gene058935.t1 AT1G01030 35.455 110 65 2 103 207 51 159 1.74e-11 66.6
MS.gene058935.t1 AT1G01030 35.455 110 65 2 103 207 51 159 2.31e-11 66.2
MS.gene058935.t1 AT4G01500 38.462 91 51 2 108 197 36 122 2.57e-11 66.2

Find 137 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATCGTCTCTCGATTATT+TGG 0.140943 2.3:-7393247 None:intergenic
GAAAATACTTCATCAGTTTC+AGG 0.152637 2.3:-7391302 None:intergenic
GCACAATCCAACGTTGATTT+TGG 0.154632 2.3:+7391215 MS.gene058935:CDS
CGCTCCTGCCGCAGGCATTC+AGG 0.178149 2.3:+7393147 MS.gene058935:CDS
ATACAACACAAAGGGTTAAA+AGG 0.216528 2.3:-7393103 None:intergenic
TCGAAACCGAAGATTCTTCT+AGG 0.244012 2.3:+7392029 MS.gene058935:CDS
GGGAACTATTTCTTCTGTTC+AGG 0.264499 2.3:+7392066 MS.gene058935:CDS
TTCAAGCTCTGAATTTCTTA+AGG 0.295501 2.3:-7391342 None:intergenic
TTGACAATTCTGATGGATTC+AGG 0.309644 2.3:+7393937 MS.gene058935:CDS
TTCACATTGTGTAGTAAATC+TGG 0.325303 2.3:-7392926 None:intergenic
TTGAGAGAGGAGAATAAGTT+GGG 0.327890 2.3:+7391821 MS.gene058935:CDS
AATTGTGGTCTTGGACCTTA+TGG 0.329009 2.3:+7391779 MS.gene058935:CDS
AGAAAACTGGCTAAGATGTT+TGG 0.333734 2.3:+7393694 MS.gene058935:CDS
ATGAGAATTCAATGGTGTTC+TGG 0.334279 2.3:+7391986 MS.gene058935:CDS
TGAAGAACTTTATAGAAAAC+TGG 0.335874 2.3:+7393681 MS.gene058935:CDS
ACACCTTCTGGATGGAGTTC+TGG 0.337274 2.3:+7391749 MS.gene058935:CDS
TTTGAGAGAGGAGAATAAGT+TGG 0.338801 2.3:+7391820 MS.gene058935:CDS
GCGAAGAGAGGGATTGTTAA+TGG 0.339338 2.3:+7391719 MS.gene058935:CDS
GGAGCCAGGCATGCTCAAAT+TGG 0.343033 2.3:+7393169 MS.gene058935:CDS
TCAAGCTCTGAATTTCTTAA+GGG 0.365482 2.3:-7391341 None:intergenic
TTCTAGGATTAGTTGGTTCA+TGG 0.372148 2.3:+7392045 MS.gene058935:CDS
AATGGATTGGAAACACCTTC+TGG 0.376276 2.3:+7391737 MS.gene058935:CDS
TCAAATTGGAATATCTTTAT+CGG 0.377207 2.3:+7393183 MS.gene058935:CDS
TTTCTTTGCTCTTATTATCA+TGG 0.379754 2.3:-7393294 None:intergenic
ACTGAAATTTGTTGTTGTTA+AGG 0.379784 2.3:-7393213 None:intergenic
AAAATGTTGGTATTTGAAAC+TGG 0.386775 2.3:-7393072 None:intergenic
TTTGTGTTGTATATCTTCTT+CGG 0.389379 2.3:+7393114 MS.gene058935:CDS
AAATTCTCACAAGAGAAGTT+TGG 0.389679 2.3:+7393342 MS.gene058935:CDS
GTACTCTATCGCGATGCAAC+AGG 0.393430 2.3:+7393745 MS.gene058935:CDS
AGGATGTTCACGGTGAGGTT+TGG 0.394252 2.3:+7391546 MS.gene058935:CDS
AAGATTCTTCTAGGATTAGT+TGG 0.415313 2.3:+7392038 MS.gene058935:CDS
TGCTAGTAATCAAACATTTG+AGG 0.416661 2.3:+7391898 MS.gene058935:CDS
GCTCCTGCCGCAGGCATTCA+GGG 0.419621 2.3:+7393148 MS.gene058935:CDS
AGGAGGCATTTGTTAACAAC+TGG 0.420761 2.3:+7391599 MS.gene058935:CDS
AAGTCCATGGTTGGTCGAAT+TGG 0.421393 2.3:+7392955 MS.gene058935:CDS
GCTCCCTGAATGCCTGCGGC+AGG 0.423621 2.3:-7393151 None:intergenic
ATATCATGTCTGTTGACTAT+AGG 0.423697 2.3:+7393319 MS.gene058935:CDS
ATTAGATACTGGTCATTGTA+AGG 0.424326 2.3:+7393600 MS.gene058935:CDS
ACGGTGAGGTTTGGAAGTTT+AGG 0.424396 2.3:+7391555 MS.gene058935:CDS
GGTAATGGAAATTGTGGTCT+TGG 0.431909 2.3:+7391770 MS.gene058935:CDS
ATTTGCAGGGTTTGTATCAC+AGG 0.434573 2.3:+7394071 MS.gene058935:intron
GAGAGGGATTGTTAATGGAT+TGG 0.434835 2.3:+7391724 MS.gene058935:CDS
TGGCAACTTGGATTAGATAC+TGG 0.435835 2.3:+7393589 MS.gene058935:CDS
AACAACAACAAATTTCAGTT+AGG 0.435844 2.3:+7393217 MS.gene058935:CDS
TTCAATGGTGTTCTGGGATG+AGG 0.437710 2.3:+7391993 MS.gene058935:CDS
ACCAACACAAGACAAGTCTA+AGG 0.439710 2.3:-7393653 None:intergenic
AAAATACTTCATCAGTTTCA+GGG 0.442229 2.3:-7391301 None:intergenic
TGAGAATTCAATGGTGTTCT+GGG 0.446818 2.3:+7391987 MS.gene058935:CDS
TTCTTCCTTGGTGGTGAGAA+GGG 0.447097 2.3:-7393007 None:intergenic
TTTCTTCCTTGGTGGTGAGA+AGG 0.447588 2.3:-7393008 None:intergenic
CCGCAGGCATTCAGGGAGCC+AGG 0.455283 2.3:+7393155 MS.gene058935:CDS
AAAGCTTAGATCCACAACTA+TGG 0.458962 2.3:+7391111 MS.gene058935:CDS
ACCTTAGACTTGTCTTGTGT+TGG 0.459246 2.3:+7393652 MS.gene058935:CDS
CAACTATGGCACGCATGTGC+TGG 0.459997 2.3:+7391125 MS.gene058935:CDS
TGTGTTGTTGTCCAAGAAAA+AGG 0.460383 2.3:+7393465 MS.gene058935:CDS
TAACACAACTGCAGGTCACT+TGG 0.460425 2.3:+7392897 MS.gene058935:intron
ATTTGTTGCTCAGTGAGAAT+TGG 0.462091 2.3:-7393418 None:intergenic
TTCGCAATCACCGTCTGAAC+CGG 0.462939 2.3:-7391524 None:intergenic
TTTGCTCTTATTATCATGGT+TGG 0.466889 2.3:-7393290 None:intergenic
TACAACACAAAGGGTTAAAA+GGG 0.478847 2.3:-7393102 None:intergenic
GTTGTTAACAAATGCCTCCT+TGG 0.484302 2.3:-7391596 None:intergenic
TATTCCAATTTGAGCATGCC+TGG 0.486937 2.3:-7393173 None:intergenic
CAGGCAGCAAAGATACTAGA+AGG 0.487275 2.3:+7393956 MS.gene058935:CDS
TCTAGGATTAGTTGGTTCAT+GGG 0.488794 2.3:+7392046 MS.gene058935:CDS
ACAGGTGCTGTTAAACAAAC+TGG 0.490968 2.3:+7393763 MS.gene058935:CDS
AATTATAACGCTCCTGCCGC+AGG 0.493589 2.3:+7393139 MS.gene058935:CDS
ACTAATCCTAGAAGAATCTT+CGG 0.501263 2.3:-7392035 None:intergenic
AAAGTCTTTGCAAAAGATGC+AGG 0.501554 2.3:-7391407 None:intergenic
AAGTTTAGGCATATCTATAG+AGG 0.501773 2.3:+7391569 MS.gene058935:CDS
AATCCGGATGTTGTGGAAAA+CGG 0.502333 2.3:-7393033 None:intergenic
ACAACATCGAGAGGGAAATC+CGG 0.506711 2.3:-7393049 None:intergenic
AAACGGAGTTTCTTCCTTGG+TGG 0.510040 2.3:-7393016 None:intergenic
TGATTACTCGGCTGAGCCAC+CGG 0.514373 2.3:+7391505 MS.gene058935:CDS
TCTTAAACAAAGATGCTCAT+AGG 0.516080 2.3:-7394140 None:intergenic
GCATGTTCTGCATGCCCTTG+TGG 0.516128 2.3:-7391194 None:intergenic
GGCATTTGTTAACAACTGGT+TGG 0.516900 2.3:+7391603 MS.gene058935:CDS
GGAAAACGGAGTTTCTTCCT+TGG 0.523736 2.3:-7393019 None:intergenic
ATCGTTTCGGCACAGTATCT+AGG 0.523934 2.3:-7391470 None:intergenic
TCTGGATGGAGTTCTGGTAA+TGG 0.531132 2.3:+7391755 MS.gene058935:CDS
AAGAAGATATACAACACAAA+GGG 0.535342 2.3:-7393111 None:intergenic
AGAGGGAAATCCGGATGTTG+TGG 0.540838 2.3:-7393040 None:intergenic
AAACTGGTGAAGAACCCTTC+AGG 0.541832 2.3:+7393779 MS.gene058935:CDS
GTATTCGTCGCGCGAAGAGA+GGG 0.550772 2.3:+7391708 MS.gene058935:CDS
GGCTGAGCCACCGGTTCAGA+CGG 0.555712 2.3:+7391514 MS.gene058935:CDS
TTAGATGCATCAAATAAGAC+AGG 0.558939 2.3:+7394116 MS.gene058935:CDS
AAAGGGTTGCCTGAAAATGT+TGG 0.562489 2.3:-7393085 None:intergenic
GCACATGCGTGCCATAGTTG+TGG 0.562709 2.3:-7391122 None:intergenic
TCTGATGCAAACAATGGTGG+AGG 0.563598 2.3:+7391437 MS.gene058935:CDS
GATACCAATTCGACCAACCA+TGG 0.567114 2.3:-7392959 None:intergenic
AACACAACTGCAGGTCACTT+GGG 0.568086 2.3:+7392898 MS.gene058935:intron
CTATGGCACGCATGTGCTGG+AGG 0.570767 2.3:+7391128 MS.gene058935:CDS
GGGTTTGTATCACAGGAACT+AGG 0.573351 2.3:+7394078 MS.gene058935:intron
GTGTTTCTGAGAGGTGAAAG+TGG 0.574136 2.3:+7391671 MS.gene058935:CDS
GATTGGAAACACCTTCTGGA+TGG 0.576113 2.3:+7391741 MS.gene058935:CDS
TGAAACTGGACAACATCGAG+AGG 0.579890 2.3:-7393058 None:intergenic
GCAATCACCGTCTGAACCGG+TGG 0.583092 2.3:-7391521 None:intergenic
ACCACTCATCCTCTGTAGAG+TGG 0.584023 2.3:+7391256 MS.gene058935:CDS
TGAGAGAGGAGAATAAGTTG+GGG 0.584787 2.3:+7391822 MS.gene058935:CDS
GAAGAATCTTCGGTTTCGAA+TGG 0.590530 2.3:-7392025 None:intergenic
GAAGTCTTAATACAAAACTC+AGG 0.592108 2.3:-7391947 None:intergenic
AGAATCTCCAAAATCAACGT+TGG 0.592692 2.3:-7391222 None:intergenic
GTGATTGCGAAGGATGTTCA+CGG 0.594396 2.3:+7391536 MS.gene058935:CDS
GAGAGAGGAGAATAAGTTGG+GGG 0.597200 2.3:+7391823 MS.gene058935:CDS
TGTGGTCTTGGACCTTATGG+TGG 0.601918 2.3:+7391782 MS.gene058935:CDS
AAAGTCAGCACTAGCACTAG+TGG 0.602500 2.3:-7393563 None:intergenic
AACTCAGGAGTACTTGCTCT+AGG 0.603509 2.3:-7391932 None:intergenic
GGTATTCGTCGCGCGAAGAG+AGG 0.605126 2.3:+7391707 MS.gene058935:CDS
TGCGAAGGATGTTCACGGTG+AGG 0.610344 2.3:+7391541 MS.gene058935:CDS
GCACGCATGTGCTGGAGGGA+TGG 0.614096 2.3:+7391133 MS.gene058935:CDS
TTCTTGGAGTCAGAGGATGT+TGG 0.618317 2.3:+7393625 MS.gene058935:CDS
ATGTGAAGCGAGTAAGTCCA+TGG 0.621045 2.3:+7392942 MS.gene058935:CDS
CAATCTGATGCAAACAATGG+TGG 0.622207 2.3:+7391434 MS.gene058935:CDS
GCCACTCTACAGAGGATGAG+TGG 0.626388 2.3:-7391257 None:intergenic
GAAGCGAGTAAGTCCATGGT+TGG 0.628522 2.3:+7392946 MS.gene058935:CDS
CTTGAAAATGATGATTCTGA+TGG 0.628837 2.3:+7391359 MS.gene058935:CDS
GGTTCAGACGGTGATTGCGA+AGG 0.635341 2.3:+7391526 MS.gene058935:CDS
AGTGAGTGGTGAATCAGTGA+AGG 0.641115 2.3:+7391859 MS.gene058935:CDS
GAAGAAGATATACAACACAA+AGG 0.641708 2.3:-7393112 None:intergenic
CCTGGCTCCCTGAATGCCTG+CGG 0.642327 2.3:-7393155 None:intergenic
AGAGAGGAGAATAAGTTGGG+GGG 0.643897 2.3:+7391824 MS.gene058935:CDS
CTGATGCAAACAATGGTGGA+GGG 0.644135 2.3:+7391438 MS.gene058935:CDS
AGTTCTGGTAATGGAAATTG+TGG 0.651495 2.3:+7391764 MS.gene058935:CDS
AATGATGATTCTGATGGTGA+TGG 0.651505 2.3:+7391365 MS.gene058935:CDS
GGTGGAAGAGTGAAAGTGAG+TGG 0.652214 2.3:+7391845 MS.gene058935:CDS
TTACCAGAACTCCATCCAGA+AGG 0.662357 2.3:-7391752 None:intergenic
GATTCTATTGTGTTTCTGAG+AGG 0.663178 2.3:+7391662 MS.gene058935:CDS
GGAACTAGGAATGCTGAACG+TGG 0.666679 2.3:+7394092 MS.gene058935:CDS
TATGGCACGCATGTGCTGGA+GGG 0.669654 2.3:+7391129 MS.gene058935:CDS
GAAACTGGACAACATCGAGA+GGG 0.678914 2.3:-7393057 None:intergenic
TCACAGAAGCCACTCTACAG+AGG 0.682462 2.3:-7391265 None:intergenic
ACTCTACAGAGGATGAGTGG+TGG 0.690773 2.3:-7391254 None:intergenic
AAGCTGCTATGAGAATTCAA+TGG 0.696903 2.3:+7391978 MS.gene058935:CDS
ACACAATCTGATGCAAACAA+TGG 0.698582 2.3:+7391431 MS.gene058935:CDS
TCAGCCGAGTAATCAAGCCG+AGG 0.714702 2.3:-7391497 None:intergenic
TCGCACCCTTCTCACCACCA+AGG 0.717374 2.3:+7393002 MS.gene058935:CDS
TCTATAGAGGAACACCAAGG+AGG 0.745721 2.3:+7391582 MS.gene058935:CDS
ATATCTATAGAGGAACACCA+AGG 0.792807 2.3:+7391579 MS.gene058935:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATGTAAAATAAAATTCT+TGG + chr2.3:7392576-7392595 MS.gene058935:intron 10.0%
!! GAAAAATATTCATATTCATA+TGG - chr2.3:7393830-7393849 None:intergenic 15.0%
!! TTAATCCATGAATATATTTA+TGG + chr2.3:7392604-7392623 MS.gene058935:intron 15.0%
!!! TTCTGTTTTTTATTTTGTTT+TGG + chr2.3:7392186-7392205 MS.gene058935:intron 15.0%
!! ACACTAACTGAAATAATATT+TGG + chr2.3:7392422-7392441 MS.gene058935:intron 20.0%
!! ATTCAATATTTACTAGAAAC+TGG - chr2.3:7392379-7392398 None:intergenic 20.0%
!! TAATTATTAGTTAGTGTCTT+TGG + chr2.3:7394009-7394028 MS.gene058935:intron 20.0%
!! TACAACCATAAATATATTCA+TGG - chr2.3:7392612-7392631 None:intergenic 20.0%
!! TATGTATAATGTATAACCAA+TGG + chr2.3:7392335-7392354 MS.gene058935:intron 20.0%
!! TCAAATTGGAATATCTTTAT+CGG + chr2.3:7393183-7393202 MS.gene058935:CDS 20.0%
!! TTGTTGAATTATTATTTGCA+GGG + chr2.3:7394058-7394077 MS.gene058935:intron 20.0%
!! TTTGTTGAATTATTATTTGC+AGG + chr2.3:7394057-7394076 MS.gene058935:intron 20.0%
!!! ATCTAAAATACTCTTGTTTA+TGG + chr2.3:7392494-7392513 MS.gene058935:intron 20.0%
!!! TGTTTATATTTAAGACTAGA+GGG + chr2.3:7392770-7392789 MS.gene058935:intron 20.0%
!!! TTGTTTATATTTAAGACTAG+AGG + chr2.3:7392769-7392788 MS.gene058935:intron 20.0%
! AAAAAGATTGACAATTCTGA+TGG + chr2.3:7393930-7393949 MS.gene058935:CDS 25.0%
! AAAATACTTCATCAGTTTCA+GGG - chr2.3:7391304-7391323 None:intergenic 25.0%
! AAACAAGAAAAATACCTGAA+GGG - chr2.3:7393796-7393815 None:intergenic 25.0%
! AACAACAACAAATTTCAGTT+AGG + chr2.3:7393217-7393236 MS.gene058935:CDS 25.0%
! AACAACCTTGATTGAATTTA+TGG + chr2.3:7392871-7392890 MS.gene058935:intron 25.0%
! AAGAAGATATACAACACAAA+GGG - chr2.3:7393114-7393133 None:intergenic 25.0%
! AATATTTGGTATTTACCTAC+CGG + chr2.3:7392436-7392455 MS.gene058935:intron 25.0%
! GAAAAACAAATTCCAAACAT+AGG - chr2.3:7392169-7392188 None:intergenic 25.0%
! TATTGCCATAAATTCAATCA+AGG - chr2.3:7392879-7392898 None:intergenic 25.0%
! TGAAGAACTTTATAGAAAAC+TGG + chr2.3:7393681-7393700 MS.gene058935:CDS 25.0%
! TTTCTTTGCTCTTATTATCA+TGG - chr2.3:7393297-7393316 None:intergenic 25.0%
! TTTGTGTTGTATATCTTCTT+CGG + chr2.3:7393114-7393133 MS.gene058935:CDS 25.0%
!! AAAATGTTGGTATTTGAAAC+TGG - chr2.3:7393075-7393094 None:intergenic 25.0%
!! ACGTAAACTTTTTACATTGT+CGG + chr2.3:7393874-7393893 MS.gene058935:intron 25.0%
!! GTTTATATTTAAGACTAGAG+GGG + chr2.3:7392771-7392790 MS.gene058935:intron 25.0%
!! TTTCAAATACCAACATTTTC+AGG + chr2.3:7393076-7393095 MS.gene058935:CDS 25.0%
!!! AAAGACTCTTTTTTAGAGTT+TGG + chr2.3:7392292-7392311 MS.gene058935:intron 25.0%
!!! ACTGAAATTTGTTGTTGTTA+AGG - chr2.3:7393216-7393235 None:intergenic 25.0%
!!! ATTTTCAAGCTGTTTTGTTA+AGG + chr2.3:7392252-7392271 MS.gene058935:intron 25.0%
AAATTCTCACAAGAGAAGTT+TGG + chr2.3:7393342-7393361 MS.gene058935:CDS 30.0%
AAGTTTAGGCATATCTATAG+AGG + chr2.3:7391569-7391588 MS.gene058935:CDS 30.0%
ACTAATCCTAGAAGAATCTT+CGG - chr2.3:7392038-7392057 None:intergenic 30.0%
AGCAAACATGCATATGTATT+TGG + chr2.3:7392716-7392735 MS.gene058935:intron 30.0%
ATACAACACAAAGGGTTAAA+AGG - chr2.3:7393106-7393125 None:intergenic 30.0%
ATTAGATACTGGTCATTGTA+AGG + chr2.3:7393600-7393619 MS.gene058935:CDS 30.0%
CTTGAAAATGATGATTCTGA+TGG + chr2.3:7391359-7391378 MS.gene058935:CDS 30.0%
GAAAATACTTCATCAGTTTC+AGG - chr2.3:7391305-7391324 None:intergenic 30.0%
GAAACAAGAAAAATACCTGA+AGG - chr2.3:7393797-7393816 None:intergenic 30.0%
GAAGAAGATATACAACACAA+AGG - chr2.3:7393115-7393134 None:intergenic 30.0%
GAAGTCTTAATACAAAACTC+AGG - chr2.3:7391950-7391969 None:intergenic 30.0%
GATATTCATGAATTAAGCCT+TGG - chr2.3:7392477-7392496 None:intergenic 30.0%
GTTGACCAAAAAGCAAAAAT+TGG - chr2.3:7393399-7393418 None:intergenic 30.0%
TACAACACAAAGGGTTAAAA+GGG - chr2.3:7393105-7393124 None:intergenic 30.0%
TGCTAGTAATCAAACATTTG+AGG + chr2.3:7391898-7391917 MS.gene058935:CDS 30.0%
TTAGATGCATCAAATAAGAC+AGG + chr2.3:7394116-7394135 MS.gene058935:CDS 30.0%
TTCACATTGTGTAGTAAATC+TGG - chr2.3:7392929-7392948 None:intergenic 30.0%
TTTGCTCTTATTATCATGGT+TGG - chr2.3:7393293-7393312 None:intergenic 30.0%
! AAGTGTTTTACTTTCCACAA+GGG + chr2.3:7391180-7391199 MS.gene058935:CDS 30.0%
! ATATCATGTCTGTTGACTAT+AGG + chr2.3:7393319-7393338 MS.gene058935:CDS 30.0%
! TCTTATTTCAAACAAGCGAA+TGG + chr2.3:7392535-7392554 MS.gene058935:intron 30.0%
!! AAAGTGTTTTACTTTCCACA+AGG + chr2.3:7391179-7391198 MS.gene058935:CDS 30.0%
!! AAGATTCTTCTAGGATTAGT+TGG + chr2.3:7392038-7392057 MS.gene058935:CDS 30.0%
!! AATACTCTTGTTCTAGAGTT+TGG + chr2.3:7392655-7392674 MS.gene058935:intron 30.0%
!! AGACACCAATTTTTGCTTTT+TGG + chr2.3:7393391-7393410 MS.gene058935:CDS 30.0%
!! CCTAATGTTTGTTGTTTACT+CGG + chr2.3:7392682-7392701 MS.gene058935:intron 30.0%
!! CTAATGTTTGTTGTTTACTC+GGG + chr2.3:7392683-7392702 MS.gene058935:intron 30.0%
!! TCAAGCTCTGAATTTCTTAA+GGG - chr2.3:7391344-7391363 None:intergenic 30.0%
!! TTCAAGCTCTGAATTTCTTA+AGG - chr2.3:7391345-7391364 None:intergenic 30.0%
!!! TTTTTCTGCTTTTTTGAGAG+AGG + chr2.3:7391808-7391827 MS.gene058935:CDS 30.0%
AAAGCTTAGATCCACAACTA+TGG + chr2.3:7391111-7391130 MS.gene058935:CDS 35.0%
AAAGTCTTTGCAAAAGATGC+AGG - chr2.3:7391410-7391429 None:intergenic 35.0%
AAGCATTTGAGCAAAACCAT+TGG - chr2.3:7392354-7392373 None:intergenic 35.0%
AAGCTGCTATGAGAATTCAA+TGG + chr2.3:7391978-7391997 MS.gene058935:CDS 35.0%
ACACAATCTGATGCAAACAA+TGG + chr2.3:7391431-7391450 MS.gene058935:CDS 35.0%
AGAAAAAGGACAAAGAGAAG+TGG + chr2.3:7393479-7393498 MS.gene058935:CDS 35.0%
AGAAAACTGGCTAAGATGTT+TGG + chr2.3:7393694-7393713 MS.gene058935:CDS 35.0%
AGAATCTCCAAAATCAACGT+TGG - chr2.3:7391225-7391244 None:intergenic 35.0%
ATATCTATAGAGGAACACCA+AGG + chr2.3:7391579-7391598 MS.gene058935:CDS 35.0%
ATGAGAATTCAATGGTGTTC+TGG + chr2.3:7391986-7392005 MS.gene058935:CDS 35.0%
CCGAGTAAACAACAAACATT+AGG - chr2.3:7392685-7392704 None:intergenic 35.0%
GAAATCGTCTCTCGATTATT+TGG - chr2.3:7393250-7393269 None:intergenic 35.0%
GATCAAATTGAGCTCAACTA+AGG - chr2.3:7392827-7392846 None:intergenic 35.0%
TGAGAATTCAATGGTGTTCT+GGG + chr2.3:7391987-7392006 MS.gene058935:CDS 35.0%
TTCAGTTAGTGTTCGAACTT+GGG - chr2.3:7392414-7392433 None:intergenic 35.0%
TTGAGAGAGGAGAATAAGTT+GGG + chr2.3:7391821-7391840 MS.gene058935:CDS 35.0%
TTTCAGTTAGTGTTCGAACT+TGG - chr2.3:7392415-7392434 None:intergenic 35.0%
TTTGAGAGAGGAGAATAAGT+TGG + chr2.3:7391820-7391839 MS.gene058935:CDS 35.0%
! AACACTTTTGTGTTCACTGA+TGG - chr2.3:7391167-7391186 None:intergenic 35.0%
! AATGATGATTCTGATGGTGA+TGG + chr2.3:7391365-7391384 MS.gene058935:CDS 35.0%
! ATTTGTTGCTCAGTGAGAAT+TGG - chr2.3:7393421-7393440 None:intergenic 35.0%
! CTTCTCTTTGTCCTTTTTCT+TGG - chr2.3:7393479-7393498 None:intergenic 35.0%
! GAAAGTGGAGAACTTTTTGT+TGG + chr2.3:7391686-7391705 MS.gene058935:CDS 35.0%
! GATTCTATTGTGTTTCTGAG+AGG + chr2.3:7391662-7391681 MS.gene058935:CDS 35.0%
! TGGTCATTGTAAGGTTTTCT+TGG + chr2.3:7393609-7393628 MS.gene058935:CDS 35.0%
! TGTGTTGTTGTCCAAGAAAA+AGG + chr2.3:7393465-7393484 MS.gene058935:CDS 35.0%
!! AATCAGAAAAAGCTTGTTGC+AGG + chr2.3:7391638-7391657 MS.gene058935:CDS 35.0%
!! AGTTCTGGTAATGGAAATTG+TGG + chr2.3:7391764-7391783 MS.gene058935:CDS 35.0%
!! TCTAGGATTAGTTGGTTCAT+GGG + chr2.3:7392046-7392065 MS.gene058935:CDS 35.0%
!! TTCTAGGATTAGTTGGTTCA+TGG + chr2.3:7392045-7392064 MS.gene058935:CDS 35.0%
!! TTGACAATTCTGATGGATTC+AGG + chr2.3:7393937-7393956 MS.gene058935:CDS 35.0%
!!! TGTTTTGGAGAACATGTTTG+TGG + chr2.3:7392201-7392220 MS.gene058935:intron 35.0%
AAAGGGTTGCCTGAAAATGT+TGG - chr2.3:7393088-7393107 None:intergenic 40.0%
AAGCCGAGGAAAAATCGTTT+CGG - chr2.3:7391486-7391505 None:intergenic 40.0%
AATCCGGATGTTGTGGAAAA+CGG - chr2.3:7393036-7393055 None:intergenic 40.0%
ACCAACACAAGACAAGTCTA+AGG - chr2.3:7393656-7393675 None:intergenic 40.0%
ACCTTAGACTTGTCTTGTGT+TGG + chr2.3:7393652-7393671 MS.gene058935:CDS 40.0%
AGACTAGAGGGGATTTCATT+TGG + chr2.3:7392782-7392801 MS.gene058935:intron 40.0%
AGGTTGTTGATCCTATTCGT+TGG + chr2.3:7392086-7392105 MS.gene058935:intron 40.0%
ATTTGCAGGGTTTGTATCAC+AGG + chr2.3:7394071-7394090 MS.gene058935:intron 40.0%
CAATCTGATGCAAACAATGG+TGG + chr2.3:7391434-7391453 MS.gene058935:CDS 40.0%
CTACTCTCTTGTCCTATGTT+TGG + chr2.3:7392154-7392173 MS.gene058935:intron 40.0%
GAAGAATCTTCGGTTTCGAA+TGG - chr2.3:7392028-7392047 None:intergenic 40.0%
GTGTCTTTGGATGTGTATGA+AGG + chr2.3:7394022-7394041 MS.gene058935:intron 40.0%
GTTGTTAACAAATGCCTCCT+TGG - chr2.3:7391599-7391618 None:intergenic 40.0%
TATGGCAATAACACAACTGC+AGG + chr2.3:7392889-7392908 MS.gene058935:intron 40.0%
TATTCCAATTTGAGCATGCC+TGG - chr2.3:7393176-7393195 None:intergenic 40.0%
TCGAAACCGAAGATTCTTCT+AGG + chr2.3:7392029-7392048 MS.gene058935:CDS 40.0%
TGAGAGAGGAGAATAAGTTG+GGG + chr2.3:7391822-7391841 MS.gene058935:CDS 40.0%
! AATTGTGGTCTTGGACCTTA+TGG + chr2.3:7391779-7391798 MS.gene058935:CDS 40.0%
! CTAGTGGTAGAAGATTTTGC+TGG - chr2.3:7393550-7393569 None:intergenic 40.0%
! GAGAGGGATTGTTAATGGAT+TGG + chr2.3:7391724-7391743 MS.gene058935:CDS 40.0%
! GGCATTTGTTAACAACTGGT+TGG + chr2.3:7391603-7391622 MS.gene058935:CDS 40.0%
! GGGAACTATTTCTTCTGTTC+AGG + chr2.3:7392066-7392085 MS.gene058935:CDS 40.0%
! TAAGGTTTTCTTGGAGTCAG+AGG + chr2.3:7393618-7393637 MS.gene058935:CDS 40.0%
! TGGCAACTTGGATTAGATAC+TGG + chr2.3:7393589-7393608 MS.gene058935:CDS 40.0%
!! AATGGATTGGAAACACCTTC+TGG + chr2.3:7391737-7391756 MS.gene058935:CDS 40.0%
!! ACAGGTGCTGTTAAACAAAC+TGG + chr2.3:7393763-7393782 MS.gene058935:CDS 40.0%
!! AGGAGGCATTTGTTAACAAC+TGG + chr2.3:7391599-7391618 MS.gene058935:CDS 40.0%
!! GGTAATGGAAATTGTGGTCT+TGG + chr2.3:7391770-7391789 MS.gene058935:CDS 40.0%
!! TTTTCCTCGGCTTGATTACT+CGG + chr2.3:7391493-7391512 MS.gene058935:CDS 40.0%
!!! GCACAATCCAACGTTGATTT+TGG + chr2.3:7391215-7391234 MS.gene058935:CDS 40.0%
AAACGGAGTTTCTTCCTTGG+TGG - chr2.3:7393019-7393038 None:intergenic 45.0%
AAACTGGTGAAGAACCCTTC+AGG + chr2.3:7393779-7393798 MS.gene058935:CDS 45.0%
AAAGTCAGCACTAGCACTAG+TGG - chr2.3:7393566-7393585 None:intergenic 45.0%
AACACAACTGCAGGTCACTT+GGG + chr2.3:7392898-7392917 MS.gene058935:intron 45.0%
ACAACATCGAGAGGGAAATC+CGG - chr2.3:7393052-7393071 None:intergenic 45.0%
ACGGTGAGGTTTGGAAGTTT+AGG + chr2.3:7391555-7391574 MS.gene058935:CDS 45.0%
AGAAGTCTCCAAGGGGAATT+AGG - chr2.3:7392112-7392131 None:intergenic 45.0%
AGTGAGTGGTGAATCAGTGA+AGG + chr2.3:7391859-7391878 MS.gene058935:CDS 45.0%
ATCGTTTCGGCACAGTATCT+AGG - chr2.3:7391473-7391492 None:intergenic 45.0%
ATGTGAAGCGAGTAAGTCCA+TGG + chr2.3:7392942-7392961 MS.gene058935:CDS 45.0%
CAGGCAGCAAAGATACTAGA+AGG + chr2.3:7393956-7393975 MS.gene058935:CDS 45.0%
GAAACTGGACAACATCGAGA+GGG - chr2.3:7393060-7393079 None:intergenic 45.0%
GATACCAATTCGACCAACCA+TGG - chr2.3:7392962-7392981 None:intergenic 45.0%
GATTGGAAACACCTTCTGGA+TGG + chr2.3:7391741-7391760 MS.gene058935:CDS 45.0%
GCGAAGAGAGGGATTGTTAA+TGG + chr2.3:7391719-7391738 MS.gene058935:CDS 45.0%
GGAAAACGGAGTTTCTTCCT+TGG - chr2.3:7393022-7393041 None:intergenic 45.0%
GGGTTTGTATCACAGGAACT+AGG + chr2.3:7394078-7394097 MS.gene058935:intron 45.0%
GTACCTGAAGAAGTCTCCAA+GGG - chr2.3:7392120-7392139 None:intergenic 45.0%
GTGATTGCGAAGGATGTTCA+CGG + chr2.3:7391536-7391555 MS.gene058935:CDS 45.0%
TAACACAACTGCAGGTCACT+TGG + chr2.3:7392897-7392916 MS.gene058935:intron 45.0%
TACCTGAAGAAGTCTCCAAG+GGG - chr2.3:7392119-7392138 None:intergenic 45.0%
TCTATAGAGGAACACCAAGG+AGG + chr2.3:7391582-7391601 MS.gene058935:CDS 45.0%
TCTGATGCAAACAATGGTGG+AGG + chr2.3:7391437-7391456 MS.gene058935:CDS 45.0%
TGAAACTGGACAACATCGAG+AGG - chr2.3:7393061-7393080 None:intergenic 45.0%
TGTACCTGAAGAAGTCTCCA+AGG - chr2.3:7392121-7392140 None:intergenic 45.0%
TTACCAGAACTCCATCCAGA+AGG - chr2.3:7391755-7391774 None:intergenic 45.0%
TTCTTGGAGTCAGAGGATGT+TGG + chr2.3:7393625-7393644 MS.gene058935:CDS 45.0%
TTGGCTATCAAGAGCTTGAC+CGG - chr2.3:7392458-7392477 None:intergenic 45.0%
! AAGTCCATGGTTGGTCGAAT+TGG + chr2.3:7392955-7392974 MS.gene058935:CDS 45.0%
! ACTCCGTTTTCCACAACATC+CGG + chr2.3:7393030-7393049 MS.gene058935:CDS 45.0%
! AGAGAGGAGAATAAGTTGGG+GGG + chr2.3:7391824-7391843 MS.gene058935:CDS 45.0%
! CTGATGCAAACAATGGTGGA+GGG + chr2.3:7391438-7391457 MS.gene058935:CDS 45.0%
! GAGAGAGGAGAATAAGTTGG+GGG + chr2.3:7391823-7391842 MS.gene058935:CDS 45.0%
! GTGCCGAAACGATTTTTCCT+CGG + chr2.3:7391480-7391499 MS.gene058935:CDS 45.0%
! GTGTTTCTGAGAGGTGAAAG+TGG + chr2.3:7391671-7391690 MS.gene058935:CDS 45.0%
! TCTGGATGGAGTTCTGGTAA+TGG + chr2.3:7391755-7391774 MS.gene058935:CDS 45.0%
!! AACTCAGGAGTACTTGCTCT+AGG - chr2.3:7391935-7391954 None:intergenic 45.0%
!! GCAGAAAAAGCACCACCATA+AGG - chr2.3:7391797-7391816 None:intergenic 45.0%
!! GCTGACTTTTGTTGGCAACT+TGG + chr2.3:7393577-7393596 MS.gene058935:CDS 45.0%
!! TTCAATGGTGTTCTGGGATG+AGG + chr2.3:7391993-7392012 MS.gene058935:CDS 45.0%
!! TTCTTCCTTGGTGGTGAGAA+GGG - chr2.3:7393010-7393029 None:intergenic 45.0%
!! TTTCTTCCTTGGTGGTGAGA+AGG - chr2.3:7393011-7393030 None:intergenic 45.0%
!!! GTGCTAGTGCTGACTTTTGT+TGG + chr2.3:7393569-7393588 MS.gene058935:CDS 45.0%
AATTATAACGCTCCTGCCGC+AGG + chr2.3:7393139-7393158 MS.gene058935:CDS 50.0%
ACACCTTCTGGATGGAGTTC+TGG + chr2.3:7391749-7391768 MS.gene058935:CDS 50.0%
ACCACTCATCCTCTGTAGAG+TGG + chr2.3:7391256-7391275 MS.gene058935:CDS 50.0%
ACTCTACAGAGGATGAGTGG+TGG - chr2.3:7391257-7391276 None:intergenic 50.0%
AGAGGGAAATCCGGATGTTG+TGG - chr2.3:7393043-7393062 None:intergenic 50.0%
AGGATGTTCACGGTGAGGTT+TGG + chr2.3:7391546-7391565 MS.gene058935:CDS 50.0%
CTATCAAGAGCTTGACCGGT+AGG - chr2.3:7392454-7392473 None:intergenic 50.0%
GAAGCGAGTAAGTCCATGGT+TGG + chr2.3:7392946-7392965 MS.gene058935:CDS 50.0%
GGAACTAGGAATGCTGAACG+TGG + chr2.3:7394092-7394111 MS.gene058935:CDS 50.0%
GGGGAATTAGGCCAACGAAT+AGG - chr2.3:7392100-7392119 None:intergenic 50.0%
GGTGGAAGAGTGAAAGTGAG+TGG + chr2.3:7391845-7391864 MS.gene058935:CDS 50.0%
GTACTCTATCGCGATGCAAC+AGG + chr2.3:7393745-7393764 MS.gene058935:CDS 50.0%
TCACAGAAGCCACTCTACAG+AGG - chr2.3:7391268-7391287 None:intergenic 50.0%
TTCCCCTTGGAGACTTCTTC+AGG + chr2.3:7392114-7392133 MS.gene058935:intron 50.0%
TTCGCAATCACCGTCTGAAC+CGG - chr2.3:7391527-7391546 None:intergenic 50.0%
! GGTCAAGCTCTTGATAGCCA+AGG + chr2.3:7392457-7392476 MS.gene058935:intron 50.0%
! TGTGGTCTTGGACCTTATGG+TGG + chr2.3:7391782-7391801 MS.gene058935:CDS 50.0%
! TTCGTTGGCCTAATTCCCCT+TGG + chr2.3:7392101-7392120 MS.gene058935:intron 50.0%
CAACTATGGCACGCATGTGC+TGG + chr2.3:7391125-7391144 MS.gene058935:CDS 55.0%
GCACATGCGTGCCATAGTTG+TGG - chr2.3:7391125-7391144 None:intergenic 55.0%
GCATGTTCTGCATGCCCTTG+TGG - chr2.3:7391197-7391216 None:intergenic 55.0%
GCCACTCTACAGAGGATGAG+TGG - chr2.3:7391260-7391279 None:intergenic 55.0%
GGAGCCAGGCATGCTCAAAT+TGG + chr2.3:7393169-7393188 MS.gene058935:CDS 55.0%
GGTTCAGACGGTGATTGCGA+AGG + chr2.3:7391526-7391545 MS.gene058935:CDS 55.0%
GTATTCGTCGCGCGAAGAGA+GGG + chr2.3:7391708-7391727 MS.gene058935:CDS 55.0%
TATGGCACGCATGTGCTGGA+GGG + chr2.3:7391129-7391148 MS.gene058935:CDS 55.0%
TCAGCCGAGTAATCAAGCCG+AGG - chr2.3:7391500-7391519 None:intergenic 55.0%
TGATTACTCGGCTGAGCCAC+CGG + chr2.3:7391505-7391524 MS.gene058935:CDS 55.0%
TGCGAAGGATGTTCACGGTG+AGG + chr2.3:7391541-7391560 MS.gene058935:CDS 55.0%
! GAGGAGAATAAGTTGGGGGG+TGG + chr2.3:7391827-7391846 MS.gene058935:CDS 55.0%
CTATGGCACGCATGTGCTGG+AGG + chr2.3:7391128-7391147 MS.gene058935:CDS 60.0%
GCAATCACCGTCTGAACCGG+TGG - chr2.3:7391524-7391543 None:intergenic 60.0%
GGTATTCGTCGCGCGAAGAG+AGG + chr2.3:7391707-7391726 MS.gene058935:CDS 60.0%
TCGCACCCTTCTCACCACCA+AGG + chr2.3:7393002-7393021 MS.gene058935:CDS 60.0%
CCTGGCTCCCTGAATGCCTG+CGG - chr2.3:7393158-7393177 None:intergenic 65.0%
GCACGCATGTGCTGGAGGGA+TGG + chr2.3:7391133-7391152 MS.gene058935:CDS 65.0%
GCTCCTGCCGCAGGCATTCA+GGG + chr2.3:7393148-7393167 MS.gene058935:CDS 65.0%
!! GGCTGAGCCACCGGTTCAGA+CGG + chr2.3:7391514-7391533 MS.gene058935:CDS 65.0%
CCGCAGGCATTCAGGGAGCC+AGG + chr2.3:7393155-7393174 MS.gene058935:CDS 70.0%
CGCTCCTGCCGCAGGCATTC+AGG + chr2.3:7393147-7393166 MS.gene058935:CDS 70.0%
GCTCCCTGAATGCCTGCGGC+AGG - chr2.3:7393154-7393173 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 7391095 7394160 7391095 ID=MS.gene058935
chr2.3 mRNA 7391095 7394160 7391095 ID=MS.gene058935.t1;Parent=MS.gene058935
chr2.3 exon 7391095 7392087 7391095 ID=MS.gene058935.t1.exon1;Parent=MS.gene058935.t1
chr2.3 CDS 7391095 7392087 7391095 ID=cds.MS.gene058935.t1;Parent=MS.gene058935.t1
chr2.3 exon 7392911 7393800 7392911 ID=MS.gene058935.t1.exon2;Parent=MS.gene058935.t1
chr2.3 CDS 7392911 7393800 7392911 ID=cds.MS.gene058935.t1;Parent=MS.gene058935.t1
chr2.3 exon 7393912 7393977 7393912 ID=MS.gene058935.t1.exon3;Parent=MS.gene058935.t1
chr2.3 CDS 7393912 7393977 7393912 ID=cds.MS.gene058935.t1;Parent=MS.gene058935.t1
chr2.3 exon 7394079 7394160 7394079 ID=MS.gene058935.t1.exon4;Parent=MS.gene058935.t1
chr2.3 CDS 7394079 7394160 7394079 ID=cds.MS.gene058935.t1;Parent=MS.gene058935.t1
Gene Sequence

>MS.gene058935

ATGAAAGAAGCTGAGAAAAGCTTAGATCCACAACTATGGCACGCATGTGCTGGAGGGATGGTTCAAATGCCATCAGTGAACACAAAAGTGTTTTACTTTCCACAAGGGCATGCAGAACATGCACAATCCAACGTTGATTTTGGAGATTCTTTCAGAATTCCACCACTCATCCTCTGTAGAGTGGCTTCTGTGAAATTCTTAGCTGACCCTGAAACTGATGAAGTATTTTCAAAGATAACTTTGATTCCCTTAAGAAATTCAGAGCTTGAAAATGATGATTCTGATGGTGATGGTTCAGAGAATTCAGAAAAGCCTGCATCTTTTGCAAAGACTTTGACACAATCTGATGCAAACAATGGTGGAGGGTTCTCTGTTCCTAGATACTGTGCCGAAACGATTTTTCCTCGGCTTGATTACTCGGCTGAGCCACCGGTTCAGACGGTGATTGCGAAGGATGTTCACGGTGAGGTTTGGAAGTTTAGGCATATCTATAGAGGAACACCAAGGAGGCATTTGTTAACAACTGGTTGGAGTAGTTTTGTGAATCAGAAAAAGCTTGTTGCAGGTGATTCTATTGTGTTTCTGAGAGGTGAAAGTGGAGAACTTTTTGTTGGTATTCGTCGCGCGAAGAGAGGGATTGTTAATGGATTGGAAACACCTTCTGGATGGAGTTCTGGTAATGGAAATTGTGGTCTTGGACCTTATGGTGGTGCTTTTTCTGCTTTTTTGAGAGAGGAGAATAAGTTGGGGGGTGGAAGAGTGAAAGTGAGTGGTGAATCAGTGAAGGAAGCTATGAGACTTGCTGCTAGTAATCAAACATTTGAGGTTGTTTATTATCCTAGAGCAAGTACTCCTGAGTTTTGTATTAAGACTTCAGCTGTGAAAGCTGCTATGAGAATTCAATGGTGTTCTGGGATGAGGTTTAAGATGCCATTCGAAACCGAAGATTCTTCTAGGATTAGTTGGTTCATGGGAACTATTTCTTCTGTTCAGGTTGTTGATCCTATTCGTTGGCCTAATTCCCCTTGGAGACTTCTTCAGGTACAACTACTACTGCTACTACTCTCTTGTCCTATGTTTGGAATTTGTTTTTCTGTTTTTTATTTTGTTTTGGAGAACATGTTTGTGGTAATAAGTTTCATTTGAATTTTGATGATATTTTCAAGCTGTTTTGTTAAGGTTCATTTCTTTGAATTGAAAGACTCTTTTTTAGAGTTTGGTTATGTTAATATGTGTATAATATGTATAATGTATAACCAATGGTTTTGCTCAAATGCTTAACCAGTTTCTAGTAAATATTGAATTGATCGAGAGTACCCAAGTTCGAACACTAACTGAAATAATATTTGGTATTTACCTACCGGTCAAGCTCTTGATAGCCAAGGCTTAATTCATGAATATCTAAAATACTCTTGTTTATGGTTGTACTTATCGCTTGTTTCTTATTTCAAACAAGCGAATGGTTAAAACAAAACAAAAAAATTATGTAAAATAAAATTCTTGGAGCTCTTAATCCATGAATATATTTATGGTTGTACTTATTGCTTGTTTCTATGTAAAAATACTCTTGTTCTAGAGTTTGGAATACCTAATGTTTGTTGTTTACTCGGGTTTGTATTTAAGCAAACATGCATATGTATTTGGTCTAAATATAGATCAAATATATTTATATTATTGTTTATATTTAAGACTAGAGGGGATTTCATTTGGTGATTTGATTGTATTCAAACCTTAGTTGAGCTCAATTTGATCATAAAGAAATGCTTGTCATGCAACAACAACCTTGATTGAATTTATGGCAATAACACAACTGCAGGTCACTTGGGACGAACCAGATTTACTACACAATGTGAAGCGAGTAAGTCCATGGTTGGTCGAATTGGTATCAAACATGTCGATGATTCATCTCGCACCCTTCTCACCACCAAGGAAGAAACTCCGTTTTCCACAACATCCGGATTTCCCTCTCGATGTTGTCCAGTTTCAAATACCAACATTTTCAGGCAACCCTTTTAACCCTTTGTGTTGTATATCTTCTTCGGATAATTATAACGCTCCTGCCGCAGGCATTCAGGGAGCCAGGCATGCTCAAATTGGAATATCTTTATCGGATCTTCACCTTAACAACAACAAATTTCAGTTAGGTGTGTTTCCAAATAATCGAGAGACGATTTCTAATGTTAGCAACATAACTACCAACCATGATAATAAGAGCAAAGAAAGTATATCATGTCTGTTGACTATAGGAAATTCTCACAAGAGAAGTTTGGAGATTAAATCTGATAATAATGATAAGAGACACCAATTTTTGCTTTTTGGTCAACCAATTCTCACTGAGCAACAAATCTCTAGAAAATTTTCTAGTGATGATGTGTTGTTGTCCAAGAAAAAGGACAAAGAGAAGTGGTTTTTCAGTGATACTACTCAATCTTCTATTTCTGAACAGTTTTCACCAGCAAAATCTTCTACCACTAGTGCTAGTGCTGACTTTTGTTGGCAACTTGGATTAGATACTGGTCATTGTAAGGTTTTCTTGGAGTCAGAGGATGTTGGAAGAACCTTAGACTTGTCTTGTGTTGGTTCTTATGAAGAACTTTATAGAAAACTGGCTAAGATGTTTGGAATAGAAAGATCTGAGATGTTGAGTCGTGTACTCTATCGCGATGCAACAGGTGCTGTTAAACAAACTGGTGAAGAACCCTTCAGGTATTTTTCTTGTTTCATCTTTTTATCCATATGAATATGAATATTTTTCGAGTTTAATTTATATGCATCGTCGACGTAAACTTTTTACATTGTCGGTTAATTACATTGTAGTGACTTCATGAAGACAGCAAAAAGATTGACAATTCTGATGGATTCAGGCAGCAAAGATACTAGAAGGTGTGATTAAAAAAAAAAACATTGTTATATTTAATTATTAGTTAGTGTCTTTGGATGTGTATGAAGGTACTAAACATTTTTTGTTGAATTATTATTTGCAGGGTTTGTATCACAGGAACTAGGAATGCTGAACGTGGATTAGATGCATCAAATAAGACAGGACCTATGAGCATCTTTGTTTAA

Protein sequence

>MS.gene058935.t1

MKEAEKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVDFGDSFRIPPLILCRVASVKFLADPETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRGESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAFSAFLREENKLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVTWDEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDVVQFQIPTFSGNPFNPLCCISSSDNYNAPAAGIQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETISNVSNITTNHDNKSKESISCLLTIGNSHKRSLEIKSDNNDKRHQFLLFGQPILTEQQISRKFSSDDVLLSKKKDKEKWFFSDTTQSSISEQFSPAKSSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSYEELYRKLAKMFGIERSEMLSRVLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSGSKDTRRVCITGTRNAERGLDASNKTGPMSIFV