Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43984.t1 | RHN80647.1 | 99.1 | 654 | 5 | 1 | 116 | 769 | 116 | 768 | 0.00E+00 | 1336.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43984.t1 | A0A396K270 | 99.1 | 654 | 5 | 1 | 116 | 769 | 116 | 768 | 0.0e+00 | 1336.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene43984 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene43984 | 0.812418 | 4.28E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene43984 | 0.820487 | 6.68E-53 | -1.69E-46 |
| MS.gene055864 | MS.gene43984 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene43984 | 0.823525 | 1.32E-53 | -1.69E-46 |
| MS.gene057155 | MS.gene43984 | 0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene43984 | 0.803802 | 2.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43984.t1 | MTR_2g018850 | 28.796 | 191 | 129 | 3 | 241 | 425 | 261 | 450 | 2.17e-21 | 99.8 |
| MS.gene43984.t1 | MTR_5g081480 | 33.758 | 157 | 83 | 4 | 623 | 768 | 631 | 777 | 4.02e-19 | 93.2 |
| MS.gene43984.t1 | MTR_5g081480 | 28.485 | 165 | 101 | 5 | 243 | 393 | 462 | 623 | 5.04e-12 | 70.1 |
| MS.gene43984.t1 | MTR_7g090610 | 26.786 | 224 | 127 | 4 | 556 | 768 | 1 | 198 | 1.63e-16 | 82.4 |
| MS.gene43984.t1 | MTR_6g462630 | 32.258 | 124 | 67 | 3 | 652 | 768 | 41 | 154 | 4.03e-15 | 75.5 |
| MS.gene43984.t1 | MTR_8g464080 | 22.817 | 355 | 240 | 8 | 396 | 741 | 535 | 864 | 1.49e-14 | 78.2 |
| MS.gene43984.t1 | MTR_8g464800 | 27.273 | 187 | 127 | 4 | 501 | 678 | 1 | 187 | 9.29e-14 | 74.3 |
| MS.gene43984.t1 | MTR_6g086685 | 25.625 | 160 | 115 | 2 | 275 | 431 | 25 | 183 | 5.07e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43984.t1 | AT1G06740 | 55.144 | 729 | 284 | 12 | 59 | 769 | 23 | 726 | 0.0 | 806 |
| MS.gene43984.t1 | AT3G05850 | 40.242 | 579 | 322 | 7 | 197 | 765 | 206 | 770 | 4.62e-132 | 410 |
| MS.gene43984.t1 | AT1G64260 | 25.788 | 539 | 366 | 11 | 187 | 705 | 177 | 701 | 2.54e-45 | 174 |
| MS.gene43984.t1 | AT1G64260 | 25.788 | 539 | 366 | 11 | 187 | 705 | 177 | 701 | 2.54e-45 | 174 |
| MS.gene43984.t1 | AT1G49920 | 24.555 | 562 | 349 | 16 | 195 | 705 | 180 | 717 | 1.17e-36 | 148 |
| MS.gene43984.t1 | AT1G49920 | 24.555 | 562 | 349 | 16 | 195 | 705 | 180 | 717 | 1.17e-36 | 148 |
| MS.gene43984.t1 | AT1G64255 | 23.034 | 534 | 381 | 10 | 193 | 707 | 190 | 712 | 7.32e-34 | 139 |
| MS.gene43984.t1 | AT1G64253 | 25.074 | 339 | 225 | 8 | 405 | 727 | 3 | 328 | 3.33e-27 | 115 |
| MS.gene43984.t1 | AT5G15685 | 23.746 | 299 | 214 | 7 | 178 | 469 | 158 | 449 | 2.10e-22 | 102 |
| MS.gene43984.t1 | AT1G64253 | 23.846 | 260 | 178 | 6 | 479 | 727 | 2 | 252 | 1.99e-16 | 81.6 |
Find 196 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTATTGCATCTGTTTA+TGG | 0.168403 | 1.3:+57060250 | MS.gene43984:CDS |
| GCACGAACTCTCTTCTTTCT+TGG | 0.177659 | 1.3:-57061387 | None:intergenic |
| TGTCGTGGTTGGCAGCTTTA+TGG | 0.180824 | 1.3:+57061135 | MS.gene43984:CDS |
| ATCTCCTTTGGCTTGCAATT+AGG | 0.207117 | 1.3:-57060073 | None:intergenic |
| TCTCCTTTGGCTTGCAATTA+GGG | 0.214532 | 1.3:-57060072 | None:intergenic |
| CCATGCTGGTCAATCTTCTA+TGG | 0.226068 | 1.3:+57060674 | MS.gene43984:CDS |
| CTTGGTCATAATCATGATTT+AGG | 0.227461 | 1.3:+57059260 | MS.gene43984:CDS |
| TTCTGAACCCCATGTAATTC+AGG | 0.260049 | 1.3:+57059718 | MS.gene43984:CDS |
| CAGAGAGATTTGTCAGGAAT+TGG | 0.260559 | 1.3:-57061276 | None:intergenic |
| CATTCCATCATTTGAATTAT+CGG | 0.270583 | 1.3:-57060901 | None:intergenic |
| GAAGAGTTCCACCTCGTCTA+TGG | 0.276100 | 1.3:+57060785 | MS.gene43984:CDS |
| TCTTGACATCGGGGAATTCT+TGG | 0.285938 | 1.3:-57059784 | None:intergenic |
| AAACCTGTGCCCCTCAAAAT+AGG | 0.290357 | 1.3:-57060815 | None:intergenic |
| CTGATCCCAGTTCAATTTCA+TGG | 0.300053 | 1.3:-57059295 | None:intergenic |
| GCTCTCTTTCCTCTTGCATT+TGG | 0.314840 | 1.3:+57060436 | MS.gene43984:CDS |
| CCAAGTCCAGTTCATGTTCA+TGG | 0.316931 | 1.3:-57059373 | None:intergenic |
| AGAACGTGCACGCACTTATC+AGG | 0.326006 | 1.3:+57061029 | MS.gene43984:CDS |
| AACTTCAAATTCAGCTTCAT+TGG | 0.329532 | 1.3:-57061061 | None:intergenic |
| CCAGGTGGTCTGAGTGATTT+AGG | 0.330196 | 1.3:-57061360 | None:intergenic |
| CTCTTCTTTCTTGGTCGTCC+AGG | 0.330996 | 1.3:-57061378 | None:intergenic |
| GACCACAAGTCGCCCCTTCC+TGG | 0.339119 | 1.3:+57059536 | MS.gene43984:CDS |
| TTGCAAGCCAAAGGAGATAT+TGG | 0.339319 | 1.3:+57060078 | MS.gene43984:CDS |
| GAACTAATATAGTCGATATA+AGG | 0.358278 | 1.3:+57061097 | MS.gene43984:CDS |
| ACGAAGAGAATGATGATAAT+TGG | 0.358551 | 1.3:+57060467 | MS.gene43984:CDS |
| AGCTTTAAACAGTTGGATAT+TGG | 0.362474 | 1.3:+57060864 | MS.gene43984:CDS |
| ATCTCTTCCAATATCTCCTT+TGG | 0.363626 | 1.3:-57060085 | None:intergenic |
| TGAATTTGAAGGTAAAGTTA+TGG | 0.364390 | 1.3:+57060723 | MS.gene43984:CDS |
| CTTACAATAATTGAATTTGA+AGG | 0.371194 | 1.3:+57060712 | MS.gene43984:CDS |
| GAAGAGATTCATATGGTTCA+TGG | 0.371388 | 1.3:+57060100 | MS.gene43984:CDS |
| AAATGCATGTCGACCACTCT+TGG | 0.380817 | 1.3:+57060339 | MS.gene43984:CDS |
| AGTTGGATATTGGAAGCATC+TGG | 0.381564 | 1.3:+57060874 | MS.gene43984:CDS |
| GCTAACCACGATTTGATACT+TGG | 0.385839 | 1.3:+57059194 | MS.gene43984:CDS |
| TGTGGAGGAATTTCCCATCT+TGG | 0.388534 | 1.3:+57059989 | MS.gene43984:CDS |
| AATGCATGTCGACCACTCTT+GGG | 0.391293 | 1.3:+57060340 | MS.gene43984:CDS |
| CGAGAACCATGAAATTGAAC+TGG | 0.396240 | 1.3:+57059289 | MS.gene43984:CDS |
| ATCAGCCCACGAGCATCAAT+TGG | 0.397493 | 1.3:+57059313 | MS.gene43984:CDS |
| CTACTGGATTTGATGGTGAT+GGG | 0.406553 | 1.3:+57060413 | MS.gene43984:CDS |
| TATCACAAGATGCTGCATAT+TGG | 0.412893 | 1.3:+57060758 | MS.gene43984:CDS |
| ACAAACCCATGAACATGAAC+TGG | 0.414218 | 1.3:+57059367 | MS.gene43984:CDS |
| CAAGTCCAGTTCATGTTCAT+GGG | 0.414994 | 1.3:-57059372 | None:intergenic |
| TCAGAATCAGTCCCCATCTC+AGG | 0.415078 | 1.3:-57059656 | None:intergenic |
| TTCAATTATTGTAAGACAGT+TGG | 0.416326 | 1.3:-57060704 | None:intergenic |
| CCATGTTCTCATCAAATCCT+TGG | 0.424457 | 1.3:-57059610 | None:intergenic |
| TTTGTTCTAATCCCATGTTA+TGG | 0.428651 | 1.3:-57059439 | None:intergenic |
| GCTACTGGATTTGATGGTGA+TGG | 0.434001 | 1.3:+57060412 | MS.gene43984:CDS |
| CTTCGACAACTCTTGACATC+GGG | 0.435896 | 1.3:-57059794 | None:intergenic |
| TTTGTCAGGAATTGGATGTA+TGG | 0.436081 | 1.3:-57061268 | None:intergenic |
| TAATCACAACTTCCAGAGCT+TGG | 0.436422 | 1.3:-57061332 | None:intergenic |
| CTCAGCAGAAGGAACAAGTA+TGG | 0.436850 | 1.3:-57060986 | None:intergenic |
| CATGGTCAAGAAGGTGATAA+TGG | 0.438718 | 1.3:+57059464 | MS.gene43984:CDS |
| TGCTGCCACAGCATGTGCAC+AGG | 0.439356 | 1.3:-57061163 | None:intergenic |
| ACAAACCCGTGAGCATGAAC+TGG | 0.439896 | 1.3:+57059337 | MS.gene43984:CDS |
| CCATGAACATGAACTGGACT+TGG | 0.440436 | 1.3:+57059373 | MS.gene43984:CDS |
| TGGTGTTATTAAATTCCTTT+CGG | 0.443793 | 1.3:-57060654 | None:intergenic |
| AAATGATGGAATGCATTAGA+AGG | 0.451814 | 1.3:+57060911 | MS.gene43984:CDS |
| CATAATCATGATTTAGGCCT+CGG | 0.454500 | 1.3:+57059266 | MS.gene43984:CDS |
| TTGGCTGAGACATAACTAGA+TGG | 0.460126 | 1.3:-57061493 | None:intergenic |
| CCACGCTTGCTTGTATGATA+AGG | 0.461172 | 1.3:-57060128 | None:intergenic |
| AATCACAACTTCCAGAGCTT+GGG | 0.468639 | 1.3:-57061331 | None:intergenic |
| CAATTCCTGACAAATCTCTC+TGG | 0.471357 | 1.3:+57061277 | MS.gene43984:CDS |
| TGCCAATGTTACCCAAGCTC+TGG | 0.473863 | 1.3:+57061320 | MS.gene43984:CDS |
| GCTGCTGTCTTTGTCGTGGT+TGG | 0.475871 | 1.3:+57061124 | MS.gene43984:CDS |
| CGCTGGAAGCAATTATCAGT+TGG | 0.480930 | 1.3:-57060277 | None:intergenic |
| TGGCAGCACTTCTATCCTGC+AGG | 0.483820 | 1.3:+57061178 | MS.gene43984:CDS |
| GTGTACGAGCCTGAATTACA+TGG | 0.485174 | 1.3:-57059727 | None:intergenic |
| GCTTCCGATAATTCAAATGA+TGG | 0.486436 | 1.3:+57060897 | MS.gene43984:CDS |
| TAAACAGATGCAATACTGCC+TGG | 0.486886 | 1.3:-57060247 | None:intergenic |
| CAAAATCACAATTTACCACT+TGG | 0.488302 | 1.3:+57059218 | MS.gene43984:CDS |
| TGTAGTCGTTGCAATCAAAC+AGG | 0.492325 | 1.3:+57061444 | MS.gene43984:CDS |
| CCCACTGTCAGTTCATAAGT+TGG | 0.492435 | 1.3:-57059761 | None:intergenic |
| GATATTGGAAGAGATTCATA+TGG | 0.494200 | 1.3:+57060093 | MS.gene43984:CDS |
| CCGTGAGCATGAACTGGACT+TGG | 0.496041 | 1.3:+57059343 | MS.gene43984:CDS |
| GAGTTGTCGAAGGGCATTGA+GGG | 0.500482 | 1.3:+57059805 | MS.gene43984:CDS |
| TCCTTCCAGAGAGATTTGTC+AGG | 0.502785 | 1.3:-57061282 | None:intergenic |
| ATTCAGCAGCACCCTGAGAT+GGG | 0.505706 | 1.3:+57059644 | MS.gene43984:CDS |
| GTGCCAGTGAAGGGTGTCCT+TGG | 0.508204 | 1.3:+57059897 | MS.gene43984:CDS |
| CACGAGGAGCAATCAATGCT+TGG | 0.510143 | 1.3:+57059242 | MS.gene43984:CDS |
| CTTGCCCTGTGCACATGCTG+TGG | 0.510461 | 1.3:+57061158 | MS.gene43984:CDS |
| GCGCCAAGGACACCCTTCAC+TGG | 0.510978 | 1.3:-57059900 | None:intergenic |
| CAAGTCCAGTTCATGCTCAC+GGG | 0.512013 | 1.3:-57059342 | None:intergenic |
| TTCACTTGTGCACAGTATTG+TGG | 0.516290 | 1.3:-57060214 | None:intergenic |
| CCAAGTCCAGTTCATGCTCA+CGG | 0.517700 | 1.3:-57059343 | None:intergenic |
| ATCAGCAAGCTTCAGTTCAG+TGG | 0.520062 | 1.3:+57060014 | MS.gene43984:CDS |
| GTCCAGGAAGGGGCGACTTG+TGG | 0.520647 | 1.3:-57059538 | None:intergenic |
| GAGAGGCAAGGAGCGAATCA+TGG | 0.522108 | 1.3:+57060150 | MS.gene43984:CDS |
| TCTATGAACATTCTGCCTGC+AGG | 0.522909 | 1.3:-57061193 | None:intergenic |
| TATCTGAAGAGCAAGTATCT+TGG | 0.523357 | 1.3:+57060376 | MS.gene43984:CDS |
| TATGGACGTCCACTGCATAC+TGG | 0.523677 | 1.3:-57060968 | None:intergenic |
| TAGTTGAAGCTTTAAACAGT+TGG | 0.524379 | 1.3:+57060857 | MS.gene43984:CDS |
| ATTGTCCTGATAGTAAAAGT+TGG | 0.525037 | 1.3:-57059950 | None:intergenic |
| TTTGTCCCAATTGATGCTCG+TGG | 0.529311 | 1.3:-57059319 | None:intergenic |
| TCCTGGACAAAACCACGATC+TGG | 0.530442 | 1.3:+57059553 | MS.gene43984:CDS |
| CTCTGGAAGGAATTGTCTGA+GGG | 0.530798 | 1.3:+57061294 | MS.gene43984:CDS |
| CCATGAGCATGTACTGGACT+TGG | 0.531918 | 1.3:+57059403 | MS.gene43984:CDS |
| GAGTTCGTGCAGAAGATCGC+GGG | 0.534821 | 1.3:+57061400 | MS.gene43984:CDS |
| TGCTGAGAGGAGTGTTGCAG+AGG | 0.535120 | 1.3:+57061002 | MS.gene43984:CDS |
| CCAAGTCCAGTACATGCTCA+TGG | 0.535305 | 1.3:-57059403 | None:intergenic |
| ACAGACCCATGAGCATGTAC+TGG | 0.537290 | 1.3:+57059397 | MS.gene43984:CDS |
| CCAAGGATTTGATGAGAACA+TGG | 0.539526 | 1.3:+57059610 | MS.gene43984:CDS |
| AAGAGTTCCACCTCGTCTAT+GGG | 0.539578 | 1.3:+57060786 | MS.gene43984:CDS |
| ATAGTAAAAGTTGGAACACC+TGG | 0.540113 | 1.3:-57059941 | None:intergenic |
| TTCCAGAGCTTGGGTAACAT+TGG | 0.541341 | 1.3:-57061322 | None:intergenic |
| CATGCTGGTCAATCTTCTAT+GGG | 0.541810 | 1.3:+57060675 | MS.gene43984:CDS |
| CTCTGTGGAGCAAAGGCTGA+AGG | 0.542471 | 1.3:+57060045 | MS.gene43984:CDS |
| ATTCATGCAGCAAAGCTCCC+AGG | 0.543420 | 1.3:+57059923 | MS.gene43984:CDS |
| CGAATCATGGCTGCAATGCG+TGG | 0.545468 | 1.3:+57060163 | MS.gene43984:CDS |
| TCAGCCCACGAGCATCAATT+GGG | 0.546324 | 1.3:+57059314 | MS.gene43984:CDS |
| AAGCTTGCTGATGACCAAGA+TGG | 0.548333 | 1.3:-57060003 | None:intergenic |
| GAACAAAACCATGGTCAAGA+AGG | 0.548889 | 1.3:+57059455 | MS.gene43984:CDS |
| TCAGACAAAATAGTAAGCCT+TGG | 0.550059 | 1.3:-57060544 | None:intergenic |
| GATTCAGCAGCACCCTGAGA+TGG | 0.552306 | 1.3:+57059643 | MS.gene43984:CDS |
| GGAATTTAATAACACCATGC+TGG | 0.554140 | 1.3:+57060660 | MS.gene43984:CDS |
| TTTCAGTATTAACCTCAAGC+AGG | 0.554338 | 1.3:-57060516 | None:intergenic |
| TACTGGATTTGATGGTGATG+GGG | 0.555122 | 1.3:+57060414 | MS.gene43984:CDS |
| GGTGCTGCTGAATCACAGCC+AGG | 0.555344 | 1.3:-57059634 | None:intergenic |
| ACTGCTAAGTGTGCCAGTGA+AGG | 0.558564 | 1.3:+57059887 | MS.gene43984:CDS |
| TCCAACTTATGAACTGACAG+TGG | 0.559125 | 1.3:+57059760 | MS.gene43984:CDS |
| GTTGGATATTGGAAGCATCT+GGG | 0.561704 | 1.3:+57060875 | MS.gene43984:CDS |
| CCTAAATCACTCAGACCACC+TGG | 0.562525 | 1.3:+57061360 | MS.gene43984:CDS |
| CAAATTCAGCTTCATTGGCA+CGG | 0.564868 | 1.3:-57061056 | None:intergenic |
| TTCTTTCTTGGTCGTCCAGG+TGG | 0.565659 | 1.3:-57061375 | None:intergenic |
| TCCTGACAAATCTCTCTGGA+AGG | 0.565681 | 1.3:+57061281 | MS.gene43984:CDS |
| TCAGCAAGCTTCAGTTCAGT+GGG | 0.566754 | 1.3:+57060015 | MS.gene43984:CDS |
| CAATTTCATGGTTCTCGCCG+AGG | 0.566898 | 1.3:-57059283 | None:intergenic |
| CAATTTACCACTTGGTCACG+AGG | 0.568467 | 1.3:+57059226 | MS.gene43984:CDS |
| CATGAACATGAACTGGACTT+GGG | 0.568947 | 1.3:+57059374 | MS.gene43984:CDS |
| TACTTGTTCCTTCTGCTGAG+AGG | 0.569410 | 1.3:+57060989 | MS.gene43984:CDS |
| CAAAATCCATGGAAAGCAGT+AGG | 0.570200 | 1.3:-57060607 | None:intergenic |
| TCCACTGCATACTGGTCTCT+CGG | 0.574021 | 1.3:-57060960 | None:intergenic |
| TTGTCCCAATTGATGCTCGT+GGG | 0.575240 | 1.3:-57059318 | None:intergenic |
| CATTATCACCTTCTTGACCA+TGG | 0.577763 | 1.3:-57059463 | None:intergenic |
| TGATAGACAGCAGGGAATTG+TGG | 0.578407 | 1.3:+57060564 | MS.gene43984:CDS |
| GCAACACTCCTCTCAGCAGA+AGG | 0.579061 | 1.3:-57060997 | None:intergenic |
| GAAAAGAAATAAAGAGACGC+TGG | 0.579112 | 1.3:-57060294 | None:intergenic |
| TGAACTTCATAACCTGCTTG+AGG | 0.580446 | 1.3:+57060504 | MS.gene43984:CDS |
| GCTGCCACAGCATGTGCACA+GGG | 0.580817 | 1.3:-57061162 | None:intergenic |
| CAAGTCCAGTACATGCTCAT+GGG | 0.581232 | 1.3:-57059402 | None:intergenic |
| CTGCTAAGTGTGCCAGTGAA+GGG | 0.582351 | 1.3:+57059888 | MS.gene43984:CDS |
| AGCTTGCTGATGACCAAGAT+GGG | 0.584259 | 1.3:-57060002 | None:intergenic |
| TGGCTGAGACATAACTAGAT+GGG | 0.584641 | 1.3:-57061492 | None:intergenic |
| AGTGACGCATACAAAATCCA+TGG | 0.586326 | 1.3:-57060618 | None:intergenic |
| TTGCTAACTCTGTGGAGCAA+AGG | 0.586731 | 1.3:+57060038 | MS.gene43984:CDS |
| ATGCATGTCGACCACTCTTG+GGG | 0.588045 | 1.3:+57060341 | MS.gene43984:CDS |
| TCTCTGGAAGGAATTGTCTG+AGG | 0.589389 | 1.3:+57061293 | MS.gene43984:CDS |
| CAAGCAAGCGTGGAGAGGCA+AGG | 0.590428 | 1.3:+57060138 | MS.gene43984:CDS |
| CGTGAGCATGAACTGGACTT+GGG | 0.590759 | 1.3:+57059344 | MS.gene43984:CDS |
| AAACAGATGCAATACTGCCT+GGG | 0.592798 | 1.3:-57060246 | None:intergenic |
| TTAATACTGAAAACATGCCA+AGG | 0.596295 | 1.3:+57060527 | MS.gene43984:CDS |
| TCGCGGGCGCGTTAAACGAG+TGG | 0.596930 | 1.3:+57061416 | MS.gene43984:CDS |
| TTAGAAGGCAGCTAATGACT+TGG | 0.601707 | 1.3:+57060926 | MS.gene43984:CDS |
| GAACCCTAATTGCAAGCCAA+AGG | 0.604021 | 1.3:+57060069 | MS.gene43984:CDS |
| GGTGGTCTGAGTGATTTAGG+AGG | 0.604963 | 1.3:-57061357 | None:intergenic |
| CCTTCGACAACTCTTGACAT+CGG | 0.605838 | 1.3:-57059795 | None:intergenic |
| CAGAATCAGTCCCCATCTCA+GGG | 0.606252 | 1.3:-57059655 | None:intergenic |
| ACATGAGATTGACCATAACA+TGG | 0.609107 | 1.3:+57059427 | MS.gene43984:CDS |
| AGAATGATGATAATTGGATG+TGG | 0.611375 | 1.3:+57060473 | MS.gene43984:CDS |
| GTGGTCTGAGTGATTTAGGA+GGG | 0.611864 | 1.3:-57061356 | None:intergenic |
| CATGAGAGTCATTCATGTGG+AGG | 0.616936 | 1.3:+57059974 | MS.gene43984:CDS |
| AATCGCTGCTGTCTTTGTCG+TGG | 0.617466 | 1.3:+57061120 | MS.gene43984:CDS |
| CTGGAAGGAATTGTCTGAGG+GGG | 0.617473 | 1.3:+57061296 | MS.gene43984:CDS |
| CCTTATCATACAAGCAAGCG+TGG | 0.617922 | 1.3:+57060128 | MS.gene43984:CDS |
| TCATACAAGCAAGCGTGGAG+AGG | 0.621187 | 1.3:+57060133 | MS.gene43984:CDS |
| TCAACAACACCAAATGCAAG+AGG | 0.621807 | 1.3:-57060445 | None:intergenic |
| TAGTAAAAGTTGGAACACCT+GGG | 0.624439 | 1.3:-57059940 | None:intergenic |
| TTTGACCAAGTATCAAATCG+TGG | 0.624677 | 1.3:-57059199 | None:intergenic |
| CTTGAGTGACAGCTTCCGAA+AGG | 0.627819 | 1.3:+57060639 | MS.gene43984:CDS |
| CGATGTCAAGAGTTGTCGAA+GGG | 0.628274 | 1.3:+57059796 | MS.gene43984:CDS |
| TGTACGAGCCTGAATTACAT+GGG | 0.629814 | 1.3:-57059726 | None:intergenic |
| CCATAGAAGATTGACCAGCA+TGG | 0.636083 | 1.3:-57060674 | None:intergenic |
| TTCAGCAGCACCCTGAGATG+GGG | 0.639215 | 1.3:+57059645 | MS.gene43984:CDS |
| AGTCTGCATCTCAAAGTGCA+AGG | 0.641425 | 1.3:-57059840 | None:intergenic |
| CCGATGTCAAGAGTTGTCGA+AGG | 0.642048 | 1.3:+57059795 | MS.gene43984:CDS |
| TCAGTGGGTTGCTAACTCTG+TGG | 0.642390 | 1.3:+57060030 | MS.gene43984:CDS |
| GAGAACCATGAAATTGAACT+GGG | 0.642468 | 1.3:+57059290 | MS.gene43984:CDS |
| ATTTGATGAGAACATGGACC+TGG | 0.645878 | 1.3:+57059616 | MS.gene43984:CDS |
| CAAGTGAAACGCACAAACCC+AGG | 0.647998 | 1.3:+57060229 | MS.gene43984:CDS |
| GATTGCTCCTCGTGACCAAG+TGG | 0.648290 | 1.3:-57059233 | None:intergenic |
| AGAGTTCGTGCAGAAGATCG+CGG | 0.656349 | 1.3:+57061399 | MS.gene43984:CDS |
| AGACAGCAGGGAATTGTGGA+TGG | 0.660668 | 1.3:+57060568 | MS.gene43984:CDS |
| TTTGCTGCATGAATGCGCCA+AGG | 0.662826 | 1.3:-57059914 | None:intergenic |
| GTTCTATCAAGCCCCAAGAG+TGG | 0.663383 | 1.3:-57060352 | None:intergenic |
| AGAGTTGTCGAAGGGCATTG+AGG | 0.664151 | 1.3:+57059804 | MS.gene43984:CDS |
| ATTCATGAGAGTCATTCATG+TGG | 0.668999 | 1.3:+57059971 | MS.gene43984:CDS |
| CATGAGATTGACCATAACAT+GGG | 0.671897 | 1.3:+57059428 | MS.gene43984:CDS |
| CCAACTTATGAACTGACAGT+GGG | 0.672997 | 1.3:+57059761 | MS.gene43984:CDS |
| TTTGAAGTTATATCTCACGA+AGG | 0.673472 | 1.3:+57061075 | MS.gene43984:CDS |
| TTATGAGCATGAGCTAACCA+TGG | 0.674134 | 1.3:+57059493 | MS.gene43984:CDS |
| GCGGTAGCCCATAGACGAGG+TGG | 0.679600 | 1.3:-57060793 | None:intergenic |
| TGTTCTCTAAGACCAGATCG+TGG | 0.679999 | 1.3:-57059565 | None:intergenic |
| TTCGACAACTCTTGACATCG+GGG | 0.680775 | 1.3:-57059793 | None:intergenic |
| GCCGAGAGACCAGTATGCAG+TGG | 0.680816 | 1.3:+57060959 | MS.gene43984:CDS |
| CCTGTGCCCCTCAAAATAGG+CGG | 0.701679 | 1.3:-57060812 | None:intergenic |
| TCTGGAAGGAATTGTCTGAG+GGG | 0.716462 | 1.3:+57061295 | MS.gene43984:CDS |
| ATGGGATTAGAACAAAACCA+TGG | 0.719044 | 1.3:+57059446 | MS.gene43984:CDS |
| TAGGCGGTAGCCCATAGACG+AGG | 0.721149 | 1.3:-57060796 | None:intergenic |
| GTACGAGCCTGAATTACATG+GGG | 0.725957 | 1.3:-57059725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTACAATAATTGAATTTGA+AGG | + | chr1.3:57060712-57060731 | MS.gene43984:CDS | 20.0% |
| ! | CATTCCATCATTTGAATTAT+CGG | - | chr1.3:57060904-57060923 | None:intergenic | 25.0% |
| ! | GAACTAATATAGTCGATATA+AGG | + | chr1.3:57061097-57061116 | MS.gene43984:CDS | 25.0% |
| ! | TGAATTTGAAGGTAAAGTTA+TGG | + | chr1.3:57060723-57060742 | MS.gene43984:CDS | 25.0% |
| ! | TTCAATTATTGTAAGACAGT+TGG | - | chr1.3:57060707-57060726 | None:intergenic | 25.0% |
| !!! | TCTTTTCAAGCATCTATATA+TGG | + | chr1.3:57060310-57060329 | MS.gene43984:CDS | 25.0% |
| !!! | TGGTGTTATTAAATTCCTTT+CGG | - | chr1.3:57060657-57060676 | None:intergenic | 25.0% |
| AACTTCAAATTCAGCTTCAT+TGG | - | chr1.3:57061064-57061083 | None:intergenic | 30.0% | |
| ACGAAGAGAATGATGATAAT+TGG | + | chr1.3:57060467-57060486 | MS.gene43984:CDS | 30.0% | |
| AGAATGATGATAATTGGATG+TGG | + | chr1.3:57060473-57060492 | MS.gene43984:CDS | 30.0% | |
| ATTGTCCTGATAGTAAAAGT+TGG | - | chr1.3:57059953-57059972 | None:intergenic | 30.0% | |
| CAAAATCACAATTTACCACT+TGG | + | chr1.3:57059218-57059237 | MS.gene43984:CDS | 30.0% | |
| CTTGGTCATAATCATGATTT+AGG | + | chr1.3:57059260-57059279 | MS.gene43984:CDS | 30.0% | |
| GATATTGGAAGAGATTCATA+TGG | + | chr1.3:57060093-57060112 | MS.gene43984:CDS | 30.0% | |
| TAACCATGGAACAAAAATCT+GGG | + | chr1.3:57059507-57059526 | MS.gene43984:CDS | 30.0% | |
| TTAATACTGAAAACATGCCA+AGG | + | chr1.3:57060527-57060546 | MS.gene43984:CDS | 30.0% | |
| TTTGTTCTAATCCCATGTTA+TGG | - | chr1.3:57059442-57059461 | None:intergenic | 30.0% | |
| ! | AAATGATGGAATGCATTAGA+AGG | + | chr1.3:57060911-57060930 | MS.gene43984:CDS | 30.0% |
| ! | TTTGAAGTTATATCTCACGA+AGG | + | chr1.3:57061075-57061094 | MS.gene43984:CDS | 30.0% |
| !! | AGCTTTAAACAGTTGGATAT+TGG | + | chr1.3:57060864-57060883 | MS.gene43984:CDS | 30.0% |
| !! | TAGTTGAAGCTTTAAACAGT+TGG | + | chr1.3:57060857-57060876 | MS.gene43984:CDS | 30.0% |
| !!! | CTAACTGTTTTTGAAAACCA+AGG | + | chr1.3:57059593-57059612 | MS.gene43984:CDS | 30.0% |
| ACATGAGATTGACCATAACA+TGG | + | chr1.3:57059427-57059446 | MS.gene43984:CDS | 35.0% | |
| ATAGTAAAAGTTGGAACACC+TGG | - | chr1.3:57059944-57059963 | None:intergenic | 35.0% | |
| ATCTCTTCCAATATCTCCTT+TGG | - | chr1.3:57060088-57060107 | None:intergenic | 35.0% | |
| ATGGGATTAGAACAAAACCA+TGG | + | chr1.3:57059446-57059465 | MS.gene43984:CDS | 35.0% | |
| ATTCATGAGAGTCATTCATG+TGG | + | chr1.3:57059971-57059990 | MS.gene43984:CDS | 35.0% | |
| CATAATCATGATTTAGGCCT+CGG | + | chr1.3:57059266-57059285 | MS.gene43984:CDS | 35.0% | |
| CATGAGATTGACCATAACAT+GGG | + | chr1.3:57059428-57059447 | MS.gene43984:CDS | 35.0% | |
| CTAACCATGGAACAAAAATC+TGG | + | chr1.3:57059506-57059525 | MS.gene43984:CDS | 35.0% | |
| GAAAAGAAATAAAGAGACGC+TGG | - | chr1.3:57060297-57060316 | None:intergenic | 35.0% | |
| GAAGAGATTCATATGGTTCA+TGG | + | chr1.3:57060100-57060119 | MS.gene43984:CDS | 35.0% | |
| GAGAACCATGAAATTGAACT+GGG | + | chr1.3:57059290-57059309 | MS.gene43984:CDS | 35.0% | |
| GCTTCCGATAATTCAAATGA+TGG | + | chr1.3:57060897-57060916 | MS.gene43984:CDS | 35.0% | |
| GGAATTTAATAACACCATGC+TGG | + | chr1.3:57060660-57060679 | MS.gene43984:CDS | 35.0% | |
| TAGTAAAAGTTGGAACACCT+GGG | - | chr1.3:57059943-57059962 | None:intergenic | 35.0% | |
| TATCACAAGATGCTGCATAT+TGG | + | chr1.3:57060758-57060777 | MS.gene43984:CDS | 35.0% | |
| TATCTGAAGAGCAAGTATCT+TGG | + | chr1.3:57060376-57060395 | MS.gene43984:CDS | 35.0% | |
| TCAGACAAAATAGTAAGCCT+TGG | - | chr1.3:57060547-57060566 | None:intergenic | 35.0% | |
| TTTCAGTATTAACCTCAAGC+AGG | - | chr1.3:57060519-57060538 | None:intergenic | 35.0% | |
| TTTGACCAAGTATCAAATCG+TGG | - | chr1.3:57059202-57059221 | None:intergenic | 35.0% | |
| TTTGTCAGGAATTGGATGTA+TGG | - | chr1.3:57061271-57061290 | None:intergenic | 35.0% | |
| ! | AATTTTCCTACTGCTTTCCA+TGG | + | chr1.3:57060601-57060620 | MS.gene43984:CDS | 35.0% |
| ! | ATTTTGTCTGATAGACAGCA+GGG | + | chr1.3:57060556-57060575 | MS.gene43984:CDS | 35.0% |
| ! | CTTTTTGCTACTGGATTTGA+TGG | + | chr1.3:57060406-57060425 | MS.gene43984:CDS | 35.0% |
| ! | GTGTTCCAACTTTTACTATC+AGG | + | chr1.3:57059945-57059964 | MS.gene43984:CDS | 35.0% |
| ! | TATTTTGTCTGATAGACAGC+AGG | + | chr1.3:57060555-57060574 | MS.gene43984:CDS | 35.0% |
| !!! | GGTACATTACTTTTTGCTAC+TGG | + | chr1.3:57060397-57060416 | MS.gene43984:CDS | 35.0% |
| AAACAGATGCAATACTGCCT+GGG | - | chr1.3:57060249-57060268 | None:intergenic | 40.0% | |
| AATCACAACTTCCAGAGCTT+GGG | - | chr1.3:57061334-57061353 | None:intergenic | 40.0% | |
| ACAAACCCATGAACATGAAC+TGG | + | chr1.3:57059367-57059386 | MS.gene43984:CDS | 40.0% | |
| AGTGACGCATACAAAATCCA+TGG | - | chr1.3:57060621-57060640 | None:intergenic | 40.0% | |
| ATTTGATGAGAACATGGACC+TGG | + | chr1.3:57059616-57059635 | MS.gene43984:CDS | 40.0% | |
| CAAAATCCATGGAAAGCAGT+AGG | - | chr1.3:57060610-57060629 | None:intergenic | 40.0% | |
| CAAATTCAGCTTCATTGGCA+CGG | - | chr1.3:57061059-57061078 | None:intergenic | 40.0% | |
| CAAGTCCAGTTCATGTTCAT+GGG | - | chr1.3:57059375-57059394 | None:intergenic | 40.0% | |
| CAATTCCTGACAAATCTCTC+TGG | + | chr1.3:57061277-57061296 | MS.gene43984:CDS | 40.0% | |
| CAGAGAGATTTGTCAGGAAT+TGG | - | chr1.3:57061279-57061298 | None:intergenic | 40.0% | |
| CATGAACATGAACTGGACTT+GGG | + | chr1.3:57059374-57059393 | MS.gene43984:CDS | 40.0% | |
| CATGCTGGTCAATCTTCTAT+GGG | + | chr1.3:57060675-57060694 | MS.gene43984:CDS | 40.0% | |
| CATGGTCAAGAAGGTGATAA+TGG | + | chr1.3:57059464-57059483 | MS.gene43984:CDS | 40.0% | |
| CATTATCACCTTCTTGACCA+TGG | - | chr1.3:57059466-57059485 | None:intergenic | 40.0% | |
| CCAACTTATGAACTGACAGT+GGG | + | chr1.3:57059761-57059780 | MS.gene43984:CDS | 40.0% | |
| CCAAGGATTTGATGAGAACA+TGG | + | chr1.3:57059610-57059629 | MS.gene43984:CDS | 40.0% | |
| CCATGTTCTCATCAAATCCT+TGG | - | chr1.3:57059613-57059632 | None:intergenic | 40.0% | |
| CGAGAACCATGAAATTGAAC+TGG | + | chr1.3:57059289-57059308 | MS.gene43984:CDS | 40.0% | |
| CTGATCCCAGTTCAATTTCA+TGG | - | chr1.3:57059298-57059317 | None:intergenic | 40.0% | |
| GAACAAAACCATGGTCAAGA+AGG | + | chr1.3:57059455-57059474 | MS.gene43984:CDS | 40.0% | |
| GCTAACCACGATTTGATACT+TGG | + | chr1.3:57059194-57059213 | MS.gene43984:CDS | 40.0% | |
| GGCAGTATTGCATCTGTTTA+TGG | + | chr1.3:57060250-57060269 | MS.gene43984:CDS | 40.0% | |
| TAAACAGATGCAATACTGCC+TGG | - | chr1.3:57060250-57060269 | None:intergenic | 40.0% | |
| TAATCACAACTTCCAGAGCT+TGG | - | chr1.3:57061335-57061354 | None:intergenic | 40.0% | |
| TCAACAACACCAAATGCAAG+AGG | - | chr1.3:57060448-57060467 | None:intergenic | 40.0% | |
| TCCAACTTATGAACTGACAG+TGG | + | chr1.3:57059760-57059779 | MS.gene43984:CDS | 40.0% | |
| TGAACTTCATAACCTGCTTG+AGG | + | chr1.3:57060504-57060523 | MS.gene43984:CDS | 40.0% | |
| TGTACGAGCCTGAATTACAT+GGG | - | chr1.3:57059729-57059748 | None:intergenic | 40.0% | |
| TGTAGTCGTTGCAATCAAAC+AGG | + | chr1.3:57061444-57061463 | MS.gene43984:CDS | 40.0% | |
| TTAGAAGGCAGCTAATGACT+TGG | + | chr1.3:57060926-57060945 | MS.gene43984:CDS | 40.0% | |
| TTATGAGCATGAGCTAACCA+TGG | + | chr1.3:57059493-57059512 | MS.gene43984:CDS | 40.0% | |
| TTCACTTGTGCACAGTATTG+TGG | - | chr1.3:57060217-57060236 | None:intergenic | 40.0% | |
| TTCTGAACCCCATGTAATTC+AGG | + | chr1.3:57059718-57059737 | MS.gene43984:CDS | 40.0% | |
| TTGCAAGCCAAAGGAGATAT+TGG | + | chr1.3:57060078-57060097 | MS.gene43984:CDS | 40.0% | |
| ! | ATGCCCAGATTTTTGTTCCA+TGG | - | chr1.3:57059513-57059532 | None:intergenic | 40.0% |
| !! | AGTTGGATATTGGAAGCATC+TGG | + | chr1.3:57060874-57060893 | MS.gene43984:CDS | 40.0% |
| !! | ATCTCCTTTGGCTTGCAATT+AGG | - | chr1.3:57060076-57060095 | None:intergenic | 40.0% |
| !! | ATGCGTGGATCTTTTGAAGA+AGG | + | chr1.3:57060178-57060197 | MS.gene43984:CDS | 40.0% |
| !! | CTACTGGATTTGATGGTGAT+GGG | + | chr1.3:57060413-57060432 | MS.gene43984:CDS | 40.0% |
| !! | GTTGGATATTGGAAGCATCT+GGG | + | chr1.3:57060875-57060894 | MS.gene43984:CDS | 40.0% |
| !! | TACTGGATTTGATGGTGATG+GGG | + | chr1.3:57060414-57060433 | MS.gene43984:CDS | 40.0% |
| !! | TCTCCTTTGGCTTGCAATTA+GGG | - | chr1.3:57060075-57060094 | None:intergenic | 40.0% |
| !! | TGCGTGGATCTTTTGAAGAA+GGG | + | chr1.3:57060179-57060198 | MS.gene43984:CDS | 40.0% |
| AAACCTGTGCCCCTCAAAAT+AGG | - | chr1.3:57060818-57060837 | None:intergenic | 45.0% | |
| AAATGCATGTCGACCACTCT+TGG | + | chr1.3:57060339-57060358 | MS.gene43984:CDS | 45.0% | |
| AAGAGTTCCACCTCGTCTAT+GGG | + | chr1.3:57060786-57060805 | MS.gene43984:CDS | 45.0% | |
| AATGCATGTCGACCACTCTT+GGG | + | chr1.3:57060340-57060359 | MS.gene43984:CDS | 45.0% | |
| AGTCTGCATCTCAAAGTGCA+AGG | - | chr1.3:57059843-57059862 | None:intergenic | 45.0% | |
| ATCAGCAAGCTTCAGTTCAG+TGG | + | chr1.3:57060014-57060033 | MS.gene43984:CDS | 45.0% | |
| CAAGTCCAGTACATGCTCAT+GGG | - | chr1.3:57059405-57059424 | None:intergenic | 45.0% | |
| CAATTTACCACTTGGTCACG+AGG | + | chr1.3:57059226-57059245 | MS.gene43984:CDS | 45.0% | |
| CATGAGAGTCATTCATGTGG+AGG | + | chr1.3:57059974-57059993 | MS.gene43984:CDS | 45.0% | |
| CCAAGTCCAGTTCATGTTCA+TGG | - | chr1.3:57059376-57059395 | None:intergenic | 45.0% | |
| CCACGCTTGCTTGTATGATA+AGG | - | chr1.3:57060131-57060150 | None:intergenic | 45.0% | |
| CCATAGAAGATTGACCAGCA+TGG | - | chr1.3:57060677-57060696 | None:intergenic | 45.0% | |
| CCATGAACATGAACTGGACT+TGG | + | chr1.3:57059373-57059392 | MS.gene43984:CDS | 45.0% | |
| CCATGCTGGTCAATCTTCTA+TGG | + | chr1.3:57060674-57060693 | MS.gene43984:CDS | 45.0% | |
| CCCACTGTCAGTTCATAAGT+TGG | - | chr1.3:57059764-57059783 | None:intergenic | 45.0% | |
| CCTTATCATACAAGCAAGCG+TGG | + | chr1.3:57060128-57060147 | MS.gene43984:CDS | 45.0% | |
| CCTTCGACAACTCTTGACAT+CGG | - | chr1.3:57059798-57059817 | None:intergenic | 45.0% | |
| CGATGTCAAGAGTTGTCGAA+GGG | + | chr1.3:57059796-57059815 | MS.gene43984:CDS | 45.0% | |
| CGCTGGAAGCAATTATCAGT+TGG | - | chr1.3:57060280-57060299 | None:intergenic | 45.0% | |
| CTCAGCAGAAGGAACAAGTA+TGG | - | chr1.3:57060989-57061008 | None:intergenic | 45.0% | |
| CTTCGACAACTCTTGACATC+GGG | - | chr1.3:57059797-57059816 | None:intergenic | 45.0% | |
| GAACCCTAATTGCAAGCCAA+AGG | + | chr1.3:57060069-57060088 | MS.gene43984:CDS | 45.0% | |
| GCACGAACTCTCTTCTTTCT+TGG | - | chr1.3:57061390-57061409 | None:intergenic | 45.0% | |
| GCTCTCTTTCCTCTTGCATT+TGG | + | chr1.3:57060436-57060455 | MS.gene43984:CDS | 45.0% | |
| GTACGAGCCTGAATTACATG+GGG | - | chr1.3:57059728-57059747 | None:intergenic | 45.0% | |
| GTGGTCTGAGTGATTTAGGA+GGG | - | chr1.3:57061359-57061378 | None:intergenic | 45.0% | |
| GTGTACGAGCCTGAATTACA+TGG | - | chr1.3:57059730-57059749 | None:intergenic | 45.0% | |
| TACTTGTTCCTTCTGCTGAG+AGG | + | chr1.3:57060989-57061008 | MS.gene43984:CDS | 45.0% | |
| TCAGCAAGCTTCAGTTCAGT+GGG | + | chr1.3:57060015-57060034 | MS.gene43984:CDS | 45.0% | |
| TCCTGACAAATCTCTCTGGA+AGG | + | chr1.3:57061281-57061300 | MS.gene43984:CDS | 45.0% | |
| TCCTTCCAGAGAGATTTGTC+AGG | - | chr1.3:57061285-57061304 | None:intergenic | 45.0% | |
| TCTATGAACATTCTGCCTGC+AGG | - | chr1.3:57061196-57061215 | None:intergenic | 45.0% | |
| TCTGGAAGGAATTGTCTGAG+GGG | + | chr1.3:57061295-57061314 | MS.gene43984:CDS | 45.0% | |
| TCTTGACATCGGGGAATTCT+TGG | - | chr1.3:57059787-57059806 | None:intergenic | 45.0% | |
| TGATAGACAGCAGGGAATTG+TGG | + | chr1.3:57060564-57060583 | MS.gene43984:CDS | 45.0% | |
| TGTGGAGGAATTTCCCATCT+TGG | + | chr1.3:57059989-57060008 | MS.gene43984:CDS | 45.0% | |
| TTCCAGAGCTTGGGTAACAT+TGG | - | chr1.3:57061325-57061344 | None:intergenic | 45.0% | |
| TTCGACAACTCTTGACATCG+GGG | - | chr1.3:57059796-57059815 | None:intergenic | 45.0% | |
| TTGCTAACTCTGTGGAGCAA+AGG | + | chr1.3:57060038-57060057 | MS.gene43984:CDS | 45.0% | |
| TTGTCCCAATTGATGCTCGT+GGG | - | chr1.3:57059321-57059340 | None:intergenic | 45.0% | |
| TTTGTCCCAATTGATGCTCG+TGG | - | chr1.3:57059322-57059341 | None:intergenic | 45.0% | |
| ! | CTCTGGAAGGAATTGTCTGA+GGG | + | chr1.3:57061294-57061313 | MS.gene43984:CDS | 45.0% |
| ! | TCTCTGGAAGGAATTGTCTG+AGG | + | chr1.3:57061293-57061312 | MS.gene43984:CDS | 45.0% |
| !! | AAGCTTGCTGATGACCAAGA+TGG | - | chr1.3:57060006-57060025 | None:intergenic | 45.0% |
| !! | AGCTTGCTGATGACCAAGAT+GGG | - | chr1.3:57060005-57060024 | None:intergenic | 45.0% |
| !! | GCTACTGGATTTGATGGTGA+TGG | + | chr1.3:57060412-57060431 | MS.gene43984:CDS | 45.0% |
| !! | TATTTTGAGGGGCACAGGTT+TGG | + | chr1.3:57060817-57060836 | MS.gene43984:CDS | 45.0% |
| !! | TGTTCTCTAAGACCAGATCG+TGG | - | chr1.3:57059568-57059587 | None:intergenic | 45.0% |
| !!! | ATCGTGGTTTTGTCCAGGAA+GGG | - | chr1.3:57059552-57059571 | None:intergenic | 45.0% |
| AATCGCTGCTGTCTTTGTCG+TGG | + | chr1.3:57061120-57061139 | MS.gene43984:CDS | 50.0% | |
| ACAAACCCGTGAGCATGAAC+TGG | + | chr1.3:57059337-57059356 | MS.gene43984:CDS | 50.0% | |
| ACAGACCCATGAGCATGTAC+TGG | + | chr1.3:57059397-57059416 | MS.gene43984:CDS | 50.0% | |
| ACTGCTAAGTGTGCCAGTGA+AGG | + | chr1.3:57059887-57059906 | MS.gene43984:CDS | 50.0% | |
| AGAACGTGCACGCACTTATC+AGG | + | chr1.3:57061029-57061048 | MS.gene43984:CDS | 50.0% | |
| AGACAGCAGGGAATTGTGGA+TGG | + | chr1.3:57060568-57060587 | MS.gene43984:CDS | 50.0% | |
| AGAGTTCGTGCAGAAGATCG+CGG | + | chr1.3:57061399-57061418 | MS.gene43984:CDS | 50.0% | |
| ATCAGCCCACGAGCATCAAT+TGG | + | chr1.3:57059313-57059332 | MS.gene43984:CDS | 50.0% | |
| ATGCATGTCGACCACTCTTG+GGG | + | chr1.3:57060341-57060360 | MS.gene43984:CDS | 50.0% | |
| ATTCAGCAGCACCCTGAGAT+GGG | + | chr1.3:57059644-57059663 | MS.gene43984:CDS | 50.0% | |
| ATTCATGCAGCAAAGCTCCC+AGG | + | chr1.3:57059923-57059942 | MS.gene43984:CDS | 50.0% | |
| CAAGTCCAGTTCATGCTCAC+GGG | - | chr1.3:57059345-57059364 | None:intergenic | 50.0% | |
| CAAGTGAAACGCACAAACCC+AGG | + | chr1.3:57060229-57060248 | MS.gene43984:CDS | 50.0% | |
| CAATTTCATGGTTCTCGCCG+AGG | - | chr1.3:57059286-57059305 | None:intergenic | 50.0% | |
| CACGAGGAGCAATCAATGCT+TGG | + | chr1.3:57059242-57059261 | MS.gene43984:CDS | 50.0% | |
| CAGAATCAGTCCCCATCTCA+GGG | - | chr1.3:57059658-57059677 | None:intergenic | 50.0% | |
| CCAAGTCCAGTACATGCTCA+TGG | - | chr1.3:57059406-57059425 | None:intergenic | 50.0% | |
| CCAAGTCCAGTTCATGCTCA+CGG | - | chr1.3:57059346-57059365 | None:intergenic | 50.0% | |
| CCAGGTGGTCTGAGTGATTT+AGG | - | chr1.3:57061363-57061382 | None:intergenic | 50.0% | |
| CCATGAGCATGTACTGGACT+TGG | + | chr1.3:57059403-57059422 | MS.gene43984:CDS | 50.0% | |
| CCGATGTCAAGAGTTGTCGA+AGG | + | chr1.3:57059795-57059814 | MS.gene43984:CDS | 50.0% | |
| CCTAAATCACTCAGACCACC+TGG | + | chr1.3:57061360-57061379 | MS.gene43984:CDS | 50.0% | |
| CGTGAGCATGAACTGGACTT+GGG | + | chr1.3:57059344-57059363 | MS.gene43984:CDS | 50.0% | |
| CTCTTCTTTCTTGGTCGTCC+AGG | - | chr1.3:57061381-57061400 | None:intergenic | 50.0% | |
| CTGCTAAGTGTGCCAGTGAA+GGG | + | chr1.3:57059888-57059907 | MS.gene43984:CDS | 50.0% | |
| CTGGAAGGAATTGTCTGAGG+GGG | + | chr1.3:57061296-57061315 | MS.gene43984:CDS | 50.0% | |
| CTTGAGTGACAGCTTCCGAA+AGG | + | chr1.3:57060639-57060658 | MS.gene43984:CDS | 50.0% | |
| GAAGAGTTCCACCTCGTCTA+TGG | + | chr1.3:57060785-57060804 | MS.gene43984:CDS | 50.0% | |
| GGTGGTCTGAGTGATTTAGG+AGG | - | chr1.3:57061360-57061379 | None:intergenic | 50.0% | |
| GTTCTATCAAGCCCCAAGAG+TGG | - | chr1.3:57060355-57060374 | None:intergenic | 50.0% | |
| TATGGACGTCCACTGCATAC+TGG | - | chr1.3:57060971-57060990 | None:intergenic | 50.0% | |
| TCAGAATCAGTCCCCATCTC+AGG | - | chr1.3:57059659-57059678 | None:intergenic | 50.0% | |
| TCAGCCCACGAGCATCAATT+GGG | + | chr1.3:57059314-57059333 | MS.gene43984:CDS | 50.0% | |
| TCATACAAGCAAGCGTGGAG+AGG | + | chr1.3:57060133-57060152 | MS.gene43984:CDS | 50.0% | |
| TCCTGGACAAAACCACGATC+TGG | + | chr1.3:57059553-57059572 | MS.gene43984:CDS | 50.0% | |
| TGCCAATGTTACCCAAGCTC+TGG | + | chr1.3:57061320-57061339 | MS.gene43984:CDS | 50.0% | |
| TGTCGTGGTTGGCAGCTTTA+TGG | + | chr1.3:57061135-57061154 | MS.gene43984:CDS | 50.0% | |
| TTCTTTCTTGGTCGTCCAGG+TGG | - | chr1.3:57061378-57061397 | None:intergenic | 50.0% | |
| TTTGCTGCATGAATGCGCCA+AGG | - | chr1.3:57059917-57059936 | None:intergenic | 50.0% | |
| ! | TCCACTGCATACTGGTCTCT+CGG | - | chr1.3:57060963-57060982 | None:intergenic | 50.0% |
| !! | AGAGTTGTCGAAGGGCATTG+AGG | + | chr1.3:57059804-57059823 | MS.gene43984:CDS | 50.0% |
| !! | ATGGGCTACCGCCTATTTTG+AGG | + | chr1.3:57060804-57060823 | MS.gene43984:CDS | 50.0% |
| !! | GAGTTGTCGAAGGGCATTGA+GGG | + | chr1.3:57059805-57059824 | MS.gene43984:CDS | 50.0% |
| !! | TCAGTGGGTTGCTAACTCTG+TGG | + | chr1.3:57060030-57060049 | MS.gene43984:CDS | 50.0% |
| !! | TGGGCTACCGCCTATTTTGA+GGG | + | chr1.3:57060805-57060824 | MS.gene43984:CDS | 50.0% |
| !!! | ACCAGATCGTGGTTTTGTCC+AGG | - | chr1.3:57059557-57059576 | None:intergenic | 50.0% |
| !!! | GATCGTGGTTTTGTCCAGGA+AGG | - | chr1.3:57059553-57059572 | None:intergenic | 50.0% |
| !!! | TCGTGGTTTTGTCCAGGAAG+GGG | - | chr1.3:57059551-57059570 | None:intergenic | 50.0% |
| CCGTGAGCATGAACTGGACT+TGG | + | chr1.3:57059343-57059362 | MS.gene43984:CDS | 55.0% | |
| CCTGTGCCCCTCAAAATAGG+CGG | - | chr1.3:57060815-57060834 | None:intergenic | 55.0% | |
| CGAATCATGGCTGCAATGCG+TGG | + | chr1.3:57060163-57060182 | MS.gene43984:CDS | 55.0% | |
| CTCTGTGGAGCAAAGGCTGA+AGG | + | chr1.3:57060045-57060064 | MS.gene43984:CDS | 55.0% | |
| GAGAGGCAAGGAGCGAATCA+TGG | + | chr1.3:57060150-57060169 | MS.gene43984:CDS | 55.0% | |
| GAGTTCGTGCAGAAGATCGC+GGG | + | chr1.3:57061400-57061419 | MS.gene43984:CDS | 55.0% | |
| GATTCAGCAGCACCCTGAGA+TGG | + | chr1.3:57059643-57059662 | MS.gene43984:CDS | 55.0% | |
| GATTGCTCCTCGTGACCAAG+TGG | - | chr1.3:57059236-57059255 | None:intergenic | 55.0% | |
| GCAACACTCCTCTCAGCAGA+AGG | - | chr1.3:57061000-57061019 | None:intergenic | 55.0% | |
| GCTGCTGTCTTTGTCGTGGT+TGG | + | chr1.3:57061124-57061143 | MS.gene43984:CDS | 55.0% | |
| TGGCAGCACTTCTATCCTGC+AGG | + | chr1.3:57061178-57061197 | MS.gene43984:CDS | 55.0% | |
| TTCAGCAGCACCCTGAGATG+GGG | + | chr1.3:57059645-57059664 | MS.gene43984:CDS | 55.0% | |
| !! | GGGCTACCGCCTATTTTGAG+GGG | + | chr1.3:57060806-57060825 | MS.gene43984:CDS | 55.0% |
| !! | TGCTGAGAGGAGTGTTGCAG+AGG | + | chr1.3:57061002-57061021 | MS.gene43984:CDS | 55.0% |
| CAAGCAAGCGTGGAGAGGCA+AGG | + | chr1.3:57060138-57060157 | MS.gene43984:CDS | 60.0% | |
| CTTGCCCTGTGCACATGCTG+TGG | + | chr1.3:57061158-57061177 | MS.gene43984:CDS | 60.0% | |
| GCCGAGAGACCAGTATGCAG+TGG | + | chr1.3:57060959-57060978 | MS.gene43984:CDS | 60.0% | |
| GCTGCCACAGCATGTGCACA+GGG | - | chr1.3:57061165-57061184 | None:intergenic | 60.0% | |
| TAGGCGGTAGCCCATAGACG+AGG | - | chr1.3:57060799-57060818 | None:intergenic | 60.0% | |
| TGCTGCCACAGCATGTGCAC+AGG | - | chr1.3:57061166-57061185 | None:intergenic | 60.0% | |
| !! | CCGCCTATTTTGAGGGGCAC+AGG | + | chr1.3:57060812-57060831 | MS.gene43984:CDS | 60.0% |
| !! | GGTGCTGCTGAATCACAGCC+AGG | - | chr1.3:57059637-57059656 | None:intergenic | 60.0% |
| !! | GTGCCAGTGAAGGGTGTCCT+TGG | + | chr1.3:57059897-57059916 | MS.gene43984:CDS | 60.0% |
| GACCACAAGTCGCCCCTTCC+TGG | + | chr1.3:57059536-57059555 | MS.gene43984:CDS | 65.0% | |
| GCGCCAAGGACACCCTTCAC+TGG | - | chr1.3:57059903-57059922 | None:intergenic | 65.0% | |
| GCGGTAGCCCATAGACGAGG+TGG | - | chr1.3:57060796-57060815 | None:intergenic | 65.0% | |
| GTCCAGGAAGGGGCGACTTG+TGG | - | chr1.3:57059541-57059560 | None:intergenic | 65.0% | |
| TCGCGGGCGCGTTAAACGAG+TGG | + | chr1.3:57061416-57061435 | MS.gene43984:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57059191 | 57061500 | 57059191 | ID=MS.gene43984 |
| chr1.3 | mRNA | 57059191 | 57061500 | 57059191 | ID=MS.gene43984.t1;Parent=MS.gene43984 |
| chr1.3 | exon | 57059191 | 57061500 | 57059191 | ID=MS.gene43984.t1.exon1;Parent=MS.gene43984.t1 |
| chr1.3 | CDS | 57059191 | 57061500 | 57059191 | ID=cds.MS.gene43984.t1;Parent=MS.gene43984.t1 |
| Gene Sequence |
| Protein sequence |
