Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44186.t1 | XP_003613302.2 | 97.3 | 186 | 5 | 0 | 1 | 186 | 132 | 317 | 4.50E-97 | 364.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44186.t1 | P29531 | 38.7 | 106 | 63 | 2 | 222 | 327 | 39 | 142 | 4.1e-06 | 53.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44186.t1 | G7K2T4 | 97.3 | 186 | 5 | 0 | 1 | 186 | 101 | 286 | 3.2e-97 | 364.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene44186.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050165 | MS.gene44186 | 0.817448 | 3.28E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene44186 | 0.817194 | 3.74E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44186.t1 | MTR_5g035060 | 97.312 | 186 | 5 | 0 | 1 | 186 | 101 | 286 | 2.36e-133 | 382 |
| MS.gene44186.t1 | MTR_5g035040 | 70.430 | 186 | 26 | 3 | 1 | 186 | 207 | 363 | 8.43e-82 | 253 |
| MS.gene44186.t1 | MTR_5g035050 | 94.667 | 75 | 4 | 0 | 112 | 186 | 29 | 103 | 4.03e-44 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44186.t1 | AT1G24040 | 61.421 | 197 | 67 | 3 | 1 | 189 | 114 | 309 | 1.92e-81 | 251 |
| MS.gene44186.t1 | AT1G24040 | 61.421 | 197 | 67 | 3 | 1 | 189 | 114 | 309 | 1.92e-81 | 251 |
| MS.gene44186.t1 | AT1G24040 | 61.421 | 197 | 67 | 3 | 1 | 189 | 114 | 309 | 1.92e-81 | 251 |
Find 77 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTGGACTCTCCCTTCT+TGG | 0.212085 | 5.2:+25461707 | MS.gene44186:CDS |
| CCTGTAGAGGCCCTTGATCC+TGG | 0.232255 | 5.2:-25461898 | None:intergenic |
| TATAGAGGCAGTGGTGTTAA+TGG | 0.295778 | 5.2:+25456495 | MS.gene44186:CDS |
| GTGTACTGCTTGCACTTTGC+TGG | 0.308239 | 5.2:+25461692 | MS.gene44186:CDS |
| TGCGTCTCTGCAACATCAGC+AGG | 0.318437 | 5.2:-25461157 | None:intergenic |
| CAAATATAAGGCTTATCTTT+CGG | 0.336668 | 5.2:-25456612 | None:intergenic |
| TTTCCCTTCAGGAGGGGAAT+TGG | 0.338461 | 5.2:+25460980 | MS.gene44186:intron |
| ACAGCCATGTTACAAATATA+AGG | 0.346669 | 5.2:-25456624 | None:intergenic |
| GGCTTATCTTTCGGCGGATC+CGG | 0.353217 | 5.2:-25456603 | None:intergenic |
| GTTTCCGAAAGGGTATATTA+AGG | 0.368887 | 5.2:+25456395 | MS.gene44186:CDS |
| CTTGGAACACTCCACTGGAC+TGG | 0.381646 | 5.2:+25461725 | MS.gene44186:CDS |
| TGGCACTGTCCTTGTTCTCA+TGG | 0.386698 | 5.2:+25461858 | MS.gene44186:CDS |
| GTGGAGTGGGTGGTCGGGAG+TGG | 0.400716 | 5.2:+25461949 | MS.gene44186:CDS |
| ATGGTGGCTGGAACAAGAAC+AGG | 0.405324 | 5.2:-25461780 | None:intergenic |
| TCGAGTTGGAAAACAGCTTA+TGG | 0.405829 | 5.2:+25461927 | MS.gene44186:CDS |
| TTGGAACACTCCACTGGACT+GGG | 0.412123 | 5.2:+25461726 | MS.gene44186:CDS |
| CTGTAGAGGCCCTTGATCCT+GGG | 0.419299 | 5.2:-25461897 | None:intergenic |
| AACACCTTAATATACCCTTT+CGG | 0.432789 | 5.2:-25456399 | None:intergenic |
| TCTCCCTTCAGGAGGGGCAT+TGG | 0.444220 | 5.2:+25459352 | MS.gene44186:intron |
| CCCTTCTTGGAACACTCCAC+TGG | 0.452213 | 5.2:+25461720 | MS.gene44186:CDS |
| GAAGAGGAAATGCAGTTGGC+TGG | 0.454362 | 5.2:+25456528 | MS.gene44186:CDS |
| TAATTCTACTCTTCCGTCGC+CGG | 0.460000 | 5.2:+25456584 | MS.gene44186:CDS |
| GAGGAGTTTGATGCCGCATA+TGG | 0.462290 | 5.2:+25456455 | MS.gene44186:CDS |
| GTTTACTGGAGAATGGAGAT+TGG | 0.464299 | 5.2:+25459811 | MS.gene44186:CDS |
| CAAGCGAGGAACTGATTTCT+CGG | 0.465423 | 5.2:+25459392 | MS.gene44186:CDS |
| TGCGTCTCTGCAACAACAGC+AGG | 0.469429 | 5.2:-25459525 | None:intergenic |
| ATTTCTCGGATGAGTTCATC+AGG | 0.474442 | 5.2:+25459406 | MS.gene44186:CDS |
| CTTATGGTGGAGTGGGTGGT+CGG | 0.475956 | 5.2:+25461943 | MS.gene44186:CDS |
| CTGTTGATAAATCTCTTAGA+AGG | 0.476108 | 5.2:+25456643 | MS.gene44186:CDS |
| CGCTATTGTGTGCTTGCTTG+CGG | 0.480160 | 5.2:+25456350 | MS.gene44186:CDS |
| TTATGGTGGAGTGGGTGGTC+GGG | 0.482674 | 5.2:+25461944 | MS.gene44186:CDS |
| ATTTCTCAGATGAGTCCATC+AGG | 0.490533 | 5.2:+25461034 | MS.gene44186:CDS |
| GGCACTGTCCTTGTTCTCAT+GGG | 0.495063 | 5.2:+25461859 | MS.gene44186:CDS |
| CCTTCAGGAGGGGCATTGGA+TGG | 0.505384 | 5.2:+25459356 | MS.gene44186:intron |
| CCAGGATCAAGGGCCTCTAC+AGG | 0.506135 | 5.2:+25461898 | MS.gene44186:CDS |
| CCTTCAGGAGGGGAATTGGA+TGG | 0.513114 | 5.2:+25460984 | MS.gene44186:intron |
| AATTACATACCCCAGGATCA+AGG | 0.516525 | 5.2:+25461887 | MS.gene44186:CDS |
| CATTGGATGGCATCTTCTAA+AGG | 0.517341 | 5.2:+25459369 | MS.gene44186:CDS |
| TCCAGTGGAGTGTTCCAAGA+AGG | 0.517349 | 5.2:-25461721 | None:intergenic |
| TGAAACAGTATTTGATTGAA+CGG | 0.524045 | 5.2:+25456433 | MS.gene44186:CDS |
| GGCTGAAGAGGATGAAAAGT+GGG | 0.530470 | 5.2:-25461758 | None:intergenic |
| GAACAAGAACAGGGCTGAAG+AGG | 0.534164 | 5.2:-25461770 | None:intergenic |
| AAGAGGAAATGCAGTTGGCT+GGG | 0.542657 | 5.2:+25456529 | MS.gene44186:CDS |
| AATGGTAGCAAATATGATCA+AGG | 0.543075 | 5.2:+25459779 | MS.gene44186:CDS |
| CCAGTGGAGTGTTCCAAGAA+GGG | 0.543783 | 5.2:-25461720 | None:intergenic |
| GAAAACAGCTTATGGTGGAG+TGG | 0.549378 | 5.2:+25461935 | MS.gene44186:CDS |
| TCTACAGGAGCAACTCGAGT+TGG | 0.549387 | 5.2:+25461913 | MS.gene44186:CDS |
| TCTTTCGGCGGATCCGGCGA+CGG | 0.556296 | 5.2:-25456597 | None:intergenic |
| GGCAGTGGTGTTAATGGTGA+TGG | 0.556640 | 5.2:+25456501 | MS.gene44186:CDS |
| GCAACTATGACAATGGTGGC+TGG | 0.558581 | 5.2:-25461792 | None:intergenic |
| TTCAACTGAACTTCTCCTGA+TGG | 0.560795 | 5.2:-25461049 | None:intergenic |
| AACTCGAGTTGCTCCTGTAG+AGG | 0.565489 | 5.2:-25461911 | None:intergenic |
| AATCGATGATGTTTCCGAAA+GGG | 0.568903 | 5.2:+25456385 | MS.gene44186:CDS |
| TGTAGAGGCCCTTGATCCTG+GGG | 0.582357 | 5.2:-25461896 | None:intergenic |
| GCAATCAAAGTCGCCATATG+CGG | 0.587969 | 5.2:-25456468 | None:intergenic |
| ATTACATACCCCAGGATCAA+GGG | 0.590997 | 5.2:+25461888 | MS.gene44186:CDS |
| CAGCAAAGCAACTATGACAA+TGG | 0.595743 | 5.2:-25461799 | None:intergenic |
| AAAACAGCTTATGGTGGAGT+GGG | 0.600034 | 5.2:+25461936 | MS.gene44186:CDS |
| ACAGCTTATGGTGGAGTGGG+TGG | 0.605545 | 5.2:+25461939 | MS.gene44186:CDS |
| ATTCATGACCCATGAGAACA+AGG | 0.605807 | 5.2:-25461867 | None:intergenic |
| GGTCATGAATTACATACCCC+AGG | 0.611661 | 5.2:+25461880 | MS.gene44186:CDS |
| ATATAAGGCTTATCTTTCGG+CGG | 0.617990 | 5.2:-25456609 | None:intergenic |
| GGGCTGAAGAGGATGAAAAG+TGG | 0.618573 | 5.2:-25461759 | None:intergenic |
| TCTGAAGGCATACTTAAGAG+AGG | 0.626310 | 5.2:-25459571 | None:intergenic |
| TAAGCCTTATATTTGTAACA+TGG | 0.633641 | 5.2:+25456620 | MS.gene44186:CDS |
| GGAACACTCCACTGGACTGG+GGG | 0.633812 | 5.2:+25461728 | MS.gene44186:CDS |
| TAATGGTGATGGTGAAGAAG+AGG | 0.637013 | 5.2:+25456512 | MS.gene44186:CDS |
| GAATCGATGATGTTTCCGAA+AGG | 0.637311 | 5.2:+25456384 | MS.gene44186:CDS |
| TGGAACACTCCACTGGACTG+GGG | 0.640331 | 5.2:+25461727 | MS.gene44186:CDS |
| AGTTGGAAAACAGCTTATGG+TGG | 0.651088 | 5.2:+25461930 | MS.gene44186:CDS |
| GCGTCTCTGCAACATCAGCA+GGG | 0.652205 | 5.2:-25461156 | None:intergenic |
| TGAAGAAGAGGAAATGCAGT+TGG | 0.653928 | 5.2:+25456524 | MS.gene44186:CDS |
| GCATCTTCTAAAGGCAAGCG+AGG | 0.659909 | 5.2:+25459378 | MS.gene44186:CDS |
| AGAGACGCAAGCACTTGATG+TGG | 0.662379 | 5.2:+25461171 | MS.gene44186:CDS |
| CAAAGCAACTATGACAATGG+TGG | 0.674688 | 5.2:-25461796 | None:intergenic |
| AACAGTATTTGATTGAACGG+AGG | 0.685549 | 5.2:+25456436 | MS.gene44186:CDS |
| TGGTGGCTGGAACAAGAACA+GGG | 0.708517 | 5.2:-25461779 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAATAATAAATAGTTTA+CGG | + | chr5.2:25458519-25458538 | MS.gene44186:intron | 10.0% |
| !!! | AAATGTAATTAATTTTGTAT+AGG | + | chr5.2:25458423-25458442 | MS.gene44186:intron | 10.0% |
| !!! | AATGTAATTAATTTTGTATA+GGG | + | chr5.2:25458424-25458443 | MS.gene44186:intron | 10.0% |
| !! | AAAGAGTAATAAATAGTTAA+TGG | - | chr5.2:25458701-25458720 | None:intergenic | 15.0% |
| !! | AAATAACATTAATGTTTCAT+TGG | - | chr5.2:25458667-25458686 | None:intergenic | 15.0% |
| !! | AAATGTAATCAATTATGTAT+TGG | - | chr5.2:25458799-25458818 | None:intergenic | 15.0% |
| !! | AATTTGTATAGATAATCATT+TGG | + | chr5.2:25460638-25460657 | MS.gene44186:intron | 15.0% |
| !! | ATGTATTACATTTATAAGAA+TGG | - | chr5.2:25460839-25460858 | None:intergenic | 15.0% |
| !! | ATGTTATAATAGTTATAACA+AGG | - | chr5.2:25459036-25459055 | None:intergenic | 15.0% |
| !! | ATTATCTATACAAATTCAAA+AGG | - | chr5.2:25460634-25460653 | None:intergenic | 15.0% |
| !! | TAAAAATTAGTTAATGTGTT+TGG | - | chr5.2:25457293-25457312 | None:intergenic | 15.0% |
| !! | TAAATAGTTAATGGTATAAA+AGG | - | chr5.2:25458692-25458711 | None:intergenic | 15.0% |
| !! | TATCAAATTTGCAAAAAATT+TGG | + | chr5.2:25457462-25457481 | MS.gene44186:intron | 15.0% |
| !! | TGTATTACATTTATAAGAAT+GGG | - | chr5.2:25460838-25460857 | None:intergenic | 15.0% |
| !! | TTTCCATTATTTAAAGATTA+AGG | + | chr5.2:25457718-25457737 | MS.gene44186:intron | 15.0% |
| !!! | AAAAATTTGGACTATTTTAA+CGG | + | chr5.2:25457475-25457494 | MS.gene44186:intron | 15.0% |
| !! | AAACATGAATATAGATTGAA+TGG | + | chr5.2:25460742-25460761 | MS.gene44186:intron | 20.0% |
| !! | AAAGAAAATAATAATGCTAG+GGG | + | chr5.2:25460188-25460207 | MS.gene44186:intron | 20.0% |
| !! | AAGTTTAGACATTAGAATTA+TGG | - | chr5.2:25460562-25460581 | None:intergenic | 20.0% |
| !! | ACAAAATTATCCTTCATTAA+CGG | + | chr5.2:25458466-25458485 | MS.gene44186:intron | 20.0% |
| !! | ACCAAAATGACTAATAATTT+GGG | - | chr5.2:25458385-25458404 | None:intergenic | 20.0% |
| !! | ACCAATATAATACATATTCT+GGG | + | chr5.2:25457650-25457669 | MS.gene44186:intron | 20.0% |
| !! | AGCTATATTTAATATCAAAG+AGG | - | chr5.2:25457947-25457966 | None:intergenic | 20.0% |
| !! | ATATAGCTTATACATAAACA+TGG | + | chr5.2:25457959-25457978 | MS.gene44186:intron | 20.0% |
| !! | ATGCTAAAAGTTACTATTAT+AGG | - | chr5.2:25459171-25459190 | None:intergenic | 20.0% |
| !! | ATTTCTTAATCTGTGTAAAA+TGG | + | chr5.2:25458815-25458834 | MS.gene44186:intron | 20.0% |
| !! | CAACCTTAATCTTTAAATAA+TGG | - | chr5.2:25457724-25457743 | None:intergenic | 20.0% |
| !! | GAAAGAAAATAATAATGCTA+GGG | + | chr5.2:25460187-25460206 | MS.gene44186:intron | 20.0% |
| !! | GAAATGCATAAATTTAACAA+TGG | - | chr5.2:25457237-25457256 | None:intergenic | 20.0% |
| !! | TATATATTTCTCTTATCTGT+AGG | + | chr5.2:25459847-25459866 | MS.gene44186:intron | 20.0% |
| !! | TGAAAGAAAATAATAATGCT+AGG | + | chr5.2:25460186-25460205 | MS.gene44186:intron | 20.0% |
| !! | TGTAAAACGACATATAATTT+GGG | - | chr5.2:25458641-25458660 | None:intergenic | 20.0% |
| !! | TTACAAATATTAAAGATGCA+TGG | + | chr5.2:25460022-25460041 | MS.gene44186:intron | 20.0% |
| !! | TTGTAAAACGACATATAATT+TGG | - | chr5.2:25458642-25458661 | None:intergenic | 20.0% |
| !!! | AAAATTTGAGCTTTTATCAA+CGG | - | chr5.2:25459697-25459716 | None:intergenic | 20.0% |
| !!! | AAATCAACTATACATTCTTT+TGG | - | chr5.2:25456752-25456771 | None:intergenic | 20.0% |
| !!! | AACATAAATTTCTAGTAATG+TGG | - | chr5.2:25456974-25456993 | None:intergenic | 20.0% |
| !!! | ACATATTGATTTTTTTTGGT+AGG | - | chr5.2:25458988-25459007 | None:intergenic | 20.0% |
| !!! | AGTTGACATATTGATTTTTT+TGG | - | chr5.2:25458964-25458983 | None:intergenic | 20.0% |
| !!! | GAGATTTCTTTTAATGTTTA+TGG | + | chr5.2:25456558-25456577 | MS.gene44186:CDS | 20.0% |
| !!! | GTTGACATATTGATTTTTTT+GGG | - | chr5.2:25458963-25458982 | None:intergenic | 20.0% |
| !!! | GTTGACATATTGATTTTTTT+TGG | - | chr5.2:25458963-25458982 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTTATAGAAGAA+AGG | - | chr5.2:25461366-25461385 | None:intergenic | 20.0% |
| !!! | TTTACAAGTTCCATAATTTT+AGG | - | chr5.2:25460884-25460903 | None:intergenic | 20.0% |
| !!! | TTTTATAGAAGAAAGGAAAA+AGG | - | chr5.2:25461359-25461378 | None:intergenic | 20.0% |
| ! | AAAAAAGAGTGAACTCTATT+TGG | - | chr5.2:25460466-25460485 | None:intergenic | 25.0% |
| ! | AAGAAAATAATAATGCTAGG+GGG | + | chr5.2:25460189-25460208 | MS.gene44186:intron | 25.0% |
| ! | ACAAAATTATCCTTCGTTAA+TGG | - | chr5.2:25458752-25458771 | None:intergenic | 25.0% |
| ! | AGCTTAATTATTTATACTGC+AGG | - | chr5.2:25458303-25458322 | None:intergenic | 25.0% |
| ! | ATAAGGTTGAAGAATAGAAA+AGG | + | chr5.2:25460302-25460321 | MS.gene44186:intron | 25.0% |
| ! | ATTACATTTATAAGAATGGG+AGG | - | chr5.2:25460835-25460854 | None:intergenic | 25.0% |
| ! | ATTAGAATCAAACAACATTC+AGG | - | chr5.2:25460946-25460965 | None:intergenic | 25.0% |
| ! | CAAATATAAGGCTTATCTTT+CGG | - | chr5.2:25456615-25456634 | None:intergenic | 25.0% |
| ! | GAATTATGGACAAATCTATT+TGG | - | chr5.2:25460548-25460567 | None:intergenic | 25.0% |
| ! | GACCAAAATGACTAATAATT+TGG | - | chr5.2:25458386-25458405 | None:intergenic | 25.0% |
| ! | GACCAATATAATACATATTC+TGG | + | chr5.2:25457649-25457668 | MS.gene44186:intron | 25.0% |
| ! | GAGCTTATGTAAATAGTTTA+TGG | + | chr5.2:25457825-25457844 | MS.gene44186:intron | 25.0% |
| ! | GATTGAATTAAATGTTGAGA+AGG | - | chr5.2:25461487-25461506 | None:intergenic | 25.0% |
| ! | GTACTTCATTATAAATTACC+AGG | + | chr5.2:25459972-25459991 | MS.gene44186:intron | 25.0% |
| ! | GTCAAAACGACTTATAATTT+GGG | + | chr5.2:25458837-25458856 | MS.gene44186:intron | 25.0% |
| ! | TAAATAGTTTACGGTATAGT+AGG | + | chr5.2:25458528-25458547 | MS.gene44186:intron | 25.0% |
| ! | TAATGAGTTAGATCGAAATA+GGG | + | chr5.2:25457140-25457159 | MS.gene44186:intron | 25.0% |
| ! | TCCCAGAATATGTATTATAT+TGG | - | chr5.2:25457654-25457673 | None:intergenic | 25.0% |
| ! | TGAAACAGTATTTGATTGAA+CGG | + | chr5.2:25456433-25456452 | MS.gene44186:CDS | 25.0% |
| ! | TGACATAGTAAATGAATATG+TGG | - | chr5.2:25457371-25457390 | None:intergenic | 25.0% |
| ! | TTAATGAGTTAGATCGAAAT+AGG | + | chr5.2:25457139-25457158 | MS.gene44186:intron | 25.0% |
| ! | TTATCAGAGAAATAAGTTCA+GGG | - | chr5.2:25457595-25457614 | None:intergenic | 25.0% |
| ! | TTTATCAGAGAAATAAGTTC+AGG | - | chr5.2:25457596-25457615 | None:intergenic | 25.0% |
| !! | AATACACATAAAATTTGCTC+TGG | + | chr5.2:25460047-25460066 | MS.gene44186:intron | 25.0% |
| !! | ACAATTTTGTAATCAGCTTT+TGG | - | chr5.2:25459484-25459503 | None:intergenic | 25.0% |
| !! | ACAGAAACATTTTACGTATA+AGG | - | chr5.2:25459738-25459757 | None:intergenic | 25.0% |
| !! | AGCTTAAAACAAGTTGAAAT+TGG | - | chr5.2:25457863-25457882 | None:intergenic | 25.0% |
| !! | ATTATTATTTTCTTTCAGCC+AGG | - | chr5.2:25460183-25460202 | None:intergenic | 25.0% |
| !! | GAGAGTACATTATTACAATT+TGG | - | chr5.2:25458349-25458368 | None:intergenic | 25.0% |
| !! | GCTTTTGTATACATGTTAAA+TGG | - | chr5.2:25459469-25459488 | None:intergenic | 25.0% |
| !! | TAAGCCTTATATTTGTAACA+TGG | + | chr5.2:25456620-25456639 | MS.gene44186:CDS | 25.0% |
| !! | TACAATTTGGAATTCATTGA+TGG | - | chr5.2:25458336-25458355 | None:intergenic | 25.0% |
| !! | TCCCAAATTATTAGTCATTT+TGG | + | chr5.2:25458381-25458400 | MS.gene44186:intron | 25.0% |
| !! | TCTTTTAGATTTGTCCATAA+TGG | + | chr5.2:25460331-25460350 | MS.gene44186:intron | 25.0% |
| !! | TTATACGTAAAATGTTTCTG+TGG | + | chr5.2:25459737-25459756 | MS.gene44186:intron | 25.0% |
| !! | TTGCATTTGTTGGATTAATT+TGG | + | chr5.2:25456698-25456717 | MS.gene44186:intron | 25.0% |
| !!! | AGGTTAAGTAGGATATTTTT+TGG | + | chr5.2:25458117-25458136 | MS.gene44186:intron | 25.0% |
| !!! | AGTTGATTTGAAGAATCAAT+AGG | + | chr5.2:25456763-25456782 | MS.gene44186:intron | 25.0% |
| !!! | ATCAACCTTTAATTTGAAAG+TGG | + | chr5.2:25460125-25460144 | MS.gene44186:intron | 25.0% |
| !!! | ATTGGTTTGGTGTATATATA+TGG | + | chr5.2:25460433-25460452 | MS.gene44186:intron | 25.0% |
| !!! | GAAAGTATTTAACACTAACA+AGG | - | chr5.2:25458160-25458179 | None:intergenic | 25.0% |
| !!! | GGTTAAGTAGGATATTTTTT+GGG | + | chr5.2:25458118-25458137 | MS.gene44186:intron | 25.0% |
| !!! | GTTGATTTGAAGAATCAATA+GGG | + | chr5.2:25456764-25456783 | MS.gene44186:intron | 25.0% |
| !!! | TAATTTTTTACTCTTCTGCT+AGG | + | chr5.2:25458097-25458116 | MS.gene44186:intron | 25.0% |
| !!! | TTTATGTTTTGTTTCAGCAA+TGG | + | chr5.2:25459761-25459780 | MS.gene44186:intron | 25.0% |
| !!! | TTTTTTTTTACCTTTTCCTG+TGG | + | chr5.2:25459109-25459128 | MS.gene44186:intron | 25.0% |
| AAACGACTTATAATTTGGGA+CGG | + | chr5.2:25458841-25458860 | MS.gene44186:intron | 30.0% | |
| AACACCTTAATATACCCTTT+CGG | - | chr5.2:25456402-25456421 | None:intergenic | 30.0% | |
| AAGCTAGAACTATTAGAAGT+GGG | + | chr5.2:25458043-25458062 | MS.gene44186:intron | 30.0% | |
| AAGGAAAGTAAGTCAAATAG+AGG | + | chr5.2:25457062-25457081 | MS.gene44186:intron | 30.0% | |
| AAGTAAGTCAAATAGAGGAT+AGG | + | chr5.2:25457067-25457086 | MS.gene44186:intron | 30.0% | |
| AATGGTAGCAAATATGATCA+AGG | + | chr5.2:25459779-25459798 | MS.gene44186:CDS | 30.0% | |
| ACAACATTACACATGCTTTA+AGG | + | chr5.2:25456669-25456688 | MS.gene44186:intron | 30.0% | |
| ACAGCCATGTTACAAATATA+AGG | - | chr5.2:25456627-25456646 | None:intergenic | 30.0% | |
| AGACAACATTTATGTGTTCA+AGG | + | chr5.2:25459629-25459648 | MS.gene44186:intron | 30.0% | |
| AGATACTTGAGCTTATCTAT+TGG | + | chr5.2:25457772-25457791 | MS.gene44186:intron | 30.0% | |
| ATAGTTTATGGCATGTCTAT+AGG | + | chr5.2:25457837-25457856 | MS.gene44186:intron | 30.0% | |
| ATGCATTTCATGTCAACATT+AGG | + | chr5.2:25457248-25457267 | MS.gene44186:intron | 30.0% | |
| ATTGGGAGGACTAATTAAAA+TGG | + | chr5.2:25456807-25456826 | MS.gene44186:intron | 30.0% | |
| CATTCAAACTAGAGTGAATA+GGG | - | chr5.2:25457527-25457546 | None:intergenic | 30.0% | |
| CATTTAACATGCAATGTCAT+AGG | - | chr5.2:25456927-25456946 | None:intergenic | 30.0% | |
| CTCAAAGCGACTTATAATTT+GGG | + | chr5.2:25458893-25458912 | MS.gene44186:intron | 30.0% | |
| GGTCAAAACGACTTATAATT+TGG | + | chr5.2:25458836-25458855 | MS.gene44186:intron | 30.0% | |
| GTTAGAATCCAATTACATTC+AGG | - | chr5.2:25459320-25459339 | None:intergenic | 30.0% | |
| TAACTGTAGAAGTTATGAGA+GGG | + | chr5.2:25457400-25457419 | MS.gene44186:intron | 30.0% | |
| TAAGCTAGAACTATTAGAAG+TGG | + | chr5.2:25458042-25458061 | MS.gene44186:intron | 30.0% | |
| TAATTTCTGTATGTGCATCA+AGG | + | chr5.2:25460094-25460113 | MS.gene44186:intron | 30.0% | |
| TACTCATAGTCATTAGAACA+TGG | - | chr5.2:25459607-25459626 | None:intergenic | 30.0% | |
| TATAGAAGAAAGGAAAAAGG+TGG | - | chr5.2:25461356-25461375 | None:intergenic | 30.0% | |
| TATATTCATGTTTGCCAATC+TGG | - | chr5.2:25460735-25460754 | None:intergenic | 30.0% | |
| TCATTCAAACTAGAGTGAAT+AGG | - | chr5.2:25457528-25457547 | None:intergenic | 30.0% | |
| TCTCAAAGCGACTTATAATT+TGG | + | chr5.2:25458892-25458911 | MS.gene44186:intron | 30.0% | |
| TGAAGAATCAATAGGGAAAT+TGG | + | chr5.2:25456771-25456790 | MS.gene44186:intron | 30.0% | |
| TGCATTTCATGTCAACATTA+GGG | + | chr5.2:25457249-25457268 | MS.gene44186:intron | 30.0% | |
| TTAATATCAAAGAGGAAACG+TGG | - | chr5.2:25457939-25457958 | None:intergenic | 30.0% | |
| TTATCAACGGTAAGAGATAA+TGG | - | chr5.2:25459684-25459703 | None:intergenic | 30.0% | |
| ! | ACATTTTACGTATAAGGTAG+TGG | - | chr5.2:25459732-25459751 | None:intergenic | 30.0% |
| ! | ACTTTGATTGCGTTTTATAG+AGG | + | chr5.2:25456480-25456499 | MS.gene44186:CDS | 30.0% |
| ! | ATACTTGTGCTGATGTTAAT+TGG | + | chr5.2:25460415-25460434 | MS.gene44186:intron | 30.0% |
| ! | ATTTTACGTATAAGGTAGTG+GGG | - | chr5.2:25459730-25459749 | None:intergenic | 30.0% |
| ! | CATTTTACGTATAAGGTAGT+GGG | - | chr5.2:25459731-25459750 | None:intergenic | 30.0% |
| ! | CTGTTGATAAATCTCTTAGA+AGG | + | chr5.2:25456643-25456662 | MS.gene44186:CDS | 30.0% |
| ! | CTTTTCAATACCATTAACGA+AGG | + | chr5.2:25458739-25458758 | MS.gene44186:intron | 30.0% |
| ! | CTTTTCATCATTTAGCTATC+AGG | - | chr5.2:25459940-25459959 | None:intergenic | 30.0% |
| ! | GACATGTGAATTTTGTAGTA+AGG | + | chr5.2:25457043-25457062 | MS.gene44186:intron | 30.0% |
| ! | GTTTTACACCTGAATGTAAT+TGG | + | chr5.2:25459309-25459328 | MS.gene44186:intron | 30.0% |
| ! | TAAAAGTTCAAGTTCAAGCA+AGG | - | chr5.2:25458193-25458212 | None:intergenic | 30.0% |
| ! | TTTGATGATCTTACAAGATG+AGG | - | chr5.2:25460365-25460384 | None:intergenic | 30.0% |
| !! | ATTGGTGTTTGACTTGATAT+TGG | + | chr5.2:25456789-25456808 | MS.gene44186:intron | 30.0% |
| !! | CTTTTTCATACCGTTAATGA+AGG | - | chr5.2:25458479-25458498 | None:intergenic | 30.0% |
| !! | TTGGTGTTTGACTTGATATT+GGG | + | chr5.2:25456790-25456809 | MS.gene44186:intron | 30.0% |
| !!! | GTTTTAAGTTTACTGGAGAA+TGG | + | chr5.2:25459804-25459823 | MS.gene44186:CDS | 30.0% |
| AAATAACATGGTGAGAACGT+AGG | - | chr5.2:25461315-25461334 | None:intergenic | 35.0% | |
| AACAGTATTTGATTGAACGG+AGG | + | chr5.2:25456436-25456455 | MS.gene44186:CDS | 35.0% | |
| AAGCGACTTATAATTTGGGA+CGG | - | chr5.2:25458916-25458897 | None:intergenic | 35.0% | |
| AAGCGACTTATAATTTGGGA+TGG | + | chr5.2:25458897-25458916 | MS.gene44186:intron | 35.0% | |
| AAGTAATGAGCAGCATTCAA+TGG | - | chr5.2:25460683-25460702 | None:intergenic | 35.0% | |
| AATCGATGATGTTTCCGAAA+GGG | + | chr5.2:25456385-25456404 | MS.gene44186:CDS | 35.0% | |
| ACTATTAGAAGTGGGTGAAA+AGG | + | chr5.2:25458051-25458070 | MS.gene44186:intron | 35.0% | |
| AGCATCCAAGATTAAGATTG+AGG | + | chr5.2:25459186-25459205 | MS.gene44186:intron | 35.0% | |
| ATATAAGGCTTATCTTTCGG+CGG | - | chr5.2:25456612-25456631 | None:intergenic | 35.0% | |
| ATGAGGAACTAAGTCCATTA+TGG | - | chr5.2:25460348-25460367 | None:intergenic | 35.0% | |
| ATGCAAGCCATTAGAATTTC+AGG | - | chr5.2:25459233-25459252 | None:intergenic | 35.0% | |
| ATTAGGGCTATTATCACTTC+AGG | + | chr5.2:25457265-25457284 | MS.gene44186:intron | 35.0% | |
| ATTGGTCAAATTTGTCCTCA+TGG | - | chr5.2:25457636-25457655 | None:intergenic | 35.0% | |
| CAACTTCATAACGATGTTGA+GGG | - | chr5.2:25461588-25461607 | None:intergenic | 35.0% | |
| CATGTTCAATTTAATCCCCA+TGG | + | chr5.2:25457325-25457344 | MS.gene44186:intron | 35.0% | |
| CTAACTGTAGAAGTTATGAG+AGG | + | chr5.2:25457399-25457418 | MS.gene44186:intron | 35.0% | |
| CTATTAGAAGTGGGTGAAAA+GGG | + | chr5.2:25458052-25458071 | MS.gene44186:intron | 35.0% | |
| CTGCTGTATGCCTAAAATTA+TGG | + | chr5.2:25460871-25460890 | MS.gene44186:intron | 35.0% | |
| GAAAGAATGATGTCATAACC+TGG | - | chr5.2:25459993-25460012 | None:intergenic | 35.0% | |
| GATGACACGTACAAATAACA+TGG | - | chr5.2:25461327-25461346 | None:intergenic | 35.0% | |
| GCACGTTAAATTCATGCATT+TGG | + | chr5.2:25456994-25457013 | MS.gene44186:intron | 35.0% | |
| GGTTACCTCAATCTTAATCT+TGG | - | chr5.2:25459194-25459213 | None:intergenic | 35.0% | |
| TCAGGAGGAGAATATATCTT+TGG | - | chr5.2:25459215-25459234 | None:intergenic | 35.0% | |
| TCATTTACCTGTAACACAAC+AGG | - | chr5.2:25459880-25459899 | None:intergenic | 35.0% | |
| TCCCAAATTATAAGTCGCTT+CGG | + | chr5.2:25458602-25458621 | MS.gene44186:intron | 35.0% | |
| TCGTAACGAGTTAGTCAAAA+TGG | - | chr5.2:25457427-25457446 | None:intergenic | 35.0% | |
| TGAACATGTGATCTTACATG+TGG | + | chr5.2:25456945-25456964 | MS.gene44186:intron | 35.0% | |
| TGTGGCTAAATGCATATTCA+GGG | + | chr5.2:25457682-25457701 | MS.gene44186:intron | 35.0% | |
| TTACACATCTATATACGCTC+CGG | - | chr5.2:25458025-25458044 | None:intergenic | 35.0% | |
| TTCTCCTCCTGAAATTCTAA+TGG | + | chr5.2:25459223-25459242 | MS.gene44186:intron | 35.0% | |
| ! | ATCTATTTGGAGCTTTCCAT+CGG | - | chr5.2:25460535-25460554 | None:intergenic | 35.0% |
| ! | GACTTATAATTTGGGATGGA+GGG | + | chr5.2:25458901-25458920 | MS.gene44186:intron | 35.0% |
| ! | GTTTCCGAAAGGGTATATTA+AGG | + | chr5.2:25456395-25456414 | MS.gene44186:CDS | 35.0% |
| ! | TATTTTCTTTCAGCCAGGAT+TGG | - | chr5.2:25460178-25460197 | None:intergenic | 35.0% |
| ! | TGTGCTGATGTTAATTGGTT+TGG | + | chr5.2:25460420-25460439 | MS.gene44186:intron | 35.0% |
| !! | AAGGCTTGATTTGCATTTGT+TGG | + | chr5.2:25456688-25456707 | MS.gene44186:intron | 35.0% |
| !! | ACCTTTAATTTGAAAGTGGC+AGG | + | chr5.2:25460129-25460148 | MS.gene44186:intron | 35.0% |
| !! | CATGACAAATCTGTTTCTGA+AGG | - | chr5.2:25461219-25461238 | None:intergenic | 35.0% |
| !! | TATTCTGGGACTAATTTGTG+TGG | + | chr5.2:25457664-25457683 | MS.gene44186:intron | 35.0% |
| !!! | CAACTTGTTTTAAGCTCTCA+AGG | + | chr5.2:25457867-25457886 | MS.gene44186:intron | 35.0% |
| !!! | CAAGGTCGTTTTAAGTTTAC+TGG | + | chr5.2:25459797-25459816 | MS.gene44186:CDS | 35.0% |
| !!! | TTGTTTTAAGCTCTCAAGGA+TGG | + | chr5.2:25457871-25457890 | MS.gene44186:intron | 35.0% |
| AAAGAGACCTGTTGTGTTAC+AGG | + | chr5.2:25459870-25459889 | MS.gene44186:intron | 40.0% | |
| AAGTGTCTTGCCGTAATTAC+CGG | + | chr5.2:25461655-25461674 | MS.gene44186:intron | 40.0% | |
| AATTACATACCCCAGGATCA+AGG | + | chr5.2:25461887-25461906 | MS.gene44186:CDS | 40.0% | |
| ACTCAAAGAAAGTAGACCAC+AGG | - | chr5.2:25459128-25459147 | None:intergenic | 40.0% | |
| ACTCTTCTGCTAGGTTAAGT+AGG | + | chr5.2:25458106-25458125 | MS.gene44186:intron | 40.0% | |
| AGAAAGTAGACCACAGGAAA+AGG | - | chr5.2:25459122-25459141 | None:intergenic | 40.0% | |
| AGTTGGAAAACAGCTTATGG+TGG | + | chr5.2:25461930-25461949 | MS.gene44186:CDS | 40.0% | |
| ATTACATACCCCAGGATCAA+GGG | + | chr5.2:25461888-25461907 | MS.gene44186:CDS | 40.0% | |
| ATTCATGACCCATGAGAACA+AGG | - | chr5.2:25461870-25461889 | None:intergenic | 40.0% | |
| ATTTCTCAGATGAGTCCATC+AGG | + | chr5.2:25461034-25461053 | MS.gene44186:CDS | 40.0% | |
| ATTTCTCGGATGAGTTCATC+AGG | + | chr5.2:25459406-25459425 | MS.gene44186:CDS | 40.0% | |
| CAAAGCAACTATGACAATGG+TGG | - | chr5.2:25461799-25461818 | None:intergenic | 40.0% | |
| CAACATCGTTATGAAGTTGG+TGG | + | chr5.2:25461589-25461608 | MS.gene44186:intron | 40.0% | |
| CAAGCCATTAGAATTTCAGG+AGG | - | chr5.2:25459230-25459249 | None:intergenic | 40.0% | |
| CAATTTAATCCCCATGGTGT+AGG | + | chr5.2:25457331-25457350 | MS.gene44186:intron | 40.0% | |
| CAGCAAAGCAACTATGACAA+TGG | - | chr5.2:25461802-25461821 | None:intergenic | 40.0% | |
| CATTGGATGGCATCTTCTAA+AGG | + | chr5.2:25459369-25459388 | MS.gene44186:CDS | 40.0% | |
| CCAACTTCATAACGATGTTG+AGG | - | chr5.2:25461589-25461608 | None:intergenic | 40.0% | |
| CCCAAATTATAAGTCGCTTC+GGG | + | chr5.2:25458603-25458622 | MS.gene44186:intron | 40.0% | |
| CCCGAAGCGACTTATAATTT+GGG | - | chr5.2:25458606-25458625 | None:intergenic | 40.0% | |
| CCTCAACATCGTTATGAAGT+TGG | + | chr5.2:25461586-25461605 | MS.gene44186:intron | 40.0% | |
| CTATTGAACCATACCAATCC+TGG | + | chr5.2:25460162-25460181 | MS.gene44186:intron | 40.0% | |
| CTTTGAGTCAATGCATGCTA+TGG | + | chr5.2:25459140-25459159 | MS.gene44186:intron | 40.0% | |
| GAATCGATGATGTTTCCGAA+AGG | + | chr5.2:25456384-25456403 | MS.gene44186:CDS | 40.0% | |
| GTGGCTAAATGCATATTCAG+GGG | + | chr5.2:25457683-25457702 | MS.gene44186:intron | 40.0% | |
| GTGTGGCTAAATGCATATTC+AGG | + | chr5.2:25457681-25457700 | MS.gene44186:intron | 40.0% | |
| GTTGTTTATTCAAACCCTCC+CGG | + | chr5.2:25458003-25458022 | MS.gene44186:intron | 40.0% | |
| GTTTACTGGAGAATGGAGAT+TGG | + | chr5.2:25459811-25459830 | MS.gene44186:CDS | 40.0% | |
| TAACACTGGTATCGTAACAG+CGG | - | chr5.2:25461565-25461584 | None:intergenic | 40.0% | |
| TAATGAGCAGCATTCAATGG+TGG | - | chr5.2:25460680-25460699 | None:intergenic | 40.0% | |
| TACACATCTATATACGCTCC+GGG | - | chr5.2:25458024-25458043 | None:intergenic | 40.0% | |
| TCACAAACCAATTCACGTGT+AGG | - | chr5.2:25457749-25457768 | None:intergenic | 40.0% | |
| TCCCGAAGCGACTTATAATT+TGG | - | chr5.2:25458607-25458626 | None:intergenic | 40.0% | |
| TGAAGAAGAGGAAATGCAGT+TGG | + | chr5.2:25456524-25456543 | MS.gene44186:CDS | 40.0% | |
| TTCAACCTTATCATCACCCT+TGG | - | chr5.2:25460293-25460312 | None:intergenic | 40.0% | |
| TTCAACTGAACTTCTCCTGA+TGG | - | chr5.2:25461052-25461071 | None:intergenic | 40.0% | |
| ! | AAAACAGCTTATGGTGGAGT+GGG | + | chr5.2:25461936-25461955 | MS.gene44186:CDS | 40.0% |
| ! | ACTTTTAGCACAGACAGAGT+AGG | + | chr5.2:25458206-25458225 | MS.gene44186:intron | 40.0% |
| ! | ATTGCGTTTTATAGAGGCAG+TGG | + | chr5.2:25456486-25456505 | MS.gene44186:CDS | 40.0% |
| ! | CGACTTATAATTTGGGATGG+AGG | + | chr5.2:25458900-25458919 | MS.gene44186:intron | 40.0% |
| ! | CTTTTAGCACAGACAGAGTA+GGG | + | chr5.2:25458207-25458226 | MS.gene44186:intron | 40.0% |
| ! | GACTTATAATTTGGGACGGA+GGG | + | chr5.2:25458845-25458864 | MS.gene44186:intron | 40.0% |
| ! | GACTTATAATTTGGGACGGA+GGG | - | chr5.2:25458864-25458845 | None:intergenic | 40.0% |
| ! | GTTCTGACATTGTTGATGAG+AGG | - | chr5.2:25461530-25461549 | None:intergenic | 40.0% |
| ! | TATAGAGGCAGTGGTGTTAA+TGG | + | chr5.2:25456495-25456514 | MS.gene44186:CDS | 40.0% |
| ! | TCTGAAGGCATACTTAAGAG+AGG | - | chr5.2:25459574-25459593 | None:intergenic | 40.0% |
| ! | TGTTTCTGAAGGCATACTTG+TGG | - | chr5.2:25461208-25461227 | None:intergenic | 40.0% |
| !! | GCCTGCCACTTTCAAATTAA+AGG | - | chr5.2:25460133-25460152 | None:intergenic | 40.0% |
| !! | GTGTTTGACTTGATATTGGG+AGG | + | chr5.2:25456793-25456812 | MS.gene44186:intron | 40.0% |
| !! | TAATGGTGATGGTGAAGAAG+AGG | + | chr5.2:25456512-25456531 | MS.gene44186:CDS | 40.0% |
| !! | TAGAAGTGTCAAGAACCATG+AGG | + | chr5.2:25457618-25457637 | MS.gene44186:intron | 40.0% |
| !! | TCGAGTTGGAAAACAGCTTA+TGG | + | chr5.2:25461927-25461946 | MS.gene44186:CDS | 40.0% |
| AACGATGTTGAGGGTAACAC+TGG | - | chr5.2:25461579-25461598 | None:intergenic | 45.0% | |
| AAGAGGAAATGCAGTTGGCT+GGG | + | chr5.2:25456529-25456548 | MS.gene44186:CDS | 45.0% | |
| CACGTAAATCCTACACCATG+GGG | - | chr5.2:25457343-25457362 | None:intergenic | 45.0% | |
| CCACGTAAATCCTACACCAT+GGG | - | chr5.2:25457344-25457363 | None:intergenic | 45.0% | |
| GCAAGACACTTGAGAAGTGA+TGG | - | chr5.2:25461646-25461665 | None:intergenic | 45.0% | |
| GCAATCAAAGTCGCCATATG+CGG | - | chr5.2:25456471-25456490 | None:intergenic | 45.0% | |
| GCTGTCAGTCTCTTTCTCTT+AGG | + | chr5.2:25460231-25460250 | MS.gene44186:intron | 45.0% | |
| GGCTGAAGAGGATGAAAAGT+GGG | - | chr5.2:25461761-25461780 | None:intergenic | 45.0% | |
| GGTCATGAATTACATACCCC+AGG | + | chr5.2:25461880-25461899 | MS.gene44186:CDS | 45.0% | |
| GTAGACCAAGGGTGATGATA+AGG | + | chr5.2:25460285-25460304 | MS.gene44186:intron | 45.0% | |
| GTCAAATAGAGGATAGGCAG+AGG | + | chr5.2:25457073-25457092 | MS.gene44186:intron | 45.0% | |
| GTCTACTTCTACCACACCTT+CGG | - | chr5.2:25460271-25460290 | None:intergenic | 45.0% | |
| GTGTGGTAGAAGTAGACCAA+GGG | + | chr5.2:25460274-25460293 | MS.gene44186:intron | 45.0% | |
| TAATTCTACTCTTCCGTCGC+CGG | + | chr5.2:25456584-25456603 | MS.gene44186:CDS | 45.0% | |
| TACACATCTCGATGCCAGAT+TGG | + | chr5.2:25460718-25460737 | MS.gene44186:intron | 45.0% | |
| TACAGGAAGGCCGGTAATTA+CGG | - | chr5.2:25461668-25461687 | None:intergenic | 45.0% | |
| TCACCTTACAAAGCTTCTCG+CGG | + | chr5.2:25460795-25460814 | MS.gene44186:intron | 45.0% | |
| TCCACGTAAATCCTACACCA+TGG | - | chr5.2:25457345-25457364 | None:intergenic | 45.0% | |
| TCTCTTAGGTACCTTTCACG+TGG | + | chr5.2:25460245-25460264 | MS.gene44186:intron | 45.0% | |
| TTTGAAAGTGGCAGGCACAT+TGG | + | chr5.2:25460137-25460156 | MS.gene44186:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.2:25457209-25457228 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.2:25457210-25457229 | None:intergenic | 45.0% |
| ! | CAAGCGAGGAACTGATTTCT+CGG | + | chr5.2:25459392-25459411 | MS.gene44186:CDS | 45.0% |
| ! | CGACTTATAATTTGGGACGG+AGG | + | chr5.2:25458844-25458863 | MS.gene44186:intron | 45.0% |
| ! | CGACTTATAATTTGGGACGG+AGG | - | chr5.2:25458863-25458844 | None:intergenic | 45.0% |
| ! | CTAAGAGTGTGTTTCCCTTC+AGG | + | chr5.2:25460969-25460988 | MS.gene44186:intron | 45.0% |
| ! | GAAAACAGCTTATGGTGGAG+TGG | + | chr5.2:25461935-25461954 | MS.gene44186:CDS | 45.0% |
| ! | GGACGGAGGGAGTATAATTT+GGG | + | chr5.2:25458858-25458877 | MS.gene44186:intron | 45.0% |
| ! | TCAAGCCTTATCCCACTAAG+TGG | - | chr5.2:25457211-25457230 | None:intergenic | 45.0% |
| ! | TCTGTGTGTGATGATGAGGT+GGG | - | chr5.2:25461401-25461420 | None:intergenic | 45.0% |
| ! | TCTTTCAGCCAGGATTGGTA+TGG | - | chr5.2:25460173-25460192 | None:intergenic | 45.0% |
| ! | TGTGTCTGTGTGTGATGATG+AGG | - | chr5.2:25461405-25461424 | None:intergenic | 45.0% |
| !! | CATGGCACGTTTGTTTCTGA+AGG | - | chr5.2:25459589-25459608 | None:intergenic | 45.0% |
| !! | CTTTGCTGTCGCTGTCTTTT+TGG | + | chr5.2:25461814-25461833 | MS.gene44186:CDS | 45.0% |
| !! | GGAGAATGGAGATTGGTTTC+AGG | + | chr5.2:25459818-25459837 | MS.gene44186:intron | 45.0% |
| !! | TTCTAAGAGTGTCTCCCTTC+AGG | + | chr5.2:25459341-25459360 | MS.gene44186:intron | 45.0% |
| ACATCTATATACGCTCCGGG+AGG | - | chr5.2:25458021-25458040 | None:intergenic | 50.0% | |
| ACTGGTATCGTAACAGCGGT+GGG | - | chr5.2:25461561-25461580 | None:intergenic | 50.0% | |
| AGAGACGCAAGCACTTGATG+TGG | + | chr5.2:25461171-25461190 | MS.gene44186:CDS | 50.0% | |
| AGAGTGTGTTTCCCTTCAGG+AGG | + | chr5.2:25460972-25460991 | MS.gene44186:intron | 50.0% | |
| AGTGTGTTTCCCTTCAGGAG+GGG | + | chr5.2:25460974-25460993 | MS.gene44186:intron | 50.0% | |
| ATGGTGGCTGGAACAAGAAC+AGG | - | chr5.2:25461783-25461802 | None:intergenic | 50.0% | |
| CATCCAATTCCCCTCCTGAA+GGG | - | chr5.2:25460986-25461005 | None:intergenic | 50.0% | |
| CATCTATATACGCTCCGGGA+GGG | - | chr5.2:25458020-25458039 | None:intergenic | 50.0% | |
| CCCATGGTGTAGGATTTACG+TGG | + | chr5.2:25457341-25457360 | MS.gene44186:intron | 50.0% | |
| CGCTATTGTGTGCTTGCTTG+CGG | + | chr5.2:25456350-25456369 | MS.gene44186:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.2:25457205-25457224 | None:intergenic | 50.0% | |
| GAACAAGAACAGGGCTGAAG+AGG | - | chr5.2:25461773-25461792 | None:intergenic | 50.0% | |
| GAAGAGGAAATGCAGTTGGC+TGG | + | chr5.2:25456528-25456547 | MS.gene44186:CDS | 50.0% | |
| GAGGAGTTTGATGCCGCATA+TGG | + | chr5.2:25456455-25456474 | MS.gene44186:CDS | 50.0% | |
| GAGTGTGTTTCCCTTCAGGA+GGG | + | chr5.2:25460973-25460992 | MS.gene44186:intron | 50.0% | |
| GCAACTATGACAATGGTGGC+TGG | - | chr5.2:25461795-25461814 | None:intergenic | 50.0% | |
| GCTCTCAACACACTCACAAG+TGG | - | chr5.2:25457809-25457828 | None:intergenic | 50.0% | |
| GGCACTGTCCTTGTTCTCAT+GGG | + | chr5.2:25461859-25461878 | MS.gene44186:CDS | 50.0% | |
| GGGCTGAAGAGGATGAAAAG+TGG | - | chr5.2:25461762-25461781 | None:intergenic | 50.0% | |
| GGTGTGGTAGAAGTAGACCA+AGG | + | chr5.2:25460273-25460292 | MS.gene44186:intron | 50.0% | |
| GTAATTACCGGCCTTCCTGT+AGG | + | chr5.2:25461667-25461686 | MS.gene44186:intron | 50.0% | |
| GTGTACTGCTTGCACTTTGC+TGG | + | chr5.2:25461692-25461711 | MS.gene44186:CDS | 50.0% | |
| TCTACAGGAGCAACTCGAGT+TGG | + | chr5.2:25461913-25461932 | MS.gene44186:CDS | 50.0% | |
| TGAGAACGTAGGCTTGCATG+AGG | - | chr5.2:25461304-25461323 | None:intergenic | 50.0% | |
| TGGAGCTTTCCATCGGTCAA+TGG | - | chr5.2:25460528-25460547 | None:intergenic | 50.0% | |
| TGGCACTGTCCTTGTTCTCA+TGG | + | chr5.2:25461858-25461877 | MS.gene44186:CDS | 50.0% | |
| TGGTGGCTGGAACAAGAACA+GGG | - | chr5.2:25461782-25461801 | None:intergenic | 50.0% | |
| TTGGAACACTCCACTGGACT+GGG | + | chr5.2:25461726-25461745 | MS.gene44186:CDS | 50.0% | |
| TTTCCCTTCAGGAGGGGAAT+TGG | + | chr5.2:25460980-25460999 | MS.gene44186:intron | 50.0% | |
| TTTGCTGGACTCTCCCTTCT+TGG | + | chr5.2:25461707-25461726 | MS.gene44186:CDS | 50.0% | |
| ! | AACTCGAGTTGCTCCTGTAG+AGG | - | chr5.2:25461914-25461933 | None:intergenic | 50.0% |
| ! | CCAGTGGAGTGTTCCAAGAA+GGG | - | chr5.2:25461723-25461742 | None:intergenic | 50.0% |
| ! | GCATCTTCTAAAGGCAAGCG+AGG | + | chr5.2:25459378-25459397 | MS.gene44186:CDS | 50.0% |
| ! | GGCAGTGGTGTTAATGGTGA+TGG | + | chr5.2:25456501-25456520 | MS.gene44186:CDS | 50.0% |
| ! | GGGACGGAGGGAGTATAATT+TGG | + | chr5.2:25458857-25458876 | MS.gene44186:intron | 50.0% |
| ! | GTCTGTGTGTGATGATGAGG+TGG | - | chr5.2:25461402-25461421 | None:intergenic | 50.0% |
| ! | TCCAGTGGAGTGTTCCAAGA+AGG | - | chr5.2:25461724-25461743 | None:intergenic | 50.0% |
| ! | TGACCGCGAGAAGCTTTGTA+AGG | - | chr5.2:25460801-25460820 | None:intergenic | 50.0% |
| ! | TGTGTGATGATGAGGTGGGT+GGG | - | chr5.2:25461397-25461416 | None:intergenic | 50.0% |
| !! | AAGAGTGTCTCCCTTCAGGA+GGG | + | chr5.2:25459345-25459364 | MS.gene44186:intron | 50.0% |
| !! | ACAAGAGCACCATTGACCGA+TGG | + | chr5.2:25460516-25460535 | MS.gene44186:intron | 50.0% |
| !! | TAAGAGTGTCTCCCTTCAGG+AGG | + | chr5.2:25459344-25459363 | MS.gene44186:intron | 50.0% |
| !! | TGTCGCTGTCTTTTTGGCGT+CGG | + | chr5.2:25461820-25461839 | MS.gene44186:CDS | 50.0% |
| !!! | TTTTGGCGTCGGCAGCTTTT+GGG | + | chr5.2:25461831-25461850 | MS.gene44186:CDS | 50.0% |
| !!! | TTTTTGGCGTCGGCAGCTTT+TGG | + | chr5.2:25461830-25461849 | MS.gene44186:CDS | 50.0% |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.2:25457196-25457215 | MS.gene44186:intron | 55.0% | |
| ATTACCGGCCTTCCTGTAGG+CGG | + | chr5.2:25461670-25461689 | MS.gene44186:intron | 55.0% | |
| CACTGGTATCGTAACAGCGG+TGG | - | chr5.2:25461562-25461581 | None:intergenic | 55.0% | |
| CATCCAATGCCCCTCCTGAA+GGG | - | chr5.2:25459358-25459377 | None:intergenic | 55.0% | |
| CCATCCAATTCCCCTCCTGA+AGG | - | chr5.2:25460987-25461006 | None:intergenic | 55.0% | |
| CCCTTCTTGGAACACTCCAC+TGG | + | chr5.2:25461720-25461739 | MS.gene44186:CDS | 55.0% | |
| CCTTCAGGAGGGGAATTGGA+TGG | + | chr5.2:25460984-25461003 | MS.gene44186:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.2:25457203-25457222 | MS.gene44186:intron | 55.0% | |
| CTGTAGAGGCCCTTGATCCT+GGG | - | chr5.2:25461900-25461919 | None:intergenic | 55.0% | |
| CTTGGAACACTCCACTGGAC+TGG | + | chr5.2:25461725-25461744 | MS.gene44186:CDS | 55.0% | |
| GCGTCTCTGCAACATCAGCA+GGG | - | chr5.2:25461159-25461178 | None:intergenic | 55.0% | |
| GGCTTATCTTTCGGCGGATC+CGG | - | chr5.2:25456606-25456625 | None:intergenic | 55.0% | |
| GGTTGCGCCTACACGTGAAT+TGG | + | chr5.2:25457739-25457758 | MS.gene44186:intron | 55.0% | |
| TGCGTCTCTGCAACAACAGC+AGG | - | chr5.2:25459528-25459547 | None:intergenic | 55.0% | |
| TGCGTCTCTGCAACATCAGC+AGG | - | chr5.2:25461160-25461179 | None:intergenic | 55.0% | |
| TGGAACACTCCACTGGACTG+GGG | + | chr5.2:25461727-25461746 | MS.gene44186:CDS | 55.0% | |
| TGTAGAGGCCCTTGATCCTG+GGG | - | chr5.2:25461899-25461918 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.2:25457197-25457216 | MS.gene44186:intron | 55.0% | |
| ! | ACAGCTTATGGTGGAGTGGG+TGG | + | chr5.2:25461939-25461958 | MS.gene44186:CDS | 55.0% |
| ! | AGAGTGTCTCCCTTCAGGAG+GGG | + | chr5.2:25459346-25459365 | MS.gene44186:intron | 55.0% |
| ! | CTTATGGTGGAGTGGGTGGT+CGG | + | chr5.2:25461943-25461962 | MS.gene44186:CDS | 55.0% |
| ! | GTGTGTGATGATGAGGTGGG+TGG | - | chr5.2:25461398-25461417 | None:intergenic | 55.0% |
| ! | TTATGGTGGAGTGGGTGGTC+GGG | + | chr5.2:25461944-25461963 | MS.gene44186:CDS | 55.0% |
| CACACCTTCGGCCACGTGAA+AGG | - | chr5.2:25460259-25460278 | None:intergenic | 60.0% | |
| CCAGGATCAAGGGCCTCTAC+AGG | + | chr5.2:25461898-25461917 | MS.gene44186:CDS | 60.0% | |
| CCATCCAATGCCCCTCCTGA+AGG | - | chr5.2:25459359-25459378 | None:intergenic | 60.0% | |
| CCTGTAGAGGCCCTTGATCC+TGG | - | chr5.2:25461901-25461920 | None:intergenic | 60.0% | |
| CTTTCACGTGGCCGAAGGTG+TGG | + | chr5.2:25460257-25460276 | MS.gene44186:intron | 60.0% | |
| GCAAGCAGTACACCGCCTAC+AGG | - | chr5.2:25461685-25461704 | None:intergenic | 60.0% | |
| GCAGTACACCGCCTACAGGA+AGG | - | chr5.2:25461681-25461700 | None:intergenic | 60.0% | |
| GGTACCTTTCACGTGGCCGA+AGG | + | chr5.2:25460252-25460271 | MS.gene44186:intron | 60.0% | |
| GGTATCGTAACAGCGGTGGG+TGG | - | chr5.2:25461558-25461577 | None:intergenic | 60.0% | |
| TACACCGCCTACAGGAAGGC+CGG | - | chr5.2:25461677-25461696 | None:intergenic | 60.0% | |
| ! | GCTTGTTACCCCCAGTCCAG+TGG | - | chr5.2:25461739-25461758 | None:intergenic | 60.0% |
| ! | GGAACACTCCACTGGACTGG+GGG | + | chr5.2:25461728-25461747 | MS.gene44186:CDS | 60.0% |
| ! | GTCGGCAGCTTTTGGGCTGA+TGG | + | chr5.2:25461838-25461857 | MS.gene44186:CDS | 60.0% |
| ! | TCTCCCTTCAGGAGGGGCAT+TGG | + | chr5.2:25459352-25459371 | MS.gene44186:intron | 60.0% |
| !! | CCTTCAGGAGGGGCATTGGA+TGG | + | chr5.2:25459356-25459375 | MS.gene44186:intron | 60.0% |
| TCTTTCGGCGGATCCGGCGA+CGG | - | chr5.2:25456600-25456619 | None:intergenic | 65.0% | |
| GTGGAGTGGGTGGTCGGGAG+TGG | + | chr5.2:25461949-25461968 | MS.gene44186:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 25456330 | 25461976 | 25456330 | ID=MS.gene44186 |
| chr5.2 | mRNA | 25456330 | 25461976 | 25456330 | ID=MS.gene44186.t1;Parent=MS.gene44186 |
| chr5.2 | exon | 25456330 | 25456664 | 25456330 | ID=MS.gene44186.t1.exon1;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25456330 | 25456664 | 25456330 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| chr5.2 | exon | 25459363 | 25459580 | 25459363 | ID=MS.gene44186.t1.exon2;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25459363 | 25459580 | 25459363 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| chr5.2 | exon | 25459778 | 25459832 | 25459778 | ID=MS.gene44186.t1.exon3;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25459778 | 25459832 | 25459778 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| chr5.2 | exon | 25460991 | 25461060 | 25460991 | ID=MS.gene44186.t1.exon4;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25460991 | 25461060 | 25460991 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| chr5.2 | exon | 25461148 | 25461210 | 25461148 | ID=MS.gene44186.t1.exon5;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25461148 | 25461210 | 25461148 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| chr5.2 | exon | 25461689 | 25461976 | 25461689 | ID=MS.gene44186.t1.exon6;Parent=MS.gene44186.t1 |
| chr5.2 | CDS | 25461689 | 25461976 | 25461689 | ID=cds.MS.gene44186.t1;Parent=MS.gene44186.t1 |
| Gene Sequence |
| Protein sequence |
