Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44444.t1 | XP_003608551.2 | 87.9 | 323 | 37 | 1 | 1 | 323 | 170 | 490 | 3.30E-158 | 567.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44444.t1 | Q9FHP1 | 44.3 | 327 | 171 | 6 | 2 | 321 | 155 | 477 | 1.3e-65 | 251.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44444.t1 | G7JF79 | 87.9 | 323 | 37 | 1 | 1 | 323 | 170 | 490 | 2.4e-158 | 567.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060861 | MS.gene44444 | 0.937079 | 6.20E-98 | -1.69E-46 |
| MS.gene060864 | MS.gene44444 | 0.936692 | 1.16E-97 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44444.t1 | MTR_4g097380 | 87.926 | 323 | 37 | 1 | 1 | 323 | 170 | 490 | 0.0 | 568 |
| MS.gene44444.t1 | MTR_5g015170 | 50.904 | 332 | 151 | 3 | 1 | 323 | 158 | 486 | 5.92e-113 | 336 |
| MS.gene44444.t1 | MTR_7g028050 | 37.771 | 323 | 179 | 6 | 2 | 323 | 36 | 337 | 6.35e-63 | 203 |
| MS.gene44444.t1 | MTR_7g028050 | 37.771 | 323 | 179 | 6 | 2 | 323 | 139 | 440 | 1.09e-61 | 202 |
| MS.gene44444.t1 | MTR_3g088885 | 38.182 | 275 | 158 | 5 | 3 | 276 | 152 | 415 | 1.44e-60 | 200 |
| MS.gene44444.t1 | MTR_7g022470 | 35.714 | 322 | 187 | 6 | 2 | 323 | 148 | 449 | 1.14e-59 | 197 |
| MS.gene44444.t1 | MTR_1g029520 | 37.956 | 274 | 160 | 4 | 5 | 276 | 384 | 649 | 1.35e-59 | 202 |
| MS.gene44444.t1 | MTR_5g011580 | 37.500 | 272 | 154 | 4 | 2 | 273 | 136 | 391 | 2.17e-58 | 194 |
| MS.gene44444.t1 | MTR_5g047260 | 39.590 | 293 | 157 | 7 | 2 | 290 | 154 | 430 | 3.12e-57 | 191 |
| MS.gene44444.t1 | MTR_4g101950 | 34.444 | 270 | 161 | 4 | 2 | 271 | 136 | 389 | 1.26e-49 | 171 |
| MS.gene44444.t1 | MTR_5g047260 | 40.271 | 221 | 110 | 8 | 2 | 216 | 154 | 358 | 4.19e-37 | 136 |
| MS.gene44444.t1 | MTR_5g047260 | 39.412 | 170 | 88 | 5 | 2 | 170 | 154 | 309 | 6.95e-29 | 113 |
| MS.gene44444.t1 | MTR_1g012740 | 34.400 | 125 | 73 | 3 | 111 | 234 | 27 | 143 | 5.37e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44444.t1 | AT5G65890 | 44.343 | 327 | 171 | 6 | 2 | 321 | 41 | 363 | 2.07e-83 | 256 |
| MS.gene44444.t1 | AT5G65890 | 44.343 | 327 | 171 | 6 | 2 | 321 | 103 | 425 | 1.43e-82 | 256 |
| MS.gene44444.t1 | AT5G65890 | 44.343 | 327 | 171 | 6 | 2 | 321 | 103 | 425 | 1.43e-82 | 256 |
| MS.gene44444.t1 | AT5G65890 | 44.343 | 327 | 171 | 6 | 2 | 321 | 155 | 477 | 8.86e-82 | 256 |
| MS.gene44444.t1 | AT5G65890 | 44.343 | 327 | 171 | 6 | 2 | 321 | 155 | 477 | 8.86e-82 | 256 |
| MS.gene44444.t1 | AT1G76990 | 40.072 | 277 | 151 | 4 | 2 | 276 | 151 | 414 | 2.56e-63 | 207 |
| MS.gene44444.t1 | AT1G76990 | 40.072 | 277 | 151 | 4 | 2 | 276 | 151 | 414 | 2.56e-63 | 207 |
| MS.gene44444.t1 | AT1G76990 | 40.072 | 277 | 151 | 4 | 2 | 276 | 151 | 414 | 2.56e-63 | 207 |
| MS.gene44444.t1 | AT1G76990 | 40.072 | 277 | 151 | 4 | 2 | 276 | 151 | 414 | 2.56e-63 | 207 |
| MS.gene44444.t1 | AT1G76990 | 40.072 | 277 | 151 | 4 | 2 | 276 | 151 | 414 | 2.56e-63 | 207 |
| MS.gene44444.t1 | AT1G69040 | 37.231 | 325 | 180 | 9 | 3 | 323 | 145 | 449 | 4.65e-58 | 194 |
| MS.gene44444.t1 | AT1G69040 | 37.231 | 325 | 180 | 9 | 3 | 323 | 149 | 453 | 4.93e-58 | 194 |
| MS.gene44444.t1 | AT1G12420 | 34.877 | 324 | 189 | 6 | 2 | 323 | 64 | 367 | 5.35e-58 | 191 |
| MS.gene44444.t1 | AT1G12420 | 34.877 | 324 | 189 | 6 | 2 | 323 | 136 | 439 | 3.00e-57 | 191 |
| MS.gene44444.t1 | AT5G25320 | 34.006 | 347 | 200 | 7 | 2 | 322 | 118 | 461 | 9.01e-57 | 191 |
| MS.gene44444.t1 | AT4G22780 | 38.686 | 274 | 144 | 6 | 2 | 271 | 136 | 389 | 2.04e-56 | 189 |
| MS.gene44444.t1 | AT4G22780 | 38.686 | 274 | 144 | 6 | 2 | 271 | 136 | 389 | 2.04e-56 | 189 |
| MS.gene44444.t1 | AT5G25320 | 34.006 | 347 | 200 | 7 | 2 | 322 | 157 | 500 | 3.64e-56 | 190 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 141 | 395 | 2.26e-55 | 186 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 141 | 395 | 2.26e-55 | 186 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 141 | 395 | 2.65e-55 | 186 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 155 | 409 | 2.77e-55 | 186 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 155 | 409 | 2.96e-55 | 186 |
| MS.gene44444.t1 | AT3G01990 | 39.051 | 274 | 146 | 5 | 2 | 273 | 155 | 409 | 2.96e-55 | 186 |
| MS.gene44444.t1 | AT2G03730 | 35.494 | 324 | 191 | 7 | 1 | 323 | 150 | 456 | 5.40e-53 | 180 |
| MS.gene44444.t1 | AT2G03730 | 35.494 | 324 | 191 | 7 | 1 | 323 | 150 | 456 | 5.40e-53 | 180 |
| MS.gene44444.t1 | AT3G01990 | 38.725 | 204 | 104 | 5 | 2 | 203 | 155 | 339 | 7.17e-35 | 130 |
| MS.gene44444.t1 | AT3G01990 | 38.725 | 204 | 104 | 5 | 2 | 203 | 155 | 339 | 8.49e-35 | 130 |
| MS.gene44444.t1 | AT3G01990 | 38.725 | 204 | 104 | 5 | 2 | 203 | 141 | 325 | 1.04e-34 | 129 |
| MS.gene44444.t1 | AT5G25320 | 36.364 | 220 | 119 | 5 | 2 | 203 | 157 | 373 | 3.05e-32 | 124 |
| MS.gene44444.t1 | AT3G01990 | 37.725 | 167 | 85 | 4 | 2 | 166 | 155 | 304 | 1.86e-25 | 104 |
| MS.gene44444.t1 | AT3G01990 | 37.725 | 167 | 85 | 4 | 2 | 166 | 141 | 290 | 1.98e-25 | 103 |
Find 0 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAATTGAAAAATC+TGG | - | 32967:26953-26972 | None:intergenic | 10.0% |
| !! | AATACTCTAATTTAAAAACA+GGG | - | 32967:27409-27428 | None:intergenic | 15.0% |
| !! | ATCAAAACCTAATTTAAATA+TGG | - | 32967:27215-27234 | None:intergenic | 15.0% |
| !! | GTTAAGATTAATAATAGTAT+CGG | - | 32967:27637-27656 | None:intergenic | 15.0% |
| !!! | ATGATGATGAATTAATATTT+TGG | - | 32967:27284-27303 | None:intergenic | 15.0% |
| !!! | TTTTCAATTAATTATTTGCA+AGG | + | 32967:26956-26975 | MS.gene44444:intron | 15.0% |
| !! | AAAAAAAGTAACCAAGTTAT+TGG | + | 32967:27108-27127 | MS.gene44444:intron | 20.0% |
| !! | AAACCTAATTTAAATATGGT+TGG | - | 32967:27211-27230 | None:intergenic | 20.0% |
| !! | AACCTAATTTAAATATGGTT+GGG | - | 32967:27210-27229 | None:intergenic | 20.0% |
| !! | ATACTCTAATTTAAAAACAG+GGG | - | 32967:27408-27427 | None:intergenic | 20.0% |
| !! | CAATACTCTAATTTAAAAAC+AGG | - | 32967:27410-27429 | None:intergenic | 20.0% |
| !!! | GAATAGACTTTAAAATGATA+AGG | + | 32967:27065-27084 | MS.gene44444:intron | 20.0% |
| ! | ACAATATCAAACAACAACTT+AGG | - | 32967:26852-26871 | None:intergenic | 25.0% |
| ! | ATCACTATTCAATTAATGTG+TGG | + | 32967:27032-27051 | MS.gene44444:intron | 25.0% |
| ! | TAATTTAAATATGGTTGGGA+GGG | - | 32967:27206-27225 | None:intergenic | 25.0% |
| ! | TCTATAACAAGAATTGAGTT+TGG | + | 32967:27801-27820 | MS.gene44444:CDS | 25.0% |
| ! | TTAAAGTCTATTCATGTTTG+TGG | - | 32967:27058-27077 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGAGAAATTGG+TGG | + | 32967:27903-27922 | MS.gene44444:CDS | 25.0% |
| !! | ATATTGGTGCAATTTTTATG+TGG | + | 32967:26988-27007 | MS.gene44444:intron | 25.0% |
| !! | GATTATATTTAGAACTACCT+TGG | - | 32967:27476-27495 | None:intergenic | 25.0% |
| !! | TTGGATTTTTGCATTTACAA+TGG | + | 32967:27604-27623 | MS.gene44444:intron | 25.0% |
| !!! | GAGTTGATAAAAAGAGAAAT+TGG | + | 32967:27900-27919 | MS.gene44444:CDS | 25.0% |
| AACATCTCTACTATTGTTAC+TGG | - | 32967:27982-28001 | None:intergenic | 30.0% | |
| AATTTAAATATGGTTGGGAG+GGG | - | 32967:27205-27224 | None:intergenic | 30.0% | |
| ATTAGCACTCAAAACAAAAC+GGG | + | 32967:27735-27754 | MS.gene44444:CDS | 30.0% | |
| CATTAGCACTCAAAACAAAA+CGG | + | 32967:27734-27753 | MS.gene44444:CDS | 30.0% | |
| CTAATTTAAATATGGTTGGG+AGG | - | 32967:27207-27226 | None:intergenic | 30.0% | |
| CTCCCAACCATATTTAAATT+AGG | + | 32967:27205-27224 | MS.gene44444:intron | 30.0% | |
| GGTTCACAATTCTCTTTATA+TGG | + | 32967:27938-27957 | MS.gene44444:CDS | 30.0% | |
| TATAGCAGCGATTAAACATA+AGG | - | 32967:27529-27548 | None:intergenic | 30.0% | |
| TGCAAGGACAAAAGATATAT+TGG | + | 32967:26972-26991 | MS.gene44444:intron | 30.0% | |
| TTCTATGTTACAGATTGTTC+AGG | + | 32967:27852-27871 | MS.gene44444:CDS | 30.0% | |
| ! | AGATTAGTCATCGCAAATAT+TGG | - | 32967:27147-27166 | None:intergenic | 30.0% |
| !! | GTTATACCAACTTTTGCTAT+TGG | + | 32967:27999-28018 | MS.gene44444:CDS | 30.0% |
| !! | TTACACAGGAGTACTTTATA+AGG | + | 32967:27448-27467 | MS.gene44444:intron | 30.0% |
| ACAACAAAACCGAAAAGCAA+AGG | + | 32967:27499-27518 | MS.gene44444:CDS | 35.0% | |
| AGTTGCATGCATTATCTATC+CGG | + | 32967:26500-26519 | MS.gene44444:CDS | 35.0% | |
| ATGCTTCCAATAGCAAAAGT+TGG | - | 32967:28008-28027 | None:intergenic | 35.0% | |
| CAATGTATCATGTGTTACAC+AGG | + | 32967:27434-27453 | MS.gene44444:intron | 35.0% | |
| GAGTACTTTATAAGGAACCA+AGG | + | 32967:27456-27475 | MS.gene44444:CDS | 35.0% | |
| GTATCTATCCACTGAAACAT+GGG | - | 32967:26784-26803 | None:intergenic | 35.0% | |
| TATTGCATTGCAATGTTGCA+GGG | + | 32967:27699-27718 | MS.gene44444:intron | 35.0% | |
| TCCAATAACAAAAGCCTTCA+AGG | - | 32967:27589-27608 | None:intergenic | 35.0% | |
| TTAGCACTCAAAACAAAACG+GGG | + | 32967:27736-27755 | MS.gene44444:CDS | 35.0% | |
| TTAGTCATCGCAAATATTGG+TGG | - | 32967:27144-27163 | None:intergenic | 35.0% | |
| TTATTGCATTGCAATGTTGC+AGG | + | 32967:27698-27717 | MS.gene44444:intron | 35.0% | |
| TTTGCATTTACAATGGTTCC+TGG | + | 32967:27611-27630 | MS.gene44444:intron | 35.0% | |
| ! | AAGAATTGAGTTTGGAGTAG+AGG | + | 32967:27809-27828 | MS.gene44444:CDS | 35.0% |
| ! | TTGCTATTGGAAGCATGATT+TGG | + | 32967:28012-28031 | MS.gene44444:CDS | 35.0% |
| !! | ACCTTGAAGGCTTTTGTTAT+TGG | + | 32967:27585-27604 | MS.gene44444:intron | 35.0% |
| !! | GATTAATAATAGTATCGGCC+AGG | - | 32967:27632-27651 | None:intergenic | 35.0% |
| AATCGCTCTCTATCGTTGAT+TGG | - | 32967:26546-26565 | None:intergenic | 40.0% | |
| AATGTGATAGAGGCCAATGA+AGG | + | 32967:26591-26610 | MS.gene44444:CDS | 40.0% | |
| ACACGCGTAATTCATGAGAA+TGG | + | 32967:27774-27793 | MS.gene44444:CDS | 40.0% | |
| ACATCATATCTGCAAAAGCC+TGG | + | 32967:26463-26482 | MS.gene44444:CDS | 40.0% | |
| ACTATTGTTACTGGATGACG+AGG | - | 32967:27973-27992 | None:intergenic | 40.0% | |
| AGCCTTCAAGGTATGAATCA+TGG | - | 32967:27577-27596 | None:intergenic | 40.0% | |
| AGCGTCTCATCAACAATTTC+AGG | + | 32967:28045-28064 | MS.gene44444:CDS | 40.0% | |
| ATGTTAAAAAGCTCCACCAC+CGG | + | 32967:26642-26661 | MS.gene44444:CDS | 40.0% | |
| CGTATCTATCCACTGAAACA+TGG | - | 32967:26785-26804 | None:intergenic | 40.0% | |
| GCATGCAACTTTGTCATGAT+GGG | - | 32967:26490-26509 | None:intergenic | 40.0% | |
| GCCTTCAAGGTATGAATCAT+GGG | - | 32967:27576-27595 | None:intergenic | 40.0% | |
| GTAGAGGATGAAACAGCAAT+AGG | + | 32967:27825-27844 | MS.gene44444:CDS | 40.0% | |
| GTTTCAGTGGATAGATACGA+GGG | + | 32967:26786-26805 | MS.gene44444:CDS | 40.0% | |
| TCCCATGATTCATACCTTGA+AGG | + | 32967:27572-27591 | MS.gene44444:intron | 40.0% | |
| TGCAATGTTGCAGGGATTAA+AGG | + | 32967:27707-27726 | MS.gene44444:intron | 40.0% | |
| TGCATGCAACTTTGTCATGA+TGG | - | 32967:26491-26510 | None:intergenic | 40.0% | |
| TGTTACAGATTGTTCAGGTC+AGG | + | 32967:27857-27876 | MS.gene44444:CDS | 40.0% | |
| TGTTTCAGTGGATAGATACG+AGG | + | 32967:26785-26804 | MS.gene44444:CDS | 40.0% | |
| TTTCAGTGGATAGATACGAG+GGG | + | 32967:26787-26806 | MS.gene44444:CDS | 40.0% | |
| ! | AATTGGTGGTTCAGTTGCTT+TGG | + | 32967:27917-27936 | MS.gene44444:CDS | 40.0% |
| ! | GCAATATGAGGTGTTTCATG+CGG | + | 32967:26890-26909 | MS.gene44444:CDS | 40.0% |
| !! | TAAGGTGAGCCTTTGCTTTT+CGG | - | 32967:27511-27530 | None:intergenic | 40.0% |
| ACAACAACTTAGGACGATCC+CGG | - | 32967:26842-26861 | None:intergenic | 45.0% | |
| AGCACAAAAGGCGGTATGAT+GGG | + | 32967:26757-26776 | MS.gene44444:CDS | 45.0% | |
| ATAATGGCGGTGAGCACAAA+AGG | + | 32967:26745-26764 | MS.gene44444:CDS | 45.0% | |
| ATAGAGGCCAATGAAGGAAG+GGG | + | 32967:26597-26616 | MS.gene44444:CDS | 45.0% | |
| ATGACAACTCTCGTAGTCAC+CGG | - | 32967:26712-26731 | None:intergenic | 45.0% | |
| CAAAACGGGGATACTATCGA+AGG | + | 32967:27749-27768 | MS.gene44444:CDS | 45.0% | |
| GAAGGGGAGAGAAAGATATG+AGG | + | 32967:26613-26632 | MS.gene44444:CDS | 45.0% | |
| GACACTTCGCACCAATAACT+TGG | - | 32967:27122-27141 | None:intergenic | 45.0% | |
| GATAGAGGCCAATGAAGGAA+GGG | + | 32967:26596-26615 | MS.gene44444:CDS | 45.0% | |
| GCTCACAGACATGCAATATG+AGG | + | 32967:26878-26897 | MS.gene44444:CDS | 45.0% | |
| TCAGATCCGGAATGTGATAG+AGG | + | 32967:26581-26600 | MS.gene44444:CDS | 45.0% | |
| TGATAGAGGCCAATGAAGGA+AGG | + | 32967:26595-26614 | MS.gene44444:CDS | 45.0% | |
| TGCATGCATTATCTATCCGG+AGG | + | 32967:26503-26522 | MS.gene44444:CDS | 45.0% | |
| TTAAATATGGTTGGGAGGGG+AGG | - | 32967:27202-27221 | None:intergenic | 45.0% | |
| TTTCTCTCCCCTTCCTTCAT+TGG | - | 32967:26607-26626 | None:intergenic | 45.0% | |
| ! | AATTGTTGATGAGACGCTCG+AGG | - | 32967:28043-28062 | None:intergenic | 45.0% |
| ! | CATTGGCCTCTATCACATTC+CGG | - | 32967:26590-26609 | None:intergenic | 45.0% |
| !! | AACTTTGTCATGATGGGTCC+AGG | - | 32967:26484-26503 | None:intergenic | 45.0% |
| !! | TTAATATAAATTGTATTAAT+TGG | - | 32967:27380-27399 | None:intergenic | 5.0% |
| CTCTGCAGAGGAATCTGACA+GGG | + | 32967:27165-27184 | MS.gene44444:intron | 50.0% | |
| GAGCACAAAAGGCGGTATGA+TGG | + | 32967:26756-26775 | MS.gene44444:CDS | 50.0% | |
| GCACAAAAGGCGGTATGATG+GGG | + | 32967:26758-26777 | MS.gene44444:CDS | 50.0% | |
| GCGATGACTAATCTCTGCAG+AGG | + | 32967:27153-27172 | MS.gene44444:intron | 50.0% | |
| TCTCTGCAGAGGAATCTGAC+AGG | + | 32967:27164-27183 | MS.gene44444:intron | 50.0% | |
| TGTTACCTCAAACAGCCCCA+TGG | + | 32967:26914-26933 | MS.gene44444:CDS | 50.0% | |
| ! | TCTCTATCGTTGATTGGCCC+AGG | - | 32967:26540-26559 | None:intergenic | 50.0% |
| ! | TGGAGTACCTGTTCTGCCAT+GGG | - | 32967:26933-26952 | None:intergenic | 50.0% |
| AAACAGCCCCATGGCAGAAC+AGG | + | 32967:26923-26942 | MS.gene44444:CDS | 55.0% | |
| AGAGTTGTCATGCCTGCCAC+GGG | + | 32967:26721-26740 | MS.gene44444:CDS | 55.0% | |
| ATGGCGGTGAGCACAAAAGG+CGG | + | 32967:26748-26767 | MS.gene44444:CDS | 55.0% | |
| CACCAGATGATGTACGCAGC+CGG | + | 32967:26690-26709 | MS.gene44444:CDS | 55.0% | |
| CCCAAGTCGTGGATCAGATC+CGG | + | 32967:26568-26587 | MS.gene44444:CDS | 55.0% | |
| CCGGATCTGATCCACGACTT+GGG | - | 32967:26571-26590 | None:intergenic | 55.0% | |
| CCGGTCACAGTCATACCGAA+CGG | + | 32967:26661-26680 | MS.gene44444:CDS | 55.0% | |
| CCGTTCGGTATGACTGTGAC+CGG | - | 32967:26664-26683 | None:intergenic | 55.0% | |
| GAGAGTTGTCATGCCTGCCA+CGG | + | 32967:26720-26739 | MS.gene44444:CDS | 55.0% | |
| GATACGAGGGGCGAGATTAC+TGG | + | 32967:26799-26818 | MS.gene44444:CDS | 55.0% | |
| GGTCGGTGAATGTGAGAAGC+CGG | + | 32967:26820-26839 | MS.gene44444:CDS | 55.0% | |
| GTCACAGTCATACCGAACGG+AGG | + | 32967:26664-26683 | MS.gene44444:CDS | 55.0% | |
| GTCGGTGAATGTGAGAAGCC+GGG | + | 32967:26821-26840 | MS.gene44444:CDS | 55.0% | |
| TCCGGATCTGATCCACGACT+TGG | - | 32967:26572-26591 | None:intergenic | 55.0% | |
| TGATGGGGCCCATGTTTCAG+TGG | + | 32967:26773-26792 | MS.gene44444:CDS | 55.0% | |
| TTCGGTATGACTGTGACCGG+TGG | - | 32967:26661-26680 | None:intergenic | 55.0% | |
| TTCTGCCATGGGGCTGTTTG+AGG | - | 32967:26922-26941 | None:intergenic | 55.0% | |
| ! | AGAGCGATTAGCCCAAGTCG+TGG | + | 32967:26557-26576 | MS.gene44444:CDS | 55.0% |
| ! | ATCGTTGATTGGCCCAGGTC+TGG | - | 32967:26535-26554 | None:intergenic | 55.0% |
| ! | CTGGAGTACCTGTTCTGCCA+TGG | - | 32967:26934-26953 | None:intergenic | 55.0% |
| ! | GGAGTACCTGTTCTGCCATG+GGG | - | 32967:26932-26951 | None:intergenic | 55.0% |
| CATCTGGTGGAGCCTCCGTT+CGG | - | 32967:26679-26698 | None:intergenic | 60.0% | |
| CATGCCTGCCACGGGGATAA+TGG | + | 32967:26729-26748 | MS.gene44444:CDS | 60.0% | |
| CCAGGTCTGGATGCATCCTC+CGG | - | 32967:26522-26541 | None:intergenic | 60.0% | |
| CGAGGGGCGAGATTACTGGT+CGG | + | 32967:26803-26822 | MS.gene44444:CDS | 60.0% | |
| CGGAGGATGCATCCAGACCT+GGG | + | 32967:26520-26539 | MS.gene44444:CDS | 60.0% | |
| CGGCTGCGTACATCATCTGG+TGG | - | 32967:26692-26711 | None:intergenic | 60.0% | |
| GAGTTGTCATGCCTGCCACG+GGG | + | 32967:26722-26741 | MS.gene44444:CDS | 60.0% | |
| GGTATGACTGTGACCGGTGG+TGG | - | 32967:26658-26677 | None:intergenic | 60.0% | |
| GGTTGGGAGGGGAGGACTAA+AGG | - | 32967:27194-27213 | None:intergenic | 60.0% | |
| ! | CACCGGCTGCGTACATCATC+TGG | - | 32967:26695-26714 | None:intergenic | 60.0% |
| ACCGCCATTATCCCCGTGGC+AGG | - | 32967:26736-26755 | None:intergenic | 65.0% | |
| CCGGAGGATGCATCCAGACC+TGG | + | 32967:26519-26538 | MS.gene44444:CDS | 65.0% | |
| GCTCACCGCCATTATCCCCG+TGG | - | 32967:26740-26759 | None:intergenic | 65.0% | |
| ! | GCCTGCCACGGGGATAATGG+CGG | + | 32967:26732-26751 | MS.gene44444:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32967 | gene | 26447 | 28082 | 26447 | ID=MS.gene44444 |
| 32967 | mRNA | 26447 | 28082 | 26447 | ID=MS.gene44444.t1;Parent=MS.gene44444 |
| 32967 | exon | 26447 | 26944 | 26447 | ID=MS.gene44444.t1.exon1;Parent=MS.gene44444.t1 |
| 32967 | CDS | 26447 | 26944 | 26447 | ID=cds.MS.gene44444.t1;Parent=MS.gene44444.t1 |
| 32967 | exon | 27456 | 27566 | 27456 | ID=MS.gene44444.t1.exon2;Parent=MS.gene44444.t1 |
| 32967 | CDS | 27456 | 27566 | 27456 | ID=cds.MS.gene44444.t1;Parent=MS.gene44444.t1 |
| 32967 | exon | 27720 | 28082 | 27720 | ID=MS.gene44444.t1.exon3;Parent=MS.gene44444.t1 |
| 32967 | CDS | 27720 | 28082 | 27720 | ID=cds.MS.gene44444.t1;Parent=MS.gene44444.t1 |
| Gene Sequence |
| Protein sequence |
