Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060861.t1 | XP_003608551.2 | 90.2 | 489 | 46 | 1 | 15 | 503 | 4 | 490 | 2.20E-254 | 887.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060861.t1 | Q9FHP1 | 47.8 | 483 | 234 | 9 | 30 | 501 | 2 | 477 | 5.6e-113 | 409.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060861.t1 | G7JF79 | 90.2 | 489 | 46 | 1 | 15 | 503 | 4 | 490 | 1.6e-254 | 887.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060861 | MS.gene060864 | 0.998285 | 8.17E-261 | -1.69E-46 |
| MS.gene060861 | MS.gene44444 | 0.937079 | 6.20E-98 | -1.69E-46 |
| MS.gene060861 | MS.gene44446 | 0.93695 | 7.63E-98 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAATTGAAAAATC+TGG | + | 32969:16009-16028 | None:intergenic | 10.0% |
| !! | AATTAAGTAAAGTTAAATTA+AGG | + | 32969:14797-14816 | None:intergenic | 10.0% |
| !! | AATACTCTAATTTAAAAACA+GGG | + | 32969:16465-16484 | None:intergenic | 15.0% |
| !! | ATCAAAACCTAATTTAAATA+TGG | + | 32969:16271-16290 | None:intergenic | 15.0% |
| !! | GTTAAGATTAATAATAGTAT+CGG | + | 32969:16693-16712 | None:intergenic | 15.0% |
| !!! | ATGATGATGAATTAATATTT+TGG | + | 32969:16340-16359 | None:intergenic | 15.0% |
| !!! | TTTTCAATTAATTATTTGCA+AGG | - | 32969:16012-16031 | MS.gene060861:CDS | 15.0% |
| !! | AAAAAAAGTAACCAAGTTAT+TGG | - | 32969:16164-16183 | MS.gene060861:CDS | 20.0% |
| !! | AAACCTAATTTAAATATGGT+TGG | + | 32969:16267-16286 | None:intergenic | 20.0% |
| !! | AACCTAATTTAAATATGGTT+GGG | + | 32969:16266-16285 | None:intergenic | 20.0% |
| !! | ATACTCTAATTTAAAAACAG+GGG | + | 32969:16464-16483 | None:intergenic | 20.0% |
| !! | CAATACTCTAATTTAAAAAC+AGG | + | 32969:16466-16485 | None:intergenic | 20.0% |
| !!! | AAATAGTGCATATCTTTTTT+GGG | + | 32969:14628-14647 | None:intergenic | 20.0% |
| !!! | GAATAGACTTTAAAATGATA+AGG | - | 32969:16121-16140 | MS.gene060861:CDS | 20.0% |
| !!! | TGCAATTCTAAGATTATTTT+TGG | - | 32969:15040-15059 | MS.gene060861:intron | 20.0% |
| ! | AAATCATACATTTCTTCTGA+TGG | - | 32969:14952-14971 | MS.gene060861:CDS | 25.0% |
| ! | ACAATATCAAACAACAACTT+AGG | + | 32969:15908-15927 | None:intergenic | 25.0% |
| ! | ATATATGAAACAAGAAACAC+GGG | + | 32969:14701-14720 | None:intergenic | 25.0% |
| ! | ATCACTATTCAATTAATGTG+TGG | - | 32969:16088-16107 | MS.gene060861:CDS | 25.0% |
| ! | ATCAGAAGAAATGTATGATT+TGG | + | 32969:14953-14972 | None:intergenic | 25.0% |
| ! | CATATATGAAACAAGAAACA+CGG | + | 32969:14702-14721 | None:intergenic | 25.0% |
| ! | TAATTTAAATATGGTTGGGA+GGG | + | 32969:16262-16281 | None:intergenic | 25.0% |
| ! | TCTATAACAAGAATTGAGTT+TGG | - | 32969:16857-16876 | MS.gene060861:intron | 25.0% |
| ! | TGTACACATTGTTTATATTG+AGG | + | 32969:15015-15034 | None:intergenic | 25.0% |
| ! | TTAAAGTCTATTCATGTTTG+TGG | + | 32969:16114-16133 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGAGAAATTGG+TGG | - | 32969:16959-16978 | MS.gene060861:intron | 25.0% |
| !! | ATATTGGTGCAATTTTTATG+TGG | - | 32969:16044-16063 | MS.gene060861:CDS | 25.0% |
| !! | GATTATATTTAGAACTACCT+TGG | + | 32969:16532-16551 | None:intergenic | 25.0% |
| !! | TGTATGATTTGGAAATTGTA+AGG | + | 32969:14942-14961 | None:intergenic | 25.0% |
| !! | TTGGATTTTTGCATTTACAA+TGG | - | 32969:16660-16679 | MS.gene060861:intron | 25.0% |
| !!! | CAAATAGTGCATATCTTTTT+TGG | + | 32969:14629-14648 | None:intergenic | 25.0% |
| !!! | GAGTTGATAAAAAGAGAAAT+TGG | - | 32969:16956-16975 | MS.gene060861:intron | 25.0% |
| AACATCTCTACTATTGTTAC+TGG | + | 32969:17038-17057 | None:intergenic | 30.0% | |
| AATTTAAATATGGTTGGGAG+GGG | + | 32969:16261-16280 | None:intergenic | 30.0% | |
| ACAAACTTAGTATAGTACCT+AGG | + | 32969:14565-14584 | None:intergenic | 30.0% | |
| ATTAGCACTCAAAACAAAAC+GGG | - | 32969:16791-16810 | MS.gene060861:CDS | 30.0% | |
| CATTAGCACTCAAAACAAAA+CGG | - | 32969:16790-16809 | MS.gene060861:CDS | 30.0% | |
| CTAATTTAAATATGGTTGGG+AGG | + | 32969:16263-16282 | None:intergenic | 30.0% | |
| CTCCCAACCATATTTAAATT+AGG | - | 32969:16261-16280 | MS.gene060861:intron | 30.0% | |
| GGTTCACAATTCTCTTTATA+TGG | - | 32969:16994-17013 | MS.gene060861:CDS | 30.0% | |
| TATAGCAGCGATTAAACATA+AGG | + | 32969:16585-16604 | None:intergenic | 30.0% | |
| TATCAATCTGTGAACACAAA+TGG | + | 32969:14864-14883 | None:intergenic | 30.0% | |
| TATTTGATTGTTAGTTCAGC+CGG | - | 32969:14643-14662 | MS.gene060861:CDS | 30.0% | |
| TGCAAGGACAAAAGATATAT+TGG | - | 32969:16028-16047 | MS.gene060861:CDS | 30.0% | |
| TTCTATGTTACAGATTGTTC+AGG | - | 32969:16908-16927 | MS.gene060861:intron | 30.0% | |
| TTGCTCTCATATTTCATGTT+TGG | - | 32969:15150-15169 | MS.gene060861:intron | 30.0% | |
| ! | AGATTAGTCATCGCAAATAT+TGG | + | 32969:16203-16222 | None:intergenic | 30.0% |
| ! | TCTTGTTTCATATATGTGCA+GGG | - | 32969:14706-14725 | MS.gene060861:CDS | 30.0% |
| ! | TTCTTGTTTCATATATGTGC+AGG | - | 32969:14705-14724 | MS.gene060861:CDS | 30.0% |
| !! | GTTATACCAACTTTTGCTAT+TGG | - | 32969:17055-17074 | MS.gene060861:CDS | 30.0% |
| !! | TTACACAGGAGTACTTTATA+AGG | - | 32969:16504-16523 | MS.gene060861:intron | 30.0% |
| AAACACACATGGGATACTAT+TGG | - | 32969:14888-14907 | MS.gene060861:intron | 35.0% | |
| AACTTAGTATAGTACCTAGG+TGG | + | 32969:14562-14581 | None:intergenic | 35.0% | |
| ACAACAAAACCGAAAAGCAA+AGG | - | 32969:16555-16574 | MS.gene060861:CDS | 35.0% | |
| AGAGATATCAGTGGTACTAA+TGG | - | 32969:15484-15503 | MS.gene060861:intron | 35.0% | |
| AGTTGCATGCATTATCTATC+CGG | - | 32969:15556-15575 | MS.gene060861:CDS | 35.0% | |
| ATGCTTCCAATAGCAAAAGT+TGG | + | 32969:17064-17083 | None:intergenic | 35.0% | |
| ATTATCAGCCAACAAAACTC+AGG | - | 32969:14446-14465 | MS.gene060861:CDS | 35.0% | |
| ATTGATAGAGCAAACACACA+TGG | - | 32969:14877-14896 | MS.gene060861:intron | 35.0% | |
| CAATGTATCATGTGTTACAC+AGG | - | 32969:16490-16509 | MS.gene060861:intron | 35.0% | |
| GAGTACTTTATAAGGAACCA+AGG | - | 32969:16512-16531 | MS.gene060861:intron | 35.0% | |
| GTATCTATCCACTGAAACAT+GGG | + | 32969:15840-15859 | None:intergenic | 35.0% | |
| TATTGCATTGCAATGTTGCA+GGG | - | 32969:16755-16774 | MS.gene060861:intron | 35.0% | |
| TCAATTTCTCTATCGATGTG+AGG | + | 32969:14517-14536 | None:intergenic | 35.0% | |
| TCATACATTTCTTCTGATGG+CGG | - | 32969:14955-14974 | MS.gene060861:CDS | 35.0% | |
| TCCAATAACAAAAGCCTTCA+AGG | + | 32969:16645-16664 | None:intergenic | 35.0% | |
| TTAATCCATAGCATGAACTC+CGG | + | 32969:14665-14684 | None:intergenic | 35.0% | |
| TTAGCACTCAAAACAAAACG+GGG | - | 32969:16792-16811 | MS.gene060861:CDS | 35.0% | |
| TTAGTCATCGCAAATATTGG+TGG | + | 32969:16200-16219 | None:intergenic | 35.0% | |
| TTATTGCATTGCAATGTTGC+AGG | - | 32969:16754-16773 | MS.gene060861:intron | 35.0% | |
| TTGATAGAGCAAACACACAT+GGG | - | 32969:14878-14897 | MS.gene060861:intron | 35.0% | |
| TTTGCATTTACAATGGTTCC+TGG | - | 32969:16667-16686 | MS.gene060861:intron | 35.0% | |
| ! | AAGAATTGAGTTTGGAGTAG+AGG | - | 32969:16865-16884 | MS.gene060861:intron | 35.0% |
| ! | TTGCTATTGGAAGCATGATT+TGG | - | 32969:17068-17087 | MS.gene060861:CDS | 35.0% |
| !! | ACCTTGAAGGCTTTTGTTAT+TGG | - | 32969:16641-16660 | MS.gene060861:CDS | 35.0% |
| !! | CTTGTTTTCAGAGATATCAG+TGG | - | 32969:15475-15494 | MS.gene060861:intron | 35.0% |
| !! | GATTAATAATAGTATCGGCC+AGG | + | 32969:16688-16707 | None:intergenic | 35.0% |
| AAGAAAGAATCCATCCACCT+AGG | - | 32969:14545-14564 | MS.gene060861:CDS | 40.0% | |
| AATCGCTCTCTATCGTTGAT+TGG | + | 32969:15602-15621 | None:intergenic | 40.0% | |
| AATGTGATAGAGGCCAATGA+AGG | - | 32969:15647-15666 | MS.gene060861:CDS | 40.0% | |
| AATGTTGCCATAGAGGTGAT+AGG | - | 32969:15437-15456 | MS.gene060861:intron | 40.0% | |
| ACACGCGTAATTCATGAGAA+TGG | - | 32969:16830-16849 | MS.gene060861:intron | 40.0% | |
| ACATCATATCTGCAAAAGCC+TGG | - | 32969:15519-15538 | MS.gene060861:intron | 40.0% | |
| ACATGGGATACTATTGGAGA+TGG | - | 32969:14894-14913 | MS.gene060861:intron | 40.0% | |
| ACGACGAGAGATATTGAACT+AGG | + | 32969:14594-14613 | None:intergenic | 40.0% | |
| ACTATTGTTACTGGATGACG+AGG | + | 32969:17029-17048 | None:intergenic | 40.0% | |
| AGAAGCAAATGTTGCCATAG+AGG | - | 32969:15430-15449 | MS.gene060861:intron | 40.0% | |
| AGCCTTCAAGGTATGAATCA+TGG | + | 32969:16633-16652 | None:intergenic | 40.0% | |
| AGCGTCTCATCAACAATTTC+AGG | - | 32969:17101-17120 | MS.gene060861:CDS | 40.0% | |
| ATGGCAACATTTGCTTCTTG+TGG | + | 32969:15428-15447 | None:intergenic | 40.0% | |
| ATGTTAAAAAGCTCCACCAC+CGG | - | 32969:15698-15717 | MS.gene060861:CDS | 40.0% | |
| CCATATCCTCTACGAAACAA+TGG | + | 32969:14477-14496 | None:intergenic | 40.0% | |
| CCATTGTTTCGTAGAGGATA+TGG | - | 32969:14474-14493 | MS.gene060861:CDS | 40.0% | |
| CGTATCTATCCACTGAAACA+TGG | + | 32969:15841-15860 | None:intergenic | 40.0% | |
| GATAATCGATGACTGATGCA+TGG | + | 32969:14432-14451 | None:intergenic | 40.0% | |
| GCATGCAACTTTGTCATGAT+GGG | + | 32969:15546-15565 | None:intergenic | 40.0% | |
| GCCTTCAAGGTATGAATCAT+GGG | + | 32969:16632-16651 | None:intergenic | 40.0% | |
| GTAGAGGATGAAACAGCAAT+AGG | - | 32969:16881-16900 | MS.gene060861:intron | 40.0% | |
| GTTGAACCATTGTTTCGTAG+AGG | - | 32969:14468-14487 | MS.gene060861:CDS | 40.0% | |
| GTTTCAGTGGATAGATACGA+GGG | - | 32969:15842-15861 | MS.gene060861:CDS | 40.0% | |
| TAGTATAGTACCTAGGTGGA+TGG | + | 32969:14558-14577 | None:intergenic | 40.0% | |
| TCCATGTGAAGGATCAGATA+GGG | - | 32969:15075-15094 | MS.gene060861:intron | 40.0% | |
| TCCCATGATTCATACCTTGA+AGG | - | 32969:16628-16647 | MS.gene060861:CDS | 40.0% | |
| TGATTCATGCAGAAACTGCA+CGG | - | 32969:14742-14761 | MS.gene060861:CDS | 40.0% | |
| TGCAATGTTGCAGGGATTAA+AGG | - | 32969:16763-16782 | MS.gene060861:intron | 40.0% | |
| TGCATGCAACTTTGTCATGA+TGG | + | 32969:15547-15566 | None:intergenic | 40.0% | |
| TGTTACAGATTGTTCAGGTC+AGG | - | 32969:16913-16932 | MS.gene060861:intron | 40.0% | |
| TGTTTCAGTGGATAGATACG+AGG | - | 32969:15841-15860 | MS.gene060861:CDS | 40.0% | |
| TTCCATGTGAAGGATCAGAT+AGG | - | 32969:15074-15093 | MS.gene060861:intron | 40.0% | |
| TTTCAGTGGATAGATACGAG+GGG | - | 32969:15843-15862 | MS.gene060861:CDS | 40.0% | |
| ! | AATTGGTGGTTCAGTTGCTT+TGG | - | 32969:16973-16992 | MS.gene060861:intron | 40.0% |
| ! | CATGACAGTTTTCCATGTGA+AGG | - | 32969:15064-15083 | MS.gene060861:intron | 40.0% |
| ! | GATATCTCTGAAAACAAGCC+AGG | + | 32969:15473-15492 | None:intergenic | 40.0% |
| ! | GCAATATGAGGTGTTTCATG+CGG | - | 32969:15946-15965 | MS.gene060861:CDS | 40.0% |
| !! | ATCAGTGGTACTAATGGACT+TGG | - | 32969:15490-15509 | MS.gene060861:intron | 40.0% |
| !! | TAAGGTGAGCCTTTGCTTTT+CGG | + | 32969:16567-16586 | None:intergenic | 40.0% |
| !! | TCAGTGGTACTAATGGACTT+GGG | - | 32969:15491-15510 | MS.gene060861:intron | 40.0% |
| !! | TGGTTCAACCTGAGTTTTGT+TGG | + | 32969:14457-14476 | None:intergenic | 40.0% |
| AACAGTGCAACACTGTTGCA+AGG | - | 32969:15400-15419 | MS.gene060861:intron | 45.0% | |
| ACAACAACTTAGGACGATCC+CGG | + | 32969:15898-15917 | None:intergenic | 45.0% | |
| ACACTATCCTGCGTTTGTAG+AGG | - | 32969:15233-15252 | MS.gene060861:intron | 45.0% | |
| ACAGTGCAACACTGTTGCAA+GGG | - | 32969:15401-15420 | MS.gene060861:intron | 45.0% | |
| AGCACAAAAGGCGGTATGAT+GGG | - | 32969:15813-15832 | MS.gene060861:CDS | 45.0% | |
| ATAATGGCGGTGAGCACAAA+AGG | - | 32969:15801-15820 | MS.gene060861:CDS | 45.0% | |
| ATAGAGGCCAATGAAGGAAG+GGG | - | 32969:15653-15672 | MS.gene060861:CDS | 45.0% | |
| ATCCGTTCCTATCACCTCTA+TGG | + | 32969:15447-15466 | None:intergenic | 45.0% | |
| ATGACAACTCTCGTAGTCAC+CGG | + | 32969:15768-15787 | None:intergenic | 45.0% | |
| CAAAACGGGGATACTATCGA+AGG | - | 32969:16805-16824 | MS.gene060861:intron | 45.0% | |
| CTTAGATCCTCTACAAACGC+AGG | + | 32969:15243-15262 | None:intergenic | 45.0% | |
| GAAGGGGAGAGAAAGATATG+AGG | - | 32969:15669-15688 | MS.gene060861:CDS | 45.0% | |
| GACACTTCGCACCAATAACT+TGG | + | 32969:16178-16197 | None:intergenic | 45.0% | |
| GAGACTCTACAAATGCAGCA+CGG | - | 32969:15172-15191 | MS.gene060861:intron | 45.0% | |
| GATAGAGGCCAATGAAGGAA+GGG | - | 32969:15652-15671 | MS.gene060861:CDS | 45.0% | |
| GCTCACAGACATGCAATATG+AGG | - | 32969:15934-15953 | MS.gene060861:CDS | 45.0% | |
| TCAGATCCGGAATGTGATAG+AGG | - | 32969:15637-15656 | MS.gene060861:CDS | 45.0% | |
| TCCCTATCTGATCCTTCACA+TGG | + | 32969:15079-15098 | None:intergenic | 45.0% | |
| TCTCGTGAATCACATTGAGC+AGG | - | 32969:15118-15137 | MS.gene060861:intron | 45.0% | |
| TGATAGAGGCCAATGAAGGA+AGG | - | 32969:15651-15670 | MS.gene060861:CDS | 45.0% | |
| TGCATGCATTATCTATCCGG+AGG | - | 32969:15559-15578 | MS.gene060861:CDS | 45.0% | |
| TGCCATAGAGGTGATAGGAA+CGG | - | 32969:15442-15461 | MS.gene060861:intron | 45.0% | |
| TTAAATATGGTTGGGAGGGG+AGG | + | 32969:16258-16277 | None:intergenic | 45.0% | |
| TTTCTCTCCCCTTCCTTCAT+TGG | + | 32969:15663-15682 | None:intergenic | 45.0% | |
| ! | AATTGTTGATGAGACGCTCG+AGG | + | 32969:17099-17118 | None:intergenic | 45.0% |
| ! | CATTGGCCTCTATCACATTC+CGG | + | 32969:15646-15665 | None:intergenic | 45.0% |
| !! | AACTTTGTCATGATGGGTCC+AGG | + | 32969:15540-15559 | None:intergenic | 45.0% |
| !! | ACATTTCTTCTGATGGCGGA+TGG | - | 32969:14959-14978 | MS.gene060861:CDS | 45.0% |
| !! | TTCTGATGGCGGATGGTTAA+TGG | - | 32969:14966-14985 | MS.gene060861:CDS | 45.0% |
| !! | TTAATATAAATTGTATTAAT+TGG | + | 32969:16436-16455 | None:intergenic | 5.0% |
| CTCTGCAGAGGAATCTGACA+GGG | - | 32969:16221-16240 | MS.gene060861:intron | 50.0% | |
| GAGCACAAAAGGCGGTATGA+TGG | - | 32969:15812-15831 | MS.gene060861:CDS | 50.0% | |
| GCACAAAAGGCGGTATGATG+GGG | - | 32969:15814-15833 | MS.gene060861:CDS | 50.0% | |
| GCGATGACTAATCTCTGCAG+AGG | - | 32969:16209-16228 | MS.gene060861:intron | 50.0% | |
| GGTCTAGATCTGTCAACGTC+TGG | + | 32969:14921-14940 | None:intergenic | 50.0% | |
| GTGATAGGAACGGATCAACC+TGG | - | 32969:15452-15471 | MS.gene060861:intron | 50.0% | |
| TCTCTGCAGAGGAATCTGAC+AGG | - | 32969:16220-16239 | MS.gene060861:intron | 50.0% | |
| TGTTACCTCAAACAGCCCCA+TGG | - | 32969:15970-15989 | MS.gene060861:CDS | 50.0% | |
| TTCAGCCGGAGTTCATGCTA+TGG | - | 32969:14657-14676 | MS.gene060861:CDS | 50.0% | |
| TTCATGCAGAAACTGCACGG+TGG | - | 32969:14745-14764 | MS.gene060861:CDS | 50.0% | |
| ! | TCTCTATCGTTGATTGGCCC+AGG | + | 32969:15596-15615 | None:intergenic | 50.0% |
| ! | TGGAGTACCTGTTCTGCCAT+GGG | + | 32969:15989-16008 | None:intergenic | 50.0% |
| !! | GATGGCGGATGGTTAATGGA+TGG | - | 32969:14970-14989 | MS.gene060861:CDS | 50.0% |
| AAACAGCCCCATGGCAGAAC+AGG | - | 32969:15979-15998 | MS.gene060861:CDS | 55.0% | |
| AGAGTTGTCATGCCTGCCAC+GGG | - | 32969:15777-15796 | MS.gene060861:CDS | 55.0% | |
| ATGGCGGTGAGCACAAAAGG+CGG | - | 32969:15804-15823 | MS.gene060861:CDS | 55.0% | |
| CACCAGATGATGTACGCAGC+CGG | - | 32969:15746-15765 | MS.gene060861:CDS | 55.0% | |
| CAGAAACTGCACGGTGGTGA+AGG | - | 32969:14751-14770 | MS.gene060861:intron | 55.0% | |
| CCCAAGTCGTGGATCAGATC+CGG | - | 32969:15624-15643 | MS.gene060861:CDS | 55.0% | |
| CCGGATCTGATCCACGACTT+GGG | + | 32969:15627-15646 | None:intergenic | 55.0% | |
| CCGGTCACAGTCATACCGAA+CGG | - | 32969:15717-15736 | MS.gene060861:CDS | 55.0% | |
| CCGTTCGGTATGACTGTGAC+CGG | + | 32969:15720-15739 | None:intergenic | 55.0% | |
| CTCTATCGATGTGAGGCTGC+TGG | + | 32969:14510-14529 | None:intergenic | 55.0% | |
| GAGAGTTGTCATGCCTGCCA+CGG | - | 32969:15776-15795 | MS.gene060861:CDS | 55.0% | |
| GATACGAGGGGCGAGATTAC+TGG | - | 32969:15855-15874 | MS.gene060861:CDS | 55.0% | |
| GGTCGGTGAATGTGAGAAGC+CGG | - | 32969:15876-15895 | MS.gene060861:CDS | 55.0% | |
| GTCACAGTCATACCGAACGG+AGG | - | 32969:15720-15739 | MS.gene060861:CDS | 55.0% | |
| GTCGGTGAATGTGAGAAGCC+GGG | - | 32969:15877-15896 | MS.gene060861:CDS | 55.0% | |
| TCCGGATCTGATCCACGACT+TGG | + | 32969:15628-15647 | None:intergenic | 55.0% | |
| TGATGGGGCCCATGTTTCAG+TGG | - | 32969:15829-15848 | MS.gene060861:CDS | 55.0% | |
| TTCGGTATGACTGTGACCGG+TGG | + | 32969:15717-15736 | None:intergenic | 55.0% | |
| TTCTGCCATGGGGCTGTTTG+AGG | + | 32969:15978-15997 | None:intergenic | 55.0% | |
| ! | AGAGCGATTAGCCCAAGTCG+TGG | - | 32969:15613-15632 | MS.gene060861:CDS | 55.0% |
| ! | ATCGTTGATTGGCCCAGGTC+TGG | + | 32969:15591-15610 | None:intergenic | 55.0% |
| ! | CTGGAGTACCTGTTCTGCCA+TGG | + | 32969:15990-16009 | None:intergenic | 55.0% |
| ! | GGAGTACCTGTTCTGCCATG+GGG | + | 32969:15988-16007 | None:intergenic | 55.0% |
| CATCTGGTGGAGCCTCCGTT+CGG | + | 32969:15735-15754 | None:intergenic | 60.0% | |
| CATGCCTGCCACGGGGATAA+TGG | - | 32969:15785-15804 | MS.gene060861:CDS | 60.0% | |
| CCAGGTCTGGATGCATCCTC+CGG | + | 32969:15578-15597 | None:intergenic | 60.0% | |
| CGAGGGGCGAGATTACTGGT+CGG | - | 32969:15859-15878 | MS.gene060861:CDS | 60.0% | |
| CGGAGGATGCATCCAGACCT+GGG | - | 32969:15576-15595 | MS.gene060861:CDS | 60.0% | |
| CGGCTGCGTACATCATCTGG+TGG | + | 32969:15748-15767 | None:intergenic | 60.0% | |
| GAGTTGTCATGCCTGCCACG+GGG | - | 32969:15778-15797 | MS.gene060861:CDS | 60.0% | |
| GGTATGACTGTGACCGGTGG+TGG | + | 32969:15714-15733 | None:intergenic | 60.0% | |
| GGTTGGGAGGGGAGGACTAA+AGG | + | 32969:16250-16269 | None:intergenic | 60.0% | |
| ! | CACCGGCTGCGTACATCATC+TGG | + | 32969:15751-15770 | None:intergenic | 60.0% |
| ACCGCCATTATCCCCGTGGC+AGG | + | 32969:15792-15811 | None:intergenic | 65.0% | |
| CCGGAGGATGCATCCAGACC+TGG | - | 32969:15575-15594 | MS.gene060861:CDS | 65.0% | |
| GCTCACCGCCATTATCCCCG+TGG | + | 32969:15796-15815 | None:intergenic | 65.0% | |
| ! | GCCTGCCACGGGGATAATGG+CGG | - | 32969:15788-15807 | MS.gene060861:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32969 | gene | 14405 | 17138 | 14405 | ID=MS.gene060861 |
| 32969 | mRNA | 14405 | 17138 | 14405 | ID=MS.gene060861.t1;Parent=MS.gene060861 |
| 32969 | exon | 16977 | 17138 | 16977 | ID=MS.gene060861.t1.exon1;Parent=MS.gene060861.t1 |
| 32969 | CDS | 16977 | 17138 | 16977 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 16771 | 16816 | 16771 | ID=MS.gene060861.t1.exon2;Parent=MS.gene060861.t1 |
| 32969 | CDS | 16771 | 16816 | 16771 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 16552 | 16666 | 16552 | ID=MS.gene060861.t1.exon3;Parent=MS.gene060861.t1 |
| 32969 | CDS | 16552 | 16666 | 16552 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 16404 | 16471 | 16404 | ID=MS.gene060861.t1.exon4;Parent=MS.gene060861.t1 |
| 32969 | CDS | 16404 | 16471 | 16404 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 15543 | 16190 | 15543 | ID=MS.gene060861.t1.exon5;Parent=MS.gene060861.t1 |
| 32969 | CDS | 15543 | 16190 | 15543 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 14921 | 15031 | 14921 | ID=MS.gene060861.t1.exon6;Parent=MS.gene060861.t1 |
| 32969 | CDS | 14921 | 15031 | 14921 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| 32969 | exon | 14405 | 14767 | 14405 | ID=MS.gene060861.t1.exon7;Parent=MS.gene060861.t1 |
| 32969 | CDS | 14405 | 14767 | 14405 | ID=cds.MS.gene060861.t1;Parent=MS.gene060861.t1 |
| Gene Sequence |
| Protein sequence |
