Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060864.t1 | XP_003608551.2 | 90.2 | 489 | 46 | 1 | 15 | 503 | 4 | 490 | 2.20E-254 | 887.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060864.t1 | Q9FHP1 | 47.8 | 483 | 234 | 9 | 30 | 501 | 2 | 477 | 5.6e-113 | 409.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060864.t1 | G7JF79 | 90.2 | 489 | 46 | 1 | 15 | 503 | 4 | 490 | 1.6e-254 | 887.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060861 | MS.gene060864 | 0.998285 | 8.17E-261 | -1.69E-46 |
| MS.gene060864 | MS.gene44444 | 0.936692 | 1.16E-97 | -1.69E-46 |
| MS.gene060864 | MS.gene44446 | 0.937391 | 3.74E-98 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTAATTGAAAAATC+TGG | + | 32968:10248-10267 | None:intergenic | 10.0% |
| !! | AATTAAGTAAAGTTAAATTA+AGG | + | 32968:9036-9055 | None:intergenic | 10.0% |
| !! | AATACTCTAATTTAAAAACA+GGG | + | 32968:10703-10722 | None:intergenic | 15.0% |
| !! | ATCAAAACCTAATTTAAATA+TGG | + | 32968:10509-10528 | None:intergenic | 15.0% |
| !! | GTTAAGATTAATAATAGTAT+CGG | + | 32968:10930-10949 | None:intergenic | 15.0% |
| !!! | ATGATGATGAATTAATATTT+TGG | + | 32968:10578-10597 | None:intergenic | 15.0% |
| !!! | TTTTCAATTAATTATTTGCA+AGG | - | 32968:10251-10270 | MS.gene060864:CDS | 15.0% |
| !! | AAAAAAAGTAACCAAGTTAT+TGG | - | 32968:10402-10421 | MS.gene060864:CDS | 20.0% |
| !! | AAACCTAATTTAAATATGGT+TGG | + | 32968:10505-10524 | None:intergenic | 20.0% |
| !! | AACCTAATTTAAATATGGTT+GGG | + | 32968:10504-10523 | None:intergenic | 20.0% |
| !! | ATACTCTAATTTAAAAACAG+GGG | + | 32968:10702-10721 | None:intergenic | 20.0% |
| !! | CAATACTCTAATTTAAAAAC+AGG | + | 32968:10704-10723 | None:intergenic | 20.0% |
| !!! | AAATAGTGCATATCTTTTTT+GGG | + | 32968:8867-8886 | None:intergenic | 20.0% |
| !!! | GAATAGACTTTAAAATGATA+AGG | - | 32968:10360-10379 | MS.gene060864:CDS | 20.0% |
| !!! | TGCAATTCTAAGATTATTTT+TGG | - | 32968:9279-9298 | MS.gene060864:intron | 20.0% |
| ! | AAATCATACATTTCTTCTGA+TGG | - | 32968:9191-9210 | MS.gene060864:CDS | 25.0% |
| ! | ACAATATCAAACAACAACTT+AGG | + | 32968:10147-10166 | None:intergenic | 25.0% |
| ! | ATATATGAAACAAGAAACAC+GGG | + | 32968:8940-8959 | None:intergenic | 25.0% |
| ! | ATCACTATTCAATTAATGTG+TGG | - | 32968:10327-10346 | MS.gene060864:CDS | 25.0% |
| ! | ATCAGAAGAAATGTATGATT+TGG | + | 32968:9192-9211 | None:intergenic | 25.0% |
| ! | CATATATGAAACAAGAAACA+CGG | + | 32968:8941-8960 | None:intergenic | 25.0% |
| ! | TAATTTAAATATGGTTGGGA+GGG | + | 32968:10500-10519 | None:intergenic | 25.0% |
| ! | TCTATAACAAGAATTGAGTT+TGG | - | 32968:11094-11113 | MS.gene060864:intron | 25.0% |
| ! | TGTACACATTGTTTATATTG+AGG | + | 32968:9254-9273 | None:intergenic | 25.0% |
| ! | TTAAAGTCTATTCATGTTTG+TGG | + | 32968:10353-10372 | None:intergenic | 25.0% |
| ! | TTGATAAAAAGAGAAATTGG+TGG | - | 32968:11196-11215 | MS.gene060864:intron | 25.0% |
| !! | ATATTGGTGCAATTTTTATG+TGG | - | 32968:10283-10302 | MS.gene060864:CDS | 25.0% |
| !! | GATTATATTTAGAACTACCT+TGG | + | 32968:10770-10789 | None:intergenic | 25.0% |
| !! | TGTATGATTTGGAAATTGTA+AGG | + | 32968:9181-9200 | None:intergenic | 25.0% |
| !!! | CAAATAGTGCATATCTTTTT+TGG | + | 32968:8868-8887 | None:intergenic | 25.0% |
| !!! | GAGTTGATAAAAAGAGAAAT+TGG | - | 32968:11193-11212 | MS.gene060864:intron | 25.0% |
| AACATCTCTACTATTGTTAC+TGG | + | 32968:11275-11294 | None:intergenic | 30.0% | |
| AATTTAAATATGGTTGGGAG+GGG | + | 32968:10499-10518 | None:intergenic | 30.0% | |
| ACAAACTTAGTATAGTACCT+AGG | + | 32968:8804-8823 | None:intergenic | 30.0% | |
| ATTAGCACTCAAAACAAAAC+GGG | - | 32968:11028-11047 | MS.gene060864:CDS | 30.0% | |
| CATTAGCACTCAAAACAAAA+CGG | - | 32968:11027-11046 | MS.gene060864:CDS | 30.0% | |
| CTAATTTAAATATGGTTGGG+AGG | + | 32968:10501-10520 | None:intergenic | 30.0% | |
| CTCCCAACCATATTTAAATT+AGG | - | 32968:10499-10518 | MS.gene060864:intron | 30.0% | |
| GGTTCACAATTCTCTTTATA+TGG | - | 32968:11231-11250 | MS.gene060864:CDS | 30.0% | |
| TATAGCAGCGATTAAACATA+AGG | + | 32968:10823-10842 | None:intergenic | 30.0% | |
| TATCAATCTGTGAACACAAA+TGG | + | 32968:9103-9122 | None:intergenic | 30.0% | |
| TATTTGATTGTTAGTTCAGC+CGG | - | 32968:8882-8901 | MS.gene060864:CDS | 30.0% | |
| TGCAAGGACAAAAGATATAT+TGG | - | 32968:10267-10286 | MS.gene060864:CDS | 30.0% | |
| TTCTATGTTACAGATTGTTC+AGG | - | 32968:11145-11164 | MS.gene060864:intron | 30.0% | |
| TTGCTCTCATATTTCATGTT+TGG | - | 32968:9389-9408 | MS.gene060864:intron | 30.0% | |
| ! | AGATTAGTCATCGCAAATAT+TGG | + | 32968:10441-10460 | None:intergenic | 30.0% |
| ! | TCTTGTTTCATATATGTGCA+GGG | - | 32968:8945-8964 | MS.gene060864:CDS | 30.0% |
| ! | TTCTTGTTTCATATATGTGC+AGG | - | 32968:8944-8963 | MS.gene060864:CDS | 30.0% |
| ! | TTTTGCATTTACAATGTTCC+TGG | - | 32968:10904-10923 | MS.gene060864:intron | 30.0% |
| !! | GTTATACCAACTTTTGCTAT+TGG | - | 32968:11292-11311 | MS.gene060864:CDS | 30.0% |
| !! | TTACACAGGAGTACTTTATA+AGG | - | 32968:10742-10761 | MS.gene060864:intron | 30.0% |
| AAACACACATGGGATACTAT+TGG | - | 32968:9127-9146 | MS.gene060864:intron | 35.0% | |
| AACTTAGTATAGTACCTAGG+TGG | + | 32968:8801-8820 | None:intergenic | 35.0% | |
| ACAACAAAACCGAAAAGCAA+AGG | - | 32968:10793-10812 | MS.gene060864:CDS | 35.0% | |
| AGAGATATCAGTGGTACTAA+TGG | - | 32968:9723-9742 | MS.gene060864:intron | 35.0% | |
| AGTTGCATGCATTATCTATC+CGG | - | 32968:9795-9814 | MS.gene060864:CDS | 35.0% | |
| ATGCTTCCAATAGCAAAAGT+TGG | + | 32968:11301-11320 | None:intergenic | 35.0% | |
| ATTATCAGCCAACAAAACTC+AGG | - | 32968:8685-8704 | MS.gene060864:CDS | 35.0% | |
| ATTGATAGAGCAAACACACA+TGG | - | 32968:9116-9135 | MS.gene060864:intron | 35.0% | |
| CAATGTATCATGTGTTACAC+AGG | - | 32968:10728-10747 | MS.gene060864:intron | 35.0% | |
| GAGTACTTTATAAGGAACCA+AGG | - | 32968:10750-10769 | MS.gene060864:intron | 35.0% | |
| GTATCTATCCACTGAAACAT+GGG | + | 32968:10079-10098 | None:intergenic | 35.0% | |
| TATTGCATTGCAATGTTGCA+GGG | - | 32968:10992-11011 | MS.gene060864:intron | 35.0% | |
| TCAATTTCTCTATCGATGTG+AGG | + | 32968:8756-8775 | None:intergenic | 35.0% | |
| TCATACATTTCTTCTGATGG+CGG | - | 32968:9194-9213 | MS.gene060864:CDS | 35.0% | |
| TCCAATAACAAAAGCCTTCA+AGG | + | 32968:10883-10902 | None:intergenic | 35.0% | |
| TTAATCCATAGCATGAACTC+CGG | + | 32968:8904-8923 | None:intergenic | 35.0% | |
| TTAGCACTCAAAACAAAACG+GGG | - | 32968:11029-11048 | MS.gene060864:CDS | 35.0% | |
| TTAGTCATCGCAAATATTGG+TGG | + | 32968:10438-10457 | None:intergenic | 35.0% | |
| TTATTGCATTGCAATGTTGC+AGG | - | 32968:10991-11010 | MS.gene060864:intron | 35.0% | |
| TTGATAGAGCAAACACACAT+GGG | - | 32968:9117-9136 | MS.gene060864:intron | 35.0% | |
| ! | AAGAATTGAGTTTGGAGTAG+AGG | - | 32968:11102-11121 | MS.gene060864:intron | 35.0% |
| ! | TTGCTATTGGAAGCATGATT+TGG | - | 32968:11305-11324 | MS.gene060864:CDS | 35.0% |
| !! | ACCTTGAAGGCTTTTGTTAT+TGG | - | 32968:10879-10898 | MS.gene060864:CDS | 35.0% |
| !! | CTTGTTTTCAGAGATATCAG+TGG | - | 32968:9714-9733 | MS.gene060864:intron | 35.0% |
| !! | GATTAATAATAGTATCGGCC+AGG | + | 32968:10925-10944 | None:intergenic | 35.0% |
| AAGAAAGAATCCATCCACCT+AGG | - | 32968:8784-8803 | MS.gene060864:CDS | 40.0% | |
| AATCGCTCTCTATCGTTGAT+TGG | + | 32968:9841-9860 | None:intergenic | 40.0% | |
| AATGTGATAGAGGCCAATGA+AGG | - | 32968:9886-9905 | MS.gene060864:CDS | 40.0% | |
| AATGTTGCCATAGAGGTGAT+AGG | - | 32968:9676-9695 | MS.gene060864:intron | 40.0% | |
| ACACGCGTAATTCATGAGAA+TGG | - | 32968:11067-11086 | MS.gene060864:intron | 40.0% | |
| ACATCATATCTGCAAAAGCC+TGG | - | 32968:9758-9777 | MS.gene060864:intron | 40.0% | |
| ACATGGGATACTATTGGAGA+TGG | - | 32968:9133-9152 | MS.gene060864:intron | 40.0% | |
| ACGACGAGAGATATTGAACT+AGG | + | 32968:8833-8852 | None:intergenic | 40.0% | |
| ACTATTGTTACTGGATGACG+AGG | + | 32968:11266-11285 | None:intergenic | 40.0% | |
| AGAAGCAAATGTTGCCATAG+AGG | - | 32968:9669-9688 | MS.gene060864:intron | 40.0% | |
| AGCCTTCAAGGTATGAATCA+TGG | + | 32968:10871-10890 | None:intergenic | 40.0% | |
| AGCGTCTCATCAACAATTTC+AGG | - | 32968:11338-11357 | MS.gene060864:CDS | 40.0% | |
| ATGGCAACATTTGCTTCTTG+TGG | + | 32968:9667-9686 | None:intergenic | 40.0% | |
| ATGTTAAAAAGCTCCACCAC+CGG | - | 32968:9937-9956 | MS.gene060864:CDS | 40.0% | |
| CCATATCCTCTACGAAACAA+TGG | + | 32968:8716-8735 | None:intergenic | 40.0% | |
| CCATTGTTTCGTAGAGGATA+TGG | - | 32968:8713-8732 | MS.gene060864:CDS | 40.0% | |
| CGTATCTATCCACTGAAACA+TGG | + | 32968:10080-10099 | None:intergenic | 40.0% | |
| GATAATCGATGACTGATGCA+TGG | + | 32968:8671-8690 | None:intergenic | 40.0% | |
| GCATGCAACTTTGTCATGAT+GGG | + | 32968:9785-9804 | None:intergenic | 40.0% | |
| GCCTTCAAGGTATGAATCAT+GGG | + | 32968:10870-10889 | None:intergenic | 40.0% | |
| GTAGAGGATGAAACAGCAAT+AGG | - | 32968:11118-11137 | MS.gene060864:intron | 40.0% | |
| GTTGAACCATTGTTTCGTAG+AGG | - | 32968:8707-8726 | MS.gene060864:CDS | 40.0% | |
| GTTTCAGTGGATAGATACGA+GGG | - | 32968:10081-10100 | MS.gene060864:CDS | 40.0% | |
| TAGTATAGTACCTAGGTGGA+TGG | + | 32968:8797-8816 | None:intergenic | 40.0% | |
| TCCATGTGAAGGATCAGATA+GGG | - | 32968:9314-9333 | MS.gene060864:intron | 40.0% | |
| TCCCATGATTCATACCTTGA+AGG | - | 32968:10866-10885 | MS.gene060864:CDS | 40.0% | |
| TGATTCATGCAGAAACTGCA+CGG | - | 32968:8981-9000 | MS.gene060864:CDS | 40.0% | |
| TGCAATGTTGCAGGGATTAA+AGG | - | 32968:11000-11019 | MS.gene060864:intron | 40.0% | |
| TGCATGCAACTTTGTCATGA+TGG | + | 32968:9786-9805 | None:intergenic | 40.0% | |
| TGTTACAGATTGTTCAGGTC+AGG | - | 32968:11150-11169 | MS.gene060864:intron | 40.0% | |
| TGTTTCAGTGGATAGATACG+AGG | - | 32968:10080-10099 | MS.gene060864:CDS | 40.0% | |
| TTCCATGTGAAGGATCAGAT+AGG | - | 32968:9313-9332 | MS.gene060864:intron | 40.0% | |
| TTTCAGTGGATAGATACGAG+GGG | - | 32968:10082-10101 | MS.gene060864:CDS | 40.0% | |
| ! | AATTGGTGGTTCAGTTGCTT+TGG | - | 32968:11210-11229 | MS.gene060864:intron | 40.0% |
| ! | CATGACAGTTTTCCATGTGA+AGG | - | 32968:9303-9322 | MS.gene060864:intron | 40.0% |
| ! | GATATCTCTGAAAACAAGCC+AGG | + | 32968:9712-9731 | None:intergenic | 40.0% |
| ! | GCAATATGAGGTGTTTCATG+CGG | - | 32968:10185-10204 | MS.gene060864:CDS | 40.0% |
| !! | ATCAGTGGTACTAATGGACT+TGG | - | 32968:9729-9748 | MS.gene060864:intron | 40.0% |
| !! | TAAGGTGAGCCTTTGCTTTT+CGG | + | 32968:10805-10824 | None:intergenic | 40.0% |
| !! | TCAGTGGTACTAATGGACTT+GGG | - | 32968:9730-9749 | MS.gene060864:intron | 40.0% |
| !! | TGGTTCAACCTGAGTTTTGT+TGG | + | 32968:8696-8715 | None:intergenic | 40.0% |
| AACAGTGCAACACTGTTGCA+AGG | - | 32968:9639-9658 | MS.gene060864:intron | 45.0% | |
| ACAACAACTTAGGACGATCC+CGG | + | 32968:10137-10156 | None:intergenic | 45.0% | |
| ACACTATCCTGCGTTTGTAG+AGG | - | 32968:9472-9491 | MS.gene060864:intron | 45.0% | |
| ACAGTGCAACACTGTTGCAA+GGG | - | 32968:9640-9659 | MS.gene060864:intron | 45.0% | |
| AGCACAAAAGGCGGTATGAT+GGG | - | 32968:10052-10071 | MS.gene060864:CDS | 45.0% | |
| ATAATGGCGGTGAGCACAAA+AGG | - | 32968:10040-10059 | MS.gene060864:CDS | 45.0% | |
| ATAGAGGCCAATGAAGGAAG+GGG | - | 32968:9892-9911 | MS.gene060864:CDS | 45.0% | |
| ATCCGTTCCTATCACCTCTA+TGG | + | 32968:9686-9705 | None:intergenic | 45.0% | |
| ATGACAACTCTCGTAGTCAC+CGG | + | 32968:10007-10026 | None:intergenic | 45.0% | |
| CAAAACGGGGATACTATCGA+AGG | - | 32968:11042-11061 | MS.gene060864:intron | 45.0% | |
| CTTAGATCCTCTACAAACGC+AGG | + | 32968:9482-9501 | None:intergenic | 45.0% | |
| GAAGGGGAGAGAAAGATATG+AGG | - | 32968:9908-9927 | MS.gene060864:CDS | 45.0% | |
| GACACTTCGCACCAATAACT+TGG | + | 32968:10416-10435 | None:intergenic | 45.0% | |
| GAGACTCTACAAATGCAGCA+CGG | - | 32968:9411-9430 | MS.gene060864:intron | 45.0% | |
| GATAGAGGCCAATGAAGGAA+GGG | - | 32968:9891-9910 | MS.gene060864:CDS | 45.0% | |
| GCTCACAGACATGCAATATG+AGG | - | 32968:10173-10192 | MS.gene060864:CDS | 45.0% | |
| TCAGATCCGGAATGTGATAG+AGG | - | 32968:9876-9895 | MS.gene060864:CDS | 45.0% | |
| TCCCTATCTGATCCTTCACA+TGG | + | 32968:9318-9337 | None:intergenic | 45.0% | |
| TCTCGTGAATCACATTGAGC+AGG | - | 32968:9357-9376 | MS.gene060864:intron | 45.0% | |
| TGATAGAGGCCAATGAAGGA+AGG | - | 32968:9890-9909 | MS.gene060864:CDS | 45.0% | |
| TGCATGCATTATCTATCCGG+AGG | - | 32968:9798-9817 | MS.gene060864:CDS | 45.0% | |
| TGCCATAGAGGTGATAGGAA+CGG | - | 32968:9681-9700 | MS.gene060864:intron | 45.0% | |
| TTAAATATGGTTGGGAGGGG+AGG | + | 32968:10496-10515 | None:intergenic | 45.0% | |
| TTTCTCTCCCCTTCCTTCAT+TGG | + | 32968:9902-9921 | None:intergenic | 45.0% | |
| ! | AATTGTTGATGAGACGCTCG+AGG | + | 32968:11336-11355 | None:intergenic | 45.0% |
| ! | CATTGGCCTCTATCACATTC+CGG | + | 32968:9885-9904 | None:intergenic | 45.0% |
| !! | AACTTTGTCATGATGGGTCC+AGG | + | 32968:9779-9798 | None:intergenic | 45.0% |
| !! | ACATTTCTTCTGATGGCGGA+TGG | - | 32968:9198-9217 | MS.gene060864:CDS | 45.0% |
| !! | TTCTGATGGCGGATGGTTAA+TGG | - | 32968:9205-9224 | MS.gene060864:CDS | 45.0% |
| !! | TTAATATAAATTGTATTAAT+TGG | + | 32968:10674-10693 | None:intergenic | 5.0% |
| CTCTGCAGAGGAATCTGACA+GGG | - | 32968:10459-10478 | MS.gene060864:intron | 50.0% | |
| GAGCACAAAAGGCGGTATGA+TGG | - | 32968:10051-10070 | MS.gene060864:CDS | 50.0% | |
| GCACAAAAGGCGGTATGATG+GGG | - | 32968:10053-10072 | MS.gene060864:CDS | 50.0% | |
| GCGATGACTAATCTCTGCAG+AGG | - | 32968:10447-10466 | MS.gene060864:intron | 50.0% | |
| GGTCTAGATCTGTCAACGTC+TGG | + | 32968:9160-9179 | None:intergenic | 50.0% | |
| GTGATAGGAACGGATCAACC+TGG | - | 32968:9691-9710 | MS.gene060864:intron | 50.0% | |
| TCTCTGCAGAGGAATCTGAC+AGG | - | 32968:10458-10477 | MS.gene060864:intron | 50.0% | |
| TGTTACCTCAAACAGCCCCA+TGG | - | 32968:10209-10228 | MS.gene060864:CDS | 50.0% | |
| TTCAGCCGGAGTTCATGCTA+TGG | - | 32968:8896-8915 | MS.gene060864:CDS | 50.0% | |
| TTCATGCAGAAACTGCACGG+TGG | - | 32968:8984-9003 | MS.gene060864:CDS | 50.0% | |
| ! | TCTCTATCGTTGATTGGCCC+AGG | + | 32968:9835-9854 | None:intergenic | 50.0% |
| ! | TGGAGTACCTGTTCTGCCAT+GGG | + | 32968:10228-10247 | None:intergenic | 50.0% |
| !! | GATGGCGGATGGTTAATGGA+TGG | - | 32968:9209-9228 | MS.gene060864:CDS | 50.0% |
| AAACAGCCCCATGGCAGAAC+AGG | - | 32968:10218-10237 | MS.gene060864:CDS | 55.0% | |
| AGAGTTGTCATGCCTGCCAC+GGG | - | 32968:10016-10035 | MS.gene060864:CDS | 55.0% | |
| ATGGCGGTGAGCACAAAAGG+CGG | - | 32968:10043-10062 | MS.gene060864:CDS | 55.0% | |
| CACCAGATGATGTACGCAGC+CGG | - | 32968:9985-10004 | MS.gene060864:CDS | 55.0% | |
| CAGAAACTGCACGGTGGTGA+AGG | - | 32968:8990-9009 | MS.gene060864:intron | 55.0% | |
| CCCAAGTCGTGGATCAGATC+CGG | - | 32968:9863-9882 | MS.gene060864:CDS | 55.0% | |
| CCGGATCTGATCCACGACTT+GGG | + | 32968:9866-9885 | None:intergenic | 55.0% | |
| CCGGTCACAGTCATACCGAA+CGG | - | 32968:9956-9975 | MS.gene060864:CDS | 55.0% | |
| CCGTTCGGTATGACTGTGAC+CGG | + | 32968:9959-9978 | None:intergenic | 55.0% | |
| CTCTATCGATGTGAGGCTGC+TGG | + | 32968:8749-8768 | None:intergenic | 55.0% | |
| GAGAGTTGTCATGCCTGCCA+CGG | - | 32968:10015-10034 | MS.gene060864:CDS | 55.0% | |
| GATACGAGGGGCGAGATTAC+TGG | - | 32968:10094-10113 | MS.gene060864:CDS | 55.0% | |
| GGTCGGTGAATGTGAGAAGC+CGG | - | 32968:10115-10134 | MS.gene060864:CDS | 55.0% | |
| GTCACAGTCATACCGAACGG+AGG | - | 32968:9959-9978 | MS.gene060864:CDS | 55.0% | |
| GTCGGTGAATGTGAGAAGCC+GGG | - | 32968:10116-10135 | MS.gene060864:CDS | 55.0% | |
| TCCGGATCTGATCCACGACT+TGG | + | 32968:9867-9886 | None:intergenic | 55.0% | |
| TGATGGGGCCCATGTTTCAG+TGG | - | 32968:10068-10087 | MS.gene060864:CDS | 55.0% | |
| TTCGGTATGACTGTGACCGG+TGG | + | 32968:9956-9975 | None:intergenic | 55.0% | |
| TTCTGCCATGGGGCTGTTTG+AGG | + | 32968:10217-10236 | None:intergenic | 55.0% | |
| ! | AGAGCGATTAGCCCAAGTCG+TGG | - | 32968:9852-9871 | MS.gene060864:CDS | 55.0% |
| ! | ATCGTTGATTGGCCCAGGTC+TGG | + | 32968:9830-9849 | None:intergenic | 55.0% |
| ! | CTGGAGTACCTGTTCTGCCA+TGG | + | 32968:10229-10248 | None:intergenic | 55.0% |
| ! | GGAGTACCTGTTCTGCCATG+GGG | + | 32968:10227-10246 | None:intergenic | 55.0% |
| CATCTGGTGGAGCCTCCGTT+CGG | + | 32968:9974-9993 | None:intergenic | 60.0% | |
| CATGCCTGCCACGGGGATAA+TGG | - | 32968:10024-10043 | MS.gene060864:CDS | 60.0% | |
| CCAGGTCTGGATGCATCCTC+CGG | + | 32968:9817-9836 | None:intergenic | 60.0% | |
| CGAGGGGCGAGATTACTGGT+CGG | - | 32968:10098-10117 | MS.gene060864:CDS | 60.0% | |
| CGGAGGATGCATCCAGACCT+GGG | - | 32968:9815-9834 | MS.gene060864:CDS | 60.0% | |
| CGGCTGCGTACATCATCTGG+TGG | + | 32968:9987-10006 | None:intergenic | 60.0% | |
| GAGTTGTCATGCCTGCCACG+GGG | - | 32968:10017-10036 | MS.gene060864:CDS | 60.0% | |
| GGTATGACTGTGACCGGTGG+TGG | + | 32968:9953-9972 | None:intergenic | 60.0% | |
| GGTTGGGAGGGGAGGACTAA+AGG | + | 32968:10488-10507 | None:intergenic | 60.0% | |
| ! | CACCGGCTGCGTACATCATC+TGG | + | 32968:9990-10009 | None:intergenic | 60.0% |
| ACCGCCATTATCCCCGTGGC+AGG | + | 32968:10031-10050 | None:intergenic | 65.0% | |
| CCGGAGGATGCATCCAGACC+TGG | - | 32968:9814-9833 | MS.gene060864:CDS | 65.0% | |
| GCTCACCGCCATTATCCCCG+TGG | + | 32968:10035-10054 | None:intergenic | 65.0% | |
| ! | GCCTGCCACGGGGATAATGG+CGG | - | 32968:10027-10046 | MS.gene060864:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32968 | gene | 8644 | 11375 | 8644 | ID=MS.gene060864 |
| 32968 | mRNA | 8644 | 11375 | 8644 | ID=MS.gene060864.t1;Parent=MS.gene060864 |
| 32968 | exon | 11214 | 11375 | 11214 | ID=MS.gene060864.t1.exon1;Parent=MS.gene060864.t1 |
| 32968 | CDS | 11214 | 11375 | 11214 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 11008 | 11053 | 11008 | ID=MS.gene060864.t1.exon2;Parent=MS.gene060864.t1 |
| 32968 | CDS | 11008 | 11053 | 11008 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 10789 | 10903 | 10789 | ID=MS.gene060864.t1.exon3;Parent=MS.gene060864.t1 |
| 32968 | CDS | 10789 | 10903 | 10789 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 10641 | 10708 | 10641 | ID=MS.gene060864.t1.exon4;Parent=MS.gene060864.t1 |
| 32968 | CDS | 10641 | 10708 | 10641 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 9780 | 10427 | 9780 | ID=MS.gene060864.t1.exon5;Parent=MS.gene060864.t1 |
| 32968 | CDS | 9780 | 10427 | 9780 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 9159 | 9269 | 9159 | ID=MS.gene060864.t1.exon6;Parent=MS.gene060864.t1 |
| 32968 | CDS | 9159 | 9269 | 9159 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| 32968 | exon | 8644 | 9006 | 8644 | ID=MS.gene060864.t1.exon7;Parent=MS.gene060864.t1 |
| 32968 | CDS | 8644 | 9006 | 8644 | ID=cds.MS.gene060864.t1;Parent=MS.gene060864.t1 |
| Gene Sequence |
| Protein sequence |
