AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45081

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45081.t1 MTR_5g034910 82.799 343 9 1 1 293 1 343 0.0 555
MS.gene45081.t1 MTR_5g034930 63.584 346 70 3 1 291 1 345 4.68e-145 411
MS.gene45081.t1 MTR_5g034980 61.538 325 75 1 5 279 5 329 5.40e-135 386
MS.gene45081.t1 MTR_5g034970 59.880 334 71 2 1 284 1 321 4.56e-123 355
MS.gene45081.t1 MTR_5g034980 55.769 260 61 2 5 214 5 260 5.31e-90 270
MS.gene45081.t1 MTR_5g034990 43.182 264 140 2 36 292 92 352 2.92e-67 213
MS.gene45081.t1 MTR_4g106720 46.721 244 130 0 34 277 89 332 2.44e-64 206
MS.gene45081.t1 MTR_0103s0090 43.939 264 131 4 42 293 5 263 9.02e-63 199
MS.gene45081.t1 MTR_0103s0090 43.704 270 135 4 36 293 90 354 2.21e-62 201
MS.gene45081.t1 MTR_3g090550 42.353 255 136 3 34 283 82 330 5.81e-61 197
MS.gene45081.t1 MTR_1g014510 42.449 245 137 3 36 277 91 334 3.06e-59 196
MS.gene45081.t1 MTR_6g007743 40.664 241 140 1 36 276 91 328 1.39e-55 184
MS.gene45081.t1 MTR_6g007750 43.033 244 131 3 36 276 93 331 1.41e-55 184
MS.gene45081.t1 MTR_6g007760 41.667 228 117 2 36 255 90 309 1.34e-54 180
MS.gene45081.t1 MTR_6g007747 41.667 264 140 3 36 290 89 347 1.00e-53 179
MS.gene45081.t1 MTR_6g007753 42.739 241 135 1 36 276 375 612 2.41e-53 184
MS.gene45081.t1 MTR_6g007753 39.614 207 122 1 70 276 85 288 4.58e-40 147
MS.gene45081.t1 MTR_6g007757 45.267 243 126 2 36 276 92 329 7.10e-52 174
MS.gene45081.t1 MTR_3g072500 36.220 254 150 3 36 282 99 347 8.80e-49 167
MS.gene45081.t1 MTR_3g072500 35.743 249 148 3 41 282 1 244 4.03e-48 162
MS.gene45081.t1 MTR_3g072560 36.400 250 156 2 36 285 97 343 2.86e-47 163
MS.gene45081.t1 MTR_3g012420 35.632 261 155 6 42 293 102 358 3.92e-46 160
MS.gene45081.t1 MTR_1g030580 36.653 251 149 2 36 281 95 340 7.91e-46 159
MS.gene45081.t1 MTR_8g041390 35.685 241 148 3 42 276 98 337 3.13e-45 157
MS.gene45081.t1 MTR_6g007740 39.754 244 138 3 36 276 91 328 1.34e-44 158
MS.gene45081.t1 MTR_6g081840 33.074 257 164 2 41 291 94 348 1.18e-42 150
MS.gene45081.t1 MTR_3g072530 34.375 256 159 5 36 286 93 344 4.98e-42 148
MS.gene45081.t1 MTR_1g074160 32.794 247 153 4 43 283 99 338 6.85e-42 147
MS.gene45081.t1 MTR_1g038560 34.008 247 158 2 34 277 78 322 1.53e-41 146
MS.gene45081.t1 MTR_0096s0100 30.682 264 176 3 36 293 97 359 2.80e-41 146
MS.gene45081.t1 MTR_3g095460 32.258 248 165 1 38 282 86 333 9.17e-40 142
MS.gene45081.t1 MTR_7g100050 34.940 249 149 4 36 277 92 334 1.63e-39 142
MS.gene45081.t1 MTR_1g074120 31.174 247 157 4 43 283 102 341 1.78e-39 141
MS.gene45081.t1 MTR_1g068630 33.871 248 153 4 36 278 94 335 2.88e-39 141
MS.gene45081.t1 MTR_1g114210 31.535 241 164 1 36 275 88 328 3.65e-39 140
MS.gene45081.t1 MTR_1g074020 33.603 247 151 4 43 283 99 338 4.09e-39 140
MS.gene45081.t1 MTR_4g129650 35.391 243 150 3 42 282 96 333 8.42e-39 140
MS.gene45081.t1 MTR_1g070175 28.514 249 174 1 43 291 102 346 2.23e-38 139
MS.gene45081.t1 MTR_1g030600 32.046 259 169 4 36 289 97 353 8.42e-38 138
MS.gene45081.t1 MTR_1g051120 32.653 245 162 3 41 283 100 343 1.05e-37 137
MS.gene45081.t1 MTR_4g129650 35.526 228 140 3 54 279 1 223 3.05e-37 133
MS.gene45081.t1 MTR_2g016710 31.667 240 162 1 36 275 87 324 5.22e-37 135
MS.gene45081.t1 MTR_8g092650 34.211 228 142 3 56 276 26 252 6.60e-37 132
MS.gene45081.t1 MTR_1g073990 32.258 248 154 4 43 283 102 342 2.44e-36 133
MS.gene45081.t1 MTR_8g006010 33.475 236 153 3 42 275 95 328 4.28e-36 133
MS.gene45081.t1 MTR_7g111830 29.323 266 180 3 25 282 75 340 4.37e-36 133
MS.gene45081.t1 MTR_1g074070 30.769 247 158 4 43 283 102 341 5.68e-36 132
MS.gene45081.t1 MTR_8g092650 34.361 227 143 2 56 276 104 330 6.13e-36 132
MS.gene45081.t1 MTR_3g112480 28.881 277 180 3 18 281 30 302 2.57e-35 130
MS.gene45081.t1 MTR_1g023180 28.077 260 169 1 41 282 105 364 3.50e-35 131
MS.gene45081.t1 MTR_3g112480 28.881 277 180 3 18 281 85 357 5.83e-35 130
MS.gene45081.t1 MTR_5g021160 28.807 243 171 1 41 281 8 250 1.02e-34 127
MS.gene45081.t1 MTR_2g027030 33.621 232 150 3 47 275 102 332 8.11e-34 127
MS.gene45081.t1 MTR_5g021160 28.807 243 171 1 41 281 91 333 8.98e-34 126
MS.gene45081.t1 MTR_1g030400 28.938 273 171 3 25 282 75 339 1.87e-33 126
MS.gene45081.t1 MTR_6g036450 31.200 250 169 2 38 284 96 345 2.87e-33 125
MS.gene45081.t1 MTR_2g007990 31.707 246 162 3 46 285 104 349 3.32e-33 125
MS.gene45081.t1 MTR_2g007960 29.084 251 168 2 34 275 89 338 3.79e-33 125
MS.gene45081.t1 MTR_2g065550 30.417 240 166 1 36 275 91 329 1.80e-32 123
MS.gene45081.t1 MTR_4g094352 32.353 272 154 5 38 293 94 351 1.99e-32 123
MS.gene45081.t1 MTR_6g007757 42.353 170 91 2 36 203 92 256 2.17e-32 120
MS.gene45081.t1 MTR_2g007970 32.468 231 154 1 47 275 102 332 4.00e-32 122
MS.gene45081.t1 MTR_3g072520 31.298 262 176 3 36 294 88 348 4.77e-32 122
MS.gene45081.t1 MTR_4g094340 30.705 241 160 2 46 281 31 269 9.53e-32 119
MS.gene45081.t1 MTR_5g025400 31.939 263 161 4 36 281 90 351 1.93e-31 120
MS.gene45081.t1 MTR_5g025370 31.801 261 160 4 36 279 89 348 1.96e-31 120
MS.gene45081.t1 MTR_3g095420 31.102 254 160 4 41 285 93 340 2.06e-31 120
MS.gene45081.t1 MTR_5g025330 31.034 261 164 3 36 281 88 347 4.34e-31 122
MS.gene45081.t1 MTR_4g094340 30.705 241 160 2 46 281 97 335 4.96e-31 119
MS.gene45081.t1 MTR_5g089390 27.969 261 175 3 34 294 91 338 7.42e-31 118
MS.gene45081.t1 MTR_4g094340 30.705 241 160 2 46 281 115 353 9.65e-31 119
MS.gene45081.t1 MTR_5g025340 31.395 258 159 4 36 277 89 344 1.58e-30 118
MS.gene45081.t1 MTR_8g006120 32.051 234 157 2 56 288 110 342 1.71e-30 118
MS.gene45081.t1 MTR_4g094342 30.962 239 158 3 38 270 94 331 2.29e-30 117
MS.gene45081.t1 MTR_4g094362 30.736 231 158 1 47 275 104 334 2.43e-30 117
MS.gene45081.t1 MTR_3g072500 38.286 175 96 3 36 203 99 268 4.62e-30 115
MS.gene45081.t1 MTR_2g016710 32.287 223 139 3 36 253 87 302 6.35e-30 115
MS.gene45081.t1 MTR_4g094360 30.894 246 165 2 34 275 44 288 6.51e-30 116
MS.gene45081.t1 MTR_3g095450 30.677 251 164 3 41 285 91 337 8.02e-30 116
MS.gene45081.t1 MTR_4g094360 30.894 246 165 2 34 275 91 335 1.05e-29 116
MS.gene45081.t1 MTR_8g006090 29.289 239 167 2 56 293 31 268 4.72e-29 112
MS.gene45081.t1 MTR_3g019050 29.362 235 165 1 42 275 103 337 1.02e-28 113
MS.gene45081.t1 MTR_2g102340 32.549 255 162 5 49 294 104 357 1.43e-28 112
MS.gene45081.t1 MTR_5g069040 27.969 261 169 3 42 294 103 352 2.20e-28 112
MS.gene45081.t1 MTR_8g006090 29.289 239 167 2 56 293 111 348 2.48e-28 112
MS.gene45081.t1 MTR_5g025290 29.278 263 162 5 36 279 90 347 4.59e-28 111
MS.gene45081.t1 MTR_5g025290 29.278 263 162 5 36 279 118 375 7.15e-28 111
MS.gene45081.t1 MTR_5g068790 27.413 259 171 3 42 294 103 350 1.84e-27 110
MS.gene45081.t1 MTR_3g112480 27.826 230 153 2 65 281 1 230 1.01e-26 105
MS.gene45081.t1 MTR_1g052205 28.390 236 152 6 67 293 10 237 1.09e-26 105
MS.gene45081.t1 MTR_8g072350 28.958 259 164 4 36 277 88 343 1.10e-26 107
MS.gene45081.t1 MTR_2g007260 31.513 238 154 3 46 275 103 339 3.42e-26 107
MS.gene45081.t1 MTR_1g014790 38.764 178 95 5 23 190 29 202 9.21e-25 99.0
MS.gene45081.t1 MTR_3g095440 29.134 254 164 5 41 285 91 337 4.88e-23 97.4
MS.gene45081.t1 MTR_5g012650 26.891 238 168 3 42 275 93 328 5.56e-23 97.4
MS.gene45081.t1 MTR_8g006050 27.542 236 156 2 42 275 80 302 1.40e-22 96.3
MS.gene45081.t1 MTR_1g074160 32.934 167 99 4 42 202 98 257 2.11e-22 94.4
MS.gene45081.t1 MTR_4g094360 30.357 224 151 2 34 253 91 313 3.10e-22 94.7
MS.gene45081.t1 MTR_4g100840 28.014 282 187 6 15 289 80 352 1.01e-21 94.0
MS.gene45081.t1 MTR_5g021160 29.143 175 122 1 41 213 91 265 5.45e-19 85.1
MS.gene45081.t1 MTR_3g072530 26.923 234 129 6 7 203 68 296 2.47e-18 83.6
MS.gene45081.t1 MTR_3g072500 39.344 122 62 3 36 150 99 215 1.82e-17 79.7
MS.gene45081.t1 MTR_8g006090 26.131 199 145 2 56 253 111 308 2.16e-17 81.3
MS.gene45081.t1 MTR_4g094340 29.412 170 112 3 46 210 97 263 1.30e-12 67.0
MS.gene45081.t1 MTR_4g094340 29.412 170 112 3 46 210 115 281 2.53e-12 66.2
MS.gene45081.t1 MTR_2g102340 31.288 163 110 2 49 210 130 291 5.92e-12 65.5
MS.gene45081.t1 MTR_3g095440 28.655 171 108 4 41 202 91 256 7.64e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45081.t1 AT5G40240 44.318 264 142 2 34 292 96 359 7.14e-69 218
MS.gene45081.t1 AT5G40240 44.318 264 142 2 34 292 96 359 7.14e-69 218
MS.gene45081.t1 AT5G40240 44.318 264 142 2 34 292 110 373 1.34e-68 218
MS.gene45081.t1 AT5G40230 46.304 257 129 3 42 291 105 359 3.77e-67 214
MS.gene45081.t1 AT3G28050 46.888 241 123 2 36 275 90 326 1.86e-66 212
MS.gene45081.t1 AT3G28080 38.768 276 144 5 34 293 1 267 5.58e-58 187
MS.gene45081.t1 AT3G28080 38.768 276 144 5 34 293 1 267 5.58e-58 187
MS.gene45081.t1 AT3G28080 38.768 276 144 5 34 293 1 267 5.58e-58 187
MS.gene45081.t1 AT3G28080 38.768 276 144 5 34 293 1 267 5.58e-58 187
MS.gene45081.t1 AT3G28070 42.379 269 143 6 34 293 1 266 9.71e-58 186
MS.gene45081.t1 AT3G28080 38.849 278 144 6 33 293 80 348 1.24e-57 189
MS.gene45081.t1 AT3G28080 38.849 278 144 6 33 293 88 356 2.15e-57 188
MS.gene45081.t1 AT5G40210 37.855 317 129 5 12 277 17 316 3.18e-57 187
MS.gene45081.t1 AT3G28070 42.435 271 143 7 33 293 91 358 3.44e-57 188
MS.gene45081.t1 AT3G28100 40.467 257 132 5 33 277 88 335 5.75e-56 184
MS.gene45081.t1 AT4G15540 44.583 240 117 3 42 278 101 327 1.39e-55 183
MS.gene45081.t1 AT4G15540 44.583 240 117 3 42 278 101 327 1.39e-55 183
MS.gene45081.t1 AT3G28130 41.923 260 141 6 41 293 10 266 6.37e-55 179
MS.gene45081.t1 AT3G28130 41.923 260 141 6 41 293 10 266 6.37e-55 179
MS.gene45081.t1 AT3G28130 41.923 260 141 6 41 293 96 352 5.36e-54 179
MS.gene45081.t1 AT2G39510 36.992 246 152 3 36 279 86 330 3.66e-45 157
MS.gene45081.t1 AT4G08300 33.466 251 164 2 36 283 89 339 4.24e-45 157
MS.gene45081.t1 AT3G28070 42.291 227 122 6 33 253 91 314 8.56e-45 154
MS.gene45081.t1 AT3G28080 35.565 239 129 5 71 293 1 230 7.21e-44 149
MS.gene45081.t1 AT3G28070 39.224 232 129 6 71 293 1 229 1.71e-43 149
MS.gene45081.t1 AT1G21890 32.946 258 162 2 36 283 89 345 5.08e-43 152
MS.gene45081.t1 AT5G07050 35.294 255 156 4 36 281 96 350 5.09e-42 149
MS.gene45081.t1 AT1G44800 32.271 251 168 2 34 283 87 336 7.01e-42 148
MS.gene45081.t1 AT3G28130 38.696 230 131 6 71 293 1 227 1.10e-41 144
MS.gene45081.t1 AT3G18200 32.927 246 155 3 41 282 118 357 6.32e-41 146
MS.gene45081.t1 AT4G08290 34.454 238 152 2 41 275 96 332 9.60e-41 145
MS.gene45081.t1 AT3G30340 31.395 258 166 2 34 285 87 339 3.79e-39 141
MS.gene45081.t1 AT4G30420 31.915 235 158 2 42 275 86 319 3.96e-39 141
MS.gene45081.t1 AT4G30420 31.915 235 158 2 42 275 96 329 6.06e-39 140
MS.gene45081.t1 AT1G09380 32.530 249 148 2 36 272 86 326 7.26e-39 140
MS.gene45081.t1 AT3G28080 33.455 275 106 5 34 293 1 213 1.12e-38 135
MS.gene45081.t1 AT4G01440 28.968 252 179 0 34 285 86 337 4.21e-38 138
MS.gene45081.t1 AT5G13670 32.114 246 160 4 36 276 86 329 5.37e-38 138
MS.gene45081.t1 AT3G28080 33.574 277 106 6 33 293 88 302 5.62e-38 136
MS.gene45081.t1 AT3G18200 32.189 233 148 3 54 282 1 227 3.58e-37 133
MS.gene45081.t1 AT1G70260 30.888 259 169 4 34 283 91 348 2.18e-36 134
MS.gene45081.t1 AT2G37460 32.245 245 155 4 36 275 93 331 6.62e-36 132
MS.gene45081.t1 AT4G28040 34.711 242 140 6 42 278 94 322 3.18e-35 130
MS.gene45081.t1 AT4G28040 34.711 242 140 6 42 278 94 322 3.18e-35 130
MS.gene45081.t1 AT4G28040 34.711 242 140 6 42 278 94 322 3.18e-35 130
MS.gene45081.t1 AT4G28040 34.711 242 140 6 42 278 94 322 3.18e-35 130
MS.gene45081.t1 AT4G28040 34.711 242 140 6 42 278 94 322 3.18e-35 130
MS.gene45081.t1 AT4G01440 29.075 227 161 0 59 285 3 229 3.97e-35 127
MS.gene45081.t1 AT4G01440 29.075 227 161 0 59 285 3 229 3.97e-35 127
MS.gene45081.t1 AT1G75500 29.688 256 161 3 41 283 103 352 2.00e-34 129
MS.gene45081.t1 AT1G75500 29.688 256 161 3 41 283 103 352 2.00e-34 129
MS.gene45081.t1 AT1G21890 32.900 231 144 2 36 256 89 318 5.68e-34 127
MS.gene45081.t1 AT2G40900 31.174 247 155 4 36 277 89 325 2.01e-33 126
MS.gene45081.t1 AT2G37450 32.932 249 158 3 31 275 61 304 3.83e-32 122
MS.gene45081.t1 AT1G01070 30.279 251 167 4 34 279 45 292 3.00e-31 119
MS.gene45081.t1 AT3G53210 28.685 251 164 3 41 283 36 279 3.53e-31 119
MS.gene45081.t1 AT3G56620 30.802 237 160 3 36 272 89 321 4.53e-31 119
MS.gene45081.t1 AT1G01070 30.279 251 167 4 34 279 92 339 8.58e-31 119
MS.gene45081.t1 AT3G53210 28.685 251 164 3 41 283 93 336 1.21e-30 118
MS.gene45081.t1 AT4G01440 29.148 223 158 0 34 256 86 308 1.25e-30 117
MS.gene45081.t1 AT5G64700 30.172 232 155 3 59 283 109 340 3.87e-30 117
MS.gene45081.t1 AT2G37450 32.906 234 148 3 46 275 4 232 4.74e-30 114
MS.gene45081.t1 AT1G43650 29.167 240 167 2 38 277 87 323 3.09e-29 114
MS.gene45081.t1 AT4G01430 30.315 254 165 6 34 279 85 334 3.17e-29 114
MS.gene45081.t1 AT3G45870 30.081 246 160 2 36 270 90 334 5.01e-29 114
MS.gene45081.t1 AT1G68170 29.839 248 161 2 36 275 81 323 5.98e-28 110
MS.gene45081.t1 AT1G68170 29.839 248 161 2 36 275 91 333 7.16e-28 110
MS.gene45081.t1 AT5G47470 29.577 284 178 7 18 289 91 364 9.82e-28 110
MS.gene45081.t1 AT5G47470 29.577 284 178 7 18 289 119 392 1.26e-27 110
MS.gene45081.t1 AT3G28100 36.022 186 99 4 33 206 88 265 2.41e-27 107
MS.gene45081.t1 AT4G19185 27.799 259 169 4 36 278 21 277 2.51e-27 108
MS.gene45081.t1 AT1G11450 28.099 242 172 2 35 275 1 241 4.32e-27 106
MS.gene45081.t1 AT1G11450 27.984 243 173 2 34 275 41 282 6.04e-27 107
MS.gene45081.t1 AT4G19185 27.799 259 169 4 36 278 99 355 7.54e-27 108
MS.gene45081.t1 AT1G11450 27.984 243 173 2 34 275 48 289 7.75e-27 107
MS.gene45081.t1 AT5G47470 28.782 271 177 5 18 282 119 379 8.39e-27 108
MS.gene45081.t1 AT5G45370 28.571 245 163 3 36 279 98 331 1.29e-26 107
MS.gene45081.t1 AT1G11450 27.984 243 173 2 34 275 92 333 1.37e-26 107
MS.gene45081.t1 AT1G11460 28.745 247 167 6 34 275 92 334 4.22e-26 105
MS.gene45081.t1 AT4G08290 36.747 166 101 2 41 203 96 260 4.59e-26 104
MS.gene45081.t1 AT5G45370 27.799 259 171 4 36 279 98 355 1.12e-25 105
MS.gene45081.t1 AT5G45370 27.799 259 171 4 36 279 98 355 1.12e-25 105
MS.gene45081.t1 AT5G45370 27.559 254 168 4 41 279 1 253 1.56e-25 102
MS.gene45081.t1 AT5G45370 27.559 254 168 4 41 279 1 253 1.56e-25 102
MS.gene45081.t1 AT1G60050 28.077 260 176 4 34 283 92 350 3.41e-25 103
MS.gene45081.t1 AT3G28130 40.606 165 91 4 41 200 96 258 3.93e-25 101
MS.gene45081.t1 AT3G45870 29.004 231 152 2 36 255 90 319 3.75e-24 100
MS.gene45081.t1 AT1G25270 28.870 239 168 1 42 278 87 325 1.68e-23 99.0
MS.gene45081.t1 AT3G30340 33.143 175 110 2 33 203 86 257 4.83e-23 96.3
MS.gene45081.t1 AT4G01430 31.140 228 145 6 34 253 85 308 5.69e-23 96.7
MS.gene45081.t1 AT2G37450 27.985 268 174 5 12 275 13 265 1.84e-21 92.4
MS.gene45081.t1 AT4G01450 28.926 242 168 1 34 275 86 323 2.67e-21 92.8
MS.gene45081.t1 AT1G11450 27.149 221 159 2 34 253 92 311 2.22e-20 89.7
MS.gene45081.t1 AT4G01450 28.636 220 153 1 34 253 86 301 2.52e-20 89.7
MS.gene45081.t1 AT3G45870 27.155 232 147 3 60 270 29 259 3.46e-20 89.0
MS.gene45081.t1 AT4G01440 30.675 163 113 0 41 203 93 255 4.92e-20 87.8
MS.gene45081.t1 AT3G28060 42.017 119 53 4 143 253 44 154 3.91e-19 82.8
MS.gene45081.t1 AT4G24980 27.755 245 128 9 36 278 44 241 6.91e-19 84.7
MS.gene45081.t1 AT3G28100 39.394 132 61 3 33 153 88 211 1.77e-18 83.2
MS.gene45081.t1 AT4G01430 27.861 201 134 5 86 279 1 197 6.00e-18 81.3
MS.gene45081.t1 AT5G45370 25.614 285 186 7 10 279 22 295 6.99e-18 82.8
MS.gene45081.t1 AT4G01450 30.539 167 112 1 34 200 86 248 7.47e-18 81.6
MS.gene45081.t1 AT4G16620 26.437 261 178 4 42 293 97 352 1.01e-17 82.8
MS.gene45081.t1 AT4G16620 26.459 257 175 4 46 293 4 255 1.08e-17 81.3
MS.gene45081.t1 AT4G16620 26.459 257 175 4 46 293 4 255 1.08e-17 81.3
MS.gene45081.t1 AT3G28130 45.833 120 59 3 41 156 96 213 1.70e-17 79.7
MS.gene45081.t1 AT3G53210 29.213 178 110 4 41 209 93 263 4.70e-17 79.3
MS.gene45081.t1 AT3G45870 26.154 195 132 2 70 253 49 242 2.64e-15 74.3
MS.gene45081.t1 AT3G45870 26.154 195 132 2 70 253 49 242 2.64e-15 74.3
MS.gene45081.t1 AT3G45870 29.121 182 116 3 36 206 90 269 8.48e-15 73.6
MS.gene45081.t1 AT4G01450 32.800 125 80 1 34 158 86 206 1.83e-14 72.0
MS.gene45081.t1 AT3G45870 28.873 142 100 1 129 270 43 183 7.47e-14 70.1
MS.gene45081.t1 AT5G64700 30.464 151 98 3 59 202 109 259 7.68e-13 67.4
MS.gene45081.t1 AT1G43650 28.571 175 122 2 38 212 87 258 4.34e-12 65.5

Find 67 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGGGAAATTCAAAAGTT+TGG 0.240714 5.3:+23871918 MS.gene45081:CDS
ATATACAGACTTGGATTATA+AGG 0.260755 5.3:+23871816 MS.gene45081:intron
AGTCGCCTAGGCATCTATTT+TGG 0.261433 5.3:-23872932 None:intergenic
AGCAGCCAAGCTAAAATTAT+TGG 0.272674 5.3:+23871463 MS.gene45081:CDS
GCCTTTCAAAATATAGATAT+TGG 0.274960 5.3:+23871553 MS.gene45081:CDS
GAGTGTTACCACCCACTTCT+AGG 0.278870 5.3:-23870365 None:intergenic
CTTGTTACCACTAGCTCTTC+AGG 0.295870 5.3:-23871845 None:intergenic
GGCACAGTGGTCTCTATTGC+AGG 0.308068 5.3:+23871484 MS.gene45081:CDS
ACTTATTGTTGCAGCATGAT+TGG 0.348960 5.3:+23872811 MS.gene45081:intron
TTAACTGTGACATTATATAA+AGG 0.353485 5.3:+23871511 MS.gene45081:CDS
TCATACTTGCTTTAATTTCA+AGG 0.356799 5.3:+23870829 MS.gene45081:CDS
GTTAAATCAGATTGGATAGT+TGG 0.366365 5.3:+23871598 MS.gene45081:CDS
TTGAACATAGCTACATATAT+TGG 0.366626 5.3:-23872620 None:intergenic
TTTGGATTCTCAGACCTGAT+AGG 0.386129 5.3:+23871936 MS.gene45081:CDS
ACCTTTCAGTTAAATCAGAT+TGG 0.389374 5.3:+23871590 MS.gene45081:CDS
CATATATTGGTCCTTTCTTA+CGG 0.398364 5.3:-23872607 None:intergenic
TATACAGACTTGGATTATAA+GGG 0.407066 5.3:+23871817 MS.gene45081:intron
AATATAGATATTGGAGGAAG+TGG 0.416383 5.3:+23871562 MS.gene45081:CDS
TTAGGAGACAGTCTTTATCT+TGG 0.419263 5.3:+23872686 MS.gene45081:CDS
TGAAAGGCATTACTAATCAA+TGG 0.420676 5.3:-23871538 None:intergenic
ATCAAATCAGCCACCAATGA+TGG 0.421771 5.3:+23870390 MS.gene45081:CDS
ACAGCTACCAACTCCCTATC+AGG 0.429577 5.3:-23871950 None:intergenic
AGTGCAATGACCATTCCTAA+TGG 0.441266 5.3:-23872644 None:intergenic
ATGGTCATTGCACTTGGCAT+GGG 0.447042 5.3:+23872653 MS.gene45081:CDS
GTGCAATGACCATTCCTAAT+GGG 0.462955 5.3:-23872643 None:intergenic
TAACTGTGACATTATATAAA+GGG 0.467351 5.3:+23871512 MS.gene45081:CDS
TTATGCTGTTATGTGGGCAC+AGG 0.468522 5.3:+23872858 MS.gene45081:CDS
GTAGCTATGTTCAACCCATT+AGG 0.469889 5.3:+23872629 MS.gene45081:CDS
AATGGTCATTGCACTTGGCA+TGG 0.477969 5.3:+23872652 MS.gene45081:CDS
GCAAGTATGAAGGTAAAAGC+AGG 0.494725 5.3:-23870816 None:intergenic
TTGGATTCTCAGACCTGATA+GGG 0.506332 5.3:+23871937 MS.gene45081:CDS
TGCAGTTCAATTCCTAGAAG+TGG 0.506993 5.3:+23870353 MS.gene45081:CDS
GGAGCTGCTATAATAGCCAT+TGG 0.524019 5.3:+23872832 MS.gene45081:CDS
TGAAATTAAAGCAAGTATGA+AGG 0.529601 5.3:-23870826 None:intergenic
TTAGGAATGGTCATTGCACT+TGG 0.530569 5.3:+23872647 MS.gene45081:CDS
GAGACAGTCTTTATCTTGGA+AGG 0.531920 5.3:+23872690 MS.gene45081:CDS
ACATGGGCATTCCGTAAGAA+AGG 0.551083 5.3:+23872596 MS.gene45081:CDS
TGGTCATTGCACTTGGCATG+GGG 0.551730 5.3:+23872654 MS.gene45081:CDS
TTTCAAAATATAGATATTGG+AGG 0.562558 5.3:+23871556 MS.gene45081:CDS
AATACTCATTCCATCATTGG+TGG 0.565236 5.3:-23870400 None:intergenic
GCACAGTGGTCTCTATTGCA+GGG 0.571242 5.3:+23871485 MS.gene45081:CDS
TGAAGGTAAAAGCAGGGAGA+AGG 0.572430 5.3:-23870809 None:intergenic
TCCAATCTGATTTAACTGAA+AGG 0.573414 5.3:-23871591 None:intergenic
GCAGTTCAATTCCTAGAAGT+GGG 0.574665 5.3:+23870354 MS.gene45081:CDS
AGCATAGCAGATGCTAGTGT+GGG 0.575963 5.3:-23870783 None:intergenic
GTCAACCAAAATAGATGCCT+AGG 0.576691 5.3:+23872927 MS.gene45081:CDS
AAGCATAGCAGATGCTAGTG+TGG 0.579129 5.3:-23870784 None:intergenic
GGACAATATACAAAACAGAA+AGG 0.582580 5.3:-23871651 None:intergenic
CACAGTGGTCTCTATTGCAG+GGG 0.584216 5.3:+23871486 MS.gene45081:CDS
CAAGTATGAAGGTAAAAGCA+GGG 0.587024 5.3:-23870815 None:intergenic
TCTCAGACCTGATAGGGAGT+TGG 0.589811 5.3:+23871943 MS.gene45081:CDS
TATGTTCAACCCATTAGGAA+TGG 0.601626 5.3:+23872634 MS.gene45081:CDS
TGAGGAGTGTTGTATACACA+TGG 0.602238 5.3:+23872579 MS.gene45081:CDS
AGCAAGTGTAACAGCAACAA+TGG 0.605117 5.3:+23870329 MS.gene45081:CDS
CATAACAGCATAAAATCCAA+TGG 0.605333 5.3:-23872848 None:intergenic
GGATTATCCTGAAGAGCTAG+TGG 0.609543 5.3:+23871838 MS.gene45081:CDS
TATGTGGGCACAGGCTCAAG+AGG 0.617968 5.3:+23872867 MS.gene45081:CDS
TCATTTATAGGCAATTTGTG+TGG 0.623525 5.3:+23872550 MS.gene45081:intron
ATTGTAGCTCTCATTGCAGA+GGG 0.632720 5.3:+23871902 MS.gene45081:CDS
AACAAGCATTTGTTGCAGCA+TGG 0.633651 5.3:+23871862 MS.gene45081:CDS
GGTCATTGCACTTGGCATGG+GGG 0.659646 5.3:+23872655 MS.gene45081:CDS
AATTGTAGCTCTCATTGCAG+AGG 0.661606 5.3:+23871901 MS.gene45081:CDS
CAATTTGTGTGGTATCAATG+AGG 0.677875 5.3:+23872561 MS.gene45081:CDS
AAGCATTTGTTGCAGCATGG+TGG 0.684295 5.3:+23871865 MS.gene45081:CDS
AGCTAAAATTATTGGCACAG+TGG 0.687016 5.3:+23871471 MS.gene45081:CDS
GTTCAATTCCTAGAAGTGGG+TGG 0.702602 5.3:+23870357 MS.gene45081:CDS
GAGGAGTGTTGTATACACAT+GGG 0.704060 5.3:+23872580 MS.gene45081:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACAGAAAAATAATT+TGG + chr5.3:23871388-23871407 MS.gene45081:intron 10.0%
!!! TTAGATTATTTCTAATAAAT+TGG - chr5.3:23872744-23872763 None:intergenic 10.0%
!! AAAAATTCTACATAAAATTG+AGG - chr5.3:23870523-23870542 None:intergenic 15.0%
!! TATGAATTTAGTTGTATAAA+AGG + chr5.3:23870656-23870675 MS.gene45081:intron 15.0%
!! TTAAAATGAAAATGTTAGTA+TGG - chr5.3:23872781-23872800 None:intergenic 15.0%
!!! ACAAAAATTCCTTTTAAAAA+GGG - chr5.3:23871203-23871222 None:intergenic 15.0%
!!! ATAAACCTTTATTTGAATAA+AGG + chr5.3:23872428-23872447 MS.gene45081:intron 15.0%
!!! TACAAAAATTCCTTTTAAAA+AGG - chr5.3:23871204-23871223 None:intergenic 15.0%
!!! TACAATATTTTTTATACAAG+AGG - chr5.3:23872097-23872116 None:intergenic 15.0%
!!! TCAAAGTAAATATTTTTGTA+TGG + chr5.3:23870632-23870651 MS.gene45081:intron 15.0%
!! AGGAAATTTATGTGAAAATT+TGG + chr5.3:23870676-23870695 MS.gene45081:intron 20.0%
!! GAATTATAATTTAACCAATG+TGG + chr5.3:23872511-23872530 MS.gene45081:intron 20.0%
!! GATATATTTCAATCATTGTT+TGG + chr5.3:23871322-23871341 MS.gene45081:intron 20.0%
!! TAACTGTGACATTATATAAA+GGG + chr5.3:23871512-23871531 MS.gene45081:CDS 20.0%
!! TCTTATCATGTTGATATTTA+TGG + chr5.3:23872249-23872268 MS.gene45081:intron 20.0%
!! TTAACTGTGACATTATATAA+AGG + chr5.3:23871511-23871530 MS.gene45081:CDS 20.0%
!! TTCAAAAAGATTTATTTACC+TGG - chr5.3:23871675-23871694 None:intergenic 20.0%
!! TTTCAAAATATAGATATTGG+AGG + chr5.3:23871556-23871575 MS.gene45081:CDS 20.0%
!!! AACAAAATCATCAATTTTTC+AGG - chr5.3:23871173-23871192 None:intergenic 20.0%
!!! ACAAAATCATCAATTTTTCA+GGG - chr5.3:23871172-23871191 None:intergenic 20.0%
!!! ATGCATTACAACTTTAAAAT+CGG + chr5.3:23872481-23872500 MS.gene45081:intron 20.0%
!!! ATTTTTCTGTTTTTTTTGCA+AGG - chr5.3:23871384-23871403 None:intergenic 20.0%
!!! CAAAAATTCCTTTTAAAAAG+GGG - chr5.3:23871202-23871221 None:intergenic 20.0%
!!! GGCATTGATATTTTTAAAAA+TGG + chr5.3:23871734-23871753 MS.gene45081:intron 20.0%
!!! GTAAAAATTTTAATGTCACT+TGG + chr5.3:23870975-23870994 MS.gene45081:intron 20.0%
!!! TCCAATATCTATATTTTGAA+AGG - chr5.3:23871557-23871576 None:intergenic 20.0%
!!! TCTTTTTCTATGGTAAAAAA+AGG - chr5.3:23870481-23870500 None:intergenic 20.0%
!!! TTTTTAAACCCCTTTTTAAA+AGG + chr5.3:23871191-23871210 MS.gene45081:intron 20.0%
! AAAAATACTCATTCCATCAT+TGG - chr5.3:23870406-23870425 None:intergenic 25.0%
! AAATCATAGATGTTAGTTGA+AGG + chr5.3:23870920-23870939 MS.gene45081:intron 25.0%
! ACATGATAAGATATGATTAG+AGG - chr5.3:23872240-23872259 None:intergenic 25.0%
! AGGTTTATGTTCAAATATTG+TGG - chr5.3:23872416-23872435 None:intergenic 25.0%
! ATATACAGACTTGGATTATA+AGG + chr5.3:23871816-23871835 MS.gene45081:intron 25.0%
! ATTGTGGATGAAAAAAATGT+TGG - chr5.3:23872400-23872419 None:intergenic 25.0%
! CATAAAATTGAGGATGAAAT+TGG - chr5.3:23870513-23870532 None:intergenic 25.0%
! GCCTTTCAAAATATAGATAT+TGG + chr5.3:23871553-23871572 MS.gene45081:CDS 25.0%
! TATAATCCAAGTCTGTATAT+AGG - chr5.3:23871816-23871835 None:intergenic 25.0%
! TATACAGACTTGGATTATAA+GGG + chr5.3:23871817-23871836 MS.gene45081:intron 25.0%
! TCAACTAACATCTATGATTT+GGG - chr5.3:23870920-23870939 None:intergenic 25.0%
! TGAAATTAAAGCAAGTATGA+AGG - chr5.3:23870829-23870848 None:intergenic 25.0%
! TGATGCCTTTATTCAAATAA+AGG - chr5.3:23872436-23872455 None:intergenic 25.0%
! TTCAACTAACATCTATGATT+TGG - chr5.3:23870921-23870940 None:intergenic 25.0%
! TTGAACATAGCTACATATAT+TGG - chr5.3:23872623-23872642 None:intergenic 25.0%
!! ATAAAATTTGTTCATACCTG+AGG - chr5.3:23870557-23870576 None:intergenic 25.0%
!! TCATACTTGCTTTAATTTCA+AGG + chr5.3:23870829-23870848 MS.gene45081:CDS 25.0%
!! TTTTTGCAAGGATTAAAGAA+GGG - chr5.3:23871372-23871391 None:intergenic 25.0%
!!! ACATATATAGAGTTTTGGAA+AGG - chr5.3:23872155-23872174 None:intergenic 25.0%
!!! CATATATAGAGTTTTGGAAA+GGG - chr5.3:23872154-23872173 None:intergenic 25.0%
!!! GTGTCATTAATGGTTTTATA+CGG + chr5.3:23872213-23872232 MS.gene45081:intron 25.0%
!!! TTTTTTGCAAGGATTAAAGA+AGG - chr5.3:23871373-23871392 None:intergenic 25.0%
AAAATTGAGGATGAAATTGG+AGG - chr5.3:23870510-23870529 None:intergenic 30.0%
AAAGGAAACATAGAGCAAAA+AGG - chr5.3:23870449-23870468 None:intergenic 30.0%
AATATAGATATTGGAGGAAG+TGG + chr5.3:23871562-23871581 MS.gene45081:CDS 30.0%
AATGACACTGCATAGAAAAA+GGG - chr5.3:23872201-23872220 None:intergenic 30.0%
ACCTTTCAGTTAAATCAGAT+TGG + chr5.3:23871590-23871609 MS.gene45081:CDS 30.0%
ATTGCGTACAATACACAAAA+TGG + chr5.3:23872123-23872142 MS.gene45081:intron 30.0%
CATAACAGCATAAAATCCAA+TGG - chr5.3:23872851-23872870 None:intergenic 30.0%
CATATATTGGTCCTTTCTTA+CGG - chr5.3:23872610-23872629 None:intergenic 30.0%
GAAAATTGTGTTCAATGTGA+AGG + chr5.3:23871006-23871025 MS.gene45081:intron 30.0%
GGACAATATACAAAACAGAA+AGG - chr5.3:23871654-23871673 None:intergenic 30.0%
GTTAAATCAGATTGGATAGT+TGG + chr5.3:23871598-23871617 MS.gene45081:CDS 30.0%
TAATGACACTGCATAGAAAA+AGG - chr5.3:23872202-23872221 None:intergenic 30.0%
TAATTTAACCAATGTGGAGA+CGG + chr5.3:23872517-23872536 MS.gene45081:intron 30.0%
TCATTTATAGGCAATTTGTG+TGG + chr5.3:23872550-23872569 MS.gene45081:intron 30.0%
TCCAATCTGATTTAACTGAA+AGG - chr5.3:23871594-23871613 None:intergenic 30.0%
TTGTATGCAATGTCATTGAA+AGG + chr5.3:23872046-23872065 MS.gene45081:intron 30.0%
! AAAAAAAGGTGCATGGTAAA+AGG - chr5.3:23870467-23870486 None:intergenic 30.0%
! CTCTCACATATATAGAGTTT+TGG - chr5.3:23872160-23872179 None:intergenic 30.0%
! TGGATTTTATGCTGTTATGT+GGG + chr5.3:23872852-23872871 MS.gene45081:CDS 30.0%
! TTCTGTTTTGTATATTGTCC+AGG + chr5.3:23871654-23871673 MS.gene45081:CDS 30.0%
! TTGGATTTTATGCTGTTATG+TGG + chr5.3:23872851-23872870 MS.gene45081:CDS 30.0%
! TTTCTATGCAGTGTCATTAA+TGG + chr5.3:23872203-23872222 MS.gene45081:intron 30.0%
! TTTTCCAGTAGAACTACAAA+TGG - chr5.3:23871280-23871299 None:intergenic 30.0%
!! GTGCAGATTTTAACGAATAT+TGG + chr5.3:23870744-23870763 MS.gene45081:intron 30.0%
!! TGAAAGGCATTACTAATCAA+TGG - chr5.3:23871541-23871560 None:intergenic 30.0%
AATACTCATTCCATCATTGG+TGG - chr5.3:23870403-23870422 None:intergenic 35.0%
AATCCAAGTCTGTATATAGG+TGG - chr5.3:23871813-23871832 None:intergenic 35.0%
ACCAAATACAATTGCCACAT+CGG - chr5.3:23870957-23870976 None:intergenic 35.0%
ACTTATTGTTGCAGCATGAT+TGG + chr5.3:23872811-23872830 MS.gene45081:intron 35.0%
AGCAGCCAAGCTAAAATTAT+TGG + chr5.3:23871463-23871482 MS.gene45081:CDS 35.0%
AGCTAAAATTATTGGCACAG+TGG + chr5.3:23871471-23871490 MS.gene45081:CDS 35.0%
CAAGTATGAAGGTAAAAGCA+GGG - chr5.3:23870818-23870837 None:intergenic 35.0%
CAATGTCATTGAAAGGTCAA+TGG + chr5.3:23872053-23872072 MS.gene45081:intron 35.0%
CAATTTGTGTGGTATCAATG+AGG + chr5.3:23872561-23872580 MS.gene45081:CDS 35.0%
CAGAGGGAAATTCAAAAGTT+TGG + chr5.3:23871918-23871937 MS.gene45081:CDS 35.0%
CGTACAATACACAAAATGGT+AGG + chr5.3:23872127-23872146 MS.gene45081:intron 35.0%
TATGTTCAACCCATTAGGAA+TGG + chr5.3:23872634-23872653 MS.gene45081:CDS 35.0%
TTAGGAGACAGTCTTTATCT+TGG + chr5.3:23872686-23872705 MS.gene45081:CDS 35.0%
TTTCCACCTATATACAGACT+TGG + chr5.3:23871807-23871826 MS.gene45081:intron 35.0%
! ATTTTCTCCTTCAAATCCTC+CGG + chr5.3:23870598-23870617 MS.gene45081:intron 35.0%
! CTATGGTAAAAAAAGGTGCA+TGG - chr5.3:23870474-23870493 None:intergenic 35.0%
! GGTGTGGTTGTTTCATTTAT+AGG + chr5.3:23872538-23872557 MS.gene45081:intron 35.0%
! TATGCCATTTGTAGTTCTAC+TGG + chr5.3:23871273-23871292 MS.gene45081:intron 35.0%
! TTTTTCTTCTTAGTTGCCTC+AGG + chr5.3:23870538-23870557 MS.gene45081:intron 35.0%
!! TAAATTCCCAATTTGCTGCA+AGG - chr5.3:23871774-23871793 None:intergenic 35.0%
!!! CTGTGCCAATAATTTTAGCT+TGG - chr5.3:23871471-23871490 None:intergenic 35.0%
!!! TAATTTTAGCTTGGCTGCTA+TGG - chr5.3:23871462-23871481 None:intergenic 35.0%
AATTGTAGCTCTCATTGCAG+AGG + chr5.3:23871901-23871920 MS.gene45081:CDS 40.0%
AGCAAGTGTAACAGCAACAA+TGG + chr5.3:23870329-23870348 MS.gene45081:CDS 40.0%
AGGTCTAATCATATCCGATG+TGG + chr5.3:23870940-23870959 MS.gene45081:intron 40.0%
AGTGCAATGACCATTCCTAA+TGG - chr5.3:23872647-23872666 None:intergenic 40.0%
ATCAAATCAGCCACCAATGA+TGG + chr5.3:23870390-23870409 MS.gene45081:CDS 40.0%
ATTGAGGATGAAATTGGAGG+AGG - chr5.3:23870507-23870526 None:intergenic 40.0%
ATTGTAGCTCTCATTGCAGA+GGG + chr5.3:23871902-23871921 MS.gene45081:CDS 40.0%
CACTTACCTTGCAGCAAATT+GGG + chr5.3:23871765-23871784 MS.gene45081:intron 40.0%
CATTGAAAGGTCAATGGTTC+AGG + chr5.3:23872059-23872078 MS.gene45081:intron 40.0%
GAGACAGTCTTTATCTTGGA+AGG + chr5.3:23872690-23872709 MS.gene45081:CDS 40.0%
GCAAGTATGAAGGTAAAAGC+AGG - chr5.3:23870819-23870838 None:intergenic 40.0%
GCAGTTCAATTCCTAGAAGT+GGG + chr5.3:23870354-23870373 MS.gene45081:CDS 40.0%
GTAGCTATGTTCAACCCATT+AGG + chr5.3:23872629-23872648 MS.gene45081:CDS 40.0%
GTGCAATGACCATTCCTAAT+GGG - chr5.3:23872646-23872665 None:intergenic 40.0%
TACTTTGACAACGATAGAGC+CGG - chr5.3:23870620-23870639 None:intergenic 40.0%
TCCGATGTGGCAATTGTATT+TGG + chr5.3:23870953-23870972 MS.gene45081:intron 40.0%
TGATCACATTGTGCACTTTC+AGG + chr5.3:23871413-23871432 MS.gene45081:intron 40.0%
TGCAGTTCAATTCCTAGAAG+TGG + chr5.3:23870353-23870372 MS.gene45081:CDS 40.0%
TGCATAGAAAAAGGGCAACA+TGG - chr5.3:23872193-23872212 None:intergenic 40.0%
TTAGGAATGGTCATTGCACT+TGG + chr5.3:23872647-23872666 MS.gene45081:CDS 40.0%
TTGGATTCTCAGACCTGATA+GGG + chr5.3:23871937-23871956 MS.gene45081:CDS 40.0%
TTTGGATTCTCAGACCTGAT+AGG + chr5.3:23871936-23871955 MS.gene45081:CDS 40.0%
! AACAAGCATTTGTTGCAGCA+TGG + chr5.3:23871862-23871881 MS.gene45081:CDS 40.0%
! GAGGAGGAGATCTTTTTCTA+TGG - chr5.3:23870491-23870510 None:intergenic 40.0%
! GGCATGGGGGTAATATTTTT+AGG + chr5.3:23872668-23872687 MS.gene45081:CDS 40.0%
!! GAGGAGTGTTGTATACACAT+GGG + chr5.3:23872580-23872599 MS.gene45081:CDS 40.0%
!! TGAGGAGTGTTGTATACACA+TGG + chr5.3:23872579-23872598 MS.gene45081:CDS 40.0%
!!! CTATTTTGGTTGACAGCAGA+GGG - chr5.3:23872921-23872940 None:intergenic 40.0%
!!! TATTTTGGTTGACAGCAGAG+GGG - chr5.3:23872920-23872939 None:intergenic 40.0%
!!! TCTATTTTGGTTGACAGCAG+AGG - chr5.3:23872922-23872941 None:intergenic 40.0%
AAGCATAGCAGATGCTAGTG+TGG - chr5.3:23870787-23870806 None:intergenic 45.0%
AATGGTCATTGCACTTGGCA+TGG + chr5.3:23872652-23872671 MS.gene45081:CDS 45.0%
ACATGGGCATTCCGTAAGAA+AGG + chr5.3:23872596-23872615 MS.gene45081:CDS 45.0%
AGCATAGCAGATGCTAGTGT+GGG - chr5.3:23870786-23870805 None:intergenic 45.0%
ATGGTCATTGCACTTGGCAT+GGG + chr5.3:23872653-23872672 MS.gene45081:CDS 45.0%
CACATTGTGCACTTTCAGGA+TGG + chr5.3:23871417-23871436 MS.gene45081:intron 45.0%
GATTGATCTTGAGCTACCTG+TGG + chr5.3:23870706-23870725 MS.gene45081:intron 45.0%
GCACTTACCTTGCAGCAAAT+TGG + chr5.3:23871764-23871783 MS.gene45081:intron 45.0%
GGAGCTGCTATAATAGCCAT+TGG + chr5.3:23872832-23872851 MS.gene45081:CDS 45.0%
GGATTATCCTGAAGAGCTAG+TGG + chr5.3:23871838-23871857 MS.gene45081:CDS 45.0%
GTTCAATTCCTAGAAGTGGG+TGG + chr5.3:23870357-23870376 MS.gene45081:CDS 45.0%
TGAAGGTAAAAGCAGGGAGA+AGG - chr5.3:23870812-23870831 None:intergenic 45.0%
TTATGCTGTTATGTGGGCAC+AGG + chr5.3:23872858-23872877 MS.gene45081:CDS 45.0%
! AAGCATTTGTTGCAGCATGG+TGG + chr5.3:23871865-23871884 MS.gene45081:CDS 45.0%
! CTTGTTACCACTAGCTCTTC+AGG - chr5.3:23871848-23871867 None:intergenic 45.0%
!!! ATTTTGGTTGACAGCAGAGG+GGG - chr5.3:23872919-23872938 None:intergenic 45.0%
!! AATAAATATTATTATGTATA+TGG + chr5.3:23871095-23871114 MS.gene45081:intron 5.0%
AAGGTCAATGGTTCAGGTCG+TGG + chr5.3:23872065-23872084 MS.gene45081:intron 50.0%
ACAGCTACCAACTCCCTATC+AGG - chr5.3:23871953-23871972 None:intergenic 50.0%
CACAGTGGTCTCTATTGCAG+GGG + chr5.3:23871486-23871505 MS.gene45081:CDS 50.0%
GAGTGTTACCACCCACTTCT+AGG - chr5.3:23870368-23870387 None:intergenic 50.0%
GATAGAGCCGGAGGATTTGA+AGG - chr5.3:23870608-23870627 None:intergenic 50.0%
GCACAGTGGTCTCTATTGCA+GGG + chr5.3:23871485-23871504 MS.gene45081:CDS 50.0%
TAACCAATGTGGAGACGGTG+TGG + chr5.3:23872522-23872541 MS.gene45081:intron 50.0%
TCTCAGACCTGATAGGGAGT+TGG + chr5.3:23871943-23871962 MS.gene45081:CDS 50.0%
TGGTCATTGCACTTGGCATG+GGG + chr5.3:23872654-23872673 MS.gene45081:CDS 50.0%
TTCTATGCGCGCAACTGTAG+AGG + chr5.3:23871713-23871732 MS.gene45081:intron 50.0%
TTTGACAACGATAGAGCCGG+AGG - chr5.3:23870617-23870636 None:intergenic 50.0%
CAACCACACCGTCTCCACAT+TGG - chr5.3:23872528-23872547 None:intergenic 55.0%
CTGCAGTACTGCACAACCAC+AGG - chr5.3:23870725-23870744 None:intergenic 55.0%
GGCACAGTGGTCTCTATTGC+AGG + chr5.3:23871484-23871503 MS.gene45081:CDS 55.0%
GGTCATTGCACTTGGCATGG+GGG + chr5.3:23872655-23872674 MS.gene45081:CDS 55.0%
TATGTGGGCACAGGCTCAAG+AGG + chr5.3:23872867-23872886 MS.gene45081:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 23870315 23872948 23870315 ID=MS.gene45081
chr5.3 mRNA 23870315 23872948 23870315 ID=MS.gene45081.t1;Parent=MS.gene45081
chr5.3 exon 23870315 23870417 23870315 ID=MS.gene45081.t1.exon1;Parent=MS.gene45081.t1
chr5.3 CDS 23870315 23870417 23870315 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
chr5.3 exon 23870745 23870850 23870745 ID=MS.gene45081.t1.exon2;Parent=MS.gene45081.t1
chr5.3 CDS 23870745 23870850 23870745 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
chr5.3 exon 23871435 23871675 23871435 ID=MS.gene45081.t1.exon3;Parent=MS.gene45081.t1
chr5.3 CDS 23871435 23871675 23871435 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
chr5.3 exon 23871824 23871982 23871824 ID=MS.gene45081.t1.exon4;Parent=MS.gene45081.t1
chr5.3 CDS 23871824 23871982 23871824 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
chr5.3 exon 23872560 23872711 23872560 ID=MS.gene45081.t1.exon5;Parent=MS.gene45081.t1
chr5.3 CDS 23872560 23872711 23872560 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
chr5.3 exon 23872825 23872948 23872825 ID=MS.gene45081.t1.exon6;Parent=MS.gene45081.t1
chr5.3 CDS 23872825 23872948 23872825 ID=cds.MS.gene45081.t1;Parent=MS.gene45081.t1
Gene Sequence

>MS.gene45081

ATGGTGATCGAAGGAGCAAGTGTAACAGCAACAATGGTTGCAGTTCAATTCCTAGAAGTGGGTGGTAACACTCTGATCAAATCAGCCACCAATGATGGAATGAGTATTTTTGTTTTCACTTTTTACTCAAACCTTTTTGCTCTATGTTTCCTTTTACCATGCACCTTTTTTTACCATAGAAAAAGATCTCCTCCTCCAATTTCATCCTCAATTTTATGTAGAATTTTTCTTCTTAGTTGCCTCAGGTATGAACAAATTTTATGTAATCAGTTGTTATGTTAGTATTTTCTCCTTCAAATCCTCCGGCTCTATCGTTGTCAAAGTAAATATTTTTGTATGGATATGAATTTAGTTGTATAAAAGGAAATTTATGTGAAAATTTGGAATGTTTGATTGATCTTGAGCTACCTGTGGTTGTGCAGTACTGCAGTGCAGATTTTAACGAATATTGGAATTGAATGTAGCTCTCCCACACTAGCATCTGCTATGCTTGACCTTCTCCCTGCTTTTACCTTCATACTTGCTTTAATTTCAAGGTTTGACTTATTTTATTTATTCTCTATTTACGTGTAATTTACGAGTTGTGAAATTTTGAAGTTAAACCCAAATCATAGATGTTAGTTGAAGGTCTAATCATATCCGATGTGGCAATTGTATTTGGTAAAAATTTTAATGTCACTTGGATGAAAAAGAAAATTGTGTTCAATGTGAAGGACATTCAATAAAAGTTAGATGAAAAAAAAAGAAAAAGTTAGATGTGTAAATTATTTAACTTCAATTAATAAATATTATTATGTATATGGAAATAAAAGCATAAATAATTAATAAAAAAAATTATTTTATATAGTTTTAGTCCCTGAAAAATTGATGATTTTGTTTTTAAACCCCTTTTTAAAAGGAATTTTTGTATACAAATTTTAAAATATAGCATTTTTTTTTTCTAATAGTTTTTCAAATATATGCCATTTGTAGTTCTACTGGAAAATATCAAAGAGTGACTTAAAAATGATATATTTCAATCATTGTTTGGTCAAGTACTAACATAATTTAATTACCCTTCTTTAATCCTTGCAAAAAAAACAGAAAAATAATTTGGCATGATCACATTGTGCACTTTCAGGATGGAAAATCTAAATATCAAACACCATAGCAGCCAAGCTAAAATTATTGGCACAGTGGTCTCTATTGCAGGGGCATTAACTGTGACATTATATAAAGGGATACCATTGATTAGTAATGCCTTTCAAAATATAGATATTGGAGGAAGTGGAATTCACCTTTCAGTTAAATCAGATTGGATAGTTGGTGCTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCTGTTTTGTATATTGTCCAGGTAAATAAATCTTTTTGAATATTGCGCAACGAAAGCATTCTATGCGCGCAACTGTAGAGGCATTGATATTTTTAAAAATGGCATCATTGCACTTACCTTGCAGCAAATTGGGAATTTATATAATTTTTCTTTTTCCACCTATATACAGACTTGGATTATAAGGGATTATCCTGAAGAGCTAGTGGTAACAAGCATTTGTTGCAGCATGGTGGTAATTCTATCTGCAATTGTAGCTCTCATTGCAGAGGGAAATTCAAAAGTTTGGATTCTCAGACCTGATAGGGAGTTGGTAGCTGTGTGTTATTCAGTAAGTACAAACTTTATTGTTTTTAAGAAAATTAAGAACATATTAAAATAAAATAAATTTAATTTGTATGCAATGTCATTGAAAGGTCAATGGTTCAGGTCGTGGAATCAGCCTCTTGTATAAAAAATATTGTAAGATAGATTGCGTACAATACACAAAATGGTAGGACCCTTTCCAAAACTCTATATATGTGAGAGTTTTAGTGCACCATGTTGCCCTTTTTCTATGCAGTGTCATTAATGGTTTTATACGGACCTCTAATCATATCTTATCATGTTGATATTTATGGAGATATATGAGAAAGTAATATAATGAACATATGATGATGTAATTTGATTTGATGCATGTGTTAAACAGTTGTACATTGTCGTTGCATAGATGTTAATCTCTTAAGAATAAAGTGTTTTTTTTTAACCAACATTTTTTTCATCCACAATATTTGAACATAAACCTTTATTTGAATAAAGGCATCAAATCTTTTTTTTTTTTTGACAAGAAATGCATTACAACTTTAAAATCGGTATTTATGAATTATAATTTAACCAATGTGGAGACGGTGTGGTTGTTTCATTTATAGGCAATTTGTGTGGTATCAATGAGGAGTGTTGTATACACATGGGCATTCCGTAAGAAAGGACCAATATATGTAGCTATGTTCAACCCATTAGGAATGGTCATTGCACTTGGCATGGGGGTAATATTTTTAGGAGACAGTCTTTATCTTGGAAGGTAAATAAATTCATTTCATTAAAAAACAACCAATTTATTAGAAATAATCTAAATGATGTATTAATTCCATACTAACATTTTCATTTTAAAATTTGTTTTACTTATTGTTGCAGCATGATTGGAGCTGCTATAATAGCCATTGGATTTTATGCTGTTATGTGGGCACAGGCTCAAGAGGAAAACACAACATGTGAAAATAAATTTCCCCCTCTGCTGTCAACCAAAATAGATGCCTAG
Protein sequence

>MS.gene45081.t1

MVIEGASVTATMVAVQFLEVGGNTLIKSATNDGMMQILTNIGIECSSPTLASAMLDLLPAFTFILALISRMENLNIKHHSSQAKIIGTVVSIAGALTVTLYKGIPLISNAFQNIDIGGSGIHLSVKSDWIVGAFLLATASFCLSVLYIVQTWIIRDYPEELVVTSICCSMVVILSAIVALIAEGNSKVWILRPDRELVAVCYSAICVVSMRSVVYTWAFRKKGPIYVAMFNPLGMVIALGMGVIFLGDSLYLGSMIGAAIIAIGFYAVMWAQAQEENTTCENKFPPLLSTKIDA