Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060076.t1 | XP_013447979.1 | 99.4 | 154 | 1 | 0 | 1 | 154 | 436 | 589 | 3.60E-78 | 300.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060076.t1 | A0A072TXV1 | 99.4 | 154 | 1 | 0 | 1 | 154 | 436 | 589 | 2.6e-78 | 300.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050521 | MS.gene060076 | 0.801187 | 1.01E-48 | -1.69E-46 |
MS.gene050894 | MS.gene060076 | 0.813904 | 2.02E-51 | -1.69E-46 |
MS.gene055251 | MS.gene060076 | 0.863517 | 2.35E-64 | -1.69E-46 |
MS.gene05589 | MS.gene060076 | -0.815141 | 1.08E-51 | -1.69E-46 |
MS.gene055942 | MS.gene060076 | 0.802115 | 6.54E-49 | -1.69E-46 |
MS.gene056266 | MS.gene060076 | -0.820631 | 6.19E-53 | -1.69E-46 |
MS.gene058015 | MS.gene060076 | 0.812502 | 4.10E-51 | -1.69E-46 |
MS.gene060076 | MS.gene060077 | 0.881308 | 2.67E-70 | -1.69E-46 |
MS.gene060076 | MS.gene061044 | 0.849533 | 3.04E-60 | -1.69E-46 |
MS.gene060076 | MS.gene061683 | 0.82556 | 4.39E-54 | -1.69E-46 |
MS.gene060076 | MS.gene061775 | 0.821073 | 4.90E-53 | -1.69E-46 |
MS.gene060076 | MS.gene061777 | 0.842593 | 2.35E-58 | -1.69E-46 |
MS.gene060076 | MS.gene063145 | 0.847617 | 1.03E-59 | -1.69E-46 |
MS.gene060076 | MS.gene063674 | 0.819418 | 1.17E-52 | -1.69E-46 |
MS.gene060076 | MS.gene063689 | 0.815496 | 8.97E-52 | -1.69E-46 |
MS.gene060076 | MS.gene063965 | -0.804682 | 1.92E-49 | -1.69E-46 |
MS.gene060076 | MS.gene064801 | 0.816697 | 4.84E-52 | -1.69E-46 |
MS.gene060076 | MS.gene065049 | 0.828028 | 1.13E-54 | -1.69E-46 |
MS.gene060076 | MS.gene065183 | 0.814267 | 1.68E-51 | -1.69E-46 |
MS.gene060076 | MS.gene065973 | 0.809898 | 1.51E-50 | -1.69E-46 |
MS.gene060076 | MS.gene066358 | 0.842224 | 2.95E-58 | -1.69E-46 |
MS.gene060076 | MS.gene068788 | 0.841653 | 4.17E-58 | -1.69E-46 |
MS.gene060076 | MS.gene068798 | 0.801753 | 7.76E-49 | -1.69E-46 |
MS.gene060076 | MS.gene07042 | 0.803239 | 3.83E-49 | -1.69E-46 |
MS.gene060076 | MS.gene072120 | 0.822627 | 2.14E-53 | -1.69E-46 |
MS.gene060076 | MS.gene072350 | 0.800522 | 1.39E-48 | -1.69E-46 |
MS.gene060076 | MS.gene072351 | 0.814774 | 1.30E-51 | -1.69E-46 |
MS.gene060076 | MS.gene072486 | 0.800187 | 1.62E-48 | -1.69E-46 |
MS.gene060076 | MS.gene072697 | 0.801583 | 8.41E-49 | -1.69E-46 |
MS.gene060076 | MS.gene073161 | 0.808635 | 2.81E-50 | -1.69E-46 |
MS.gene060076 | MS.gene07841 | 0.801929 | 7.14E-49 | -1.69E-46 |
MS.gene060076 | MS.gene08661 | 0.815496 | 8.97E-52 | -1.69E-46 |
MS.gene060076 | MS.gene09162 | 0.81388 | 2.05E-51 | -1.69E-46 |
MS.gene060076 | MS.gene09802 | 0.807676 | 4.50E-50 | -1.69E-46 |
MS.gene060076 | MS.gene20033 | 0.812603 | 3.90E-51 | -1.69E-46 |
MS.gene060076 | MS.gene26474 | 0.813169 | 2.93E-51 | -1.69E-46 |
MS.gene060076 | MS.gene27333 | 0.818037 | 2.42E-52 | -1.69E-46 |
MS.gene060076 | MS.gene27942 | 0.830623 | 2.65E-55 | -1.69E-46 |
MS.gene060076 | MS.gene29353 | 0.806513 | 7.93E-50 | -1.69E-46 |
MS.gene060076 | MS.gene30247 | 0.836083 | 1.15E-56 | -1.69E-46 |
MS.gene060076 | MS.gene33980 | 0.819212 | 1.31E-52 | -1.69E-46 |
MS.gene060076 | MS.gene34720 | 0.814582 | 1.43E-51 | -1.69E-46 |
MS.gene060076 | MS.gene35668 | 0.81112 | 8.21E-51 | -1.69E-46 |
MS.gene060076 | MS.gene36435 | 0.811339 | 7.36E-51 | -1.69E-46 |
MS.gene060076 | MS.gene37005 | 0.822056 | 2.90E-53 | -1.69E-46 |
MS.gene060076 | MS.gene38118 | 0.843348 | 1.48E-58 | -1.69E-46 |
MS.gene060076 | MS.gene40823 | 0.826428 | 2.73E-54 | -1.69E-46 |
MS.gene060076 | MS.gene40842 | 0.813893 | 2.03E-51 | -1.69E-46 |
MS.gene060076 | MS.gene42253 | 0.827561 | 1.46E-54 | -1.69E-46 |
MS.gene060076 | MS.gene43825 | 0.856544 | 3.00E-62 | -1.69E-46 |
MS.gene060076 | MS.gene43896 | 0.841588 | 4.34E-58 | -1.69E-46 |
MS.gene060076 | MS.gene44024 | 0.834695 | 2.58E-56 | -1.69E-46 |
MS.gene060076 | MS.gene45081 | 0.801661 | 8.10E-49 | -1.69E-46 |
MS.gene060076 | MS.gene46156 | 0.823508 | 1.33E-53 | -1.69E-46 |
MS.gene060076 | MS.gene47901 | 0.824582 | 7.46E-54 | -1.69E-46 |
MS.gene060076 | MS.gene47902 | 0.821211 | 4.55E-53 | -1.69E-46 |
MS.gene060076 | MS.gene50620 | 0.830508 | 2.82E-55 | -1.69E-46 |
MS.gene060076 | MS.gene52293 | 0.814335 | 1.62E-51 | -1.69E-46 |
MS.gene060076 | MS.gene52798 | 0.801643 | 8.17E-49 | -1.69E-46 |
MS.gene060076 | MS.gene53779 | 0.947055 | 1.41E-105 | -1.69E-46 |
MS.gene060076 | MS.gene53975 | 0.810939 | 8.98E-51 | -1.69E-46 |
MS.gene060076 | MS.gene54302 | 0.815207 | 1.04E-51 | -1.69E-46 |
MS.gene060076 | MS.gene55082 | 0.815164 | 1.06E-51 | -1.69E-46 |
MS.gene060076 | MS.gene57289 | 0.811523 | 6.71E-51 | -1.69E-46 |
MS.gene060076 | MS.gene57291 | 0.842763 | 2.12E-58 | -1.69E-46 |
MS.gene060076 | MS.gene58096 | 0.818245 | 2.17E-52 | -1.69E-46 |
MS.gene060076 | MS.gene59863 | 0.803022 | 4.25E-49 | -1.69E-46 |
MS.gene060076 | MS.gene60537 | 0.817517 | 3.17E-52 | -1.69E-46 |
MS.gene060076 | MS.gene62680 | 0.835191 | 1.94E-56 | -1.69E-46 |
MS.gene060076 | MS.gene62896 | 0.832361 | 9.88E-56 | -1.69E-46 |
MS.gene060076 | MS.gene63578 | 0.816415 | 5.60E-52 | -1.69E-46 |
MS.gene060076 | MS.gene63663 | 0.804444 | 2.15E-49 | -1.69E-46 |
MS.gene060076 | MS.gene64821 | 0.815633 | 8.36E-52 | -1.69E-46 |
MS.gene060076 | MS.gene67222 | 0.827167 | 1.82E-54 | -1.69E-46 |
MS.gene060076 | MS.gene67231 | 0.841895 | 3.60E-58 | -1.69E-46 |
MS.gene060076 | MS.gene68200 | 0.846391 | 2.24E-59 | -1.69E-46 |
MS.gene060076 | MS.gene68280 | 0.840499 | 8.38E-58 | -1.69E-46 |
MS.gene060076 | MS.gene68793 | 0.84692 | 1.60E-59 | -1.69E-46 |
MS.gene060076 | MS.gene69356 | 0.812671 | 3.77E-51 | -1.69E-46 |
MS.gene060076 | MS.gene69396 | 0.819568 | 1.08E-52 | -1.69E-46 |
MS.gene060076 | MS.gene70240 | 0.808354 | 3.23E-50 | -1.69E-46 |
MS.gene060076 | MS.gene70804 | 0.821221 | 4.53E-53 | -1.69E-46 |
MS.gene060076 | MS.gene71941 | 0.851242 | 1.01E-60 | -1.69E-46 |
MS.gene060076 | MS.gene74341 | 0.819238 | 1.29E-52 | -1.69E-46 |
MS.gene060076 | MS.gene74342 | 0.828758 | 7.52E-55 | -1.69E-46 |
MS.gene060076 | MS.gene74343 | 0.804096 | 2.54E-49 | -1.69E-46 |
MS.gene060076 | MS.gene74557 | 0.800031 | 1.74E-48 | -1.69E-46 |
MS.gene060076 | MS.gene76221 | 0.827243 | 1.74E-54 | -1.69E-46 |
MS.gene060076 | MS.gene76883 | 0.827515 | 1.50E-54 | -1.69E-46 |
MS.gene060076 | MS.gene78187 | 0.810707 | 1.01E-50 | -1.69E-46 |
MS.gene060076 | MS.gene78249 | 0.806687 | 7.29E-50 | -1.69E-46 |
MS.gene060076 | MS.gene79260 | 0.807905 | 4.02E-50 | -1.69E-46 |
MS.gene060076 | MS.gene79856 | 0.808053 | 3.74E-50 | -1.69E-46 |
MS.gene060076 | MS.gene79858 | 0.809873 | 1.53E-50 | -1.69E-46 |
MS.gene060076 | MS.gene83234 | 0.850913 | 1.25E-60 | -1.69E-46 |
MS.gene060076 | MS.gene83692 | 0.80037 | 1.49E-48 | -1.69E-46 |
MS.gene060076 | MS.gene89493 | 0.808337 | 3.26E-50 | -1.69E-46 |
MS.gene060076 | MS.gene90819 | 0.851882 | 6.64E-61 | -1.69E-46 |
MS.gene060076 | MS.gene94828 | 0.80554 | 1.27E-49 | -1.69E-46 |
MS.gene060076 | MS.gene94987 | -0.80933 | 2.00E-50 | -1.69E-46 |
MS.gene060076 | MS.gene96836 | 0.848835 | 4.76E-60 | -1.69E-46 |
MS.gene060076 | MS.gene97191 | 0.808914 | 2.45E-50 | -1.69E-46 |
MS.gene060076 | MS.gene97340 | 0.827981 | 1.16E-54 | -1.69E-46 |
MS.gene060076 | MS.gene97437 | 0.808941 | 2.42E-50 | -1.69E-46 |
MS.gene060076 | MS.gene99127 | 0.816088 | 6.62E-52 | -1.69E-46 |
MS.gene060076 | MS.gene99603 | 0.846271 | 2.41E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060076.t1 | MTR_7g029015 | 99.351 | 154 | 1 | 0 | 1 | 154 | 436 | 589 | 5.54e-105 | 311 |
MS.gene060076.t1 | MTR_3g099150 | 45.395 | 152 | 77 | 2 | 1 | 147 | 409 | 559 | 6.49e-34 | 124 |
MS.gene060076.t1 | MTR_5g022380 | 38.667 | 150 | 74 | 1 | 1 | 150 | 289 | 420 | 1.15e-26 | 103 |
MS.gene060076.t1 | MTR_5g022380 | 38.667 | 150 | 74 | 1 | 1 | 150 | 399 | 530 | 2.63e-26 | 103 |
MS.gene060076.t1 | MTR_4g073690 | 37.241 | 145 | 73 | 1 | 1 | 145 | 411 | 537 | 1.47e-25 | 101 |
MS.gene060076.t1 | MTR_5g090570 | 33.766 | 154 | 78 | 2 | 1 | 154 | 403 | 532 | 4.46e-24 | 97.4 |
MS.gene060076.t1 | MTR_2g450710 | 39.073 | 151 | 79 | 3 | 1 | 151 | 425 | 562 | 3.46e-22 | 92.0 |
MS.gene060076.t1 | MTR_4g116210 | 36.424 | 151 | 83 | 2 | 1 | 151 | 431 | 568 | 4.74e-22 | 91.7 |
MS.gene060076.t1 | MTR_2g100400 | 35.252 | 139 | 69 | 1 | 3 | 141 | 411 | 528 | 5.95e-22 | 91.3 |
MS.gene060076.t1 | MTR_1g111530 | 36.879 | 141 | 76 | 2 | 3 | 141 | 423 | 552 | 1.62e-21 | 90.1 |
MS.gene060076.t1 | MTR_1g111510 | 36.879 | 141 | 76 | 2 | 3 | 141 | 427 | 556 | 5.58e-21 | 88.6 |
MS.gene060076.t1 | MTR_2g104250 | 36.296 | 135 | 64 | 2 | 17 | 151 | 186 | 298 | 1.09e-20 | 86.3 |
MS.gene060076.t1 | MTR_1g050550 | 33.562 | 146 | 87 | 2 | 3 | 147 | 434 | 570 | 1.50e-20 | 87.4 |
MS.gene060076.t1 | MTR_1g111540 | 35.971 | 139 | 80 | 1 | 3 | 141 | 427 | 556 | 4.55e-20 | 85.9 |
MS.gene060076.t1 | MTR_7g102880 | 33.108 | 148 | 85 | 3 | 3 | 147 | 439 | 575 | 5.67e-19 | 82.8 |
MS.gene060076.t1 | MTR_1g059080 | 33.103 | 145 | 87 | 2 | 4 | 147 | 426 | 561 | 1.16e-17 | 79.0 |
MS.gene060076.t1 | MTR_1g111550 | 33.813 | 139 | 83 | 2 | 3 | 141 | 425 | 554 | 1.98e-16 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060076.t1 | AT5G14120 | 65.541 | 148 | 40 | 1 | 1 | 148 | 441 | 577 | 9.76e-63 | 202 |
MS.gene060076.t1 | AT3G01930 | 64.189 | 148 | 42 | 1 | 1 | 148 | 333 | 469 | 1.09e-62 | 199 |
MS.gene060076.t1 | AT3G01930 | 64.189 | 148 | 42 | 1 | 1 | 148 | 446 | 582 | 1.22e-61 | 199 |
MS.gene060076.t1 | AT5G50520 | 44.295 | 149 | 70 | 2 | 1 | 149 | 403 | 538 | 2.07e-37 | 134 |
MS.gene060076.t1 | AT5G50630 | 44.295 | 149 | 70 | 2 | 1 | 149 | 403 | 538 | 2.07e-37 | 134 |
MS.gene060076.t1 | AT4G34950 | 34.211 | 152 | 82 | 1 | 1 | 152 | 428 | 561 | 3.69e-25 | 100 |
MS.gene060076.t1 | AT1G74780 | 34.014 | 147 | 76 | 1 | 1 | 147 | 403 | 528 | 9.60e-24 | 96.3 |
MS.gene060076.t1 | AT1G18940 | 32.653 | 147 | 78 | 1 | 1 | 147 | 396 | 521 | 1.91e-23 | 95.5 |
MS.gene060076.t1 | AT2G16660 | 33.793 | 145 | 78 | 1 | 1 | 145 | 407 | 533 | 8.27e-23 | 94.0 |
MS.gene060076.t1 | AT2G39210 | 34.868 | 152 | 75 | 3 | 4 | 147 | 427 | 562 | 9.30e-22 | 90.9 |
MS.gene060076.t1 | AT2G34350 | 31.126 | 151 | 83 | 1 | 1 | 151 | 396 | 525 | 9.91e-22 | 90.9 |
MS.gene060076.t1 | AT2G34350 | 31.126 | 151 | 83 | 1 | 1 | 151 | 396 | 525 | 9.91e-22 | 90.9 |
MS.gene060076.t1 | AT1G80530 | 37.086 | 151 | 74 | 2 | 1 | 151 | 424 | 553 | 1.29e-21 | 90.5 |
MS.gene060076.t1 | AT2G34355 | 29.801 | 151 | 85 | 1 | 1 | 151 | 244 | 373 | 6.63e-21 | 87.8 |
MS.gene060076.t1 | AT2G34355 | 29.801 | 151 | 85 | 1 | 1 | 151 | 394 | 523 | 1.48e-20 | 87.4 |
MS.gene060076.t1 | AT2G28120 | 33.333 | 147 | 84 | 3 | 4 | 147 | 418 | 553 | 7.05e-17 | 77.0 |
Find 35 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTACAGCCTCTGAATTATT+TGG | 0.203666 | 7.2:-70571355 | MS.gene060076:CDS |
ATGATGCTATATTCAGGTTT+TGG | 0.278330 | 7.2:+70571206 | None:intergenic |
ATTGTTTATGCTAGCTTGTA+TGG | 0.317743 | 7.2:-70571046 | MS.gene060076:CDS |
GACTTGGTTACGGTGCTCAT+TGG | 0.360347 | 7.2:-70571390 | MS.gene060076:CDS |
ATACGAATGATGCTATATTC+AGG | 0.390473 | 7.2:+70571200 | None:intergenic |
TACGTTGGCACTTTACTAGT+TGG | 0.411740 | 7.2:-70571412 | MS.gene060076:CDS |
TTCATTGGCATGGGATGGCC+AGG | 0.416629 | 7.2:-70571442 | MS.gene060076:CDS |
TTACTAGTTGGACTTGGTTA+CGG | 0.418091 | 7.2:-70571400 | MS.gene060076:CDS |
TTATTTGGTTTAAGAAACTT+TGG | 0.428476 | 7.2:-70571340 | MS.gene060076:CDS |
GAGAAGACAAGAGTTCCAAC+AGG | 0.434937 | 7.2:+70571286 | None:intergenic |
CATATGGAACCTTCGCACTT+TGG | 0.443970 | 7.2:+70571151 | None:intergenic |
GGATTATGCATTGTTGCGGC+AGG | 0.460540 | 7.2:-70571100 | MS.gene060076:CDS |
ACTTGGTTACGGTGCTCATT+GGG | 0.463235 | 7.2:-70571389 | MS.gene060076:CDS |
CTGCCATGATAGTGGATGTC+AGG | 0.467856 | 7.2:+70571122 | None:intergenic |
GCATAATCCTGCCATGATAG+TGG | 0.474193 | 7.2:+70571114 | None:intergenic |
TAGCATAAACAATCCTTGTT+CGG | 0.485537 | 7.2:+70571056 | None:intergenic |
TCTCTAGTCTCATTGCTAGT+AGG | 0.486798 | 7.2:-70571267 | MS.gene060076:CDS |
AATAATTCAGAGGCTGTAGC+TGG | 0.491533 | 7.2:+70571358 | None:intergenic |
GGATGTCAGGAAGAAGCATA+TGG | 0.506273 | 7.2:+70571135 | None:intergenic |
TGTTTCTCGTGTTCCGAACA+AGG | 0.516891 | 7.2:-70571069 | MS.gene060076:CDS |
CTTCCTGACATCCACTATCA+TGG | 0.528499 | 7.2:-70571125 | MS.gene060076:CDS |
ATCACTCTAGCAAACCCTGT+TGG | 0.532002 | 7.2:-70571301 | MS.gene060076:CDS |
GTATCTAGTGCGCTTAATGT+TGG | 0.537346 | 7.2:-70571181 | MS.gene060076:CDS |
GGCACTTTACTAGTTGGACT+TGG | 0.541785 | 7.2:-70571406 | MS.gene060076:CDS |
CTGACATCCACTATCATGGC+AGG | 0.565999 | 7.2:-70571121 | MS.gene060076:CDS |
GGCAGGATTATGCATTGTTG+CGG | 0.574036 | 7.2:-70571104 | MS.gene060076:CDS |
TTTCAACTAGCTATGACTGT+TGG | 0.574245 | 7.2:-70571472 | None:intergenic |
TCTTAAACCAAATAATTCAG+AGG | 0.585066 | 7.2:+70571348 | None:intergenic |
GTGCCAACGTACATTGAACC+TGG | 0.605966 | 7.2:+70571424 | None:intergenic |
GGTGACGCGCCAAAGTGCGA+AGG | 0.621883 | 7.2:-70571160 | MS.gene060076:CDS |
GATTATGCATTGTTGCGGCA+GGG | 0.630180 | 7.2:-70571099 | MS.gene060076:CDS |
GAAGCAGAGAAACAAGCTCA+TGG | 0.639621 | 7.2:-70571232 | MS.gene060076:CDS |
AGAAGACAAGAGTTCCAACA+GGG | 0.668994 | 7.2:+70571287 | None:intergenic |
TGGCCAGGTTCAATGTACGT+TGG | 0.706240 | 7.2:-70571427 | MS.gene060076:CDS |
GCAGAGAAACAAGCTCATGG+TGG | 0.726436 | 7.2:-70571229 | MS.gene060076:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTGGTTTAAGAAACTT+TGG | - | chr7.2:70571138-70571157 | MS.gene060076:CDS | 20.0% |
! | TCTTAAACCAAATAATTCAG+AGG | + | chr7.2:70571133-70571152 | None:intergenic | 25.0% |
ATACGAATGATGCTATATTC+AGG | + | chr7.2:70571281-70571300 | None:intergenic | 30.0% | |
TAGCATAAACAATCCTTGTT+CGG | + | chr7.2:70571425-70571444 | None:intergenic | 30.0% | |
! | ATTGTTTATGCTAGCTTGTA+TGG | - | chr7.2:70571432-70571451 | MS.gene060076:CDS | 30.0% |
!! | ATGATGCTATATTCAGGTTT+TGG | + | chr7.2:70571275-70571294 | None:intergenic | 30.0% |
! | ACTGTTGGTCATCTTTTCAT+TGG | - | chr7.2:70571021-70571040 | MS.gene060076:CDS | 35.0% |
! | TTACTAGTTGGACTTGGTTA+CGG | - | chr7.2:70571078-70571097 | MS.gene060076:CDS | 35.0% |
AATAATTCAGAGGCTGTAGC+TGG | + | chr7.2:70571123-70571142 | None:intergenic | 40.0% | |
AGAAGACAAGAGTTCCAACA+GGG | + | chr7.2:70571194-70571213 | None:intergenic | 40.0% | |
GCTACAGCCTCTGAATTATT+TGG | - | chr7.2:70571123-70571142 | MS.gene060076:CDS | 40.0% | |
GTATCTAGTGCGCTTAATGT+TGG | - | chr7.2:70571297-70571316 | MS.gene060076:CDS | 40.0% | |
TACGTTGGCACTTTACTAGT+TGG | - | chr7.2:70571066-70571085 | MS.gene060076:CDS | 40.0% | |
TCTCTAGTCTCATTGCTAGT+AGG | - | chr7.2:70571211-70571230 | MS.gene060076:CDS | 40.0% | |
! | ATCTTTTCATTGGCATGGGA+TGG | - | chr7.2:70571031-70571050 | MS.gene060076:CDS | 40.0% |
! | GGTCATCTTTTCATTGGCAT+GGG | - | chr7.2:70571027-70571046 | MS.gene060076:CDS | 40.0% |
! | TGGTCATCTTTTCATTGGCA+TGG | - | chr7.2:70571026-70571045 | MS.gene060076:CDS | 40.0% |
ACTTGGTTACGGTGCTCATT+GGG | - | chr7.2:70571089-70571108 | MS.gene060076:CDS | 45.0% | |
ATCACTCTAGCAAACCCTGT+TGG | - | chr7.2:70571177-70571196 | MS.gene060076:CDS | 45.0% | |
CATATGGAACCTTCGCACTT+TGG | + | chr7.2:70571330-70571349 | None:intergenic | 45.0% | |
CTTCCTGACATCCACTATCA+TGG | - | chr7.2:70571353-70571372 | MS.gene060076:CDS | 45.0% | |
GAAGCAGAGAAACAAGCTCA+TGG | - | chr7.2:70571246-70571265 | MS.gene060076:CDS | 45.0% | |
GAGAAGACAAGAGTTCCAAC+AGG | + | chr7.2:70571195-70571214 | None:intergenic | 45.0% | |
GATTATGCATTGTTGCGGCA+GGG | - | chr7.2:70571379-70571398 | MS.gene060076:CDS | 45.0% | |
GCATAATCCTGCCATGATAG+TGG | + | chr7.2:70571367-70571386 | None:intergenic | 45.0% | |
GGCACTTTACTAGTTGGACT+TGG | - | chr7.2:70571072-70571091 | MS.gene060076:CDS | 45.0% | |
GGCAGGATTATGCATTGTTG+CGG | - | chr7.2:70571374-70571393 | MS.gene060076:CDS | 45.0% | |
TGTTTCTCGTGTTCCGAACA+AGG | - | chr7.2:70571409-70571428 | MS.gene060076:CDS | 45.0% | |
! | GGATGTCAGGAAGAAGCATA+TGG | + | chr7.2:70571346-70571365 | None:intergenic | 45.0% |
CTGACATCCACTATCATGGC+AGG | - | chr7.2:70571357-70571376 | MS.gene060076:CDS | 50.0% | |
GCAGAGAAACAAGCTCATGG+TGG | - | chr7.2:70571249-70571268 | MS.gene060076:CDS | 50.0% | |
GGATTATGCATTGTTGCGGC+AGG | - | chr7.2:70571378-70571397 | MS.gene060076:CDS | 50.0% | |
GTGCCAACGTACATTGAACC+TGG | + | chr7.2:70571057-70571076 | None:intergenic | 50.0% | |
TGGCCAGGTTCAATGTACGT+TGG | - | chr7.2:70571051-70571070 | MS.gene060076:CDS | 50.0% | |
! | GACTTGGTTACGGTGCTCAT+TGG | - | chr7.2:70571088-70571107 | MS.gene060076:CDS | 50.0% |
!! | CTGCCATGATAGTGGATGTC+AGG | + | chr7.2:70571359-70571378 | None:intergenic | 50.0% |
TTCATTGGCATGGGATGGCC+AGG | - | chr7.2:70571036-70571055 | MS.gene060076:CDS | 55.0% | |
GGTGACGCGCCAAAGTGCGA+AGG | - | chr7.2:70571318-70571337 | MS.gene060076:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 70571018 | 70571482 | 70571018 | ID=MS.gene060076 |
chr7.2 | mRNA | 70571018 | 70571482 | 70571018 | ID=MS.gene060076.t1;Parent=MS.gene060076 |
chr7.2 | exon | 70571018 | 70571482 | 70571018 | ID=MS.gene060076.t1.exon1;Parent=MS.gene060076.t1 |
chr7.2 | CDS | 70571018 | 70571482 | 70571018 | ID=cds.MS.gene060076.t1;Parent=MS.gene060076.t1 |
Gene Sequence |
Protein sequence |