AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45508

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45508.t1 MTR_2g097020 90.280 679 47 4 1 672 1 667 0.0 1204
MS.gene45508.t1 MTR_4g046643 80.758 660 115 4 1 655 1 653 0.0 1028
MS.gene45508.t1 MTR_2g097010 80.826 678 124 1 1 672 1 678 0.0 1023
MS.gene45508.t1 MTR_2g095400 79.941 678 89 5 1 672 1 637 0.0 1019
MS.gene45508.t1 MTR_2g097000 74.872 390 80 3 299 672 2 389 0.0 534
MS.gene45508.t1 MTR_3g067815 39.851 670 345 12 10 667 13 636 7.17e-156 464
MS.gene45508.t1 MTR_5g079940 38.195 665 361 17 21 671 492 1120 2.48e-135 425
MS.gene45508.t1 MTR_4g126200 73.764 263 53 3 414 672 3 253 2.41e-128 380
MS.gene45508.t1 MTR_4g006760 35.952 662 350 15 21 668 24 625 2.02e-118 367
MS.gene45508.t1 MTR_4g131350 36.771 669 352 16 16 671 72 682 4.59e-117 365
MS.gene45508.t1 MTR_4g125920 36.622 669 353 16 16 671 19 629 6.90e-117 363
MS.gene45508.t1 MTR_4g126180 77.391 115 26 0 300 414 3 117 4.79e-50 170
MS.gene45508.t1 MTR_3g067855 43.182 220 109 4 441 659 123 327 1.64e-45 166
MS.gene45508.t1 MTR_8g446460 55.147 136 52 3 9 138 107 239 8.10e-35 135
MS.gene45508.t1 MTR_3g067845 35.075 268 155 5 406 671 1 251 2.20e-34 132
MS.gene45508.t1 MTR_4g131310 26.327 471 248 13 16 471 19 405 3.12e-30 124
MS.gene45508.t1 MTR_4g131310 59.375 64 26 0 597 660 391 454 9.83e-18 87.0
MS.gene45508.t1 MTR_2g066850 65.882 85 24 3 2 84 66 147 8.48e-25 110
MS.gene45508.t1 MTR_2g075630 74.242 66 14 2 2 67 67 129 4.47e-24 102
MS.gene45508.t1 MTR_8g063010 61.905 63 21 2 18 80 57 116 3.42e-18 84.0
MS.gene45508.t1 MTR_3g067825 44.444 90 45 2 575 659 3 92 3.07e-16 75.9
MS.gene45508.t1 MTR_5g044360 60.000 50 18 2 25 74 76 123 3.45e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45508.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.16e-142 434
MS.gene45508.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.97e-11 66.2
MS.gene45508.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.16e-142 434
MS.gene45508.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.97e-11 66.2
MS.gene45508.t1 AT3G12550 36.090 665 371 13 13 663 5 629 4.23e-118 367
MS.gene45508.t1 AT3G48670 35.810 673 370 15 13 671 21 645 1.46e-116 363
MS.gene45508.t1 AT3G48670 35.810 673 370 15 13 671 21 645 1.46e-116 363
MS.gene45508.t1 AT3G48670 35.810 673 370 15 13 671 21 645 1.46e-116 363
MS.gene45508.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.92e-116 363
MS.gene45508.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.92e-116 363
MS.gene45508.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.92e-116 363
MS.gene45508.t1 AT1G15910 34.417 677 363 15 16 671 18 634 1.03e-110 348
MS.gene45508.t1 AT5G59390 36.746 547 306 10 131 661 17 539 1.46e-105 332
MS.gene45508.t1 AT5G59390 36.746 547 306 10 131 661 17 539 1.46e-105 332
MS.gene45508.t1 AT5G59390 36.746 547 306 10 131 661 17 539 1.46e-105 332
MS.gene45508.t1 AT4G00380 33.985 665 360 15 15 659 18 623 1.18e-104 332
MS.gene45508.t1 AT4G00380 33.985 665 360 15 15 659 18 623 1.18e-104 332
MS.gene45508.t1 AT5G59390 36.413 552 306 11 131 661 17 544 2.99e-103 326
MS.gene45508.t1 AT5G59390 36.413 552 306 11 131 661 17 544 2.99e-103 326
MS.gene45508.t1 AT1G80790 35.007 677 359 15 15 671 19 634 7.37e-102 325
MS.gene45508.t1 AT1G80790 35.007 677 359 15 15 671 19 634 7.37e-102 325
MS.gene45508.t1 AT4G00380 36.499 537 292 9 141 659 90 595 8.52e-102 323
MS.gene45508.t1 AT4G01180 36.147 545 296 10 137 661 27 539 2.53e-97 310
MS.gene45508.t1 AT3G12550 33.447 586 336 13 16 587 8 553 7.20e-85 278
MS.gene45508.t1 AT4G01780 32.043 465 209 10 209 671 111 470 1.97e-58 204
MS.gene45508.t1 AT1G80790 30.388 464 256 12 15 458 19 435 1.28e-54 194
MS.gene45508.t1 AT3G29375 42.857 210 98 5 462 670 38 226 6.98e-42 152
MS.gene45508.t1 AT3G29375 42.857 210 98 5 462 670 161 349 1.24e-39 149
MS.gene45508.t1 AT3G29375 38.095 126 59 3 462 587 38 144 5.62e-15 73.9
MS.gene45508.t1 AT2G16490 40.000 65 39 0 596 660 74 138 7.18e-12 65.1

Find 157 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCATTGTTTAATTAAA+TGG 0.065652 2.1:+6660547 None:intergenic
TTCCTCAGTCTTCAGCTTTA+AGG 0.090360 2.1:+6663202 None:intergenic
GGGGACTTGAAAACTGTTTC+TGG 0.148020 2.1:-6663281 MS.gene45508:CDS
CCCTTTGCAGTTGTTCAATT+TGG 0.168840 2.1:-6663488 MS.gene45508:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.1:+6661240 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.1:-6663108 MS.gene45508:CDS
TATAGTTGGCAAACACCTTC+AGG 0.289693 2.1:-6663309 MS.gene45508:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.297864 2.1:-6662054 MS.gene45508:CDS
GAGGGATTACTTGGCTTTAC+GGG 0.324290 2.1:-6663396 MS.gene45508:CDS
GGCAAACACCTTCAGGGAAA+TGG 0.327163 2.1:-6663302 MS.gene45508:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.1:-6663368 MS.gene45508:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.1:+6664008 None:intergenic
AAGGCTGAAAGGAGCTTTCC+AGG 0.329972 2.1:-6662147 MS.gene45508:CDS
TCAACAAACTCTGGTTGTTC+AGG 0.333719 2.1:-6662018 MS.gene45508:CDS
CTTCCATTGTTTAATTAAAT+GGG 0.340209 2.1:+6660548 None:intergenic
AGTCTTCAGCTTTAAGGTAT+TGG 0.341440 2.1:+6663208 None:intergenic
AATTCCAGAGTTCTGGTATT+GGG 0.344766 2.1:+6660610 None:intergenic
TGCTAAACAGGCATTGGAAT+TGG 0.345449 2.1:-6662177 MS.gene45508:CDS
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.1:+6663138 None:intergenic
TCTCTAAAATTCCAGAGTTC+TGG 0.347547 2.1:+6660603 None:intergenic
GGCTTTACGGGAGCAGGAGC+GGG 0.350376 2.1:-6663384 MS.gene45508:CDS
AAAATTGGAGGAAATCAAAA+TGG 0.350809 2.1:-6662084 MS.gene45508:CDS
ACTGCCCTTTGGAACTTTAG+AGG 0.353454 2.1:-6663518 MS.gene45508:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.1:-6663705 MS.gene45508:CDS
ACCTGAGTCACCCACAATTC+TGG 0.361313 2.1:+6663895 None:intergenic
AAAGCTGAAGACTGAGGAAT+TGG 0.361410 2.1:-6663198 MS.gene45508:CDS
AGAGGGATTACTTGGCTTTA+CGG 0.374808 2.1:-6663397 MS.gene45508:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.1:-6663107 MS.gene45508:intron
GCAAACACCTTCAGGGAAAT+GGG 0.378780 2.1:-6663301 MS.gene45508:CDS
CATTGAAAGTTACTGCCCTT+TGG 0.383307 2.1:-6663529 MS.gene45508:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.1:-6664059 MS.gene45508:CDS
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 2.1:-6660701 MS.gene45508:CDS
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.1:+6661241 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.1:+6662129 None:intergenic
GAGAGGACTTGATGCTAAAC+AGG 0.402921 2.1:-6662189 MS.gene45508:CDS
GGAAAGAAGCTGAGGACAAT+AGG 0.403031 2.1:-6663259 MS.gene45508:CDS
CAAAGGGCAGTAACTTTCAA+TGG 0.403403 2.1:+6663530 None:intergenic
GGAAGAGGAATTAGAGGGTG+TGG 0.409930 2.1:-6662048 MS.gene45508:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.1:+6663139 None:intergenic
CTCTTAGCTGCTTCCACGAA+TGG 0.415838 2.1:+6661180 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.1:-6663405 MS.gene45508:CDS
ATGGGAAACACCTTCCTTCA+AGG 0.418880 2.1:+6660566 None:intergenic
CCGAGCTTCCAGTTCCAGCC+TGG 0.420885 2.1:+6662817 None:intergenic
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.1:-6663231 MS.gene45508:CDS
GGGACTTGAAAACTGTTTCT+GGG 0.423117 2.1:-6663280 MS.gene45508:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.1:-6663323 MS.gene45508:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 2.1:-6660702 MS.gene45508:CDS
CAAAATGGAGCTGCAGGAAA+AGG 0.431336 2.1:-6662069 MS.gene45508:CDS
TTACTTGGCTTTACGGGAGC+AGG 0.431347 2.1:-6663390 MS.gene45508:CDS
GTACCAGGAGAAAGTATCTA+AGG 0.432366 2.1:-6662852 MS.gene45508:CDS
AAATTCCAGAGTTCTGGTAT+TGG 0.450982 2.1:+6660609 None:intergenic
GGAAATCAAAATGGAGCTGC+AGG 0.455953 2.1:-6662075 MS.gene45508:CDS
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.1:-6663704 MS.gene45508:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.463871 2.1:+6662727 None:intergenic
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.1:-6663415 MS.gene45508:CDS
TCAAGTCCCCATTTCCCTGA+AGG 0.479524 2.1:+6663294 None:intergenic
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.1:-6663559 MS.gene45508:CDS
GCAGGTTGAACGCGAGTACC+AGG 0.481691 2.1:-6662867 MS.gene45508:CDS
TGGCTTTACGGGAGCAGGAG+CGG 0.481924 2.1:-6663385 MS.gene45508:CDS
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.1:-6661220 MS.gene45508:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.1:-6663360 MS.gene45508:CDS
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.1:-6663135 MS.gene45508:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 2.1:-6660694 MS.gene45508:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.501356 2.1:-6662243 MS.gene45508:intron
TTTACTTGTACACAGTGGAT+TGG 0.502307 2.1:-6661267 MS.gene45508:intron
TTGTCCGTTACAACTTTGAA+CGG 0.502338 2.1:+6661033 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.1:-6663367 MS.gene45508:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.506331 2.1:-6663236 MS.gene45508:CDS
AAAGGGCAGTAACTTTCAAT+GGG 0.509326 2.1:+6663531 None:intergenic
CCAAATTGAACAACTGCAAA+GGG 0.510429 2.1:+6663488 None:intergenic
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.1:-6661224 MS.gene45508:CDS
ACTTGATGCTAAACAGGCAT+TGG 0.514013 2.1:-6662183 MS.gene45508:CDS
ACTTGATATCAAGCCATTCG+TGG 0.514781 2.1:-6661193 MS.gene45508:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.1:-6663661 MS.gene45508:CDS
ATGATGATGAGTTGTTTGTA+TGG 0.517675 2.1:-6663667 MS.gene45508:CDS
AGGAAGGAAGGCTTCCTTGA+AGG 0.521328 2.1:-6660580 MS.gene45508:CDS
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.1:-6663858 MS.gene45508:CDS
AAAGTTGTAACGGACAAAGA+AGG 0.523153 2.1:-6661027 MS.gene45508:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.1:-6662789 MS.gene45508:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.1:+6660624 None:intergenic
GGAAGATCTTCAACAAACTC+TGG 0.525747 2.1:-6662027 MS.gene45508:CDS
TAGCATCAAGTCCTCTCTCC+AGG 0.527448 2.1:+6662195 None:intergenic
CATTGGAATTGGAGATAGAA+AGG 0.527648 2.1:-6662166 MS.gene45508:CDS
TCCAAATTGAACAACTGCAA+AGG 0.527752 2.1:+6663487 None:intergenic
GGCATTAGAAGAGCAACAAA+AGG 0.535693 2.1:-6662381 MS.gene45508:CDS
TAATCCTTGTTGTAGCAAAA+CGG 0.536850 2.1:+6663950 None:intergenic
TCCAGAATTGTGGGTGACTC+AGG 0.538417 2.1:-6663896 MS.gene45508:CDS
TGTTCAATTTGGAAGAGAGT+GGG 0.538931 2.1:-6663477 MS.gene45508:CDS
TAGTATTGTTAATGATAAGT+CGG 0.539521 2.1:-6663765 MS.gene45508:CDS
GTACTTGGCAGAAGAACATA+AGG 0.541395 2.1:-6662342 MS.gene45508:intron
GCTTTACGGGAGCAGGAGCG+GGG 0.541512 2.1:-6663383 MS.gene45508:CDS
ATAGTTGGCAAACACCTTCA+GGG 0.546668 2.1:-6663308 MS.gene45508:CDS
TTGTTCAATTTGGAAGAGAG+TGG 0.547384 2.1:-6663478 MS.gene45508:CDS
ACTTTGAACGGATGCCAGCT+TGG 0.548798 2.1:+6661045 None:intergenic
AAAGTGGGATGACTATGTTA+AGG 0.550233 2.1:-6661070 MS.gene45508:CDS
AGAGATCAGCAAGATGCGGC+AGG 0.552419 2.1:-6662885 MS.gene45508:CDS
TGCAGTAGCTACAGCTCTGA+AGG 0.557138 2.1:-6660664 MS.gene45508:CDS
CCAGGCTGGAACTGGAAGCT+CGG 0.558629 2.1:-6662817 MS.gene45508:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.1:-6664008 MS.gene45508:CDS
GATCCTTAGATACTTTCTCC+TGG 0.560678 2.1:+6662849 None:intergenic
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.1:-6663414 MS.gene45508:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.1:-6661219 MS.gene45508:CDS
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.1:-6663560 MS.gene45508:CDS
TTTGTCCTCTAAAGTTCCAA+AGG 0.575959 2.1:+6663513 None:intergenic
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.1:-6660519 None:intergenic
CAATTTGGAAGAGAGTGGGA+TGG 0.581803 2.1:-6663473 MS.gene45508:CDS
GGTACCCAATACCAGAACTC+TGG 0.581859 2.1:-6660614 MS.gene45508:CDS
CAATCGAGTGGTGCTCAAAG+TGG 0.583300 2.1:-6661086 MS.gene45508:CDS
TTTCCCATTTAATTAAACAA+TGG 0.583512 2.1:-6660551 MS.gene45508:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.585994 2.1:-6662063 MS.gene45508:CDS
AATCGAGTGGTGCTCAAAGT+GGG 0.588592 2.1:-6661085 MS.gene45508:CDS
TTGTCCTCTAAAGTTCCAAA+GGG 0.590549 2.1:+6663514 None:intergenic
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.1:-6662206 MS.gene45508:CDS
AAGTTGTAACGGACAAAGAA+GGG 0.592579 2.1:-6661026 MS.gene45508:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.1:+6660625 None:intergenic
GAGACATGCATCCAGAATTG+TGG 0.598602 2.1:-6663906 MS.gene45508:CDS
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.1:+6663964 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.1:-6663714 MS.gene45508:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.1:-6662131 MS.gene45508:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.606515 2.1:-6662402 MS.gene45508:intron
TCACAAGAAAATTCATGACC+TGG 0.607531 2.1:-6662213 MS.gene45508:CDS
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.1:+6662777 None:intergenic
AGGAAGGCTTCCTTGAAGGA+AGG 0.613280 2.1:-6660576 MS.gene45508:CDS
GCATCCGTTCAAAGTTGTAA+CGG 0.615867 2.1:-6661037 MS.gene45508:CDS
AGACATGCATCCAGAATTGT+GGG 0.616586 2.1:-6663905 MS.gene45508:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.1:-6664023 MS.gene45508:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.1:-6663657 MS.gene45508:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.1:-6663154 MS.gene45508:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.1:-6663144 MS.gene45508:CDS
TTGGAGATAGAAAGGCTGAA+AGG 0.620293 2.1:-6662158 MS.gene45508:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.1:+6662778 None:intergenic
GAAAAGGAAGAGGAATTAGA+GGG 0.621506 2.1:-6662053 MS.gene45508:CDS
CTGAGGACAATAGGAAAGCG+AGG 0.623390 2.1:-6663250 MS.gene45508:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.1:-6663267 MS.gene45508:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.1:-6663713 MS.gene45508:CDS
ATTAACAATACTAACACAAG+GGG 0.636350 2.1:+6663775 None:intergenic
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.1:+6663447 None:intergenic
TAAACAATGGAAGTTAAACA+AGG 0.639594 2.1:-6660538 MS.gene45508:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 2.1:-6660700 MS.gene45508:CDS
TGCAAATGAAAGCAATCGAG+TGG 0.643737 2.1:-6661098 MS.gene45508:CDS
CATTAGAGATCAGCAAGATG+CGG 0.643905 2.1:-6662889 MS.gene45508:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.1:-6660635 MS.gene45508:CDS
ACTATGTTAAGGATCCAAGC+TGG 0.645868 2.1:-6661059 MS.gene45508:CDS
CATTAACAATACTAACACAA+GGG 0.650472 2.1:+6663774 None:intergenic
GGCTGGAACTGGAAGCTCGG+AGG 0.651348 2.1:-6662814 MS.gene45508:CDS
AATTGTGGGTGACTCAGGTG+AGG 0.654445 2.1:-6663891 MS.gene45508:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.1:-6663445 MS.gene45508:CDS
TCATTAACAATACTAACACA+AGG 0.656143 2.1:+6663773 None:intergenic
TACCTTAAAGCTGAAGACTG+AGG 0.656236 2.1:-6663204 MS.gene45508:CDS
GACAGCAAGCAAGTATGATG+AGG 0.660335 2.1:-6663171 MS.gene45508:CDS
AAACAATGGAAGTTAAACAA+GGG 0.663429 2.1:-6660537 MS.gene45508:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.1:-6663836 MS.gene45508:CDS
CAAACACCTTCAGGGAAATG+GGG 0.680457 2.1:-6663300 MS.gene45508:CDS
GGACAAAGAAGGGAACTCCA+AGG 0.695584 2.1:-6661016 MS.gene45508:intron
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.1:-6660639 MS.gene45508:CDS
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.1:-6663364 MS.gene45508:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.1:-6663422 MS.gene45508:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATCATAAAAAAATTA+AGG - chr2.1:6661018-6661037 MS.gene45508:CDS 10.0%
!!! GAGAAAAAATATTAATTTTA+AGG + chr2.1:6663635-6663654 None:intergenic 10.0%
!!! TTCATAAAATTTTACATTTT+AGG - chr2.1:6663108-6663127 MS.gene45508:CDS 10.0%
!!! TTTGATTTTTTAATATTTCA+TGG - chr2.1:6661660-6661679 MS.gene45508:intron 10.0%
!! AAATCATAAAAAAATTAAGG+AGG - chr2.1:6661021-6661040 MS.gene45508:CDS 15.0%
!! AAGAAACATGTAATATATTT+CGG - chr2.1:6661887-6661906 MS.gene45508:intron 15.0%
!! ATAAGTTATTGAAAAATAAG+AGG + chr2.1:6662151-6662170 None:intergenic 15.0%
!! CAAAATAAACAATGAAATTA+TGG + chr2.1:6663296-6663315 None:intergenic 15.0%
!! TAAGTTATTGAAAAATAAGA+GGG + chr2.1:6662150-6662169 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG - chr2.1:6661274-6661293 MS.gene45508:intron 15.0%
!!! AAATTTGCTTCTTTTAAAAA+TGG - chr2.1:6662046-6662065 MS.gene45508:CDS 15.0%
!!! ATGTTAATTTTAATGTCTAA+TGG - chr2.1:6662676-6662695 MS.gene45508:intron 15.0%
!!! TGAATTGTTTTAATTGATAT+TGG - chr2.1:6661530-6661549 MS.gene45508:intron 15.0%
!! AAATTAACATTTATATGCTG+AGG + chr2.1:6662666-6662685 None:intergenic 20.0%
!! ACTTCCATTGTTTAATTAAA+TGG + chr2.1:6664053-6664072 None:intergenic 20.0%
!! AGAAACATGTAATATATTTC+GGG - chr2.1:6661888-6661907 MS.gene45508:intron 20.0%
!! ATCTAACATATATTAGATCA+TGG + chr2.1:6663834-6663853 None:intergenic 20.0%
!! CAATTCAGTTTCTATATTTA+AGG - chr2.1:6662979-6662998 MS.gene45508:intron 20.0%
!! CTTCCATTGTTTAATTAAAT+GGG + chr2.1:6664052-6664071 None:intergenic 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG + chr2.1:6663715-6663734 None:intergenic 20.0%
!! TACAAGTAAATGTAATTACT+TGG + chr2.1:6663320-6663339 None:intergenic 20.0%
!! TAGTATTGTTAATGATAAGT+CGG - chr2.1:6660832-6660851 MS.gene45508:intron 20.0%
!! TATAGATGAGAAGAAAAAAT+TGG - chr2.1:6662498-6662517 MS.gene45508:intron 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG - chr2.1:6663716-6663735 MS.gene45508:CDS 20.0%
!! TTTCCCATTTAATTAAACAA+TGG - chr2.1:6664046-6664065 MS.gene45508:CDS 20.0%
!!! TACTACTATATCTATCATTT+TGG - chr2.1:6661594-6661613 MS.gene45508:intron 20.0%
!!! TTTTACATTTTAGGTGAAAT+TGG - chr2.1:6663117-6663136 MS.gene45508:CDS 20.0%
! AAAATTGGAGGAAATCAAAA+TGG - chr2.1:6662513-6662532 MS.gene45508:intron 25.0%
! AAACAATGGAAGTTAAACAA+GGG - chr2.1:6664060-6664079 MS.gene45508:CDS 25.0%
! AACTAAAAACTGTAGGTAAT+AGG + chr2.1:6662296-6662315 None:intergenic 25.0%
! AATTGAAAACACCGAAAATT+TGG + chr2.1:6662964-6662983 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2.1:6663378-6663397 MS.gene45508:CDS 25.0%
! ATATGTTAGATATATCACAC+AGG - chr2.1:6663843-6663862 MS.gene45508:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr2.1:6661490-6661509 MS.gene45508:intron 25.0%
! ATTAACAATACTAACACAAG+GGG + chr2.1:6660825-6660844 None:intergenic 25.0%
! CATTAACAATACTAACACAA+GGG + chr2.1:6660826-6660845 None:intergenic 25.0%
! GAAATGTATATTGAAAGCTA+TGG - chr2.1:6660761-6660780 MS.gene45508:intron 25.0%
! TAAAAAGCTGAAAAGTTTGA+AGG - chr2.1:6663885-6663904 MS.gene45508:CDS 25.0%
! TAAAACTTAAGCAGAAATGT+AGG - chr2.1:6662783-6662802 MS.gene45508:CDS 25.0%
! TAAACAATGGAAGTTAAACA+AGG - chr2.1:6664059-6664078 MS.gene45508:CDS 25.0%
! TATTGAAAAATAAGAGGGAT+TGG + chr2.1:6662145-6662164 None:intergenic 25.0%
! TCATTAACAATACTAACACA+AGG + chr2.1:6660827-6660846 None:intergenic 25.0%
! TGAATTACAATCATCATCTT+TGG + chr2.1:6663092-6663111 None:intergenic 25.0%
! TGATGAAAAAATGATGTACT+TGG - chr2.1:6662240-6662259 MS.gene45508:intron 25.0%
! TTGTTCACATGTATTTACAA+CGG - chr2.1:6662933-6662952 MS.gene45508:intron 25.0%
! TTTCTTCTCAAAATATAGCT+TGG + chr2.1:6661873-6661892 None:intergenic 25.0%
! TTTGTCATATTGTTTCATAC+TGG - chr2.1:6663196-6663215 MS.gene45508:CDS 25.0%
!! AACTAATCTTTTACAAAGTC+AGG - chr2.1:6662729-6662748 MS.gene45508:CDS 25.0%
!! AATGGTGCATTATATGTTTT+AGG + chr2.1:6663697-6663716 None:intergenic 25.0%
!! ATACAGCTATTAACTTTTTG+CGG + chr2.1:6662636-6662655 None:intergenic 25.0%
!! ATGGTGCATTATATGTTTTA+GGG + chr2.1:6663696-6663715 None:intergenic 25.0%
!! ATTTCTGCTTAAGTTTTACA+AGG + chr2.1:6662781-6662800 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG - chr2.1:6663723-6663742 MS.gene45508:CDS 25.0%
!!! AATTATGTTTTGAGAACTCT+AGG - chr2.1:6662331-6662350 MS.gene45508:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG + chr2.1:6663244-6663263 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG - chr2.1:6662900-6662919 MS.gene45508:intron 25.0%
AAAACACCGAAAATTTGGAT+TGG + chr2.1:6662959-6662978 None:intergenic 30.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr2.1:6663895-6663914 MS.gene45508:CDS 30.0%
AAAGCATGGTAATTGGTATT+GGG - chr2.1:6663730-6663749 MS.gene45508:CDS 30.0%
ACTTATTATGAATGATGCTG+AGG - chr2.1:6660883-6660902 MS.gene45508:intron 30.0%
AGATGAGAAGAAAAAATTGG+AGG - chr2.1:6662501-6662520 MS.gene45508:intron 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2.1:6663377-6663396 MS.gene45508:CDS 30.0%
CTTATTATGAATGATGCTGA+GGG - chr2.1:6660884-6660903 MS.gene45508:intron 30.0%
GAGTCATAATTTCTGTGAAA+AGG - chr2.1:6663373-6663392 MS.gene45508:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG - chr2.1:6661489-6661508 MS.gene45508:intron 30.0%
TAGATATTATGAAGACCTGA+AGG - chr2.1:6660574-6660593 MS.gene45508:CDS 30.0%
TAGGGGATAAATATATCCAA+AGG + chr2.1:6663678-6663697 None:intergenic 30.0%
TCTATTTACTGGAAATTTGC+TGG - chr2.1:6663759-6663778 MS.gene45508:CDS 30.0%
TGATTTGAATGTTTGCAAAC+AGG + chr2.1:6662873-6662892 None:intergenic 30.0%
TTACATTTACTTGTACACAG+TGG - chr2.1:6663325-6663344 MS.gene45508:CDS 30.0%
TTAGGTGAAATTGGTAGAAT+CGG - chr2.1:6663126-6663145 MS.gene45508:CDS 30.0%
TTTGAAAGTGAGCAATTTAC+AGG - chr2.1:6662017-6662036 MS.gene45508:CDS 30.0%
! ATCACACAGGAAATTTTAGA+CGG - chr2.1:6663856-6663875 MS.gene45508:CDS 30.0%
! ATGATGATGAGTTGTTTGTA+TGG - chr2.1:6660930-6660949 MS.gene45508:intron 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG - chr2.1:6660996-6661015 MS.gene45508:intron 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG - chr2.1:6661554-6661573 MS.gene45508:intron 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG + chr2.1:6660650-6660669 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG + chr2.1:6662635-6662654 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG + chr2.1:6662073-6662092 None:intergenic 30.0%
!! TGGTGCATTATATGTTTTAG+GGG + chr2.1:6663695-6663714 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG - chr2.1:6663209-6663228 MS.gene45508:CDS 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr2.1:6662195-6662214 MS.gene45508:CDS 30.0%
!! TTTTTCAAAATCACCATCCA+TGG + chr2.1:6660956-6660975 None:intergenic 30.0%
!!! CAACATACTTTCCACTTTTT+GGG + chr2.1:6660997-6661016 None:intergenic 30.0%
AAAGGGCAGTAACTTTCAAT+GGG + chr2.1:6661069-6661088 None:intergenic 35.0%
AAAGTGGGATGACTATGTTA+AGG - chr2.1:6663527-6663546 MS.gene45508:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr2.1:6663896-6663915 MS.gene45508:CDS 35.0%
AATTATGGCAACAAAGCAAC+AGG + chr2.1:6663281-6663300 None:intergenic 35.0%
ACAATGCTATGAAGTTAGAG+AGG - chr2.1:6661152-6661171 MS.gene45508:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG - chr2.1:6660983-6661002 MS.gene45508:intron 35.0%
ATTTGACACAGAAGACCAAA+TGG + chr2.1:6662114-6662133 None:intergenic 35.0%
CATTGGAATTGGAGATAGAA+AGG - chr2.1:6662431-6662450 MS.gene45508:intron 35.0%
CCAAATTGAACAACTGCAAA+GGG + chr2.1:6661112-6661131 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr2.1:6662544-6662563 MS.gene45508:intron 35.0%
GATTTAGAGGAGAAACATTC+TGG - chr2.1:6661567-6661586 MS.gene45508:intron 35.0%
GTGTTCATGAGAAGGTTAAA+AGG + chr2.1:6661955-6661974 None:intergenic 35.0%
TAGGTGAAATTGGTAGAATC+GGG - chr2.1:6663127-6663146 MS.gene45508:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG - chr2.1:6662384-6662403 MS.gene45508:CDS 35.0%
TCCAAATTGAACAACTGCAA+AGG + chr2.1:6661113-6661132 None:intergenic 35.0%
TCTCTAACTTCATAGCATTG+TGG + chr2.1:6661153-6661172 None:intergenic 35.0%
TGTTAGCATTCCTTACTCTA+TGG - chr2.1:6662087-6662106 MS.gene45508:CDS 35.0%
TGTTCAATTTGGAAGAGAGT+GGG - chr2.1:6661120-6661139 MS.gene45508:CDS 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr2.1:6663958-6663977 MS.gene45508:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2.1:6662466-6662485 MS.gene45508:intron 35.0%
TTGGATGTTGCAGAAAGAAA+AGG - chr2.1:6662354-6662373 MS.gene45508:CDS 35.0%
TTGGGTAGTGATCTATTTAC+TGG - chr2.1:6663748-6663767 MS.gene45508:CDS 35.0%
TTGTCCGTTACAACTTTGAA+CGG + chr2.1:6663567-6663586 None:intergenic 35.0%
TTGTTCAATTTGGAAGAGAG+TGG - chr2.1:6661119-6661138 MS.gene45508:CDS 35.0%
TTTACTTGTACACAGTGGAT+TGG - chr2.1:6663330-6663349 MS.gene45508:CDS 35.0%
! AAATTCCAGAGTTCTGGTAT+TGG + chr2.1:6663991-6664010 None:intergenic 35.0%
! AATTCCAGAGTTCTGGTATT+GGG + chr2.1:6663990-6664009 None:intergenic 35.0%
! ACAAAAGTGTGTTCATGAGA+AGG + chr2.1:6661963-6661982 None:intergenic 35.0%
! CATGAACACACTTTTGTGAT+AGG - chr2.1:6661966-6661985 MS.gene45508:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG - chr2.1:6660995-6661014 MS.gene45508:intron 35.0%
! GAAAGCATGGTAATTGGTAT+TGG - chr2.1:6663729-6663748 MS.gene45508:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG - chr2.1:6661621-6661640 MS.gene45508:intron 35.0%
!! AAAGTTGTAACGGACAAAGA+AGG - chr2.1:6663570-6663589 MS.gene45508:CDS 35.0%
!! AAGTTGTAACGGACAAAGAA+GGG - chr2.1:6663571-6663590 MS.gene45508:CDS 35.0%
!! AGTCTTCAGCTTTAAGGTAT+TGG + chr2.1:6661392-6661411 None:intergenic 35.0%
!! CCAACATACTTTCCACTTTT+TGG + chr2.1:6660998-6661017 None:intergenic 35.0%
!! GAATTTTAGAGAAGGAAGGA+AGG - chr2.1:6664005-6664024 MS.gene45508:CDS 35.0%
!! TCTCTAAAATTCCAGAGTTC+TGG + chr2.1:6663997-6664016 None:intergenic 35.0%
!! TCTGGAATTTTAGAGAAGGA+AGG - chr2.1:6664001-6664020 MS.gene45508:CDS 35.0%
!! TTGTCCTCTAAAGTTCCAAA+GGG + chr2.1:6661086-6661105 None:intergenic 35.0%
!! TTTGTCCTCTAAAGTTCCAA+AGG + chr2.1:6661087-6661106 None:intergenic 35.0%
!!! ATGTTTTGAGAACTCTAGGT+TGG - chr2.1:6662335-6662354 MS.gene45508:intron 35.0%
!!! GAACTCTGGAATTTTAGAGA+AGG - chr2.1:6663997-6664016 MS.gene45508:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr2.1:6662391-6662410 MS.gene45508:CDS 40.0%
AAAGCTGAAGACTGAGGAAT+TGG - chr2.1:6661399-6661418 MS.gene45508:intron 40.0%
AAGGAAAGCGATGGATCAAA+AGG - chr2.1:6661462-6661481 MS.gene45508:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr2.1:6663897-6663916 MS.gene45508:CDS 40.0%
AATGATGCTGAGGGTCATTT+GGG - chr2.1:6660893-6660912 MS.gene45508:intron 40.0%
ACCAAATGGTCCATAGAGTA+AGG + chr2.1:6662100-6662119 None:intergenic 40.0%
ACTATGTTAAGGATCCAAGC+TGG - chr2.1:6663538-6663557 MS.gene45508:CDS 40.0%
ACTTGATATCAAGCCATTCG+TGG - chr2.1:6663404-6663423 MS.gene45508:CDS 40.0%
ACTTGATGCTAAACAGGCAT+TGG - chr2.1:6662414-6662433 MS.gene45508:intron 40.0%
AGACATGCATCCAGAATTGT+GGG - chr2.1:6660692-6660711 MS.gene45508:CDS 40.0%
ATAGTTGGCAAACACCTTCA+GGG - chr2.1:6661289-6661308 MS.gene45508:intron 40.0%
ATGAGTTGTTTGTATGGCCA+TGG - chr2.1:6660936-6660955 MS.gene45508:intron 40.0%
CAAAGGGCAGTAACTTTCAA+TGG + chr2.1:6661070-6661089 None:intergenic 40.0%
CATCTTTGGACACAAACAAC+TGG + chr2.1:6663078-6663097 None:intergenic 40.0%
CATTAGAGATCAGCAAGATG+CGG - chr2.1:6661708-6661727 MS.gene45508:intron 40.0%
CATTGAAAGTTACTGCCCTT+TGG - chr2.1:6661068-6661087 MS.gene45508:CDS 40.0%
CCCTTTGCAGTTGTTCAATT+TGG - chr2.1:6661109-6661128 MS.gene45508:CDS 40.0%
CCTGAAGGATGATTACTACA+AGG - chr2.1:6660589-6660608 MS.gene45508:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG + chr2.1:6660592-6660611 None:intergenic 40.0%
CTAAGGATCATGAAAAAGCC+AGG - chr2.1:6661762-6661781 MS.gene45508:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2.1:6662471-6662490 None:intergenic 40.0%
GATCCTTAGATACTTTCTCC+TGG + chr2.1:6661751-6661770 None:intergenic 40.0%
GCAGCTGAACTAAAAACTGT+AGG + chr2.1:6662303-6662322 None:intergenic 40.0%
GCATCCGTTCAAAGTTGTAA+CGG - chr2.1:6663560-6663579 MS.gene45508:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr2.1:6662543-6662562 MS.gene45508:intron 40.0%
GGAAGATCTTCAACAAACTC+TGG - chr2.1:6662570-6662589 MS.gene45508:intron 40.0%
GGCATTAGAAGAGCAACAAA+AGG - chr2.1:6662216-6662235 MS.gene45508:CDS 40.0%
GTACTTGGCAGAAGAACATA+AGG - chr2.1:6662255-6662274 MS.gene45508:intron 40.0%
GTTATGTTATGACACGCCTT+TGG - chr2.1:6663659-6663678 MS.gene45508:CDS 40.0%
TACCTTAAAGCTGAAGACTG+AGG - chr2.1:6661393-6661412 MS.gene45508:intron 40.0%
TATAGTTGGCAAACACCTTC+AGG - chr2.1:6661288-6661307 MS.gene45508:intron 40.0%
TCAACAAACTCTGGTTGTTC+AGG - chr2.1:6662579-6662598 MS.gene45508:intron 40.0%
TCCTTACTCTATGGACCATT+TGG - chr2.1:6662096-6662115 MS.gene45508:CDS 40.0%
TGCAAATGAAAGCAATCGAG+TGG - chr2.1:6663499-6663518 MS.gene45508:CDS 40.0%
TTCCTCAGTCTTCAGCTTTA+AGG + chr2.1:6661398-6661417 None:intergenic 40.0%
TTCGTGAAGTCATTGTACCT+TGG + chr2.1:6663601-6663620 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG + chr2.1:6661461-6661480 None:intergenic 40.0%
TTGGAGATAGAAAGGCTGAA+AGG - chr2.1:6662439-6662458 MS.gene45508:intron 40.0%
TTTGATCCATCGCTTTCCTT+AGG + chr2.1:6661462-6661481 None:intergenic 40.0%
! CAACGGCCAATCCAAATTTT+CGG - chr2.1:6662950-6662969 MS.gene45508:intron 40.0%
! GGGACTTGAAAACTGTTTCT+GGG - chr2.1:6661317-6661336 MS.gene45508:intron 40.0%
! TGCTGGTGTTAGCACTTATT+TGG - chr2.1:6663776-6663795 MS.gene45508:CDS 40.0%
!! AGAGGGATTACTTGGCTTTA+CGG - chr2.1:6661200-6661219 MS.gene45508:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG + chr2.1:6660529-6660548 None:intergenic 40.0%
!! GTACCAGGAGAAAGTATCTA+AGG - chr2.1:6661745-6661764 MS.gene45508:intron 40.0%
!! TGCTAAACAGGCATTGGAAT+TGG - chr2.1:6662420-6662439 MS.gene45508:intron 40.0%
AAGGAGGAGCTGATCATGAA+CGG - chr2.1:6661037-6661056 MS.gene45508:CDS 45.0%
AATCGAGTGGTGCTCAAAGT+GGG - chr2.1:6663512-6663531 MS.gene45508:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG - chr2.1:6660538-6660557 MS.gene45508:CDS 45.0%
AGATAGACTCTTTGGGTGGA+TGG - chr2.1:6661237-6661256 MS.gene45508:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG + chr2.1:6663360-6663379 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG - chr2.1:6661443-6661462 MS.gene45508:intron 45.0%
ATGAGTACAACCCTAGTGGT+AGG - chr2.1:6663962-6663981 MS.gene45508:CDS 45.0%
ATGGGAAACACCTTCCTTCA+AGG + chr2.1:6664034-6664053 None:intergenic 45.0%
CAAAATGGAGCTGCAGGAAA+AGG - chr2.1:6662528-6662547 MS.gene45508:intron 45.0%
CAAACACCTTCAGGGAAATG+GGG - chr2.1:6661297-6661316 MS.gene45508:intron 45.0%
CAATTTGGAAGAGAGTGGGA+TGG - chr2.1:6661124-6661143 MS.gene45508:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG - chr2.1:6661808-6661827 MS.gene45508:intron 45.0%
CTGTGGTAAGAGGGATTACT+TGG - chr2.1:6661192-6661211 MS.gene45508:CDS 45.0%
GAAATTGGTAGAATCGGGTC+AGG - chr2.1:6663132-6663151 MS.gene45508:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG - chr2.1:6660892-6660911 MS.gene45508:intron 45.0%
GACAGCAAGCAAGTATGATG+AGG - chr2.1:6661426-6661445 MS.gene45508:intron 45.0%
GAGACATGCATCCAGAATTG+TGG - chr2.1:6660691-6660710 MS.gene45508:CDS 45.0%
GAGAGGACTTGATGCTAAAC+AGG - chr2.1:6662408-6662427 MS.gene45508:intron 45.0%
GCAAACACCTTCAGGGAAAT+GGG - chr2.1:6661296-6661315 MS.gene45508:intron 45.0%
GGAAAGAAGCTGAGGACAAT+AGG - chr2.1:6661338-6661357 MS.gene45508:intron 45.0%
GGAAATCAAAATGGAGCTGC+AGG - chr2.1:6662522-6662541 MS.gene45508:intron 45.0%
GGGGACTTGAAAACTGTTTC+TGG - chr2.1:6661316-6661335 MS.gene45508:intron 45.0%
GTATTGGGTACCTACCACTA+GGG + chr2.1:6663975-6663994 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG - chr2.1:6660940-6660959 MS.gene45508:intron 45.0%
TGACTCGAGCAGTGTTCTTT+GGG + chr2.1:6663359-6663378 None:intergenic 45.0%
TGTTGCTAAGCATTCAGCTC+TGG - chr2.1:6660739-6660758 MS.gene45508:intron 45.0%
TTTCCCTGCTATGAGCTGTA+TGG - chr2.1:6663807-6663826 MS.gene45508:CDS 45.0%
! CTGTCCGTTTTGCTACAACA+AGG - chr2.1:6660643-6660662 MS.gene45508:CDS 45.0%
!! ACTGCCCTTTGGAACTTTAG+AGG - chr2.1:6661079-6661098 MS.gene45508:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+GGG - chr2.1:6661201-6661220 MS.gene45508:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG - chr2.1:6661330-6661349 MS.gene45508:intron 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG - chr2.1:6661361-6661380 MS.gene45508:intron 50.0%
AAGGCTGAAAGGAGCTTTCC+AGG - chr2.1:6662450-6662469 MS.gene45508:intron 50.0%
AATTGTGGGTGACTCAGGTG+AGG - chr2.1:6660706-6660725 MS.gene45508:CDS 50.0%
ACCTGAGTCACCCACAATTC+TGG + chr2.1:6660705-6660724 None:intergenic 50.0%
ACTTTGAACGGATGCCAGCT+TGG + chr2.1:6663555-6663574 None:intergenic 50.0%
AGCGGGGAGATAGACTCTTT+GGG - chr2.1:6661230-6661249 MS.gene45508:CDS 50.0%
AGGAAGGAAGGCTTCCTTGA+AGG - chr2.1:6664017-6664036 MS.gene45508:CDS 50.0%
AGGAAGGCTTCCTTGAAGGA+AGG - chr2.1:6664021-6664040 MS.gene45508:CDS 50.0%
AGGAGGAGCTGATCATGAAC+GGG - chr2.1:6661038-6661057 MS.gene45508:CDS 50.0%
CAATCGAGTGGTGCTCAAAG+TGG - chr2.1:6663511-6663530 MS.gene45508:CDS 50.0%
CTCTTAGCTGCTTCCACGAA+TGG + chr2.1:6663420-6663439 None:intergenic 50.0%
CTGAGGACAATAGGAAAGCG+AGG - chr2.1:6661347-6661366 MS.gene45508:intron 50.0%
CTTCTGCAGATCCTTCTCAC+GGG + chr2.1:6661822-6661841 None:intergenic 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG - chr2.1:6661366-6661385 MS.gene45508:intron 50.0%
GCTTCTGCAGATCCTTCTCA+CGG + chr2.1:6661823-6661842 None:intergenic 50.0%
GGAAGAGGAATTAGAGGGTG+TGG - chr2.1:6662549-6662568 MS.gene45508:intron 50.0%
GGACAAAGAAGGGAACTCCA+AGG - chr2.1:6663581-6663600 MS.gene45508:CDS 50.0%
GGATCATGAAAAAGCCAGGC+TGG - chr2.1:6661766-6661785 MS.gene45508:intron 50.0%
GGCAAACACCTTCAGGGAAA+TGG - chr2.1:6661295-6661314 MS.gene45508:intron 50.0%
GGTACCCAATACCAGAACTC+TGG - chr2.1:6663983-6664002 MS.gene45508:CDS 50.0%
GGTCCATACAGCTCATAGCA+GGG + chr2.1:6663813-6663832 None:intergenic 50.0%
TAGCATCAAGTCCTCTCTCC+AGG + chr2.1:6662405-6662424 None:intergenic 50.0%
TCAAGTCCCCATTTCCCTGA+AGG + chr2.1:6661306-6661325 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG - chr2.1:6660701-6660720 MS.gene45508:CDS 50.0%
TGAAAAAGCCAGGCTGGAAC+TGG - chr2.1:6661772-6661791 MS.gene45508:intron 50.0%
TGGTCCATACAGCTCATAGC+AGG + chr2.1:6663814-6663833 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG - chr2.1:6661453-6661472 MS.gene45508:intron 50.0%
! GGTATTGGGTACCTACCACT+AGG + chr2.1:6663976-6663995 None:intergenic 50.0%
! TGCAGTAGCTACAGCTCTGA+AGG - chr2.1:6663933-6663952 MS.gene45508:CDS 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG - chr2.1:6661182-6661201 MS.gene45508:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG - chr2.1:6661183-6661202 MS.gene45508:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG - chr2.1:6661175-6661194 MS.gene45508:CDS 50.0%
!! TTACTTGGCTTTACGGGAGC+AGG - chr2.1:6661207-6661226 MS.gene45508:CDS 50.0%
AGAGATCAGCAAGATGCGGC+AGG - chr2.1:6661712-6661731 MS.gene45508:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG - chr2.1:6663903-6663922 MS.gene45508:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG - chr2.1:6661229-6661248 MS.gene45508:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG + chr2.1:6660636-6660655 None:intergenic 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr2.1:6662534-6662553 MS.gene45508:intron 55.0%
GGGGAGATAGACTCTTTGGG+TGG - chr2.1:6661233-6661252 MS.gene45508:CDS 55.0%
CCAGGCTGGAACTGGAAGCT+CGG - chr2.1:6661780-6661799 MS.gene45508:intron 60.0%
! GCAGGTTGAACGCGAGTACC+AGG - chr2.1:6661730-6661749 MS.gene45508:intron 60.0%
! TGGCTTTACGGGAGCAGGAG+CGG - chr2.1:6661212-6661231 MS.gene45508:CDS 60.0%
CCGAGCTTCCAGTTCCAGCC+TGG + chr2.1:6661783-6661802 None:intergenic 65.0%
GCTTTACGGGAGCAGGAGCG+GGG - chr2.1:6661214-6661233 MS.gene45508:CDS 65.0%
GGCTGGAACTGGAAGCTCGG+AGG - chr2.1:6661783-6661802 MS.gene45508:intron 65.0%
GGCTTTACGGGAGCAGGAGC+GGG - chr2.1:6661213-6661232 MS.gene45508:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 6660521 6664098 6660521 ID=MS.gene45508
chr2.1 mRNA 6660521 6664098 6660521 ID=MS.gene45508.t1;Parent=MS.gene45508
chr2.1 exon 6663108 6664098 6663108 ID=MS.gene45508.t1.exon1;Parent=MS.gene45508.t1
chr2.1 CDS 6663108 6664098 6663108 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
chr2.1 exon 6662724 6662905 6662724 ID=MS.gene45508.t1.exon2;Parent=MS.gene45508.t1
chr2.1 CDS 6662724 6662905 6662724 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
chr2.1 exon 6662343 6662411 6662343 ID=MS.gene45508.t1.exon3;Parent=MS.gene45508.t1
chr2.1 CDS 6662343 6662411 6662343 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
chr2.1 exon 6661968 6662252 6661968 ID=MS.gene45508.t1.exon4;Parent=MS.gene45508.t1
chr2.1 CDS 6661968 6662252 6661968 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
chr2.1 exon 6661017 6661274 6661017 ID=MS.gene45508.t1.exon5;Parent=MS.gene45508.t1
chr2.1 CDS 6661017 6661274 6661017 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
chr2.1 exon 6660521 6660754 6660521 ID=MS.gene45508.t1.exon6;Parent=MS.gene45508.t1
chr2.1 CDS 6660521 6660754 6660521 ID=cds.MS.gene45508.t1;Parent=MS.gene45508.t1
Gene Sequence

>MS.gene45508

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTTGAGCGAGCTATTGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAATTGCTGTTACTATTGATAATGATAAGACCCCTTGTGTTAGTATTGTTAATGATAAGTCGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGATGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAAAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTGCCCTTTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAATTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACGGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTTCAGGGAAATGGGGACTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAATAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACTGAGGAATTGGAACAGACAGCAAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAATTGTTTTAATTGATATTGGTGTTCTGTTTCTTTGATTTAGAGGAGAAACATTCTGGTTTTTACTACTATATCTATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATATTTCATGGTAGCTTAGTCTGTTTTATATTGTTTCATTAGAGATCAGCAAGATGCGGCAGGTTGAACGCGAGTACCAGGAGAAAGTATCTAAGGATCATGAAAAAGCCAGGCTGGAACTGGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAGCCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCGGGTCTTTTAATTTATGATAGCAATGCTAAATGAATTATTCTCTCCTTTTAACCTTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAAATTTTAACACATTTATTTGAAAGTGAGCAATTTACAGGAGAACTAAATTTGCTTCTTTTAAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTACTCTATGGACCATTTGGTCTTCTGTGTCAAATTATGTATACCAATCCCTCTTATTTTTCAATAACTTATGACATATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCATTAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTACTTGGCAGAAGAACATAAGGCACACTTTTCATTTTCCTATTACCTACAGTTTTTAGTTCAGCTGCATGTATATAATTATGTTTTGAGAACTCTAGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCTAAACAGGCATTGGAATTGGAGATAGAAAGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATAGATGAGAAGAAAAAATTGGAGGAAATCAAAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGTGTGGAAGATCTTCAACAAACTCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATAAATGTTAATTTTAATGTCTAATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATATATTGTTTTATTTGTATAAATTGCCTTGTAAAACTTAAGCAGAAATGTAGGATCATTTATATTTTTTAATTGACATACAGCTGTTTATATAATACTACTACTAAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACGTGTCTTGTTCACATGTATTTACAACGGCCAATCCAAATTTTCGGTGTTTTCAATTCAGTTTCTATATTTAAGGAATTTCACTTTATCAACGTATCATCTTATCACGTGAATAACTTGCTTGCTTATCTAAACTGTCTATTTGCTATCCAGTTGTTTGTGTCCAAAGATGATGATTGTAATTCATAAAATTTTACATTTTAGGTGAAATTGGTAGAATCGGGTCAGGTTTATGAAAAGAGCAGATTTTCTTTTTACATTTTCAGTTAATTTGTCATATTGTTTCATACTGGTTCAATCATAAGGTATCTGATACCTAAACTTGAAGCAAAATAAGTTCAAGTAGTTTGTTCCTGTTGCTTTGTTGCCATAATTTCATTGTTTATTTTGTCCAAGTAATTACATTTACTTGTACACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATCAAGCCATTCGTGGAAGCAGCTAAGAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGAGAATTTTCAGAGAAAGTGCAAATGAAAGCAATCGAGTGGTGCTCAAAGTGGGATGACTATGTTAAGGATCCAAGCTGGCATCCGTTCAAAGTTGTAACGGACAAAGAAGGGAACTCCAAGGTACAATGACTTCACGAATTATGTTTGTTCCTTAAAATTAATATTTTTTCTCAGCTGTTATGTTATGACACGCCTTTGGATATATTTATCCCCTAAAACATATAATGCACCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGGGTAGTGATCTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTTGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTAGATATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTCTGGAATTTTAGAGAAGGAAGGAAGGCTTCCTTGAAGGAAGGTGTTTCCCATTTAATTAAACAATGGAAGTTAAACAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene45508.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCPFCYNKDYYSLSELLRHASRIVGDSGEAVKDVAKHSALEMYIESYGDKLIAVTIDNDKTPCVSIVNDKSVNLSIANEKSLIMNDAEGHLGNVNDDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTALWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALREQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISKMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKAKLYFEKKHNEMALEEQQKADEKMMYLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDIDEKKKLEEIKMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFVEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDYVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDEFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWKLNKGKKAY