AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45534

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45534.t1 MTR_2g097700 93.208 795 39 4 1 794 1 781 0.0 1464
MS.gene45534.t1 MTR_4g064780 78.726 691 147 0 104 794 114 804 0.0 1178
MS.gene45534.t1 MTR_4g064780 75.758 528 128 0 104 631 114 641 0.0 872
MS.gene45534.t1 MTR_5g013940 89.000 100 11 0 629 728 20 119 5.63e-57 193
MS.gene45534.t1 MTR_2g098110 24.597 496 315 19 294 778 210 657 3.12e-24 108
MS.gene45534.t1 MTR_1g070230 31.156 199 110 7 589 778 157 337 4.16e-13 72.0
MS.gene45534.t1 MTR_2g087590 30.968 155 92 3 629 778 200 344 1.94e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45534.t1 AT3G46740 76.232 690 164 0 105 794 129 818 0.0 1149
MS.gene45534.t1 AT4G09080 62.169 415 136 7 382 794 1 396 3.74e-171 499
MS.gene45534.t1 AT4G09080 62.169 415 136 7 382 794 12 407 6.72e-171 499
MS.gene45534.t1 AT4G09080 70.462 325 93 3 472 794 2 325 4.14e-160 468
MS.gene45534.t1 AT1G35860 49.225 516 139 8 258 769 3 399 1.73e-154 456
MS.gene45534.t1 AT5G19620 24.597 496 325 15 294 782 269 722 1.79e-25 113
MS.gene45534.t1 AT3G44160 28.194 227 131 8 540 750 102 312 2.72e-13 72.8

Find 261 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2.1:+6406217 MS.gene45534:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2.1:-6406810 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2.1:-6409482 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2.1:-6406489 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2.1:+6406332 MS.gene45534:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2.1:-6409439 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2.1:+6406913 MS.gene45534:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.263241 2.1:+6405639 MS.gene45534:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2.1:+6405884 MS.gene45534:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2.1:+6409798 MS.gene45534:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2.1:+6406270 MS.gene45534:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2.1:-6406488 None:intergenic
GGAGTATGCACATCCATATT+TGG 0.314750 2.1:+6407357 MS.gene45534:CDS
TGGATGAAGTGCCACCAATA+TGG 0.315749 2.1:+6407470 MS.gene45534:CDS
GGTGGACATGGTGGTGGTGG+TGG 0.322426 2.1:+6405600 MS.gene45534:CDS
TTATCTACACCATCCAAATA+TGG 0.337762 2.1:-6407370 None:intergenic
GTGGCAGTGGTGGTGGAGGT+TGG 0.339631 2.1:+6405631 MS.gene45534:CDS
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2.1:+6409431 MS.gene45534:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2.1:-6406212 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2.1:-6407196 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2.1:+6406218 MS.gene45534:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2.1:+6405642 MS.gene45534:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2.1:+6407630 MS.gene45534:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2.1:+6406208 MS.gene45534:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.368723 2.1:+6405624 MS.gene45534:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2.1:+6409603 MS.gene45534:CDS
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2.1:+6409714 MS.gene45534:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2.1:+6405663 MS.gene45534:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2.1:+6409645 MS.gene45534:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2.1:+6405660 MS.gene45534:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2.1:+6406277 MS.gene45534:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2.1:+6407687 MS.gene45534:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2.1:+6406159 MS.gene45534:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2.1:+6405969 MS.gene45534:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2.1:+6406027 MS.gene45534:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2.1:+6406252 MS.gene45534:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2.1:-6409615 None:intergenic
GCAGTGGTGGTGGAGGTTGG+TGG 0.409155 2.1:+6405634 MS.gene45534:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2.1:+6407641 MS.gene45534:CDS
CCACCGCGATCAACCCATAT+TGG 0.412791 2.1:-6407484 None:intergenic
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2.1:+6405651 MS.gene45534:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2.1:+6405885 MS.gene45534:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2.1:-6409277 None:intergenic
GGTGGTGGACATGGTGGTGG+TGG 0.421380 2.1:+6405597 MS.gene45534:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2.1:-6406887 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2.1:-6409270 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2.1:+6406806 MS.gene45534:CDS
TGAATACTGGACTCAGCTTT+CGG 0.430080 2.1:-6407432 None:intergenic
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2.1:+6405594 MS.gene45534:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2.1:-6409318 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2.1:-6405535 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2.1:+6405621 MS.gene45534:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2.1:+6409432 MS.gene45534:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2.1:+6409589 MS.gene45534:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2.1:+6405923 MS.gene45534:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2.1:-6405529 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2.1:+6406781 MS.gene45534:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2.1:+6407753 MS.gene45534:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2.1:-6405765 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2.1:+6409720 MS.gene45534:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2.1:-6406893 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2.1:-6405511 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2.1:+6405645 MS.gene45534:CDS
GGTGGTGGTGGTGGAAGTAA+TGG 0.462440 2.1:+6405609 MS.gene45534:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2.1:-6409276 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2.1:+6409737 MS.gene45534:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2.1:-6409745 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2.1:+6406416 MS.gene45534:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2.1:+6409367 MS.gene45534:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2.1:-6407205 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2.1:+6405657 MS.gene45534:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2.1:-6405570 None:intergenic
TGGTGGCACTTCATCCAGCC+CGG 0.473493 2.1:-6407464 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2.1:-6405487 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2.1:+6407336 MS.gene45534:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2.1:-6409361 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2.1:+6406302 MS.gene45534:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2.1:-6405415 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2.1:+6409777 MS.gene45534:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2.1:+6409732 MS.gene45534:CDS
AACCTCACAAACAACCTCAT+TGG 0.481846 2.1:-6406366 None:intergenic
GGTTACAACATGGGTGAACT+TGG 0.484076 2.1:+6409454 MS.gene45534:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2.1:-6405517 None:intergenic
AAGCTGAGTCCAGTATTCAC+TGG 0.485593 2.1:+6407436 MS.gene45534:CDS
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2.1:+6406271 MS.gene45534:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2.1:-6407394 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2.1:+6406925 MS.gene45534:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2.1:-6406467 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2.1:-6409375 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2.1:+6405618 MS.gene45534:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2.1:+6407114 MS.gene45534:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2.1:-6405571 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2.1:+6406142 MS.gene45534:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2.1:+6405738 MS.gene45534:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2.1:-6405510 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2.1:+6405942 MS.gene45534:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2.1:-6406989 None:intergenic
GTTGTTTGTGAGGTTGTTGA+AGG 0.494123 2.1:+6406374 MS.gene45534:CDS
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2.1:-6405488 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2.1:+6407828 MS.gene45534:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2.1:-6409693 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2.1:+6409358 MS.gene45534:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2.1:+6405582 MS.gene45534:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2.1:-6405458 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2.1:+6406166 MS.gene45534:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2.1:+6409688 MS.gene45534:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2.1:+6405576 MS.gene45534:CDS
AGCTGAGTCCAGTATTCACT+GGG 0.498536 2.1:+6407437 MS.gene45534:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2.1:+6409444 MS.gene45534:CDS
GGTGGCACTTCATCCAGCCC+GGG 0.498938 2.1:-6407463 None:intergenic
AACAGCTTACATGAAGAGTT+CGG 0.499486 2.1:-6407402 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2.1:-6405459 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2.1:+6409618 MS.gene45534:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2.1:-6409438 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2.1:+6405405 MS.gene45534:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2.1:+6406062 MS.gene45534:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2.1:+6406237 MS.gene45534:CDS
GGATGAAGTGCCACCAATAT+GGG 0.507612 2.1:+6407471 MS.gene45534:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2.1:-6406104 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2.1:+6406004 MS.gene45534:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2.1:-6405397 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2.1:+6405588 MS.gene45534:CDS
AATGGTGGCAGTGGTGGTGG+AGG 0.516851 2.1:+6405627 MS.gene45534:CDS
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2.1:+6405970 MS.gene45534:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2.1:+6407848 MS.gene45534:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2.1:-6407007 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2.1:+6409232 MS.gene45534:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2.1:+6405996 MS.gene45534:CDS
GGTGGTGGTGGAAGTAATGG+TGG 0.524691 2.1:+6405612 MS.gene45534:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2.1:+6409696 MS.gene45534:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2.1:+6406957 MS.gene45534:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2.1:-6405497 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2.1:-6405553 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2.1:+6409244 MS.gene45534:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2.1:+6409433 MS.gene45534:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2.1:+6405387 MS.gene45534:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2.1:-6407757 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2.1:+6409666 MS.gene45534:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2.1:-6405541 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2.1:+6409702 MS.gene45534:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2.1:+6406172 MS.gene45534:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2.1:-6409409 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2.1:+6406094 MS.gene45534:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2.1:-6405578 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2.1:+6406782 MS.gene45534:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2.1:+6406322 MS.gene45534:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2.1:-6405557 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2.1:+6409474 MS.gene45534:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2.1:+6409695 MS.gene45534:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2.1:-6407753 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2.1:+6406120 MS.gene45534:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2.1:+6405956 MS.gene45534:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2.1:+6409370 MS.gene45534:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2.1:+6406177 MS.gene45534:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2.1:-6405520 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2.1:+6409667 MS.gene45534:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2.1:+6407744 MS.gene45534:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2.1:+6409238 MS.gene45534:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2.1:+6406994 MS.gene45534:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2.1:-6405547 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2.1:-6405451 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2.1:-6405450 None:intergenic
CCGCGATCAACCCATATTGG+TGG 0.564600 2.1:-6407481 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2.1:-6405903 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2.1:+6406431 MS.gene45534:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2.1:-6409255 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2.1:-6409357 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2.1:+6409312 MS.gene45534:CDS
TGGAAATCTTAATACCAATG+AGG 0.574012 2.1:+6406352 MS.gene45534:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2.1:+6405917 MS.gene45534:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2.1:-6405708 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2.1:+6405901 MS.gene45534:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2.1:-6405483 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2.1:+6407171 MS.gene45534:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2.1:-6405523 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2.1:+6407206 MS.gene45534:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2.1:-6405376 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2.1:+6406162 MS.gene45534:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2.1:+6407150 MS.gene45534:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2.1:-6406200 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2.1:-6406003 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2.1:+6406147 MS.gene45534:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2.1:+6406870 MS.gene45534:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2.1:-6406988 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2.1:+6406971 MS.gene45534:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2.1:+6409319 MS.gene45534:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2.1:+6406475 MS.gene45534:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2.1:+6405654 MS.gene45534:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2.1:+6405579 MS.gene45534:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2.1:+6409325 MS.gene45534:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2.1:-6405512 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2.1:+6406028 MS.gene45534:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2.1:+6406977 MS.gene45534:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2.1:-6406219 None:intergenic
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2.1:-6405538 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2.1:+6406115 MS.gene45534:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2.1:-6409269 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2.1:+6409379 MS.gene45534:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2.1:+6409445 MS.gene45534:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2.1:-6409355 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2.1:-6409291 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2.1:+6407726 MS.gene45534:CDS
TGGTACTGGCATTGATCACA+TGG 0.604743 2.1:+6407767 MS.gene45534:CDS
TACCAATGAGGTTGTTTGTG+AGG 0.605504 2.1:+6406364 MS.gene45534:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2.1:+6407361 MS.gene45534:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2.1:+6406148 MS.gene45534:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2.1:+6407711 MS.gene45534:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2.1:-6405393 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2.1:-6409294 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2.1:-6409692 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2.1:-6406092 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2.1:-6407750 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2.1:+6406228 MS.gene45534:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2.1:-6409356 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2.1:+6406981 MS.gene45534:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2.1:-6405592 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2.1:+6405591 MS.gene45534:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2.1:+6406937 MS.gene45534:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2.1:+6406980 MS.gene45534:CDS
GTGGCACTTCATCCAGCCCG+GGG 0.624430 2.1:-6407462 None:intergenic
CCATGGAGGACAAGAACTGG+CGG 0.627462 2.1:-6409358 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2.1:+6409656 MS.gene45534:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2.1:+6406303 MS.gene45534:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2.1:+6409315 MS.gene45534:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2.1:+6406890 MS.gene45534:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2.1:+6405987 MS.gene45534:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2.1:+6409771 MS.gene45534:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2.1:-6406466 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2.1:+6406121 MS.gene45534:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2.1:+6406288 MS.gene45534:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2.1:+6407666 MS.gene45534:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2.1:+6407117 MS.gene45534:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2.1:-6406800 None:intergenic
ACACCTTTAATATTGAAGCA+GGG 0.649166 2.1:+6406807 MS.gene45534:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2.1:+6406031 MS.gene45534:CDS
CCAATATGGGTTGATCGCGG+TGG 0.652292 2.1:+6407484 MS.gene45534:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2.1:-6409775 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2.1:-6407132 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2.1:+6406889 MS.gene45534:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2.1:+6406893 MS.gene45534:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2.1:+6405780 MS.gene45534:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2.1:+6405390 MS.gene45534:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2.1:-6407121 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2.1:+6409290 MS.gene45534:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2.1:+6407705 MS.gene45534:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2.1:+6405902 MS.gene45534:CDS
CCACCAATATGGGTTGATCG+CGG 0.691172 2.1:+6407481 MS.gene45534:CDS
TGTCAAAGCTAATATTACAG+AGG 0.693959 2.1:+6407507 MS.gene45534:CDS
CTGAGTCCAGTATTCACTGG+GGG 0.694649 2.1:+6407439 MS.gene45534:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2.1:-6409381 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2.1:-6409372 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2.1:-6407723 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2.1:+6407747 MS.gene45534:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2.1:+6405888 MS.gene45534:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2.1:-6407630 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2.1:+6407708 MS.gene45534:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2.1:+6409477 MS.gene45534:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2.1:-6407761 None:intergenic
GCTGAGTCCAGTATTCACTG+GGG 0.777122 2.1:+6407438 MS.gene45534:CDS
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2.1:-6405494 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2.1:-6406465 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2.1:6409084-6409103 MS.gene45534:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2.1:6409057-6409076 None:intergenic 10.0%
!! AACATAATTGATTACTAAAA+AGG + chr2.1:6408993-6409012 MS.gene45534:intron 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2.1:6406492-6406511 None:intergenic 15.0%
!! ATATTATATTATACCTCTTT+GGG - chr2.1:6406491-6406510 None:intergenic 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2.1:6408684-6408703 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG + chr2.1:6406542-6406561 MS.gene45534:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG + chr2.1:6406625-6406644 MS.gene45534:intron 15.0%
!!! CACATTAAAAATTTTGTTTT+AGG + chr2.1:6409108-6409127 MS.gene45534:intron 15.0%
!!! CTAAAACAAAATTTTTAATG+TGG - chr2.1:6409110-6409129 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2.1:6408933-6408952 None:intergenic 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2.1:6407549-6407568 MS.gene45534:intron 15.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2.1:6407964-6407983 None:intergenic 20.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2.1:6405768-6405787 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2.1:6408116-6408135 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2.1:6407983-6408002 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG - chr2.1:6408190-6408209 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2.1:6408907-6408926 MS.gene45534:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2.1:6407930-6407949 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG + chr2.1:6406541-6406560 MS.gene45534:intron 20.0%
!! TTGAAATGAAAGAACATTTA+GGG - chr2.1:6408189-6408208 None:intergenic 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2.1:6407990-6408009 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2.1:6407928-6407947 MS.gene45534:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2.1:6407282-6407301 MS.gene45534:intron 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2.1:6407983-6408002 MS.gene45534:intron 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2.1:6408907-6408926 None:intergenic 20.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2.1:6406062-6406081 MS.gene45534:CDS 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2.1:6408247-6408266 None:intergenic 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2.1:6406661-6406680 None:intergenic 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2.1:6406913-6406932 MS.gene45534:CDS 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2.1:6409156-6409175 None:intergenic 25.0%
! CTTATTGTTGTCAATTTAGA+GGG + chr2.1:6406579-6406598 MS.gene45534:intron 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2.1:6408357-6408376 MS.gene45534:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2.1:6408095-6408114 None:intergenic 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2.1:6409155-6409174 None:intergenic 25.0%
! TCTTATTGTTGTCAATTTAG+AGG + chr2.1:6406578-6406597 MS.gene45534:intron 25.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2.1:6405884-6405903 MS.gene45534:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2.1:6406925-6406944 MS.gene45534:CDS 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2.1:6409516-6409535 None:intergenic 25.0%
! TTATCTGTTATATATATGGG+AGG + chr2.1:6406545-6406564 MS.gene45534:intron 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2.1:6408927-6408946 MS.gene45534:intron 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2.1:6408359-6408378 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2.1:6409222-6409241 MS.gene45534:intron 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2.1:6407098-6407117 MS.gene45534:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2.1:6408508-6408527 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2.1:6406859-6406878 MS.gene45534:CDS 25.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2.1:6409009-6409028 MS.gene45534:intron 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2.1:6406806-6406825 MS.gene45534:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2.1:6405843-6405862 MS.gene45534:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2.1:6406807-6406826 MS.gene45534:CDS 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2.1:6407556-6407575 MS.gene45534:intron 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2.1:6406107-6406126 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2.1:6408208-6408227 MS.gene45534:intron 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2.1:6405956-6405975 MS.gene45534:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2.1:6405780-6405799 MS.gene45534:CDS 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2.1:6407641-6407660 MS.gene45534:CDS 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2.1:6406665-6406684 MS.gene45534:intron 30.0%
GAAAAAAAAAAATCCCTTGG+TGG - chr2.1:6407059-6407078 None:intergenic 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2.1:6405885-6405904 MS.gene45534:CDS 30.0%
GCAGAAAAAAAAAAATCCCT+TGG - chr2.1:6407062-6407081 None:intergenic 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2.1:6407687-6407706 MS.gene45534:CDS 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2.1:6408383-6408402 MS.gene45534:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2.1:6408013-6408032 None:intergenic 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2.1:6408216-6408235 None:intergenic 30.0%
TATATATATGGGAGGTTCAT+AGG + chr2.1:6406553-6406572 MS.gene45534:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2.1:6406729-6406748 MS.gene45534:intron 30.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2.1:6405738-6405757 MS.gene45534:CDS 30.0%
TGGAAATCTTAATACCAATG+AGG + chr2.1:6406352-6406371 MS.gene45534:CDS 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2.1:6407507-6407526 MS.gene45534:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2.1:6407373-6407392 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2.1:6408150-6408169 None:intergenic 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2.1:6408841-6408860 MS.gene45534:intron 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2.1:6407886-6407905 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2.1:6409412-6409431 MS.gene45534:CDS 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2.1:6408842-6408861 MS.gene45534:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2.1:6408729-6408748 MS.gene45534:intron 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2.1:6409798-6409817 MS.gene45534:CDS 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2.1:6406737-6406756 None:intergenic 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2.1:6406672-6406691 MS.gene45534:intron 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2.1:6405970-6405989 MS.gene45534:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2.1:6405969-6405988 MS.gene45534:CDS 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2.1:6409412-6409431 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2.1:6407139-6407158 MS.gene45534:CDS 30.0%
!! TAATCAGAAAGTATTGTCAC+AGG - chr2.1:6409197-6409216 None:intergenic 30.0%
!! TAGTCTATAGTTTGCTATAG+CGG + chr2.1:6408442-6408461 MS.gene45534:intron 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2.1:6406803-6406822 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2.1:6407894-6407913 MS.gene45534:intron 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2.1:6406028-6406047 MS.gene45534:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2.1:6406027-6406046 MS.gene45534:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2.1:6409805-6409824 MS.gene45534:CDS 30.0%
AAAAAATAGTCCATCAACGG+AGG - chr2.1:6408244-6408263 None:intergenic 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2.1:6406937-6406956 MS.gene45534:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2.1:6407405-6407424 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2.1:6408738-6408757 None:intergenic 35.0%
AATGTGTAGTTAGAGCTCAA+TGG - chr2.1:6408774-6408793 None:intergenic 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2.1:6408395-6408414 MS.gene45534:intron 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2.1:6406222-6406241 None:intergenic 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2.1:6406218-6406237 MS.gene45534:CDS 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2.1:6408340-6408359 MS.gene45534:intron 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2.1:6406303-6406322 MS.gene45534:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2.1:6409778-6409797 None:intergenic 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2.1:6406215-6406234 None:intergenic 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2.1:6408835-6408854 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2.1:6407630-6407649 MS.gene45534:CDS 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2.1:6407633-6407652 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2.1:6406870-6406889 MS.gene45534:CDS 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2.1:6408391-6408410 None:intergenic 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2.1:6406813-6406832 None:intergenic 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2.1:6409667-6409686 MS.gene45534:CDS 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2.1:6409656-6409675 MS.gene45534:CDS 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2.1:6407336-6407355 MS.gene45534:intron 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2.1:6406416-6406435 MS.gene45534:CDS 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2.1:6409151-6409170 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2.1:6408394-6408413 MS.gene45534:intron 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2.1:6406217-6406236 MS.gene45534:CDS 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2.1:6406271-6406290 MS.gene45534:CDS 35.0%
TATGCACATCCATATTTGGA+TGG + chr2.1:6407361-6407380 MS.gene45534:CDS 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2.1:6407135-6407154 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2.1:6408795-6408814 MS.gene45534:intron 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2.1:6409441-6409460 None:intergenic 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2.1:6405942-6405961 MS.gene45534:CDS 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2.1:6409442-6409461 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2.1:6408737-6408756 MS.gene45534:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2.1:6406673-6406692 MS.gene45534:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2.1:6407043-6407062 MS.gene45534:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2.1:6406763-6406782 MS.gene45534:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2.1:6408732-6408751 None:intergenic 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2.1:6407816-6407835 MS.gene45534:CDS 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2.1:6409415-6409434 MS.gene45534:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2.1:6407042-6407061 MS.gene45534:intron 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2.1:6406332-6406351 MS.gene45534:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2.1:6408231-6408250 MS.gene45534:intron 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2.1:6407315-6407334 MS.gene45534:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2.1:6406750-6406769 MS.gene45534:intron 35.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG - chr2.1:6405431-6405450 None:intergenic 35.0%
!!! GTTTTGGAGAGAGGTTTTAA+TGG + chr2.1:6409814-6409833 MS.gene45534:CDS 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2.1:6405689-6405708 MS.gene45534:CDS 35.0%
AACAACCCGATATCCTAAAC+AGG - chr2.1:6406681-6406700 None:intergenic 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2.1:6406147-6406166 MS.gene45534:CDS 40.0%
AACCTCACAAACAACCTCAT+TGG - chr2.1:6406369-6406388 None:intergenic 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2.1:6406252-6406271 MS.gene45534:CDS 40.0%
AAGCTCTCTATGTATCACAG+GGG - chr2.1:6406468-6406487 None:intergenic 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2.1:6406431-6406450 MS.gene45534:CDS 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2.1:6407242-6407261 None:intergenic 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2.1:6409696-6409715 MS.gene45534:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2.1:6406148-6406167 MS.gene45534:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2.1:6406203-6406222 None:intergenic 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2.1:6405888-6405907 MS.gene45534:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2.1:6409714-6409733 MS.gene45534:CDS 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2.1:6409696-6409715 None:intergenic 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2.1:6409720-6409739 MS.gene45534:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2.1:6406302-6406321 MS.gene45534:CDS 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2.1:6407321-6407340 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2.1:6408227-6408246 None:intergenic 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2.1:6406270-6406289 MS.gene45534:CDS 40.0%
GAAGCTCTCTATGTATCACA+GGG - chr2.1:6406469-6406488 None:intergenic 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2.1:6409603-6409622 MS.gene45534:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2.1:6409666-6409685 MS.gene45534:CDS 40.0%
GGAGTATGCACATCCATATT+TGG + chr2.1:6407357-6407376 MS.gene45534:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2.1:6406115-6406134 MS.gene45534:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2.1:6406142-6406161 MS.gene45534:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2.1:6409777-6409796 MS.gene45534:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2.1:6406277-6406296 MS.gene45534:CDS 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2.1:6406374-6406393 MS.gene45534:CDS 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2.1:6409297-6409316 None:intergenic 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2.1:6409618-6409637 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2.1:6409695-6409714 MS.gene45534:CDS 40.0%
TACCAATGAGGTTGTTTGTG+AGG + chr2.1:6406364-6406383 MS.gene45534:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2.1:6409771-6409790 MS.gene45534:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2.1:6409445-6409464 MS.gene45534:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2.1:6407435-6407454 None:intergenic 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2.1:6406121-6406140 MS.gene45534:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2.1:6406228-6406247 MS.gene45534:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2.1:6406237-6406256 MS.gene45534:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2.1:6406288-6406307 MS.gene45534:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2.1:6409695-6409714 None:intergenic 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2.1:6409444-6409463 MS.gene45534:CDS 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2.1:6409125-6409144 MS.gene45534:intron 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2.1:6406208-6406227 MS.gene45534:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2.1:6407828-6407847 MS.gene45534:CDS 40.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2.1:6405564-6405583 MS.gene45534:CDS 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2.1:6406971-6406990 MS.gene45534:CDS 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2.1:6408846-6408865 MS.gene45534:intron 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2.1:6407010-6407029 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2.1:6407199-6407218 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2.1:6409618-6409637 MS.gene45534:CDS 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2.1:6409312-6409331 MS.gene45534:CDS 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2.1:6409124-6409143 MS.gene45534:intron 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2.1:6407705-6407724 MS.gene45534:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2.1:6406031-6406050 MS.gene45534:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2.1:6408158-6408177 None:intergenic 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2.1:6409634-6409653 MS.gene45534:CDS 40.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2.1:6407436-6407455 MS.gene45534:CDS 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2.1:6405996-6406015 MS.gene45534:CDS 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2.1:6406475-6406494 MS.gene45534:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2.1:6407397-6407416 None:intergenic 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2.1:6407437-6407456 MS.gene45534:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2.1:6408401-6408420 MS.gene45534:intron 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2.1:6406781-6406800 MS.gene45534:intron 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2.1:6406004-6406023 MS.gene45534:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2.1:6406006-6406025 None:intergenic 45.0%
CTCGTTCCATCCAACAACTT+CGG + chr2.1:6405387-6405406 MS.gene45534:CDS 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2.1:6406120-6406139 MS.gene45534:CDS 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2.1:6407666-6407685 MS.gene45534:CDS 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2.1:6409272-6409291 None:intergenic 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2.1:6409688-6409707 MS.gene45534:CDS 45.0%
GGAAGCTCTCTATGTATCAC+AGG - chr2.1:6406470-6406489 None:intergenic 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2.1:6407171-6407190 MS.gene45534:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2.1:6409454-6409473 MS.gene45534:CDS 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2.1:6408407-6408426 MS.gene45534:intron 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2.1:6406172-6406191 MS.gene45534:CDS 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2.1:6408546-6408565 MS.gene45534:intron 45.0%
TCCAACTTGCACTACCTTTG+AGG + chr2.1:6408818-6408837 MS.gene45534:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG - chr2.1:6408822-6408841 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2.1:6409232-6409251 MS.gene45534:intron 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2.1:6407848-6407867 MS.gene45534:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2.1:6409432-6409451 MS.gene45534:CDS 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2.1:6408545-6408564 MS.gene45534:intron 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2.1:6405453-6405472 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2.1:6405550-6405569 None:intergenic 45.0%
! AACTCAATCGGCTTTGTCTG+CGG - chr2.1:6406095-6406114 None:intergenic 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2.1:6408545-6408564 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2.1:6405461-6405480 None:intergenic 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2.1:6407471-6407490 MS.gene45534:CDS 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2.1:6409315-6409334 MS.gene45534:CDS 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2.1:6405462-6405481 None:intergenic 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2.1:6407470-6407489 MS.gene45534:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2.1:6409431-6409450 MS.gene45534:CDS 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2.1:6405556-6405575 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2.1:6409280-6409299 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2.1:6405560-6405579 None:intergenic 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2.1:6409633-6409652 MS.gene45534:CDS 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2.1:6409279-6409298 None:intergenic 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2.1:6407767-6407786 MS.gene45534:CDS 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2.1:6407150-6407169 MS.gene45534:CDS 45.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2.1:6406889-6406908 MS.gene45534:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2.1:6409294-6409313 None:intergenic 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2.1:6408547-6408566 MS.gene45534:intron 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2.1:6406890-6406909 MS.gene45534:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2.1:6406322-6406341 MS.gene45534:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2.1:6406980-6406999 MS.gene45534:CDS 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2.1:6409589-6409608 MS.gene45534:intron 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2.1:6407206-6407225 MS.gene45534:CDS 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2.1:6408528-6408547 MS.gene45534:intron 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2.1:6407208-6407227 None:intergenic 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2.1:6407439-6407458 MS.gene45534:CDS 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2.1:6407616-6407635 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2.1:6409321-6409340 None:intergenic 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2.1:6405987-6406006 MS.gene45534:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG + chr2.1:6406094-6406113 MS.gene45534:CDS 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2.1:6409645-6409664 MS.gene45534:CDS 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2.1:6409290-6409309 MS.gene45534:CDS 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2.1:6407438-6407457 MS.gene45534:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2.1:6409273-6409292 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2.1:6405923-6405942 MS.gene45534:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2.1:6409433-6409452 MS.gene45534:CDS 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2.1:6409244-6409263 MS.gene45534:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2.1:6406981-6407000 MS.gene45534:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2.1:6409702-6409721 MS.gene45534:CDS 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2.1:6405573-6405592 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2.1:6405390-6405409 MS.gene45534:CDS 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2.1:6405454-6405473 None:intergenic 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2.1:6405711-6405730 None:intergenic 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2.1:6409485-6409504 None:intergenic 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2.1:6407726-6407745 None:intergenic 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2.1:6409748-6409767 None:intergenic 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2.1:6406782-6406801 MS.gene45534:intron 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2.1:6406162-6406181 MS.gene45534:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2.1:6407124-6407143 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2.1:6409319-6409338 MS.gene45534:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2.1:6406957-6406976 MS.gene45534:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2.1:6406166-6406185 MS.gene45534:CDS 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2.1:6405574-6405593 None:intergenic 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2.1:6406159-6406178 MS.gene45534:CDS 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2.1:6406890-6406909 None:intergenic 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2.1:6407869-6407888 None:intergenic 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2.1:6406977-6406996 MS.gene45534:CDS 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2.1:6405651-6405670 MS.gene45534:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2.1:6407224-6407243 None:intergenic 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2.1:6407711-6407730 MS.gene45534:CDS 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2.1:6407481-6407500 MS.gene45534:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2.1:6405676-6405695 MS.gene45534:CDS 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2.1:6407708-6407727 MS.gene45534:CDS 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2.1:6407726-6407745 MS.gene45534:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2.1:6409732-6409751 MS.gene45534:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2.1:6409737-6409756 MS.gene45534:CDS 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG - chr2.1:6405427-6405446 None:intergenic 50.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2.1:6406177-6406196 MS.gene45534:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2.1:6405624-6405643 MS.gene45534:CDS 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2.1:6409325-6409344 MS.gene45534:CDS 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2.1:6407487-6407506 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2.1:6407484-6407503 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2.1:6406893-6406912 MS.gene45534:CDS 55.0%
CGCCTACACAACCACCATAG+CGG - chr2.1:6409384-6409403 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2.1:6408548-6408567 MS.gene45534:intron 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2.1:6405500-6405519 None:intergenic 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2.1:6409591-6409610 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2.1:6409238-6409257 MS.gene45534:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2.1:6408888-6408907 None:intergenic 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2.1:6407764-6407783 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2.1:6408881-6408900 MS.gene45534:intron 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2.1:6409481-6409500 MS.gene45534:intron 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2.1:6405621-6405640 MS.gene45534:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2.1:6405618-6405637 MS.gene45534:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2.1:6407114-6407133 MS.gene45534:intron 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2.1:6405902-6405921 MS.gene45534:CDS 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2.1:6408889-6408908 None:intergenic 55.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2.1:6405497-6405516 None:intergenic 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2.1:6409477-6409496 MS.gene45534:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2.1:6405901-6405920 MS.gene45534:CDS 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2.1:6405576-6405595 MS.gene45534:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2.1:6406991-6407010 None:intergenic 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2.1:6405657-6405676 MS.gene45534:CDS 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2.1:6408880-6408899 None:intergenic 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2.1:6405670-6405689 MS.gene45534:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2.1:6405917-6405936 MS.gene45534:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2.1:6406896-6406915 None:intergenic 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2.1:6405654-6405673 MS.gene45534:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2.1:6405588-6405607 MS.gene45534:CDS 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2.1:6406994-6407013 MS.gene45534:CDS 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2.1:6407484-6407503 MS.gene45534:CDS 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2.1:6407225-6407244 None:intergenic 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2.1:6405612-6405631 MS.gene45534:CDS 55.0%
!! GGTGGTGGTGGTGGAAGTAA+TGG + chr2.1:6405609-6405628 MS.gene45534:CDS 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2.1:6409474-6409493 MS.gene45534:CDS 55.0%
AATGCCAGTACCACCGAGGC+TGG - chr2.1:6407760-6407779 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2.1:6405532-6405551 None:intergenic 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2.1:6405595-6405614 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2.1:6405544-6405563 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2.1:6408873-6408892 MS.gene45534:intron 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2.1:6407117-6407136 MS.gene45534:intron 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2.1:6405579-6405598 MS.gene45534:CDS 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2.1:6407744-6407763 MS.gene45534:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2.1:6405906-6405925 None:intergenic 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2.1:6409258-6409277 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG + chr2.1:6409379-6409398 MS.gene45534:CDS 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2.1:6408874-6408893 MS.gene45534:intron 60.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2.1:6405396-6405415 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2.1:6406992-6407011 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2.1:6405491-6405510 None:intergenic 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2.1:6405582-6405601 MS.gene45534:CDS 60.0%
TGGAGGACAAGAACTGGCGG+GGG - chr2.1:6409358-6409377 None:intergenic 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2.1:6407467-6407486 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG + chr2.1:6405405-6405424 MS.gene45534:CDS 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2.1:6405490-6405509 None:intergenic 60.0%
TTTGCGACGGCCGGACAAGA+TGG - chr2.1:6405418-6405437 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2.1:6408461-6408480 MS.gene45534:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2.1:6408872-6408891 None:intergenic 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2.1:6408854-6408873 MS.gene45534:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2.1:6408853-6408872 MS.gene45534:intron 60.0%
!! AATGGTGGCAGTGGTGGTGG+AGG + chr2.1:6405627-6405646 MS.gene45534:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2.1:6405591-6405610 MS.gene45534:CDS 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2.1:6405594-6405613 MS.gene45534:CDS 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2.1:6405581-6405600 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2.1:6405400-6405419 None:intergenic 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG + chr2.1:6405645-6405664 MS.gene45534:CDS 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2.1:6409129-6409148 MS.gene45534:intron 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG + chr2.1:6405642-6405661 MS.gene45534:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG + chr2.1:6405639-6405658 MS.gene45534:CDS 60.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2.1:6409355-6409374 None:intergenic 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2.1:6407446-6407465 MS.gene45534:CDS 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2.1:6407756-6407775 None:intergenic 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2.1:6407445-6407464 MS.gene45534:CDS 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2.1:6407753-6407772 MS.gene45534:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2.1:6405663-6405682 MS.gene45534:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2.1:6405660-6405679 MS.gene45534:CDS 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2.1:6409134-6409153 None:intergenic 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2.1:6408868-6408887 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2.1:6407466-6407485 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2.1:6407753-6407772 None:intergenic 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2.1:6407465-6407484 None:intergenic 65.0%
!! GCAGTGGTGGTGGAGGTTGG+TGG + chr2.1:6405634-6405653 MS.gene45534:CDS 65.0%
!! GGTGGACATGGTGGTGGTGG+TGG + chr2.1:6405600-6405619 MS.gene45534:CDS 65.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2.1:6405597-6405616 MS.gene45534:CDS 65.0%
!! GTGGCAGTGGTGGTGGAGGT+TGG + chr2.1:6405631-6405650 MS.gene45534:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2.1:6405486-6405505 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2.1:6405526-6405545 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2.1:6407448-6407467 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2.1:6407747-6407766 MS.gene45534:CDS 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2.1:6405520-6405539 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2.1:6405541-6405560 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2.1:6405515-6405534 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2.1:6405514-6405533 None:intergenic 70.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2.1:6407450-6407469 MS.gene45534:CDS 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2.1:6408862-6408881 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2.1:6405538-6405557 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2.1:6405523-6405542 None:intergenic 75.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2.1:6405513-6405532 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 6405378 6409833 6405378 ID=MS.gene45534
chr2.1 mRNA 6405378 6409833 6405378 ID=MS.gene45534.t1;Parent=MS.gene45534
chr2.1 exon 6405378 6406496 6405378 ID=MS.gene45534.t1.exon1;Parent=MS.gene45534.t1
chr2.1 CDS 6405378 6406496 6405378 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6406794 6407015 6406794 ID=MS.gene45534.t1.exon2;Parent=MS.gene45534.t1
chr2.1 CDS 6406794 6407015 6406794 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6407120 6407227 6407120 ID=MS.gene45534.t1.exon3;Parent=MS.gene45534.t1
chr2.1 CDS 6407120 6407227 6407120 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6407337 6407528 6407337 ID=MS.gene45534.t1.exon4;Parent=MS.gene45534.t1
chr2.1 CDS 6407337 6407528 6407337 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6407621 6407869 6407621 ID=MS.gene45534.t1.exon5;Parent=MS.gene45534.t1
chr2.1 CDS 6407621 6407869 6407621 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6409244 6409498 6409244 ID=MS.gene45534.t1.exon6;Parent=MS.gene45534.t1
chr2.1 CDS 6409244 6409498 6409244 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
chr2.1 exon 6409594 6409833 6409594 ID=MS.gene45534.t1.exon7;Parent=MS.gene45534.t1
chr2.1 CDS 6409594 6409833 6409594 ID=cds.MS.gene45534.t1;Parent=MS.gene45534.t1
Gene Sequence

>MS.gene45534

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAATGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGGTATAATATAATATTATACACTTTGTAGTTATGTAATATGTTATGTTGTTATCTGTTATATATATGGGAGGTTCATAGGCTTCTTATTGTTGTCAATTTAGAGGGTTGTCGCTTTTTGTTATCTGCTGAATAATTGATATTTCTAGTATGGTTAGTTGCTGCCAATTTCAATGATTATTTGCCTGTTTAGGATATCGGGTTGTTTTGTTATTATGTTTTGTGATTTGTTTTTTATATCCTAAAACTGCTCATTGGTTTTAGTTACTCACTTGATGGATGTTTGTATTGGATTAACAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGTATTGTACTTCTGTCAAATTAAACATCAATTTTCTACAACCACCAAGGGATTTTTTTTTTTCTGCTCGATTAATCTGATTGATTGCTTTTCAATTTTGTTCAGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGTACTCTTGAGCCAGTCTGCTGAGATTCTTCATTTTATTCTGAAAATAGTTTTTTGTTTTATCAATATTGATACTGGTATCACAAAATTTCCTTCATGTTTTCTGCTAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATGTAAGCTGTTTCAATAGCCGAAAGCTGAGTCCAGTATTCACTGGGGGCCCCGGGCTGGATGAAGTGCCACCAATATGGGTTGATCGCGGTGGTGTCAAAGCTAATATTACAGAGGCAAGTTACTTGTTTTTCTTTATTTTTACATGAACTATTTAGGCTAATGGTAGTGATTTTTTATCTTCATATTCATGTTGTGTGCCAAGCAGAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTGACTATCTCATCCGTCACTAACTGTCTTTAAAGTTGCATACATGGATGCTTTAAGCCTTTTTATTATTTGCTTACATGGATGCTTTAAGCCTTTTTATTATCTTTAAGCCTTTTTCCTCTTATAATTGTATTGGTAAACCTATCTTGTTTTATGTGACTACTCATCATAAAATTCTCATCTTTGTGATACTGAAATTACTTGTTTGTTAATTCTTTGCTGCCAATATTCAGTCTTATATATCCTTGTATATTTTCTAATTGTGTGCTAAATTTTTCCTTTTAACCTGAGTGATACTTTTCTCTAGCTGATTATACCCTAAATGTTCTTTCATTTCAATCATCCTATTTAGATCCTATGGTTAACATTTTCCTCCGTTGATGGACTATTTTTTTCTTGATTGTTGACTATGTATAATATTAAATTTTTTAACTGTAATATTCTTTTGTGTTAGCTGAGCTCTCAAGAAAACTTGTCTAGTTGTATCCTTTGGATCAATATAAAAGTTGGCATGTAAACCTATCTACAAAGATAGGAGTAGTAGAGGGAACAGGTTAAGGATATAATCTATGTAGTCTATAGTTTGCTATAGCGGCGTGTAGAGTGTTCAGTGGCTTCTATAGAAAGTAGCAGAGCCTTTTGCTGTAATGATCAAAATCGCAGCTATTCGCACCATTACGGCTGCTAAATGCTTCAGGGGGATTTTTTTACTTTTCTTGAATTTTAATATTTAGTTACTGTAAGCTTTAGACAATTAGTTTTTATTTTTTATTTTTACTTTTTTGTATTTTCTTCTATCTTTGATTTCAGACCTATTACTTTTGTTAGAATTTATGAATATTTCATGAATTTTATGTATCCTTTTCCATTATATGATGTCGGCTACTTGGATAAATCAATGCCATTGAGCTCTAACTACACATTTTCAGTGAACACTTCAATTCATGGTCCAACTTGCACTACCTTTGAGGACAAGATATCTATGTTTTCCAGGGCCGGCCTAAGGGCCAAGCAACCCAAGCAAGGGCTTTAGGCCTCAAAATTATGTGTGAAAAAAAGGCCTCTAAAAAATTAATTTGGTTATAAGTATATTATGTGATAGATAAATTACAGACATTTGCATAACATAATTGATTACTAAAAAGGCTTCAATTACTCTTGGTCATGAATTCAAATTTTGATCTCCACAAAATTGATTTTATATAAATATTTTGTTTAAAAAATATATTTTTAAAGGCCACATTAAAAATTTTGTTTTAGGCCTCTTAGTCTCTAGGGCCGGCCCTGATGTTTTCTATTTAAGACTCTTGAAGTATGCGATAGACCTGTGACAATACTTTCTGATTATACAGTTTTTATATATGCAAACTGCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGGTAGGAATTACTAGCCTCGTTTTATGATTCTTTATCAAGATTTTATTGTAGTTAACTTTTATTATCTGTTTACTAATTTCTTTTTCATTCCACAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>MS.gene45534.t1

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTNEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHVSCFNSRKLSPVFTGGPGLDEVPPIWVDRGGVKANITENFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF