Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45598.t1 | XP_013459409.1 | 95.3 | 1154 | 54 | 0 | 1 | 1154 | 1 | 1154 | 0.00E+00 | 2148.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45598.t1 | Q9SX33 | 72.9 | 1158 | 297 | 6 | 2 | 1148 | 9 | 1160 | 0.0e+00 | 1677.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45598.t1 | A0A072V5J0 | 95.3 | 1154 | 54 | 0 | 1 | 1154 | 1 | 1154 | 0.0e+00 | 2148.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052679 | MS.gene45598 | 0.801615 | 8.28E-49 | -1.69E-46 |
MS.gene052681 | MS.gene45598 | 0.822805 | 1.95E-53 | -1.69E-46 |
MS.gene052682 | MS.gene45598 | 0.800633 | 1.32E-48 | -1.69E-46 |
MS.gene054576 | MS.gene45598 | 0.835705 | 1.44E-56 | -1.69E-46 |
MS.gene058289 | MS.gene45598 | 0.833087 | 6.52E-56 | -1.69E-46 |
MS.gene059774 | MS.gene45598 | 0.820653 | 6.12E-53 | -1.69E-46 |
MS.gene060697 | MS.gene45598 | 0.817337 | 3.47E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45598.t1 | MTR_3g037330 | 97.660 | 1154 | 27 | 0 | 1 | 1154 | 1 | 1154 | 0.0 | 2338 |
MS.gene45598.t1 | MTR_3g037330 | 97.832 | 1061 | 23 | 0 | 94 | 1154 | 24 | 1084 | 0.0 | 2157 |
MS.gene45598.t1 | MTR_8g069920 | 77.133 | 1172 | 247 | 5 | 2 | 1154 | 5 | 1174 | 0.0 | 1880 |
MS.gene45598.t1 | MTR_0021s0360 | 76.970 | 1155 | 257 | 7 | 5 | 1154 | 4 | 1154 | 0.0 | 1824 |
MS.gene45598.t1 | MTR_4g112430 | 67.446 | 1155 | 365 | 5 | 2 | 1148 | 5 | 1156 | 0.0 | 1635 |
MS.gene45598.t1 | MTR_6g006910 | 62.339 | 1163 | 418 | 7 | 4 | 1149 | 7 | 1166 | 0.0 | 1516 |
MS.gene45598.t1 | MTR_2g099690 | 55.076 | 1182 | 483 | 7 | 5 | 1152 | 10 | 1177 | 0.0 | 1341 |
MS.gene45598.t1 | MTR_2g099690 | 56.531 | 911 | 346 | 8 | 5 | 880 | 10 | 905 | 0.0 | 1024 |
MS.gene45598.t1 | MTR_5g037210 | 45.357 | 1120 | 578 | 14 | 35 | 1141 | 23 | 1121 | 0.0 | 975 |
MS.gene45598.t1 | MTR_2g099690 | 54.566 | 876 | 348 | 8 | 5 | 845 | 10 | 870 | 0.0 | 949 |
MS.gene45598.t1 | MTR_8g018290 | 53.874 | 839 | 342 | 5 | 349 | 1152 | 3 | 831 | 0.0 | 937 |
MS.gene45598.t1 | MTR_8g018290 | 53.810 | 840 | 348 | 6 | 349 | 1152 | 3 | 838 | 0.0 | 935 |
MS.gene45598.t1 | MTR_7g073480 | 37.284 | 1156 | 639 | 24 | 28 | 1134 | 135 | 1253 | 0.0 | 697 |
MS.gene45598.t1 | MTR_3g007240 | 36.568 | 1113 | 647 | 16 | 31 | 1134 | 116 | 1178 | 0.0 | 664 |
MS.gene45598.t1 | MTR_8g044210 | 36.937 | 1110 | 640 | 22 | 41 | 1134 | 78 | 1143 | 0.0 | 653 |
MS.gene45598.t1 | MTR_2g090610 | 31.839 | 1093 | 638 | 28 | 45 | 1124 | 8 | 1006 | 2.12e-166 | 522 |
MS.gene45598.t1 | MTR_8g062150 | 46.486 | 555 | 278 | 8 | 36 | 584 | 44 | 585 | 1.46e-157 | 482 |
MS.gene45598.t1 | MTR_2g090610 | 32.633 | 999 | 570 | 25 | 45 | 1028 | 8 | 918 | 7.42e-156 | 489 |
MS.gene45598.t1 | MTR_3g007240 | 36.667 | 840 | 484 | 14 | 31 | 861 | 116 | 916 | 1.56e-153 | 483 |
MS.gene45598.t1 | MTR_8g027160 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 3.55e-22 | 103 |
MS.gene45598.t1 | MTR_8g027160 | 25.084 | 594 | 324 | 20 | 403 | 972 | 347 | 843 | 4.64e-22 | 103 |
MS.gene45598.t1 | MTR_2g056040 | 65.625 | 64 | 22 | 0 | 676 | 739 | 1 | 64 | 6.28e-22 | 91.7 |
MS.gene45598.t1 | MTR_2g105830 | 25.379 | 528 | 238 | 20 | 405 | 912 | 482 | 873 | 1.78e-18 | 92.0 |
MS.gene45598.t1 | MTR_4g008650 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 1.37e-13 | 76.3 |
MS.gene45598.t1 | MTR_4g008650 | 28.182 | 220 | 117 | 7 | 554 | 760 | 521 | 712 | 1.98e-13 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45598.t1 | AT1G68710 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
MS.gene45598.t1 | AT1G68710 | 73.137 | 1154 | 293 | 6 | 6 | 1148 | 13 | 1160 | 0.0 | 1774 |
MS.gene45598.t1 | AT1G68710 | 71.525 | 1180 | 293 | 7 | 6 | 1148 | 13 | 1186 | 0.0 | 1761 |
MS.gene45598.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene45598.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene45598.t1 | AT1G26130 | 71.032 | 1153 | 324 | 5 | 2 | 1148 | 9 | 1157 | 0.0 | 1723 |
MS.gene45598.t1 | AT1G26130 | 71.032 | 1153 | 323 | 6 | 2 | 1148 | 9 | 1156 | 0.0 | 1719 |
MS.gene45598.t1 | AT3G25610 | 70.645 | 1148 | 327 | 8 | 6 | 1147 | 11 | 1154 | 0.0 | 1714 |
MS.gene45598.t1 | AT1G13210 | 69.757 | 1154 | 338 | 7 | 2 | 1147 | 5 | 1155 | 0.0 | 1679 |
MS.gene45598.t1 | AT3G27870 | 63.423 | 1151 | 397 | 8 | 2 | 1138 | 5 | 1145 | 0.0 | 1554 |
MS.gene45598.t1 | AT3G27870 | 64.859 | 996 | 326 | 8 | 2 | 983 | 5 | 990 | 0.0 | 1360 |
MS.gene45598.t1 | AT3G27870 | 64.033 | 962 | 324 | 6 | 191 | 1138 | 1 | 954 | 0.0 | 1325 |
MS.gene45598.t1 | AT3G13900 | 54.206 | 1177 | 483 | 8 | 9 | 1145 | 13 | 1173 | 0.0 | 1321 |
MS.gene45598.t1 | AT1G17500 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
MS.gene45598.t1 | AT1G17500 | 54.795 | 1168 | 493 | 7 | 5 | 1152 | 9 | 1161 | 0.0 | 1319 |
MS.gene45598.t1 | AT1G72700 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
MS.gene45598.t1 | AT1G72700 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
MS.gene45598.t1 | AT1G72700 | 53.774 | 1179 | 500 | 8 | 5 | 1152 | 9 | 1173 | 0.0 | 1309 |
MS.gene45598.t1 | AT1G54280 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
MS.gene45598.t1 | AT1G54280 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
MS.gene45598.t1 | AT1G54280 | 53.486 | 1176 | 495 | 6 | 9 | 1145 | 13 | 1175 | 0.0 | 1303 |
MS.gene45598.t1 | AT3G13900 | 56.080 | 954 | 361 | 9 | 9 | 920 | 13 | 950 | 0.0 | 1078 |
MS.gene45598.t1 | AT3G13900 | 55.459 | 916 | 352 | 8 | 9 | 884 | 13 | 912 | 0.0 | 1018 |
MS.gene45598.t1 | AT1G59820 | 45.013 | 1113 | 585 | 14 | 36 | 1141 | 36 | 1128 | 0.0 | 959 |
MS.gene45598.t1 | AT5G04930 | 36.592 | 1115 | 615 | 25 | 35 | 1124 | 67 | 1114 | 0.0 | 648 |
MS.gene45598.t1 | AT5G44240 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 18 | 1006 | 9.07e-166 | 520 |
MS.gene45598.t1 | AT5G44240 | 32.472 | 1084 | 623 | 30 | 55 | 1124 | 50 | 1038 | 4.82e-165 | 520 |
MS.gene45598.t1 | AT4G00900 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.83e-22 | 102 |
MS.gene45598.t1 | AT4G00900 | 24.831 | 592 | 325 | 18 | 403 | 972 | 346 | 839 | 8.83e-22 | 102 |
MS.gene45598.t1 | AT1G07670 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
MS.gene45598.t1 | AT1G07670 | 25.386 | 583 | 310 | 23 | 403 | 966 | 361 | 837 | 1.02e-18 | 92.8 |
MS.gene45598.t1 | AT3G18700 | 54.667 | 75 | 29 | 3 | 936 | 1007 | 5 | 77 | 2.41e-13 | 70.1 |
MS.gene45598.t1 | AT1G07810 | 26.629 | 353 | 192 | 14 | 403 | 736 | 361 | 665 | 5.68e-11 | 67.8 |
Find 226 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTAATGCTTGAATTTC+AGG | 0.092546 | 3.1:-27015342 | None:intergenic |
TTCAAACTCCCTTCCATTAA+TGG | 0.130822 | 3.1:-27014749 | None:intergenic |
AAGATTATCTACTTCTTATT+TGG | 0.153322 | 3.1:+27013526 | MS.gene45598:CDS |
ATGGAGTTGGATCCGGTTTC+TGG | 0.155446 | 3.1:+27014309 | MS.gene45598:CDS |
CGCTTCCTGCCATTGCCCTT+GGG | 0.198332 | 3.1:+27016878 | MS.gene45598:CDS |
TTTGGGGTTCTATTGCTATT+TGG | 0.221327 | 3.1:+27017982 | MS.gene45598:CDS |
TATTTATTCGTGTTTGCTTA+TGG | 0.221522 | 3.1:+27018005 | MS.gene45598:CDS |
GGTACAACATGTTGCCATTT+GGG | 0.235702 | 3.1:+27017965 | MS.gene45598:CDS |
CAGAAAGGATTGTGTCAATT+TGG | 0.237613 | 3.1:-27013879 | None:intergenic |
TTTATTGGATCTATTCTCTT+TGG | 0.253050 | 3.1:+27013568 | MS.gene45598:CDS |
TTGCTCCATCGGCTTCCTTT+TGG | 0.253515 | 3.1:+27018081 | MS.gene45598:CDS |
TTTGAAAGGCTTGCCATTAA+TGG | 0.262915 | 3.1:+27014736 | MS.gene45598:CDS |
CACAAGCTAGAATTAAGATA+TGG | 0.263078 | 3.1:+27015124 | MS.gene45598:CDS |
TTGGAAGACAAGGGTATTCT+AGG | 0.272681 | 3.1:+27011704 | MS.gene45598:CDS |
TTCATCAAATGTTCGGTTGC+TGG | 0.279773 | 3.1:+27013937 | MS.gene45598:CDS |
TACATGGACATTGGTGTTAC+AGG | 0.280817 | 3.1:+27016358 | MS.gene45598:CDS |
AGTCATTGTTTGAGCAGTTT+AGG | 0.281595 | 3.1:+27011833 | MS.gene45598:CDS |
GAATTCGGCGCCACCTAAAT+AGG | 0.284721 | 3.1:-27017752 | None:intergenic |
AACTGGAATCAATTGATATC+AGG | 0.289431 | 3.1:+27014016 | MS.gene45598:CDS |
AATTGCACAATTCCGGTATC+TGG | 0.297086 | 3.1:+27016320 | MS.gene45598:CDS |
TTCGGAGCAGTCATCTTTAC+TGG | 0.309047 | 3.1:+27013430 | MS.gene45598:CDS |
CCATGTATACTTGTGTCGTT+TGG | 0.311621 | 3.1:+27017898 | MS.gene45598:CDS |
TCGCTTCCTGCCATTGCCCT+TGG | 0.312300 | 3.1:+27016877 | MS.gene45598:CDS |
AATTTCTATTTCCTTGTTGC+TGG | 0.314481 | 3.1:+27011865 | MS.gene45598:CDS |
GATTAATGAATATGCTTTGA+AGG | 0.316781 | 3.1:-27013780 | None:intergenic |
AAAGAATAATGAACGGAAAC+TGG | 0.319383 | 3.1:+27014088 | MS.gene45598:CDS |
GGACATTCTGTACACCTTCT+TGG | 0.324279 | 3.1:-27017731 | None:intergenic |
GCAGAAGAAGAAAATTATTA+TGG | 0.331068 | 3.1:-27017805 | None:intergenic |
GGTACAATGGATGAGGTATA+AGG | 0.331412 | 3.1:+27018196 | MS.gene45598:CDS |
GTAGAAGACAAGCTCCAAAA+TGG | 0.334486 | 3.1:+27014982 | MS.gene45598:CDS |
CTTGTATTTCTCAATAGAAT+TGG | 0.336216 | 3.1:+27013750 | MS.gene45598:CDS |
CCTGTTTCCTCGTCCACTTC+CGG | 0.343161 | 3.1:-27014180 | None:intergenic |
CGTAATACAGACTTCATATT+CGG | 0.344767 | 3.1:+27013412 | MS.gene45598:CDS |
AAAGAGTACAAATTTGCATT+TGG | 0.346977 | 3.1:-27013313 | None:intergenic |
TTTGAAGCTAAAACAAGGTT+TGG | 0.350750 | 3.1:+27013222 | MS.gene45598:CDS |
GTGTACAGAATGTCCTATTT+AGG | 0.351914 | 3.1:+27017739 | MS.gene45598:CDS |
GAAGAAGTTGTATAGCATTA+AGG | 0.356254 | 3.1:-27013716 | None:intergenic |
ACAATCCTTTCTGATAAAAC+TGG | 0.357068 | 3.1:+27013889 | MS.gene45598:CDS |
CGTTCTCGTCAAAGGCTTGA+AGG | 0.358215 | 3.1:-27017842 | None:intergenic |
TCGGTTGCTGGGGTAGCTTA+TGG | 0.358460 | 3.1:+27013949 | MS.gene45598:CDS |
CAACAAGATAGATTTGAATC+AGG | 0.359396 | 3.1:+27011745 | MS.gene45598:CDS |
GAATGCTCTCTCTTAAACTT+TGG | 0.359897 | 3.1:-27011676 | None:intergenic |
CTTCCTTTAGCTGTTATAGT+TGG | 0.363690 | 3.1:+27011937 | MS.gene45598:CDS |
GCAGACTGCATCTTCGTAAC+TGG | 0.363861 | 3.1:-27013164 | None:intergenic |
TGACAGCAGCTTTGAAATCA+TGG | 0.368958 | 3.1:-27013279 | None:intergenic |
TGGTACAACATGTTGCCATT+TGG | 0.369553 | 3.1:+27017964 | MS.gene45598:CDS |
ATATTGCAATTGCACAATTC+CGG | 0.375437 | 3.1:+27016313 | MS.gene45598:CDS |
ATAGCACTAACAGCAGTATA+AGG | 0.380016 | 3.1:-27011913 | None:intergenic |
TTCTAAGTTGGATGCTCAAC+GGG | 0.380465 | 3.1:+27017772 | MS.gene45598:CDS |
TTCTACAAGAATATTACATT+TGG | 0.389391 | 3.1:+27016760 | MS.gene45598:CDS |
TTCTTCTGCACTAAAGCAAT+AGG | 0.389424 | 3.1:+27017819 | MS.gene45598:CDS |
CGCTGAGACTCTTGCTCCAT+CGG | 0.392380 | 3.1:+27018070 | MS.gene45598:CDS |
ATAAAATTAAAACCTTTGAT+TGG | 0.392819 | 3.1:-27014060 | None:intergenic |
TGAGCATCCAACTTAGAATT+CGG | 0.402885 | 3.1:-27017767 | None:intergenic |
CATACCAGAGCCTTCTGCTT+TGG | 0.404281 | 3.1:-27015734 | None:intergenic |
TTCATTCAAGTTTGAAGTAC+GGG | 0.405582 | 3.1:-27013848 | None:intergenic |
ATCACAAATGCTGCTTCATC+AGG | 0.408000 | 3.1:-27014228 | None:intergenic |
AACTTTGACTTGCAACTCAA+TGG | 0.412940 | 3.1:+27013912 | MS.gene45598:CDS |
TCAACCTCATTGCCAGAAAC+CGG | 0.415131 | 3.1:-27014321 | None:intergenic |
CCGGAAGTGGACGAGGAAAC+AGG | 0.415407 | 3.1:+27014180 | MS.gene45598:CDS |
TATGACAAACAGACAATAAA+CGG | 0.417642 | 3.1:-27014149 | None:intergenic |
AAAGAGAATAGATCCAATAA+AGG | 0.418393 | 3.1:-27013566 | None:intergenic |
TCATCAAATGTTCGGTTGCT+GGG | 0.418614 | 3.1:+27013938 | MS.gene45598:CDS |
AATATTATACCCAATGTTGA+TGG | 0.420341 | 3.1:-27015175 | None:intergenic |
AAGAAAATGGTGGAATCATC+TGG | 0.425560 | 3.1:-27013646 | None:intergenic |
ATCAATGATGGAGTTGGATC+CGG | 0.426178 | 3.1:+27014302 | MS.gene45598:CDS |
TTTCACTCTATTCTTATATG+AGG | 0.431318 | 3.1:+27016783 | MS.gene45598:CDS |
ACAAGCTAGAATTAAGATAT+GGG | 0.433537 | 3.1:+27015125 | MS.gene45598:CDS |
AAACTGCTTTCTGCATCTAA+AGG | 0.437114 | 3.1:+27015581 | MS.gene45598:CDS |
CTCATAAAAGGTTACTAGAT+TGG | 0.437606 | 3.1:+27016050 | MS.gene45598:intron |
TAGAAGACAAGCTCCAAAAT+GGG | 0.438213 | 3.1:+27014983 | MS.gene45598:CDS |
AGAAGAGTTATATGTCATAA+AGG | 0.439780 | 3.1:+27013037 | MS.gene45598:CDS |
AAGAGAGAGCATTCACAGAT+TGG | 0.439786 | 3.1:+27011685 | MS.gene45598:CDS |
ATTATGCTGATAATTCTGTT+AGG | 0.442793 | 3.1:+27011776 | MS.gene45598:CDS |
CATTGGTAGTAGGTCGGAAC+TGG | 0.447064 | 3.1:+27013999 | MS.gene45598:CDS |
CATGTATACTTGTGTCGTTT+GGG | 0.447842 | 3.1:+27017899 | MS.gene45598:CDS |
AACTGCTTTCTGCATCTAAA+GGG | 0.455917 | 3.1:+27015582 | MS.gene45598:CDS |
CATGCAGTGTCATGTTTGAA+AGG | 0.455976 | 3.1:+27014722 | MS.gene45598:intron |
TAATATGTACTATGAAGAAC+TGG | 0.459205 | 3.1:+27013810 | MS.gene45598:CDS |
AATGGAGTTCATCAAATGTT+CGG | 0.463379 | 3.1:+27013930 | MS.gene45598:CDS |
CTCTCCTCCCTAGGCCGTCA+TGG | 0.464414 | 3.1:+27016284 | MS.gene45598:intron |
GCAGTTGTTGAAAAGCTTGA+AGG | 0.465063 | 3.1:-27018035 | None:intergenic |
TGTTATAGTTGGTGCAACTA+TGG | 0.466414 | 3.1:+27011948 | MS.gene45598:CDS |
AGAAGCTGCTGAGGAGAAAG+TGG | 0.468812 | 3.1:-27013370 | None:intergenic |
TCAGAACAGTTTATCAATGA+TGG | 0.468858 | 3.1:+27014290 | MS.gene45598:CDS |
GAGAGGAATCTAATCCTTCT+CGG | 0.469754 | 3.1:+27014949 | MS.gene45598:CDS |
ACACCTTCTTGGTACAAGAT+AGG | 0.470513 | 3.1:-27017720 | None:intergenic |
AGTAACTTCTTCATTAAATG+AGG | 0.471404 | 3.1:+27013246 | MS.gene45598:CDS |
ATTAGTTCTGCAGGATATTG+AGG | 0.471702 | 3.1:+27013006 | MS.gene45598:intron |
GAAAGCAGTAATAGGTCGGC+AGG | 0.473145 | 3.1:-27013139 | None:intergenic |
GAGGTGTATGCATCATTCTC+TGG | 0.475622 | 3.1:+27016802 | MS.gene45598:CDS |
AACTGGACGAAAGCAGTAAT+AGG | 0.476044 | 3.1:-27013147 | None:intergenic |
TCATACTGCCATGCCGGAAG+TGG | 0.477207 | 3.1:+27014167 | MS.gene45598:CDS |
CTTCATTCAAGTTTGAAGTA+CGG | 0.477834 | 3.1:-27013849 | None:intergenic |
CTACGTTGAAACGATGAACT+TGG | 0.481235 | 3.1:+27013186 | MS.gene45598:CDS |
TGCTCTGTAAAGGCGCTGAC+AGG | 0.482856 | 3.1:+27014613 | MS.gene45598:CDS |
GTACAATGGATGAGGTATAA+GGG | 0.483970 | 3.1:+27018197 | MS.gene45598:CDS |
GAAGTAATCTTTCCAGATAC+CGG | 0.489297 | 3.1:-27016332 | None:intergenic |
TGGAGACTGCCATCAACATT+GGG | 0.499022 | 3.1:+27015166 | MS.gene45598:CDS |
ATGGAGACTGCCATCAACAT+TGG | 0.501775 | 3.1:+27015165 | MS.gene45598:CDS |
TGTTTCCTATGCATCATGAA+AGG | 0.506304 | 3.1:+27018174 | MS.gene45598:CDS |
TGCCATGCCGGAAGTGGACG+AGG | 0.510510 | 3.1:+27014173 | MS.gene45598:CDS |
ATCGCCAAAGCAGAAGGCTC+TGG | 0.513485 | 3.1:+27015730 | MS.gene45598:CDS |
GGTGGCGCCGAATTCTAAGT+TGG | 0.514230 | 3.1:+27017760 | MS.gene45598:CDS |
TTCCTCGTCCACTTCCGGCA+TGG | 0.515006 | 3.1:-27014175 | None:intergenic |
GAGCTTGTCTTCTACAGCAG+TGG | 0.515492 | 3.1:-27014974 | None:intergenic |
CTATGAAGAACTGGACAAAC+CGG | 0.515910 | 3.1:+27013819 | MS.gene45598:CDS |
GCTTCCTGCCATTGCCCTTG+GGG | 0.517141 | 3.1:+27016879 | MS.gene45598:CDS |
GTTTCCTATGCATCATGAAA+GGG | 0.517453 | 3.1:+27018175 | MS.gene45598:CDS |
CATTGTTTGAGCAGTTTAGG+AGG | 0.518268 | 3.1:+27011836 | MS.gene45598:CDS |
GTTACTAGATTGGTCAAAGA+AGG | 0.518896 | 3.1:+27016060 | MS.gene45598:CDS |
TATTGAGAAATACAAGGAGA+TGG | 0.520310 | 3.1:-27013743 | None:intergenic |
GCACCAACTATAACAGCTAA+AGG | 0.520410 | 3.1:-27011940 | None:intergenic |
GCTGGGGTAGCTTATGGCCG+TGG | 0.520696 | 3.1:+27013955 | MS.gene45598:CDS |
CAGTTTATCAATGATGGAGT+TGG | 0.523883 | 3.1:+27014296 | MS.gene45598:CDS |
GAGCAAAATCGAGATGAAGA+TGG | 0.524645 | 3.1:+27013501 | MS.gene45598:CDS |
CAAGAAGCTGATGTAGGTGT+TGG | 0.531998 | 3.1:+27016138 | MS.gene45598:CDS |
TGCAATATCACTAGCCATGA+CGG | 0.534715 | 3.1:-27016298 | None:intergenic |
TCTCGGAGAAGAAGCTGCTG+AGG | 0.535606 | 3.1:-27013379 | None:intergenic |
ACAACATTAGCCATCGGTGA+TGG | 0.535671 | 3.1:+27016093 | MS.gene45598:CDS |
GTCACTTGTTTATGCTCTAG+AGG | 0.536426 | 3.1:+27015643 | MS.gene45598:CDS |
GAAGGATGGAGGAGACAAGA+TGG | 0.538054 | 3.1:+27015362 | MS.gene45598:CDS |
CCAAACGACACAAGTATACA+TGG | 0.538726 | 3.1:-27017898 | None:intergenic |
CAGTGGTGTTGAAGGAATGC+AGG | 0.539214 | 3.1:+27016164 | MS.gene45598:CDS |
AGTACCTAGCAGATACATCT+TGG | 0.539728 | 3.1:-27016909 | None:intergenic |
TTTCCTATCTTGTACCAAGA+AGG | 0.539909 | 3.1:+27017717 | MS.gene45598:CDS |
ACAACGGAATTATGAAAAGA+TGG | 0.539970 | 3.1:+27013614 | MS.gene45598:CDS |
TTTGAAGTACGGGCAAGAGC+CGG | 0.543120 | 3.1:-27013838 | None:intergenic |
CTTCAAGCCTTTGACGAGAA+CGG | 0.543588 | 3.1:+27017843 | MS.gene45598:CDS |
GTCAAAGACCCCAAGGGCAA+TGG | 0.544360 | 3.1:-27016887 | None:intergenic |
AATAGCAATAGAACCCCAAA+TGG | 0.546308 | 3.1:-27017979 | None:intergenic |
AAAGGCTTGCCATTAATGGA+AGG | 0.548014 | 3.1:+27014740 | MS.gene45598:CDS |
TGTACCCTTTCATGATGCAT+AGG | 0.548249 | 3.1:-27018179 | None:intergenic |
TTTGAATGATCTTACCATTG+TGG | 0.549643 | 3.1:-27016388 | None:intergenic |
AATCAATGATTCATGATCCA+TGG | 0.550551 | 3.1:-27014905 | None:intergenic |
GTACAACATGTTGCCATTTG+GGG | 0.550990 | 3.1:+27017966 | MS.gene45598:CDS |
GTTATATGTCATAAAGGTGG+TGG | 0.551348 | 3.1:+27013043 | MS.gene45598:CDS |
GTTGGAATCAGTGGTGTTGA+AGG | 0.551752 | 3.1:+27016156 | MS.gene45598:CDS |
TACTTCTTGTACATGGACAT+TGG | 0.552282 | 3.1:+27016349 | MS.gene45598:CDS |
TTCTTCATCAAGTTCACGAT+AGG | 0.552409 | 3.1:-27014833 | None:intergenic |
GGATCATGAATCATTGATTG+AGG | 0.552625 | 3.1:+27014909 | MS.gene45598:CDS |
ACAGAGGTTGAGCAAGCCAT+TGG | 0.552734 | 3.1:+27013982 | MS.gene45598:CDS |
AAATAATGTGAGAATCCAAA+AGG | 0.553021 | 3.1:-27018096 | None:intergenic |
TTTCTGGCAATGAGGTTGAA+AGG | 0.557011 | 3.1:+27014325 | MS.gene45598:CDS |
TGGAAGACAAGGGTATTCTA+GGG | 0.557902 | 3.1:+27011705 | MS.gene45598:CDS |
AACTGCTCAAACAATGACTT+AGG | 0.558931 | 3.1:-27011829 | None:intergenic |
ACTGGAATCAATTGATATCA+GGG | 0.559607 | 3.1:+27014017 | MS.gene45598:CDS |
GAAAGATTACTTCTTGTACA+TGG | 0.560318 | 3.1:+27016342 | MS.gene45598:CDS |
TTTAGGATCAAAGAAAATGG+TGG | 0.560736 | 3.1:-27013656 | None:intergenic |
GACAGCCTGCATACAATGAC+TGG | 0.560825 | 3.1:+27016824 | MS.gene45598:CDS |
TCGCTCATCGCCAAAGCAGA+AGG | 0.562440 | 3.1:+27015724 | MS.gene45598:CDS |
TCTTGTCGCTTGCTTCGACA+AGG | 0.562978 | 3.1:+27015288 | MS.gene45598:CDS |
ATCGTGGAGCACGAAAAGTA+TGG | 0.564066 | 3.1:-27018140 | None:intergenic |
ATTGAGAAATACAAGGAGAT+GGG | 0.564117 | 3.1:-27013742 | None:intergenic |
AAGACCCCAAGGGCAATGGC+AGG | 0.565148 | 3.1:-27016883 | None:intergenic |
AAATATAGTGAAGATAAAGA+AGG | 0.572990 | 3.1:+27013105 | MS.gene45598:CDS |
CAGTTCCGACCTACTACCAA+TGG | 0.573787 | 3.1:-27013998 | None:intergenic |
AGATTGGTCAAAGAAGGAAC+TGG | 0.574066 | 3.1:+27016066 | MS.gene45598:CDS |
ATTCTAAGTTGGATGCTCAA+CGG | 0.574175 | 3.1:+27017771 | MS.gene45598:CDS |
CATTCACAGATTGGAAGACA+AGG | 0.574518 | 3.1:+27011694 | MS.gene45598:CDS |
GTGATAGTTAAAGATGAAGA+CGG | 0.574581 | 3.1:+27014579 | MS.gene45598:CDS |
TTGAGCAAGCCATTGGTAGT+AGG | 0.576117 | 3.1:+27013989 | MS.gene45598:CDS |
ATGAAAGGGTACAATGGATG+AGG | 0.576394 | 3.1:+27018189 | MS.gene45598:CDS |
CAATTCTATTGAGAAATACA+AGG | 0.576444 | 3.1:-27013749 | None:intergenic |
CTACAGCAGTGGCACCGAGA+AGG | 0.578850 | 3.1:-27014963 | None:intergenic |
AAATATCAGAAAAGATTGAG+AGG | 0.579299 | 3.1:+27014932 | MS.gene45598:CDS |
TGATAGTTAAAGATGAAGAC+GGG | 0.581808 | 3.1:+27014580 | MS.gene45598:CDS |
ATTCAAGCATTAGAGAAGGA+TGG | 0.585019 | 3.1:+27015348 | MS.gene45598:CDS |
GCATTTGCTCTGATAATCGA+TGG | 0.585989 | 3.1:+27015617 | MS.gene45598:CDS |
GTGTATCTTCAGATATCTGA+AGG | 0.586350 | 3.1:+27015554 | MS.gene45598:CDS |
CGTGCTCCACGATTAAAATG+TGG | 0.587780 | 3.1:+27018150 | MS.gene45598:CDS |
ATGCTTCAAGAAGCTGATGT+AGG | 0.588681 | 3.1:+27016132 | MS.gene45598:CDS |
ACCGCTGGAAAAGACATACT+AGG | 0.589669 | 3.1:+27017870 | MS.gene45598:CDS |
GTGATTGCTGCAAGAGAAGT+GGG | 0.590048 | 3.1:+27014246 | MS.gene45598:CDS |
ACTAAACGTGACTTGAACAA+CGG | 0.595592 | 3.1:+27013598 | MS.gene45598:CDS |
TTGGGTTGTAAACCTACAGA+TGG | 0.595777 | 3.1:+27017917 | MS.gene45598:CDS |
GATCGAAAAGAACCAATCAA+AGG | 0.596365 | 3.1:+27014048 | MS.gene45598:CDS |
GTGAGTGAATATGCTGATGC+AGG | 0.598689 | 3.1:+27014790 | MS.gene45598:CDS |
AGTTGGTGCAACTATGGTGA+AGG | 0.600945 | 3.1:+27011954 | MS.gene45598:CDS |
TGAAATTCAAGCATTAGAGA+AGG | 0.601663 | 3.1:+27015344 | MS.gene45598:CDS |
ATTGTTTGAGCAGTTTAGGA+GGG | 0.602269 | 3.1:+27011837 | MS.gene45598:CDS |
CATCAAATGTTCGGTTGCTG+GGG | 0.604157 | 3.1:+27013939 | MS.gene45598:CDS |
ATCTGCTAGGTACTGCGTCA+AGG | 0.606063 | 3.1:+27016918 | MS.gene45598:CDS |
ATAGATGAAAGAATAATGAA+CGG | 0.608033 | 3.1:+27014081 | MS.gene45598:CDS |
AGAATCCAAAAGGAAGCCGA+TGG | 0.608817 | 3.1:-27018086 | None:intergenic |
AAGGCTTGCCATTAATGGAA+GGG | 0.610755 | 3.1:+27014741 | MS.gene45598:CDS |
GCACAGCGAGCGCCATCTGT+AGG | 0.610848 | 3.1:-27017929 | None:intergenic |
GTCATTAGCTCCATCACCGA+TGG | 0.611715 | 3.1:-27016103 | None:intergenic |
TTGACCAAGATGTATCTGCT+AGG | 0.614128 | 3.1:+27016905 | MS.gene45598:CDS |
TGCATCATGAAAGGGTACAA+TGG | 0.615628 | 3.1:+27018183 | MS.gene45598:CDS |
AGAGTTATATGTCATAAAGG+TGG | 0.616344 | 3.1:+27013040 | MS.gene45598:CDS |
TGTGATTGCTGCAAGAGAAG+TGG | 0.617623 | 3.1:+27014245 | MS.gene45598:CDS |
CGGTGATGGAGCTAATGACG+TGG | 0.621362 | 3.1:+27016107 | MS.gene45598:CDS |
GAGTGGAAGAATCTCAAGGT+AGG | 0.622591 | 3.1:+27013082 | MS.gene45598:CDS |
ACAAATTTGAAGCTAAAACA+AGG | 0.623681 | 3.1:+27013217 | MS.gene45598:CDS |
TACAGAATGTCCTATTTAGG+TGG | 0.628770 | 3.1:+27017742 | MS.gene45598:CDS |
AGACAAGATGGCTATCATGA+AGG | 0.630297 | 3.1:+27015374 | MS.gene45598:CDS |
GGACGAAAGCAGTAATAGGT+CGG | 0.635029 | 3.1:-27013143 | None:intergenic |
TGTTTGTCATACTGCCATGC+CGG | 0.635666 | 3.1:+27014161 | MS.gene45598:CDS |
GATTCTCACATTATTTGTCG+CGG | 0.636103 | 3.1:+27018103 | MS.gene45598:CDS |
CGCTGTGCGATACTTCACCT+TGG | 0.640777 | 3.1:+27017944 | MS.gene45598:CDS |
GATGTAGGTGTTGGAATCAG+TGG | 0.648525 | 3.1:+27016147 | MS.gene45598:CDS |
GCAAGCCATTGGTAGTAGGT+CGG | 0.650019 | 3.1:+27013993 | MS.gene45598:CDS |
AAGCTAAGATACCAGCAACA+AGG | 0.652050 | 3.1:-27011876 | None:intergenic |
TACGGAGTGGAAGAATCTCA+AGG | 0.656618 | 3.1:+27013078 | MS.gene45598:CDS |
AGCGAAAATTACAGTCACCA+TGG | 0.656927 | 3.1:+27014888 | MS.gene45598:CDS |
CATCTTGGTCAAAGACCCCA+AGG | 0.658958 | 3.1:-27016894 | None:intergenic |
CAAGCATTAGAGAAGGATGG+AGG | 0.659207 | 3.1:+27015351 | MS.gene45598:CDS |
TCAAACTTGAATGAAGAACT+CGG | 0.661344 | 3.1:+27013856 | MS.gene45598:CDS |
GGATCCGGTTTCTGGCAATG+AGG | 0.662297 | 3.1:+27014317 | MS.gene45598:CDS |
GTTGAAACGATGAACTTGGA+TGG | 0.664384 | 3.1:+27013190 | MS.gene45598:CDS |
GGTAAAACAACATTAGCCAT+CGG | 0.664569 | 3.1:+27016087 | MS.gene45598:CDS |
CAGAGCAAATGCTTGCTGAG+AGG | 0.665647 | 3.1:-27015606 | None:intergenic |
AGAAGACAAGCTCCAAAATG+GGG | 0.671624 | 3.1:+27014984 | MS.gene45598:CDS |
CTTTACTGGTCACGACACGA+AGG | 0.680986 | 3.1:+27013444 | MS.gene45598:CDS |
ATGGACATTGGTGTTACAGG+AGG | 0.686829 | 3.1:+27016361 | MS.gene45598:CDS |
AAAGCAGTAATAGGTCGGCA+GGG | 0.688009 | 3.1:-27013138 | None:intergenic |
GGTGATGGAGCTAATGACGT+GGG | 0.688269 | 3.1:+27016108 | MS.gene45598:CDS |
GGTGCAACTATGGTGAAGGA+AGG | 0.698242 | 3.1:+27011958 | MS.gene45598:CDS |
AATGGCAACATGTTGTACCA+AGG | 0.698501 | 3.1:-27017961 | None:intergenic |
TTCTGTATAACATCTGCACG+AGG | 0.698773 | 3.1:-27014120 | None:intergenic |
GCTCAACCTCTGTGACACCA+CGG | 0.705887 | 3.1:-27013972 | None:intergenic |
ATTCACAGATTGGAAGACAA+GGG | 0.715792 | 3.1:+27011695 | MS.gene45598:CDS |
TTACAGGAGGATGTCCACAA+TGG | 0.740764 | 3.1:+27016374 | MS.gene45598:CDS |
ATCTTGGTCAAAGACCCCAA+GGG | 0.742412 | 3.1:-27016893 | None:intergenic |
TTATGGCCGTGGTGTCACAG+AGG | 0.763255 | 3.1:+27013966 | MS.gene45598:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAAACAAAAATATCA+TGG | - | chr3.1:27017693-27017712 | None:intergenic | 10.0% |
!! | AATTAAAATAGTTTAAATGA+AGG | - | chr3.1:27015852-27015871 | None:intergenic | 10.0% |
!! | ATTGAGTAAAAAATAAAAAT+TGG | - | chr3.1:27015876-27015895 | None:intergenic | 10.0% |
!!! | AAACAAAACATTTTATAAAA+CGG | - | chr3.1:27016256-27016275 | None:intergenic | 10.0% |
!!! | GATTTTTTTCAAATTATTAA+TGG | + | chr3.1:27012505-27012524 | MS.gene45598:intron | 10.0% |
!!! | TAATATTTTGTTTATTCTTT+TGG | + | chr3.1:27016722-27016741 | MS.gene45598:intron | 10.0% |
!! | AACAAAAATAAGGAAAAATA+AGG | - | chr3.1:27015802-27015821 | None:intergenic | 15.0% |
!! | AATAAAATGAAAACAACTTA+TGG | - | chr3.1:27016533-27016552 | None:intergenic | 15.0% |
!! | AGCAAAAAAAAAATATAGTT+AGG | - | chr3.1:27015077-27015096 | None:intergenic | 15.0% |
!! | ATAAAATTAAAACCTTTGAT+TGG | - | chr3.1:27014063-27014082 | None:intergenic | 15.0% |
!! | TAAACTATAAATGATATAAC+TGG | + | chr3.1:27015939-27015958 | MS.gene45598:intron | 15.0% |
!! | TTTATTCATGTTAAATAATG+CGG | + | chr3.1:27014463-27014482 | MS.gene45598:intron | 15.0% |
!!! | AACTATATTTTTTTTTTGCT+AGG | + | chr3.1:27015077-27015096 | MS.gene45598:intron | 15.0% |
!!! | ATAAAATAAATTTTGATGCA+TGG | - | chr3.1:27014448-27014467 | None:intergenic | 15.0% |
!!! | ATTATGAAGAAAACTTTTTA+GGG | + | chr3.1:27017412-27017431 | MS.gene45598:intron | 15.0% |
!!! | GCTTTTTGAATAAATTTTAT+TGG | + | chr3.1:27016022-27016041 | MS.gene45598:intron | 15.0% |
!!! | TATTATGAAGAAAACTTTTT+AGG | + | chr3.1:27017411-27017430 | MS.gene45598:intron | 15.0% |
!!! | TTATTTTTCCTTATTTTTGT+TGG | + | chr3.1:27015801-27015820 | MS.gene45598:intron | 15.0% |
!! | AAAGTCACAAATTTCATTTA+AGG | - | chr3.1:27016597-27016616 | None:intergenic | 20.0% |
!! | AAATATAGTGAAGATAAAGA+AGG | + | chr3.1:27013105-27013124 | MS.gene45598:CDS | 20.0% |
!! | AAGATTATCTACTTCTTATT+TGG | + | chr3.1:27013526-27013545 | MS.gene45598:CDS | 20.0% |
!! | ATACAAGAGTCATAAATATA+AGG | + | chr3.1:27012822-27012841 | MS.gene45598:intron | 20.0% |
!! | ATAGATGAAAGAATAATGAA+CGG | + | chr3.1:27014081-27014100 | MS.gene45598:CDS | 20.0% |
!! | ATCTCAACATTCAATATATT+TGG | + | chr3.1:27016415-27016434 | MS.gene45598:intron | 20.0% |
!! | GAAGATTAATATTTATCAGT+TGG | + | chr3.1:27015032-27015051 | MS.gene45598:intron | 20.0% |
!! | GTAAATAGAGTAATTACATT+CGG | - | chr3.1:27012891-27012910 | None:intergenic | 20.0% |
!! | TAAATATGTTTATCCAATCA+AGG | + | chr3.1:27016679-27016698 | MS.gene45598:intron | 20.0% |
!! | TCTCAACATTCAATATATTT+GGG | + | chr3.1:27016416-27016435 | MS.gene45598:intron | 20.0% |
!! | TTAGAGAAAATGTAAATGTT+TGG | - | chr3.1:27017574-27017593 | None:intergenic | 20.0% |
!! | TTCTACAAGAATATTACATT+TGG | + | chr3.1:27016760-27016779 | MS.gene45598:CDS | 20.0% |
!!! | AAATTTTTACTTGTGCTATT+TGG | - | chr3.1:27015484-27015503 | None:intergenic | 20.0% |
!!! | AGTAACTAATTTCATTTTGT+AGG | + | chr3.1:27014502-27014521 | MS.gene45598:intron | 20.0% |
!!! | CATGAAGGTAAATAAATTTT+AGG | + | chr3.1:27015389-27015408 | MS.gene45598:intron | 20.0% |
!!! | TATGCATTTTCATTTTACAA+TGG | + | chr3.1:27015208-27015227 | MS.gene45598:intron | 20.0% |
!!! | TTATTTTTCCAAATTCTTAC+CGG | - | chr3.1:27017035-27017054 | None:intergenic | 20.0% |
!!! | TTGTTTTTAATTGCCTTTAT+TGG | + | chr3.1:27013553-27013572 | MS.gene45598:CDS | 20.0% |
!!! | TTTTAGAATTCAATAGTTCA+AGG | + | chr3.1:27014544-27014563 | MS.gene45598:CDS | 20.0% |
! | AAAGAGAATAGATCCAATAA+AGG | - | chr3.1:27013569-27013588 | None:intergenic | 25.0% |
! | AAATAATGTGAGAATCCAAA+AGG | - | chr3.1:27018099-27018118 | None:intergenic | 25.0% |
! | AAATATCAGAAAAGATTGAG+AGG | + | chr3.1:27014932-27014951 | MS.gene45598:CDS | 25.0% |
! | AAATGATATAACTGGCAAAA+CGG | + | chr3.1:27015947-27015966 | MS.gene45598:intron | 25.0% |
! | AACAAATGCTCAAATTTGTA+AGG | - | chr3.1:27012172-27012191 | None:intergenic | 25.0% |
! | AATATTATACCCAATGTTGA+TGG | - | chr3.1:27015178-27015197 | None:intergenic | 25.0% |
! | ACAAGCTAGAATTAAGATAT+GGG | + | chr3.1:27015125-27015144 | MS.gene45598:CDS | 25.0% |
! | ACTTATTTGAATTTATCTGC+TGG | + | chr3.1:27016452-27016471 | MS.gene45598:intron | 25.0% |
! | AGAAAATGTAAATGTTTGGT+AGG | - | chr3.1:27017570-27017589 | None:intergenic | 25.0% |
! | AGAAGAGTTATATGTCATAA+AGG | + | chr3.1:27013037-27013056 | MS.gene45598:CDS | 25.0% |
! | AGTAACTTCTTCATTAAATG+AGG | + | chr3.1:27013246-27013265 | MS.gene45598:CDS | 25.0% |
! | ATACAATCAGAATATTCACA+TGG | - | chr3.1:27012347-27012366 | None:intergenic | 25.0% |
! | ATAGATGACAACATATTAGA+TGG | - | chr3.1:27016961-27016980 | None:intergenic | 25.0% |
! | ATTATGCTGATAATTCTGTT+AGG | + | chr3.1:27011776-27011795 | MS.gene45598:CDS | 25.0% |
! | CAATTCTATTGAGAAATACA+AGG | - | chr3.1:27013752-27013771 | None:intergenic | 25.0% |
! | CTACAAGCAATAACTAAATT+AGG | - | chr3.1:27014422-27014441 | None:intergenic | 25.0% |
! | CTTATTTGAATTTATCTGCT+GGG | + | chr3.1:27016453-27016472 | MS.gene45598:intron | 25.0% |
! | CTTGTATTTCTCAATAGAAT+TGG | + | chr3.1:27013750-27013769 | MS.gene45598:CDS | 25.0% |
! | GAAAATGTAAATGTTTGGTA+GGG | - | chr3.1:27017569-27017588 | None:intergenic | 25.0% |
! | GATTAATGAATATGCTTTGA+AGG | - | chr3.1:27013783-27013802 | None:intergenic | 25.0% |
! | GCAGAAGAAGAAAATTATTA+TGG | - | chr3.1:27017808-27017827 | None:intergenic | 25.0% |
! | GTAAAACTTGAAAATATCGA+AGG | - | chr3.1:27014661-27014680 | None:intergenic | 25.0% |
! | GTTATATAATCTGAATCGTT+TGG | - | chr3.1:27012946-27012965 | None:intergenic | 25.0% |
! | TAATATGTACTATGAAGAAC+TGG | + | chr3.1:27013810-27013829 | MS.gene45598:CDS | 25.0% |
! | TATGACAAACAGACAATAAA+CGG | - | chr3.1:27014152-27014171 | None:intergenic | 25.0% |
! | TATTTATTCGTGTTTGCTTA+TGG | + | chr3.1:27018005-27018024 | MS.gene45598:CDS | 25.0% |
! | TCAGTTACAAAACAAACTTA+AGG | + | chr3.1:27012636-27012655 | MS.gene45598:intron | 25.0% |
! | TCTGTTATATAATAGCATTC+CGG | + | chr3.1:27017204-27017223 | MS.gene45598:intron | 25.0% |
! | TGTATTCTACTTTATGTGTT+CGG | - | chr3.1:27017626-27017645 | None:intergenic | 25.0% |
! | TTCAGTGTAATTATATGTGT+CGG | - | chr3.1:27012479-27012498 | None:intergenic | 25.0% |
! | TTTATTGGATCTATTCTCTT+TGG | + | chr3.1:27013568-27013587 | MS.gene45598:CDS | 25.0% |
! | TTTCACTCTATTCTTATATG+AGG | + | chr3.1:27016783-27016802 | MS.gene45598:CDS | 25.0% |
!! | AAAGAGTACAAATTTGCATT+TGG | - | chr3.1:27013316-27013335 | None:intergenic | 25.0% |
!! | ACAAATTTGAAGCTAAAACA+AGG | + | chr3.1:27013217-27013236 | MS.gene45598:CDS | 25.0% |
!! | ACATTTTATAAAACGGTACA+CGG | - | chr3.1:27016249-27016268 | None:intergenic | 25.0% |
!! | ATGAAGTATTAGTGCTATAT+AGG | + | chr3.1:27017136-27017155 | MS.gene45598:intron | 25.0% |
!! | GAAATGACATTTTAGATTCA+AGG | + | chr3.1:27012079-27012098 | MS.gene45598:intron | 25.0% |
!! | TAGATTTGAATCAGGTTTTA+AGG | + | chr3.1:27011753-27011772 | MS.gene45598:CDS | 25.0% |
!! | TTTTTGACGATTCATGTTTT+AGG | + | chr3.1:27015517-27015536 | MS.gene45598:intron | 25.0% |
!!! | ATCTGTTTTTCATTTCTTGA+CGG | + | chr3.1:27013693-27013712 | MS.gene45598:CDS | 25.0% |
!!! | CGCATGTGAAATTATTTTTT+TGG | - | chr3.1:27015013-27015032 | None:intergenic | 25.0% |
!!! | TCTTTTAGGATCAAAGAAAA+TGG | - | chr3.1:27013662-27013681 | None:intergenic | 25.0% |
!!! | TGGGTTTTAAATTCTACAAA+AGG | + | chr3.1:27014265-27014284 | MS.gene45598:CDS | 25.0% |
!!! | TTACGTTATTTTTATGCAGA+AGG | + | chr3.1:27012907-27012926 | MS.gene45598:intron | 25.0% |
AAAGAATAATGAACGGAAAC+TGG | + | chr3.1:27014088-27014107 | MS.gene45598:CDS | 30.0% | |
AACACTAATTGAAGCTACAT+AGG | - | chr3.1:27015460-27015479 | None:intergenic | 30.0% | |
AACTGGAATCAATTGATATC+AGG | + | chr3.1:27014016-27014035 | MS.gene45598:CDS | 30.0% | |
AATCAATGATTCATGATCCA+TGG | - | chr3.1:27014908-27014927 | None:intergenic | 30.0% | |
AATGGAGTTCATCAAATGTT+CGG | + | chr3.1:27013930-27013949 | MS.gene45598:CDS | 30.0% | |
AATTTCTATTTCCTTGTTGC+TGG | + | chr3.1:27011865-27011884 | MS.gene45598:CDS | 30.0% | |
ACAACGGAATTATGAAAAGA+TGG | + | chr3.1:27013614-27013633 | MS.gene45598:CDS | 30.0% | |
ACAATCCTTTCTGATAAAAC+TGG | + | chr3.1:27013889-27013908 | MS.gene45598:CDS | 30.0% | |
ACTGGAATCAATTGATATCA+GGG | + | chr3.1:27014017-27014036 | MS.gene45598:CDS | 30.0% | |
AGAGTTATATGTCATAAAGG+TGG | + | chr3.1:27013040-27013059 | MS.gene45598:CDS | 30.0% | |
AGTCGATATGCTAAATGAAA+AGG | - | chr3.1:27014683-27014702 | None:intergenic | 30.0% | |
ATATTGCAATTGCACAATTC+CGG | + | chr3.1:27016313-27016332 | MS.gene45598:CDS | 30.0% | |
ATGTCTAAGTTACATAAGAG+AGG | + | chr3.1:27012790-27012809 | MS.gene45598:intron | 30.0% | |
ATTGAGAAATACAAGGAGAT+GGG | - | chr3.1:27013745-27013764 | None:intergenic | 30.0% | |
CAACAAGATAGATTTGAATC+AGG | + | chr3.1:27011745-27011764 | MS.gene45598:CDS | 30.0% | |
CACAAGCTAGAATTAAGATA+TGG | + | chr3.1:27015124-27015143 | MS.gene45598:CDS | 30.0% | |
CGTAATACAGACTTCATATT+CGG | + | chr3.1:27013412-27013431 | MS.gene45598:CDS | 30.0% | |
CTCATAAAAGGTTACTAGAT+TGG | + | chr3.1:27016050-27016069 | MS.gene45598:intron | 30.0% | |
GAAAGATTACTTCTTGTACA+TGG | + | chr3.1:27016342-27016361 | MS.gene45598:CDS | 30.0% | |
GAAGAAGTTGTATAGCATTA+AGG | - | chr3.1:27013719-27013738 | None:intergenic | 30.0% | |
GGAGTTTGAAGAAAAAACTT+TGG | + | chr3.1:27014762-27014781 | MS.gene45598:CDS | 30.0% | |
GTGATAGTTAAAGATGAAGA+CGG | + | chr3.1:27014579-27014598 | MS.gene45598:CDS | 30.0% | |
TATTAGTGCTATATAGGCTT+AGG | + | chr3.1:27017142-27017161 | MS.gene45598:intron | 30.0% | |
TATTGAGAAATACAAGGAGA+TGG | - | chr3.1:27013746-27013765 | None:intergenic | 30.0% | |
TCAAACTTGAATGAAGAACT+CGG | + | chr3.1:27013856-27013875 | MS.gene45598:CDS | 30.0% | |
TCAGAACAGTTTATCAATGA+TGG | + | chr3.1:27014290-27014309 | MS.gene45598:CDS | 30.0% | |
TCATGTTAAATAATGCGGAA+AGG | + | chr3.1:27014468-27014487 | MS.gene45598:intron | 30.0% | |
TGAAATTCAAGCATTAGAGA+AGG | + | chr3.1:27015344-27015363 | MS.gene45598:CDS | 30.0% | |
TGATAGTTAAAGATGAAGAC+GGG | + | chr3.1:27014580-27014599 | MS.gene45598:CDS | 30.0% | |
TGCATGGAAATTATGATTCA+AGG | - | chr3.1:27014708-27014727 | None:intergenic | 30.0% | |
TTATTGGTACCTCTCATAAA+AGG | + | chr3.1:27016038-27016057 | MS.gene45598:intron | 30.0% | |
TTATTTCCAATAAACTCTCC+AGG | + | chr3.1:27016548-27016567 | MS.gene45598:intron | 30.0% | |
TTCTCTAATGCTTGAATTTC+AGG | - | chr3.1:27015345-27015364 | None:intergenic | 30.0% | |
TTGATAGAGAATGAACAAGT+TGG | + | chr3.1:27012367-27012386 | MS.gene45598:intron | 30.0% | |
TTTCTACATGTTGAGAAAGA+CGG | + | chr3.1:27012732-27012751 | MS.gene45598:intron | 30.0% | |
TTTGAATGATCTTACCATTG+TGG | - | chr3.1:27016391-27016410 | None:intergenic | 30.0% | |
! | AGAATTTTGTTGCTCTGTAA+AGG | + | chr3.1:27014603-27014622 | MS.gene45598:CDS | 30.0% |
! | ATCTAAGATCACTTTCTTAC+TGG | + | chr3.1:27012200-27012219 | MS.gene45598:intron | 30.0% |
! | ATCTAGTAACCTTTTATGAG+AGG | - | chr3.1:27016050-27016069 | None:intergenic | 30.0% |
! | CAAATTTGTACTCTTTTGTC+GGG | + | chr3.1:27013320-27013339 | MS.gene45598:CDS | 30.0% |
! | CTTCATTCAAGTTTGAAGTA+CGG | - | chr3.1:27013852-27013871 | None:intergenic | 30.0% |
! | GCAAATTTGTACTCTTTTGT+CGG | + | chr3.1:27013319-27013338 | MS.gene45598:CDS | 30.0% |
! | GCTGCTTATGATTATTGTTT+TGG | + | chr3.1:27015996-27016015 | MS.gene45598:intron | 30.0% |
! | TGGTGGCAATTTTGAATATA+CGG | + | chr3.1:27013060-27013079 | MS.gene45598:CDS | 30.0% |
! | TTCATTCAAGTTTGAAGTAC+GGG | - | chr3.1:27013851-27013870 | None:intergenic | 30.0% |
! | TTTAGGATCAAAGAAAATGG+TGG | - | chr3.1:27013659-27013678 | None:intergenic | 30.0% |
! | TTTGAAGCTAAAACAAGGTT+TGG | + | chr3.1:27013222-27013241 | MS.gene45598:CDS | 30.0% |
!! | AAACAACCACATTTTAATCG+TGG | - | chr3.1:27018159-27018178 | None:intergenic | 30.0% |
!! | AAGTTCCAGTTTTATCAGAA+AGG | - | chr3.1:27013897-27013916 | None:intergenic | 30.0% |
!! | ATTAAGATATGGGTTTTGAC+TGG | + | chr3.1:27015135-27015154 | MS.gene45598:CDS | 30.0% |
!! | ATTCATGTTTTAGGCATCAA+GGG | + | chr3.1:27015526-27015545 | MS.gene45598:intron | 30.0% |
!!! | TATTACGAAGTTTTGAGTCT+CGG | - | chr3.1:27013399-27013418 | None:intergenic | 30.0% |
!!! | TTAAGATATGGGTTTTGACT+GGG | + | chr3.1:27015136-27015155 | MS.gene45598:CDS | 30.0% |
!!! | TTTCCTTATTTTTGTTGGTG+TGG | + | chr3.1:27015806-27015825 | MS.gene45598:intron | 30.0% |
!!! | TTTTTTTGGTTACCCCATTT+TGG | - | chr3.1:27014999-27015018 | None:intergenic | 30.0% |
AAAAACCAGTCATTGTATGC+AGG | - | chr3.1:27016832-27016851 | None:intergenic | 35.0% | |
AAACTGCTTTCTGCATCTAA+AGG | + | chr3.1:27015581-27015600 | MS.gene45598:CDS | 35.0% | |
AACTGCTCAAACAATGACTT+AGG | - | chr3.1:27011832-27011851 | None:intergenic | 35.0% | |
AACTGCTTTCTGCATCTAAA+GGG | + | chr3.1:27015582-27015601 | MS.gene45598:CDS | 35.0% | |
AAGCCACACCAACAAAAATA+AGG | - | chr3.1:27015812-27015831 | None:intergenic | 35.0% | |
AAGGACAAATTGTCAAGTAG+AGG | - | chr3.1:27015783-27015802 | None:intergenic | 35.0% | |
AATAGCAATAGAACCCCAAA+TGG | - | chr3.1:27017982-27018001 | None:intergenic | 35.0% | |
ACACATGTGGTTACATTCAA+TGG | - | chr3.1:27017072-27017091 | None:intergenic | 35.0% | |
ACTAAACGTGACTTGAACAA+CGG | + | chr3.1:27013598-27013617 | MS.gene45598:CDS | 35.0% | |
AGGACAAATTGTCAAGTAGA+GGG | - | chr3.1:27015782-27015801 | None:intergenic | 35.0% | |
AGTCATTGTTTGAGCAGTTT+AGG | + | chr3.1:27011833-27011852 | MS.gene45598:CDS | 35.0% | |
AGTGTTCAATACAACACATG+TGG | - | chr3.1:27017085-27017104 | None:intergenic | 35.0% | |
ATAGCACTAACAGCAGTATA+AGG | - | chr3.1:27011916-27011935 | None:intergenic | 35.0% | |
ATTCAAGCATTAGAGAAGGA+TGG | + | chr3.1:27015348-27015367 | MS.gene45598:CDS | 35.0% | |
ATTCACAGATTGGAAGACAA+GGG | + | chr3.1:27011695-27011714 | MS.gene45598:CDS | 35.0% | |
ATTGTTTGAGCAGTTTAGGA+GGG | + | chr3.1:27011837-27011856 | MS.gene45598:CDS | 35.0% | |
CAGAAAGGATTGTGTCAATT+TGG | - | chr3.1:27013882-27013901 | None:intergenic | 35.0% | |
CTGTCTTCTCTTTCATAATC+CGG | - | chr3.1:27017226-27017245 | None:intergenic | 35.0% | |
CTTCCTTTAGCTGTTATAGT+TGG | + | chr3.1:27011937-27011956 | MS.gene45598:CDS | 35.0% | |
GAAATGAAAAACAGATGCTG+CGG | - | chr3.1:27013689-27013708 | None:intergenic | 35.0% | |
GAAGTAATCTTTCCAGATAC+CGG | - | chr3.1:27016335-27016354 | None:intergenic | 35.0% | |
GAATGCTCTCTCTTAAACTT+TGG | - | chr3.1:27011679-27011698 | None:intergenic | 35.0% | |
GAGTAATAAGCTATGAAGCA+TGG | - | chr3.1:27012578-27012597 | None:intergenic | 35.0% | |
GATCGAAAAGAACCAATCAA+AGG | + | chr3.1:27014048-27014067 | MS.gene45598:CDS | 35.0% | |
GATTCTCACATTATTTGTCG+CGG | + | chr3.1:27018103-27018122 | MS.gene45598:CDS | 35.0% | |
GGTAAAACAACATTAGCCAT+CGG | + | chr3.1:27016087-27016106 | MS.gene45598:CDS | 35.0% | |
GTACAATGGATGAGGTATAA+GGG | + | chr3.1:27018197-27018216 | MS.gene45598:CDS | 35.0% | |
GTGTACAGAATGTCCTATTT+AGG | + | chr3.1:27017739-27017758 | MS.gene45598:CDS | 35.0% | |
GTGTATCTTCAGATATCTGA+AGG | + | chr3.1:27015554-27015573 | MS.gene45598:CDS | 35.0% | |
GTTATATGTCATAAAGGTGG+TGG | + | chr3.1:27013043-27013062 | MS.gene45598:CDS | 35.0% | |
GTTTCCTATGCATCATGAAA+GGG | + | chr3.1:27018175-27018194 | MS.gene45598:CDS | 35.0% | |
TAAGCTATGAAGCATGGATA+CGG | - | chr3.1:27012572-27012591 | None:intergenic | 35.0% | |
TACAGAATGTCCTATTTAGG+TGG | + | chr3.1:27017742-27017761 | MS.gene45598:CDS | 35.0% | |
TACTTCTTGTACATGGACAT+TGG | + | chr3.1:27016349-27016368 | MS.gene45598:CDS | 35.0% | |
TAGAAGACAAGCTCCAAAAT+GGG | + | chr3.1:27014983-27015002 | MS.gene45598:CDS | 35.0% | |
TAGAGGGAGAAACAAAGAAA+AGG | - | chr3.1:27015766-27015785 | None:intergenic | 35.0% | |
TGAGCATCCAACTTAGAATT+CGG | - | chr3.1:27017770-27017789 | None:intergenic | 35.0% | |
TGTGTTGTATTGAACACTGA+CGG | + | chr3.1:27017087-27017106 | MS.gene45598:intron | 35.0% | |
TGTTTCCTATGCATCATGAA+AGG | + | chr3.1:27018174-27018193 | MS.gene45598:CDS | 35.0% | |
TTCAAACTCCCTTCCATTAA+TGG | - | chr3.1:27014752-27014771 | None:intergenic | 35.0% | |
TTCTTCATCAAGTTCACGAT+AGG | - | chr3.1:27014836-27014855 | None:intergenic | 35.0% | |
TTCTTCTGCACTAAAGCAAT+AGG | + | chr3.1:27017819-27017838 | MS.gene45598:CDS | 35.0% | |
TTGAAAATATCGAAGGCTAC+AGG | - | chr3.1:27014654-27014673 | None:intergenic | 35.0% | |
TTTCCTATCTTGTACCAAGA+AGG | + | chr3.1:27017717-27017736 | MS.gene45598:CDS | 35.0% | |
TTTGAAAGGCTTGCCATTAA+TGG | + | chr3.1:27014736-27014755 | MS.gene45598:CDS | 35.0% | |
! | AAGAAAATGGTGGAATCATC+TGG | - | chr3.1:27013649-27013668 | None:intergenic | 35.0% |
! | AGATTTTCGTCGGAAAAAAC+AGG | + | chr3.1:27011987-27012006 | MS.gene45598:CDS | 35.0% |
! | ATTCTAAGTTGGATGCTCAA+CGG | + | chr3.1:27017771-27017790 | MS.gene45598:CDS | 35.0% |
! | CAGTTTATCAATGATGGAGT+TGG | + | chr3.1:27014296-27014315 | MS.gene45598:CDS | 35.0% |
! | GCAATTTTGAATATACGGAG+TGG | + | chr3.1:27013065-27013084 | MS.gene45598:CDS | 35.0% |
! | GGATCATGAATCATTGATTG+AGG | + | chr3.1:27014909-27014928 | MS.gene45598:CDS | 35.0% |
! | GTAATTATATGTGTCGGTGT+CGG | - | chr3.1:27012473-27012492 | None:intergenic | 35.0% |
! | GTTACTAGATTGGTCAAAGA+AGG | + | chr3.1:27016060-27016079 | MS.gene45598:CDS | 35.0% |
! | TACTTTATGTGTTCGGCTTT+TGG | - | chr3.1:27017619-27017638 | None:intergenic | 35.0% |
! | TGTTATAGTTGGTGCAACTA+TGG | + | chr3.1:27011948-27011967 | MS.gene45598:CDS | 35.0% |
! | TTGCTTTGGATTCTGTTTCT+CGG | + | chr3.1:27012140-27012159 | MS.gene45598:intron | 35.0% |
! | TTTGGGGTTCTATTGCTATT+TGG | + | chr3.1:27017982-27018001 | MS.gene45598:CDS | 35.0% |
!! | AACAAACTTAAGGCCTTGTT+TGG | + | chr3.1:27012646-27012665 | MS.gene45598:intron | 35.0% |
!! | AACTTTGACTTGCAACTCAA+TGG | + | chr3.1:27013912-27013931 | MS.gene45598:CDS | 35.0% |
!! | ATTAGTTCTGCAGGATATTG+AGG | + | chr3.1:27013006-27013025 | MS.gene45598:intron | 35.0% |
!! | CATGTATACTTGTGTCGTTT+GGG | + | chr3.1:27017899-27017918 | MS.gene45598:CDS | 35.0% |
!! | GATTCATGTTTTAGGCATCA+AGG | + | chr3.1:27015525-27015544 | MS.gene45598:intron | 35.0% |
!! | GTTGTTTTCATAAGCTATCC+TGG | - | chr3.1:27016569-27016588 | None:intergenic | 35.0% |
!!! | AAGGTGTTGAAGATTTTCGT+CGG | + | chr3.1:27011977-27011996 | MS.gene45598:CDS | 35.0% |
!!! | TAAGATATGGGTTTTGACTG+GGG | + | chr3.1:27015137-27015156 | MS.gene45598:CDS | 35.0% |
AAAGGCTTGCCATTAATGGA+AGG | + | chr3.1:27014740-27014759 | MS.gene45598:CDS | 40.0% | |
AACTGGACGAAAGCAGTAAT+AGG | - | chr3.1:27013150-27013169 | None:intergenic | 40.0% | |
AAGCTAAGATACCAGCAACA+AGG | - | chr3.1:27011879-27011898 | None:intergenic | 40.0% | |
AAGGCTTGCCATTAATGGAA+GGG | + | chr3.1:27014741-27014760 | MS.gene45598:CDS | 40.0% | |
AATCATAAGCAGCATGCACA+CGG | - | chr3.1:27015989-27016008 | None:intergenic | 40.0% | |
AATGGCAACATGTTGTACCA+AGG | - | chr3.1:27017964-27017983 | None:intergenic | 40.0% | |
AATTGCACAATTCCGGTATC+TGG | + | chr3.1:27016320-27016339 | MS.gene45598:CDS | 40.0% | |
ACACCTTCTTGGTACAAGAT+AGG | - | chr3.1:27017723-27017742 | None:intergenic | 40.0% | |
ACGTAAACAGAGAAGAGAGT+TGG | - | chr3.1:27014370-27014389 | None:intergenic | 40.0% | |
AGAAGACAAGCTCCAAAATG+GGG | + | chr3.1:27014984-27015003 | MS.gene45598:CDS | 40.0% | |
AGACAAGATGGCTATCATGA+AGG | + | chr3.1:27015374-27015393 | MS.gene45598:CDS | 40.0% | |
AGCGAAAATTACAGTCACCA+TGG | + | chr3.1:27014888-27014907 | MS.gene45598:CDS | 40.0% | |
AGCTATCCTGGAGAGTTTAT+TGG | - | chr3.1:27016557-27016576 | None:intergenic | 40.0% | |
AGTACCTAGCAGATACATCT+TGG | - | chr3.1:27016912-27016931 | None:intergenic | 40.0% | |
ATGCTTCAAGAAGCTGATGT+AGG | + | chr3.1:27016132-27016151 | MS.gene45598:CDS | 40.0% | |
CAAAATAACTGCAGGTAGGT+TGG | + | chr3.1:27012393-27012412 | MS.gene45598:intron | 40.0% | |
CATGCAGTGTCATGTTTGAA+AGG | + | chr3.1:27014722-27014741 | MS.gene45598:intron | 40.0% | |
CATTCACAGATTGGAAGACA+AGG | + | chr3.1:27011694-27011713 | MS.gene45598:CDS | 40.0% | |
CATTGTTTGAGCAGTTTAGG+AGG | + | chr3.1:27011836-27011855 | MS.gene45598:CDS | 40.0% | |
CCAAACGACACAAGTATACA+TGG | - | chr3.1:27017901-27017920 | None:intergenic | 40.0% | |
CTACGTTGAAACGATGAACT+TGG | + | chr3.1:27013186-27013205 | MS.gene45598:CDS | 40.0% | |
CTATGAAGAACTGGACAAAC+CGG | + | chr3.1:27013819-27013838 | MS.gene45598:CDS | 40.0% | |
CTTTCAAACATGACACTGCA+TGG | - | chr3.1:27014724-27014743 | None:intergenic | 40.0% | |
GAGAGGAATCTAATCCTTCT+CGG | + | chr3.1:27014949-27014968 | MS.gene45598:CDS | 40.0% | |
GAGCAAAATCGAGATGAAGA+TGG | + | chr3.1:27013501-27013520 | MS.gene45598:CDS | 40.0% | |
GATCTAGCTATTAACGTAGC+TGG | - | chr3.1:27012672-27012691 | None:intergenic | 40.0% | |
GCACCAACTATAACAGCTAA+AGG | - | chr3.1:27011943-27011962 | None:intergenic | 40.0% | |
GCAGTTGTTGAAAAGCTTGA+AGG | - | chr3.1:27018038-27018057 | None:intergenic | 40.0% | |
GCATTTGCTCTGATAATCGA+TGG | + | chr3.1:27015617-27015636 | MS.gene45598:CDS | 40.0% | |
GGTACAATGGATGAGGTATA+AGG | + | chr3.1:27018196-27018215 | MS.gene45598:CDS | 40.0% | |
GTAGAAGACAAGCTCCAAAA+TGG | + | chr3.1:27014982-27015001 | MS.gene45598:CDS | 40.0% | |
GTCACTTGTTTATGCTCTAG+AGG | + | chr3.1:27015643-27015662 | MS.gene45598:CDS | 40.0% | |
GTTCCAAAATAACTGCAGGT+AGG | + | chr3.1:27012389-27012408 | MS.gene45598:intron | 40.0% | |
GTTGAAACGATGAACTTGGA+TGG | + | chr3.1:27013190-27013209 | MS.gene45598:CDS | 40.0% | |
TCATCAAATGTTCGGTTGCT+GGG | + | chr3.1:27013938-27013957 | MS.gene45598:CDS | 40.0% | |
TGCAATATCACTAGCCATGA+CGG | - | chr3.1:27016301-27016320 | None:intergenic | 40.0% | |
TGGTACAACATGTTGCCATT+TGG | + | chr3.1:27017964-27017983 | MS.gene45598:CDS | 40.0% | |
TGTACCCTTTCATGATGCAT+AGG | - | chr3.1:27018182-27018201 | None:intergenic | 40.0% | |
TTCATCAAATGTTCGGTTGC+TGG | + | chr3.1:27013937-27013956 | MS.gene45598:CDS | 40.0% | |
TTCTCTGATTAGACGTGTCT+CGG | + | chr3.1:27012428-27012447 | MS.gene45598:intron | 40.0% | |
TTCTGTATAACATCTGCACG+AGG | - | chr3.1:27014123-27014142 | None:intergenic | 40.0% | |
TTGACCAAGATGTATCTGCT+AGG | + | chr3.1:27016905-27016924 | MS.gene45598:CDS | 40.0% | |
! | AGATTGGTCAAAGAAGGAAC+TGG | + | chr3.1:27016066-27016085 | MS.gene45598:CDS | 40.0% |
! | ATCAATGATGGAGTTGGATC+CGG | + | chr3.1:27014302-27014321 | MS.gene45598:CDS | 40.0% |
! | ATCACAAATGCTGCTTCATC+AGG | - | chr3.1:27014231-27014250 | None:intergenic | 40.0% |
! | ATGAAAGGGTACAATGGATG+AGG | + | chr3.1:27018189-27018208 | MS.gene45598:CDS | 40.0% |
! | ATTTTGCTCCTTTTCGAAGG+AGG | - | chr3.1:27013490-27013509 | None:intergenic | 40.0% |
! | CAAATGTATCAGCGTCGTTT+TGG | - | chr3.1:27012123-27012142 | None:intergenic | 40.0% |
! | CAACCTACCTGCAGTTATTT+TGG | - | chr3.1:27012395-27012414 | None:intergenic | 40.0% |
! | CCATGTATACTTGTGTCGTT+TGG | + | chr3.1:27017898-27017917 | MS.gene45598:CDS | 40.0% |
! | GCAAGCTTTTCAATACACTC+AGG | - | chr3.1:27015105-27015124 | None:intergenic | 40.0% |
! | GGTACAACATGTTGCCATTT+GGG | + | chr3.1:27017965-27017984 | MS.gene45598:CDS | 40.0% |
! | GGTGACTGTAATTTTCGCTT+CGG | - | chr3.1:27014887-27014906 | None:intergenic | 40.0% |
! | GTACAACATGTTGCCATTTG+GGG | + | chr3.1:27017966-27017985 | MS.gene45598:CDS | 40.0% |
! | GTTGGTTCCAAAATAACTGC+AGG | + | chr3.1:27012385-27012404 | MS.gene45598:intron | 40.0% |
! | TCCTAGTATGTCTTTTCCAG+CGG | - | chr3.1:27017874-27017893 | None:intergenic | 40.0% |
! | TCGATTTTGCTCCTTTTCGA+AGG | - | chr3.1:27013493-27013512 | None:intergenic | 40.0% |
! | TGCATCATGAAAGGGTACAA+TGG | + | chr3.1:27018183-27018202 | MS.gene45598:CDS | 40.0% |
! | TTCTAAGTTGGATGCTCAAC+GGG | + | chr3.1:27017772-27017791 | MS.gene45598:CDS | 40.0% |
! | TTGGGTTGTAAACCTACAGA+TGG | + | chr3.1:27017917-27017936 | MS.gene45598:CDS | 40.0% |
! | TTTCTGGCAATGAGGTTGAA+AGG | + | chr3.1:27014325-27014344 | MS.gene45598:CDS | 40.0% |
! | TTTTGCTCCTTTTCGAAGGA+GGG | - | chr3.1:27013489-27013508 | None:intergenic | 40.0% |
! | TTTTGTGACGTTGCCTTGAT+TGG | - | chr3.1:27016695-27016714 | None:intergenic | 40.0% |
!! | AAGAGAGAGCATTCACAGAT+TGG | + | chr3.1:27011685-27011704 | MS.gene45598:CDS | 40.0% |
!! | AGCTAACTGATTAGTTCTGC+AGG | + | chr3.1:27012997-27013016 | MS.gene45598:intron | 40.0% |
!! | GATTGGTTCTTTTCGATCAC+TGG | - | chr3.1:27014046-27014065 | None:intergenic | 40.0% |
!! | TACATGGACATTGGTGTTAC+AGG | + | chr3.1:27016358-27016377 | MS.gene45598:CDS | 40.0% |
!! | TGACAGCAGCTTTGAAATCA+TGG | - | chr3.1:27013282-27013301 | None:intergenic | 40.0% |
!! | TGGAAGACAAGGGTATTCTA+GGG | + | chr3.1:27011705-27011724 | MS.gene45598:CDS | 40.0% |
!! | TTGGAAGACAAGGGTATTCT+AGG | + | chr3.1:27011704-27011723 | MS.gene45598:CDS | 40.0% |
!!! | GGTTTTGACTGGGGATAAAA+TGG | + | chr3.1:27015146-27015165 | MS.gene45598:CDS | 40.0% |
AAAGCAGTAATAGGTCGGCA+GGG | - | chr3.1:27013141-27013160 | None:intergenic | 45.0% | |
AAGCACTTGCGAGACAGTTT+AGG | + | chr3.1:27016478-27016497 | MS.gene45598:intron | 45.0% | |
ACAACATTAGCCATCGGTGA+TGG | + | chr3.1:27016093-27016112 | MS.gene45598:CDS | 45.0% | |
ACCGCTGGAAAAGACATACT+AGG | + | chr3.1:27017870-27017889 | MS.gene45598:CDS | 45.0% | |
AGAATCCAAAAGGAAGCCGA+TGG | - | chr3.1:27018089-27018108 | None:intergenic | 45.0% | |
ATCGTGGAGCACGAAAAGTA+TGG | - | chr3.1:27018143-27018162 | None:intergenic | 45.0% | |
ATCTTGGTCAAAGACCCCAA+GGG | - | chr3.1:27016896-27016915 | None:intergenic | 45.0% | |
ATGGAGACTGCCATCAACAT+TGG | + | chr3.1:27015165-27015184 | MS.gene45598:CDS | 45.0% | |
CAAGAAGCTGATGTAGGTGT+TGG | + | chr3.1:27016138-27016157 | MS.gene45598:CDS | 45.0% | |
CAAGCATTAGAGAAGGATGG+AGG | + | chr3.1:27015351-27015370 | MS.gene45598:CDS | 45.0% | |
CATCAAATGTTCGGTTGCTG+GGG | + | chr3.1:27013939-27013958 | MS.gene45598:CDS | 45.0% | |
CGACAACACCGGTAAGAATT+TGG | + | chr3.1:27017024-27017043 | MS.gene45598:intron | 45.0% | |
CGACGCTGATACATTTGCTT+TGG | + | chr3.1:27012126-27012145 | MS.gene45598:intron | 45.0% | |
CGTGCTCCACGATTAAAATG+TGG | + | chr3.1:27018150-27018169 | MS.gene45598:CDS | 45.0% | |
CTTCAAGCCTTTGACGAGAA+CGG | + | chr3.1:27017843-27017862 | MS.gene45598:CDS | 45.0% | |
GAGGTGTATGCATCATTCTC+TGG | + | chr3.1:27016802-27016821 | MS.gene45598:CDS | 45.0% | |
GAGTGGAAGAATCTCAAGGT+AGG | + | chr3.1:27013082-27013101 | MS.gene45598:CDS | 45.0% | |
GGACATTCTGTACACCTTCT+TGG | - | chr3.1:27017734-27017753 | None:intergenic | 45.0% | |
GGACGAAAGCAGTAATAGGT+CGG | - | chr3.1:27013146-27013165 | None:intergenic | 45.0% | |
GTATTGAACACTGACGGTGT+CGG | + | chr3.1:27017093-27017112 | MS.gene45598:intron | 45.0% | |
GTGAGTGAATATGCTGATGC+AGG | + | chr3.1:27014790-27014809 | MS.gene45598:CDS | 45.0% | |
GTGATTGCTGCAAGAGAAGT+GGG | + | chr3.1:27014246-27014265 | MS.gene45598:CDS | 45.0% | |
TACGGAGTGGAAGAATCTCA+AGG | + | chr3.1:27013078-27013097 | MS.gene45598:CDS | 45.0% | |
TCAACCTCATTGCCAGAAAC+CGG | - | chr3.1:27014324-27014343 | None:intergenic | 45.0% | |
TGGAGACTGCCATCAACATT+GGG | + | chr3.1:27015166-27015185 | MS.gene45598:CDS | 45.0% | |
TGTGATTGCTGCAAGAGAAG+TGG | + | chr3.1:27014245-27014264 | MS.gene45598:CDS | 45.0% | |
TGTTTGTCATACTGCCATGC+CGG | + | chr3.1:27014161-27014180 | MS.gene45598:CDS | 45.0% | |
TTAACGTAGCTGGCCAAACA+AGG | - | chr3.1:27012662-27012681 | None:intergenic | 45.0% | |
TTACAGGAGGATGTCCACAA+TGG | + | chr3.1:27016374-27016393 | MS.gene45598:CDS | 45.0% | |
TTCGGAGCAGTCATCTTTAC+TGG | + | chr3.1:27013430-27013449 | MS.gene45598:CDS | 45.0% | |
! | AGTTGGTGCAACTATGGTGA+AGG | + | chr3.1:27011954-27011973 | MS.gene45598:CDS | 45.0% |
! | GCACAGTTCAGGTTTAGATC+AGG | - | chr3.1:27012603-27012622 | None:intergenic | 45.0% |
! | GGTTTTTCCGTTCTCGTCAA+AGG | - | chr3.1:27017853-27017872 | None:intergenic | 45.0% |
! | GTTGGAATCAGTGGTGTTGA+AGG | + | chr3.1:27016156-27016175 | MS.gene45598:CDS | 45.0% |
! | TTGAGCAAGCCATTGGTAGT+AGG | + | chr3.1:27013989-27014008 | MS.gene45598:CDS | 45.0% |
! | TTTGCTCCTTTTCGAAGGAG+GGG | - | chr3.1:27013488-27013507 | None:intergenic | 45.0% |
!! | ATGGACATTGGTGTTACAGG+AGG | + | chr3.1:27016361-27016380 | MS.gene45598:CDS | 45.0% |
!! | GATGTAGGTGTTGGAATCAG+TGG | + | chr3.1:27016147-27016166 | MS.gene45598:CDS | 45.0% |
!! | TATCAGCGTCGTTTTGGTGT+CGG | - | chr3.1:27012117-27012136 | None:intergenic | 45.0% |
!! | TCGGGAGCATGGATTTTGAA+GGG | + | chr3.1:27013338-27013357 | MS.gene45598:CDS | 45.0% |
AACGCCAAACACGACAACAC+CGG | + | chr3.1:27017013-27017032 | MS.gene45598:intron | 50.0% | |
ACAGAGGTTGAGCAAGCCAT+TGG | + | chr3.1:27013982-27014001 | MS.gene45598:CDS | 50.0% | |
AGAAGCTGCTGAGGAGAAAG+TGG | - | chr3.1:27013373-27013392 | None:intergenic | 50.0% | |
ATGGAGTTGGATCCGGTTTC+TGG | + | chr3.1:27014309-27014328 | MS.gene45598:CDS | 50.0% | |
CAGTTCCGACCTACTACCAA+TGG | - | chr3.1:27014001-27014020 | None:intergenic | 50.0% | |
CATACCAGAGCCTTCTGCTT+TGG | - | chr3.1:27015737-27015756 | None:intergenic | 50.0% | |
CATCTTGGTCAAAGACCCCA+AGG | - | chr3.1:27016897-27016916 | None:intergenic | 50.0% | |
CGTTCTCGTCAAAGGCTTGA+AGG | - | chr3.1:27017845-27017864 | None:intergenic | 50.0% | |
CTTTACTGGTCACGACACGA+AGG | + | chr3.1:27013444-27013463 | MS.gene45598:CDS | 50.0% | |
GAAAGCAGTAATAGGTCGGC+AGG | - | chr3.1:27013142-27013161 | None:intergenic | 50.0% | |
GAAGGATGGAGGAGACAAGA+TGG | + | chr3.1:27015362-27015381 | MS.gene45598:CDS | 50.0% | |
GAATTCGGCGCCACCTAAAT+AGG | - | chr3.1:27017755-27017774 | None:intergenic | 50.0% | |
GACAGCCTGCATACAATGAC+TGG | + | chr3.1:27016824-27016843 | MS.gene45598:CDS | 50.0% | |
GAGCTTGTCTTCTACAGCAG+TGG | - | chr3.1:27014977-27014996 | None:intergenic | 50.0% | |
GCAGACTGCATCTTCGTAAC+TGG | - | chr3.1:27013167-27013186 | None:intergenic | 50.0% | |
GGTGCAACTATGGTGAAGGA+AGG | + | chr3.1:27011958-27011977 | MS.gene45598:CDS | 50.0% | |
GTCATTAGCTCCATCACCGA+TGG | - | chr3.1:27016106-27016125 | None:intergenic | 50.0% | |
GTTAGTGTCTGTGTCGTGTC+TGG | + | chr3.1:27012537-27012556 | MS.gene45598:intron | 50.0% | |
TTGTATCCTCTCTCCTCCCT+AGG | + | chr3.1:27016275-27016294 | MS.gene45598:intron | 50.0% | |
! | ATCTGCTAGGTACTGCGTCA+AGG | + | chr3.1:27016918-27016937 | MS.gene45598:CDS | 50.0% |
! | CAGAGCAAATGCTTGCTGAG+AGG | - | chr3.1:27015609-27015628 | None:intergenic | 50.0% |
! | CAGTGGTGTTGAAGGAATGC+AGG | + | chr3.1:27016164-27016183 | MS.gene45598:CDS | 50.0% |
! | CATTGGTAGTAGGTCGGAAC+TGG | + | chr3.1:27013999-27014018 | MS.gene45598:CDS | 50.0% |
! | GATTAGACGTGTCTCGGTGT+CGG | + | chr3.1:27012434-27012453 | MS.gene45598:intron | 50.0% |
! | GCAAGCCATTGGTAGTAGGT+CGG | + | chr3.1:27013993-27014012 | MS.gene45598:CDS | 50.0% |
! | GTACTCTTTTGTCGGGAGCA+TGG | + | chr3.1:27013327-27013346 | MS.gene45598:CDS | 50.0% |
! | TCTTGTCGCTTGCTTCGACA+AGG | + | chr3.1:27015288-27015307 | MS.gene45598:CDS | 50.0% |
! | TTGCTCCTTTTCGAAGGAGG+GGG | - | chr3.1:27013487-27013506 | None:intergenic | 50.0% |
! | TTTGAAGTACGGGCAAGAGC+CGG | - | chr3.1:27013841-27013860 | None:intergenic | 50.0% |
!! | CTTACCGGTGTTGTCGTGTT+TGG | - | chr3.1:27017020-27017039 | None:intergenic | 50.0% |
!! | GGTGATGGAGCTAATGACGT+GGG | + | chr3.1:27016108-27016127 | MS.gene45598:CDS | 50.0% |
!! | GTCGGGAGCATGGATTTTGA+AGG | + | chr3.1:27013337-27013356 | MS.gene45598:CDS | 50.0% |
!!! | TTGCTCCATCGGCTTCCTTT+TGG | + | chr3.1:27018081-27018100 | MS.gene45598:CDS | 50.0% |
ATCACTAGCCATGACGGCCT+AGG | - | chr3.1:27016295-27016314 | None:intergenic | 55.0% | |
ATCGCCAAAGCAGAAGGCTC+TGG | + | chr3.1:27015730-27015749 | MS.gene45598:CDS | 55.0% | |
CCTGTTTCCTCGTCCACTTC+CGG | - | chr3.1:27014183-27014202 | None:intergenic | 55.0% | |
CGCTGAGACTCTTGCTCCAT+CGG | + | chr3.1:27018070-27018089 | MS.gene45598:CDS | 55.0% | |
CGCTGTGCGATACTTCACCT+TGG | + | chr3.1:27017944-27017963 | MS.gene45598:CDS | 55.0% | |
GACGAGAACGGAAAAACCGC+TGG | + | chr3.1:27017855-27017874 | MS.gene45598:CDS | 55.0% | |
GCTCAACCTCTGTGACACCA+CGG | - | chr3.1:27013975-27013994 | None:intergenic | 55.0% | |
GTCAAAGACCCCAAGGGCAA+TGG | - | chr3.1:27016890-27016909 | None:intergenic | 55.0% | |
TCACTAGCCATGACGGCCTA+GGG | - | chr3.1:27016294-27016313 | None:intergenic | 55.0% | |
TCATACTGCCATGCCGGAAG+TGG | + | chr3.1:27014167-27014186 | MS.gene45598:CDS | 55.0% | |
TCGCTCATCGCCAAAGCAGA+AGG | + | chr3.1:27015724-27015743 | MS.gene45598:CDS | 55.0% | |
TCGGTTGCTGGGGTAGCTTA+TGG | + | chr3.1:27013949-27013968 | MS.gene45598:CDS | 55.0% | |
TCTCGGAGAAGAAGCTGCTG+AGG | - | chr3.1:27013382-27013401 | None:intergenic | 55.0% | |
! | GATGCTGCGGCGACTCTTTT+AGG | - | chr3.1:27013676-27013695 | None:intergenic | 55.0% |
! | GGTGGCGCCGAATTCTAAGT+TGG | + | chr3.1:27017760-27017779 | MS.gene45598:CDS | 55.0% |
!! | CGGTGATGGAGCTAATGACG+TGG | + | chr3.1:27016107-27016126 | MS.gene45598:CDS | 55.0% |
!! | GGATCCGGTTTCTGGCAATG+AGG | + | chr3.1:27014317-27014336 | MS.gene45598:CDS | 55.0% |
!! | GTGCTGACTCAGCACAGTTC+AGG | - | chr3.1:27012614-27012633 | None:intergenic | 55.0% |
!! | TGCTCTGTAAAGGCGCTGAC+AGG | + | chr3.1:27014613-27014632 | MS.gene45598:CDS | 55.0% |
!! | TTATGGCCGTGGTGTCACAG+AGG | + | chr3.1:27013966-27013985 | MS.gene45598:CDS | 55.0% |
AAGACCCCAAGGGCAATGGC+AGG | - | chr3.1:27016886-27016905 | None:intergenic | 60.0% | |
CCACTCCCCCTCCTTCGAAA+AGG | + | chr3.1:27013479-27013498 | MS.gene45598:CDS | 60.0% | |
CCGGAAGTGGACGAGGAAAC+AGG | + | chr3.1:27014180-27014199 | MS.gene45598:CDS | 60.0% | |
CGCTTCCTGCCATTGCCCTT+GGG | + | chr3.1:27016878-27016897 | MS.gene45598:CDS | 60.0% | |
GCTTCCTGCCATTGCCCTTG+GGG | + | chr3.1:27016879-27016898 | MS.gene45598:CDS | 60.0% | |
TCGCTTCCTGCCATTGCCCT+TGG | + | chr3.1:27016877-27016896 | MS.gene45598:CDS | 60.0% | |
TTCCTCGTCCACTTCCGGCA+TGG | - | chr3.1:27014178-27014197 | None:intergenic | 60.0% | |
! | CCTTTTCGAAGGAGGGGGAG+TGG | - | chr3.1:27013482-27013501 | None:intergenic | 60.0% |
! | CTACAGCAGTGGCACCGAGA+AGG | - | chr3.1:27014966-27014985 | None:intergenic | 60.0% |
! | CTGCAGGTAGGTTGGACGCA+CGG | + | chr3.1:27012401-27012420 | MS.gene45598:intron | 60.0% |
CTAGCCATGACGGCCTAGGG+AGG | - | chr3.1:27016291-27016310 | None:intergenic | 65.0% | |
CTCTCCTCCCTAGGCCGTCA+TGG | + | chr3.1:27016284-27016303 | MS.gene45598:intron | 65.0% | |
GCACAGCGAGCGCCATCTGT+AGG | - | chr3.1:27017932-27017951 | None:intergenic | 65.0% | |
GCTGGGGTAGCTTATGGCCG+TGG | + | chr3.1:27013955-27013974 | MS.gene45598:CDS | 65.0% | |
TGACGGCCTAGGGAGGAGAG+AGG | - | chr3.1:27016284-27016303 | None:intergenic | 65.0% | |
TGCCATGCCGGAAGTGGACG+AGG | + | chr3.1:27014173-27014192 | MS.gene45598:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 27011619 | 27018244 | 27011619 | ID=MS.gene45598 |
chr3.1 | mRNA | 27011619 | 27018244 | 27011619 | ID=MS.gene45598.t1;Parent=MS.gene45598 |
chr3.1 | exon | 27011619 | 27012008 | 27011619 | ID=MS.gene45598.t1.exon1;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27011619 | 27012008 | 27011619 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27013019 | 27014346 | 27013019 | ID=MS.gene45598.t1.exon2;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27013019 | 27014346 | 27013019 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27014524 | 27014634 | 27014524 | ID=MS.gene45598.t1.exon3;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27014524 | 27014634 | 27014524 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27014729 | 27015005 | 27014729 | ID=MS.gene45598.t1.exon4;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27014729 | 27015005 | 27014729 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27015099 | 27015187 | 27015099 | ID=MS.gene45598.t1.exon5;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27015099 | 27015187 | 27015099 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27015284 | 27015395 | 27015284 | ID=MS.gene45598.t1.exon6;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27015284 | 27015395 | 27015284 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27015539 | 27015751 | 27015539 | ID=MS.gene45598.t1.exon7;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27015539 | 27015751 | 27015539 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27016060 | 27016185 | 27016060 | ID=MS.gene45598.t1.exon8;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27016060 | 27016185 | 27016060 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27016297 | 27016395 | 27016297 | ID=MS.gene45598.t1.exon9;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27016297 | 27016395 | 27016297 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27016748 | 27016939 | 27016748 | ID=MS.gene45598.t1.exon10;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27016748 | 27016939 | 27016748 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
chr3.1 | exon | 27017717 | 27018244 | 27017717 | ID=MS.gene45598.t1.exon11;Parent=MS.gene45598.t1 |
chr3.1 | CDS | 27017717 | 27018244 | 27017717 | ID=cds.MS.gene45598.t1;Parent=MS.gene45598.t1 |
Gene Sequence |
Protein sequence |