AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060697


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060697.t1 MTR_2g078760 98.587 283 4 0 1 283 51 333 0.0 571
MS.gene060697.t1 MTR_2g078760 98.425 254 4 0 30 283 1 254 0.0 512
MS.gene060697.t1 MTR_2g078760 99.163 239 2 0 1 239 51 289 3.02e-176 488
MS.gene060697.t1 MTR_8g463130 79.505 283 57 1 1 283 1 282 4.39e-164 456
MS.gene060697.t1 MTR_8g463130 79.921 254 51 0 30 283 1 254 5.18e-149 417
MS.gene060697.t1 MTR_2g078760 98.413 189 3 0 1 189 51 239 1.49e-136 386
MS.gene060697.t1 MTR_4g094208 62.547 267 99 1 17 283 12 277 1.52e-117 338
MS.gene060697.t1 MTR_2g008850 61.423 267 102 1 17 283 16 281 1.01e-113 329
MS.gene060697.t1 MTR_3g074610 60.902 266 103 1 19 283 17 282 3.44e-113 328
MS.gene060697.t1 MTR_5g063940 61.132 265 102 1 19 283 19 282 1.61e-111 323
MS.gene060697.t1 MTR_4g094542 56.115 278 114 2 3 280 93 362 2.08e-108 318
MS.gene060697.t1 MTR_2g008850 63.830 235 85 0 49 283 1 235 7.28e-107 310
MS.gene060697.t1 MTR_5g063940 62.979 235 87 0 49 283 1 235 7.60e-104 302
MS.gene060697.t1 MTR_4g094208 62.573 171 63 1 17 187 12 181 1.08e-69 214
MS.gene060697.t1 MTR_1g014640 44.528 265 139 6 21 282 64 323 1.74e-65 208
MS.gene060697.t1 MTR_1g013400 44.528 265 139 6 21 282 64 323 1.74e-65 208
MS.gene060697.t1 MTR_1g115570 42.857 266 139 7 23 282 79 337 1.45e-64 206
MS.gene060697.t1 MTR_3g105730 43.396 265 142 6 21 282 21 280 3.18e-63 201
MS.gene060697.t1 MTR_3g105730 45.148 237 124 4 49 282 25 258 2.23e-62 198
MS.gene060697.t1 MTR_3g091060 42.424 264 144 6 23 283 83 341 8.57e-56 184
MS.gene060697.t1 MTR_5g071550 39.147 258 141 8 36 283 124 375 5.34e-43 151
MS.gene060697.t1 MTR_3g464650 40.154 259 137 9 37 283 63 315 3.12e-42 147
MS.gene060697.t1 MTR_3g464700 42.130 216 115 6 37 247 87 297 9.81e-38 136
MS.gene060697.t1 MTR_1g075730 34.630 257 136 8 34 282 41 273 1.25e-37 134
MS.gene060697.t1 MTR_1g075730 34.630 257 140 8 34 282 41 277 2.32e-37 134
MS.gene060697.t1 MTR_5g024340 34.746 236 135 7 58 280 114 343 1.23e-34 129
MS.gene060697.t1 MTR_1g050520 35.606 264 152 8 34 283 386 645 1.51e-33 129
MS.gene060697.t1 MTR_4g116420 32.210 267 150 9 41 283 92 351 3.64e-33 125
MS.gene060697.t1 MTR_3g107880 34.241 257 142 9 49 283 37 288 3.71e-33 124
MS.gene060697.t1 MTR_1g041475 37.109 256 131 6 34 282 41 273 3.98e-33 122
MS.gene060697.t1 MTR_5g071550 39.320 206 115 6 36 237 124 323 1.32e-32 123
MS.gene060697.t1 MTR_3g107880 34.241 257 142 9 49 283 94 345 1.52e-32 123
MS.gene060697.t1 MTR_3g107880 34.241 257 142 9 49 283 95 346 1.58e-32 123
MS.gene060697.t1 MTR_4g125810 35.636 275 129 9 49 283 238 504 8.01e-32 123
MS.gene060697.t1 MTR_3g104710 33.582 268 132 7 58 283 277 540 3.92e-31 122
MS.gene060697.t1 MTR_3g068200 32.890 301 158 9 23 283 80 376 6.77e-31 119
MS.gene060697.t1 MTR_4g123080 30.385 260 151 8 47 282 73 326 1.56e-30 117
MS.gene060697.t1 MTR_4g123080 30.385 260 151 8 47 282 91 344 2.59e-30 117
MS.gene060697.t1 MTR_1g086350 33.193 238 131 9 67 282 16 247 2.71e-30 115
MS.gene060697.t1 MTR_2g033000 31.092 238 136 7 67 282 100 331 8.38e-30 115
MS.gene060697.t1 MTR_1g086350 33.054 239 132 9 66 282 101 333 2.11e-29 115
MS.gene060697.t1 MTR_1g086350 33.054 239 132 9 66 282 117 349 2.34e-29 115
MS.gene060697.t1 MTR_5g009370 32.281 285 152 9 35 283 52 331 2.47e-29 114
MS.gene060697.t1 MTR_8g102550 32.780 241 135 6 67 283 152 389 1.59e-28 112
MS.gene060697.t1 MTR_1g015110 32.143 308 144 10 37 283 241 544 3.88e-28 113
MS.gene060697.t1 MTR_6g081850 31.835 267 144 10 47 280 55 316 9.23e-28 109
MS.gene060697.t1 MTR_3g105730 38.788 165 95 5 21 182 21 182 9.25e-28 107
MS.gene060697.t1 MTR_2g040500 33.028 327 143 13 29 283 214 536 3.01e-27 110
MS.gene060697.t1 MTR_5g080680 33.948 271 150 9 36 282 102 367 1.19e-26 107
MS.gene060697.t1 MTR_4g118340 29.496 278 151 10 48 283 67 341 2.78e-26 106
MS.gene060697.t1 MTR_1g083690 35.878 262 118 12 67 280 89 348 4.27e-26 105
MS.gene060697.t1 MTR_7g090550 28.902 346 164 13 9 282 15 350 1.36e-25 105
MS.gene060697.t1 MTR_1g028300 34.866 261 141 8 48 283 124 380 3.60e-25 103
MS.gene060697.t1 MTR_7g100240 30.216 278 129 9 67 282 71 345 4.32e-25 103
MS.gene060697.t1 MTR_7g112490 32.727 275 128 12 64 282 106 379 7.95e-25 102
MS.gene060697.t1 MTR_7g112490 33.091 275 127 13 64 282 88 361 8.95e-25 102
MS.gene060697.t1 MTR_4g007440 44.776 134 57 4 127 249 160 287 2.31e-24 100
MS.gene060697.t1 MTR_3g491830 28.819 288 144 10 47 282 71 349 2.71e-24 101
MS.gene060697.t1 MTR_1g067210 28.840 319 158 13 30 282 35 350 5.51e-23 97.4
MS.gene060697.t1 MTR_1g112840 27.660 329 145 13 32 282 42 355 7.71e-23 97.1
MS.gene060697.t1 MTR_1g019760 29.707 239 144 9 63 282 61 294 1.84e-22 96.3
MS.gene060697.t1 MTR_1g019760 29.707 239 144 9 63 282 61 294 2.42e-22 96.3
MS.gene060697.t1 MTR_7g021530 38.743 191 92 9 99 267 108 295 3.55e-22 95.1
MS.gene060697.t1 MTR_7g021530 38.743 191 92 9 99 267 158 345 1.30e-21 94.0
MS.gene060697.t1 MTR_2g435550 34.340 265 118 16 67 280 78 337 1.33e-21 93.2
MS.gene060697.t1 MTR_2g435550 34.340 265 118 16 67 280 92 351 1.44e-21 93.2
MS.gene060697.t1 MTR_7g021530 38.743 191 92 9 99 267 199 386 1.62e-21 94.0
MS.gene060697.t1 MTR_7g112430 31.518 257 147 11 50 282 46 297 2.18e-21 93.6
MS.gene060697.t1 MTR_3g105880 31.638 177 95 5 127 283 160 330 2.37e-21 92.8
MS.gene060697.t1 MTR_4g013295 39.444 180 85 8 126 282 165 343 2.85e-21 92.4
MS.gene060697.t1 MTR_7g029240 35.417 240 129 12 65 282 66 301 3.85e-21 92.8
MS.gene060697.t1 MTR_8g074930 30.241 291 127 13 60 282 71 353 4.63e-21 92.0
MS.gene060697.t1 MTR_7g090530 29.329 283 125 10 67 280 69 345 5.65e-21 92.4
MS.gene060697.t1 MTR_3g105880 38.060 134 66 4 127 249 160 287 1.03e-20 90.1
MS.gene060697.t1 MTR_2g435550 34.836 244 110 14 67 266 92 330 1.60e-20 90.5
MS.gene060697.t1 MTR_4g120410 38.547 179 86 9 125 280 173 350 2.22e-20 90.1
MS.gene060697.t1 MTR_3g032700 29.096 354 155 15 7 282 11 346 2.94e-20 90.1
MS.gene060697.t1 MTR_1g110210 28.125 256 157 8 50 282 46 297 3.30e-20 89.0
MS.gene060697.t1 MTR_6g087000 29.344 259 139 11 67 282 124 381 7.42e-20 89.7
MS.gene060697.t1 MTR_3g101540 28.936 235 143 9 67 282 66 295 9.54e-20 88.6
MS.gene060697.t1 MTR_3g101540 28.936 235 143 9 67 282 66 295 9.76e-20 88.6
MS.gene060697.t1 MTR_6g087000 29.344 259 139 11 67 282 124 381 1.07e-19 89.4
MS.gene060697.t1 MTR_3g032660 28.814 354 156 15 7 282 11 346 1.12e-19 88.6
MS.gene060697.t1 MTR_1g116260 29.514 288 133 10 60 282 72 354 1.18e-19 88.2
MS.gene060697.t1 MTR_7g080170 37.640 178 93 7 107 267 78 254 1.24e-19 88.2
MS.gene060697.t1 MTR_2g020970 27.000 300 170 12 31 283 45 342 1.54e-19 87.4
MS.gene060697.t1 MTR_7g080170 35.500 200 104 8 107 282 186 384 1.62e-19 88.6
MS.gene060697.t1 MTR_2g020970 27.000 300 170 12 31 283 45 342 2.46e-19 87.8
MS.gene060697.t1 MTR_7g081020 28.571 280 127 12 67 280 76 348 2.55e-19 87.0
MS.gene060697.t1 MTR_7g070510 39.744 156 78 6 127 267 188 342 2.67e-19 87.4
MS.gene060697.t1 MTR_8g017240 38.636 176 84 8 127 280 164 337 4.81e-19 86.3
MS.gene060697.t1 MTR_1g083750 29.961 257 151 11 50 282 46 297 6.13e-19 86.3
MS.gene060697.t1 MTR_1g014190 32.203 177 94 6 127 283 198 368 1.19e-18 85.5
MS.gene060697.t1 MTR_1g014190 32.203 177 94 6 127 283 160 330 1.46e-18 84.7
MS.gene060697.t1 MTR_7g081020 29.075 227 112 9 69 251 78 299 3.63e-18 83.2
MS.gene060697.t1 MTR_2g033910 29.268 287 138 12 59 282 66 350 1.94e-17 81.6
MS.gene060697.t1 MTR_4g113480 29.213 267 140 11 49 276 60 316 3.61e-17 81.6
MS.gene060697.t1 MTR_1g106855 27.857 280 129 10 70 282 64 337 2.03e-16 79.0
MS.gene060697.t1 MTR_4g037470 34.637 179 93 7 127 282 202 379 3.59e-16 78.6
MS.gene060697.t1 MTR_8g074930 30.328 244 102 10 102 282 3 241 3.84e-16 77.0
MS.gene060697.t1 MTR_4g037470 34.637 179 93 7 127 282 193 370 5.43e-16 77.8
MS.gene060697.t1 MTR_5g071550 37.143 140 81 4 36 173 124 258 5.82e-16 76.6
MS.gene060697.t1 MTR_2g090190 36.313 179 90 7 127 282 186 363 2.67e-15 75.9
MS.gene060697.t1 MTR_0015s0140 25.000 316 161 11 30 280 46 350 3.85e-15 75.1
MS.gene060697.t1 MTR_1g083750 33.708 178 102 7 117 282 32 205 5.32e-15 74.3
MS.gene060697.t1 MTR_7g060770 25.926 297 142 11 60 283 256 547 6.30e-15 75.1
MS.gene060697.t1 MTR_1g016620 30.500 200 99 9 69 244 100 283 8.88e-15 73.9
MS.gene060697.t1 MTR_1g106855 27.556 225 114 7 70 249 64 284 1.70e-14 72.4
MS.gene060697.t1 MTR_3g032590 32.301 226 75 10 123 282 139 352 1.24e-13 70.9
MS.gene060697.t1 MTR_4g119830 26.686 341 132 13 56 282 151 487 4.61e-13 69.3
MS.gene060697.t1 MTR_4g123080 34.426 122 65 3 171 282 115 231 4.78e-13 68.2
MS.gene060697.t1 MTR_0015s0140 29.524 210 86 8 127 280 93 296 1.83e-12 67.0
MS.gene060697.t1 MTR_1g071370 27.315 216 96 9 127 283 226 439 5.14e-12 66.6
MS.gene060697.t1 MTR_5g080680 32.086 187 104 7 36 204 102 283 1.43e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060697.t1 AT3G15260 74.048 289 69 2 1 283 1 289 2.28e-156 437
MS.gene060697.t1 AT3G15260 74.048 289 69 2 1 283 1 289 2.28e-156 437
MS.gene060697.t1 AT4G28400 68.198 283 90 0 1 283 1 283 1.41e-140 397
MS.gene060697.t1 AT2G20630 65.018 283 95 1 1 283 1 279 9.97e-135 382
MS.gene060697.t1 AT2G20630 65.233 279 93 1 1 279 1 275 1.69e-132 377
MS.gene060697.t1 AT4G28400 69.231 260 80 0 24 283 2 261 8.47e-132 374
MS.gene060697.t1 AT4G28400 67.782 239 77 0 1 239 1 239 1.11e-118 340
MS.gene060697.t1 AT1G22280 59.200 250 102 0 34 283 32 281 4.64e-107 312
MS.gene060697.t1 AT1G34750 56.890 283 112 2 10 283 1 282 1.82e-106 311
MS.gene060697.t1 AT1G34750 56.890 283 112 2 10 283 1 282 1.82e-106 311
MS.gene060697.t1 AT1G34750 56.890 283 112 2 10 283 1 282 1.82e-106 311
MS.gene060697.t1 AT1G22280 57.812 256 102 1 34 283 32 287 1.32e-104 306
MS.gene060697.t1 AT2G34740 56.522 253 106 3 32 282 84 334 6.07e-97 288
MS.gene060697.t1 AT1G78200 55.094 265 115 3 22 283 20 283 2.10e-95 283
MS.gene060697.t1 AT1G78200 55.094 265 115 3 22 283 20 283 2.10e-95 283
MS.gene060697.t1 AT1G78200 55.094 265 115 3 22 283 20 283 2.10e-95 283
MS.gene060697.t1 AT1G34750 55.466 247 98 3 10 247 1 244 7.66e-88 262
MS.gene060697.t1 AT1G78200 56.303 238 101 2 49 283 1 238 9.60e-88 261
MS.gene060697.t1 AT1G78200 56.303 238 101 2 49 283 1 238 9.60e-88 261
MS.gene060697.t1 AT2G34740 58.095 210 84 3 36 243 84 291 3.21e-84 255
MS.gene060697.t1 AT2G34740 58.095 210 84 3 36 243 102 309 3.77e-84 255
MS.gene060697.t1 AT5G10740 44.151 265 140 6 21 282 20 279 2.52e-65 208
MS.gene060697.t1 AT5G10740 44.151 265 140 6 21 282 20 279 2.52e-65 208
MS.gene060697.t1 AT5G24940 43.774 265 141 6 21 282 20 279 1.68e-64 209
MS.gene060697.t1 AT1G22280 61.688 154 59 0 34 187 32 185 1.93e-64 201
MS.gene060697.t1 AT4G31750 43.019 265 143 6 21 282 20 279 6.45e-64 203
MS.gene060697.t1 AT4G31750 43.019 265 143 6 21 282 20 279 8.92e-64 203
MS.gene060697.t1 AT4G31750 43.019 265 143 6 21 282 20 279 8.92e-64 203
MS.gene060697.t1 AT1G43900 41.241 274 146 8 20 283 101 369 1.74e-60 196
MS.gene060697.t1 AT5G53140 40.316 253 144 5 34 283 100 348 1.71e-53 179
MS.gene060697.t1 AT5G53140 40.316 253 144 5 34 283 100 348 1.71e-53 179
MS.gene060697.t1 AT2G30020 42.205 263 128 10 37 283 139 393 5.57e-46 159
MS.gene060697.t1 AT1G07160 38.298 282 149 9 18 282 103 376 1.27e-44 155
MS.gene060697.t1 AT2G40180 36.364 264 146 8 36 283 129 386 1.04e-40 145
MS.gene060697.t1 AT1G67820 39.336 211 118 6 60 265 108 313 8.02e-36 132
MS.gene060697.t1 AT1G67820 39.336 211 118 6 60 265 144 349 2.15e-35 132
MS.gene060697.t1 AT2G25620 36.735 245 125 10 62 283 120 357 2.42e-35 131
MS.gene060697.t1 AT2G25620 36.735 245 125 10 62 283 120 357 2.42e-35 131
MS.gene060697.t1 AT3G51470 33.628 226 132 6 67 280 62 281 2.79e-34 126
MS.gene060697.t1 AT3G51470 33.480 227 133 6 66 280 105 325 9.22e-34 126
MS.gene060697.t1 AT2G33700 35.470 234 132 7 60 280 115 342 1.56e-33 126
MS.gene060697.t1 AT3G23360 31.225 253 140 6 34 282 37 259 6.63e-32 119
MS.gene060697.t1 AT1G48040 34.310 239 127 8 66 280 115 347 2.31e-31 120
MS.gene060697.t1 AT3G16800 42.654 211 90 11 96 280 46 251 4.28e-31 117
MS.gene060697.t1 AT3G16800 42.654 211 90 11 96 280 46 251 4.28e-31 117
MS.gene060697.t1 AT3G17250 32.231 242 132 8 65 280 156 391 1.65e-30 118
MS.gene060697.t1 AT5G57050 34.098 305 139 14 36 283 73 372 1.81e-30 118
MS.gene060697.t1 AT3G16800 37.121 264 116 14 62 280 88 346 2.57e-30 117
MS.gene060697.t1 AT3G16800 37.121 264 116 14 62 280 88 346 2.57e-30 117
MS.gene060697.t1 AT3G16800 37.121 264 116 14 62 280 88 346 2.57e-30 117
MS.gene060697.t1 AT5G57050 34.098 305 139 14 36 283 113 412 2.80e-30 118
MS.gene060697.t1 AT4G08260 34.286 245 115 10 49 283 1 209 2.82e-30 113
MS.gene060697.t1 AT4G26080 34.768 302 136 14 36 283 129 423 3.62e-30 118
MS.gene060697.t1 AT2G29380 34.256 289 144 13 36 283 78 361 3.78e-30 116
MS.gene060697.t1 AT3G62260 33.333 237 131 8 66 280 26 257 1.19e-29 114
MS.gene060697.t1 AT3G62260 32.780 241 127 8 66 280 115 346 7.96e-29 113
MS.gene060697.t1 AT3G62260 32.780 241 127 8 66 280 116 347 8.15e-29 113
MS.gene060697.t1 AT1G72770 35.448 268 119 7 67 283 238 502 1.35e-28 114
MS.gene060697.t1 AT1G72770 35.448 268 119 7 67 283 238 502 1.35e-28 114
MS.gene060697.t1 AT1G72770 35.448 268 119 7 67 283 238 502 1.35e-28 114
MS.gene060697.t1 AT3G11410 36.134 238 120 9 37 246 106 339 1.27e-27 110
MS.gene060697.t1 AT1G07430 33.054 239 132 7 36 250 121 355 2.35e-27 110
MS.gene060697.t1 AT2G40860 31.559 263 163 7 34 283 293 551 2.46e-27 111
MS.gene060697.t1 AT2G40860 31.559 263 163 7 34 283 391 649 3.47e-27 111
MS.gene060697.t1 AT5G51760 32.143 308 145 11 36 283 79 382 1.40e-26 107
MS.gene060697.t1 AT5G51760 32.792 308 143 12 36 283 109 412 2.23e-26 107
MS.gene060697.t1 AT5G27930 35.496 262 120 12 67 280 92 352 1.50e-25 104
MS.gene060697.t1 AT5G27930 35.496 262 120 12 67 280 92 352 1.50e-25 104
MS.gene060697.t1 AT5G59220 33.891 239 127 8 36 250 112 343 1.64e-25 104
MS.gene060697.t1 AT1G17550 29.808 312 159 9 26 283 197 502 2.89e-25 105
MS.gene060697.t1 AT1G17550 29.808 312 159 9 26 283 197 502 2.89e-25 105
MS.gene060697.t1 AT1G18030 31.227 269 147 9 45 280 83 346 7.03e-25 102
MS.gene060697.t1 AT1G09160 31.128 257 148 10 50 282 46 297 2.52e-24 101
MS.gene060697.t1 AT1G09160 31.128 257 148 10 50 282 46 297 2.52e-24 101
MS.gene060697.t1 AT3G05640 36.576 257 112 14 70 280 96 347 3.61e-24 100
MS.gene060697.t1 AT3G05640 36.576 257 112 14 70 280 96 347 3.61e-24 100
MS.gene060697.t1 AT3G05640 36.576 257 112 14 70 280 96 347 3.61e-24 100
MS.gene060697.t1 AT3G27140 32.653 245 99 8 49 283 1 189 9.88e-24 97.1
MS.gene060697.t1 AT4G27800 29.568 301 150 11 34 282 58 348 4.56e-23 97.8
MS.gene060697.t1 AT1G47380 29.545 264 153 10 38 282 44 293 6.63e-23 97.8
MS.gene060697.t1 AT2G40860 30.000 250 158 7 34 270 391 636 7.27e-23 98.6
MS.gene060697.t1 AT3G51370 30.208 288 131 12 60 282 71 353 1.76e-22 95.9
MS.gene060697.t1 AT3G51370 30.208 288 131 12 60 282 71 353 1.76e-22 95.9
MS.gene060697.t1 AT5G66080 31.408 277 121 11 70 282 85 356 2.46e-22 95.9
MS.gene060697.t1 AT4G38520 28.125 320 151 11 32 280 42 353 3.12e-22 95.5
MS.gene060697.t1 AT4G38520 28.125 320 151 11 32 280 42 353 3.12e-22 95.5
MS.gene060697.t1 AT3G12620 31.655 278 119 11 70 282 86 357 3.89e-22 95.1
MS.gene060697.t1 AT3G12620 31.655 278 119 11 70 282 86 357 3.89e-22 95.1
MS.gene060697.t1 AT4G31860 35.593 177 88 6 127 283 160 330 4.08e-22 94.7
MS.gene060697.t1 AT2G25070 32.203 177 94 5 127 283 160 330 6.38e-22 94.4
MS.gene060697.t1 AT2G25070 32.203 177 94 5 127 283 160 330 6.38e-22 94.4
MS.gene060697.t1 AT1G68410 28.674 279 167 11 28 282 32 302 9.98e-22 94.4
MS.gene060697.t1 AT1G68410 28.674 279 167 11 28 282 32 302 9.98e-22 94.4
MS.gene060697.t1 AT1G68410 28.674 279 167 11 28 282 32 302 9.98e-22 94.4
MS.gene060697.t1 AT1G68410 28.674 279 167 11 28 282 32 302 9.98e-22 94.4
MS.gene060697.t1 AT3G55050 29.874 318 150 10 33 282 46 358 1.38e-21 93.6
MS.gene060697.t1 AT3G55050 29.874 318 150 10 33 282 46 358 1.38e-21 93.6
MS.gene060697.t1 AT4G31860 40.299 134 63 4 127 249 160 287 4.27e-21 90.9
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 111 290 5.83e-21 92.0
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 111 290 5.83e-21 92.0
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 111 290 5.83e-21 92.0
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 111 290 5.83e-21 92.0
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 151 330 6.18e-21 92.4
MS.gene060697.t1 AT1G79630 37.017 181 90 7 126 283 151 330 6.18e-21 92.4
MS.gene060697.t1 AT1G18030 33.032 221 115 7 47 239 85 300 9.59e-21 90.1
MS.gene060697.t1 AT5G02760 30.142 282 122 12 67 282 72 344 9.62e-21 91.3
MS.gene060697.t1 AT1G79630 37.222 180 89 7 127 283 218 396 1.01e-20 92.0
MS.gene060697.t1 AT1G79630 37.222 180 89 7 127 283 222 400 1.05e-20 92.0
MS.gene060697.t1 AT5G01700 31.923 260 101 9 46 282 82 288 1.74e-20 89.7
MS.gene060697.t1 AT2G20050 29.008 262 142 10 61 282 140 397 2.89e-20 91.3
MS.gene060697.t1 AT2G20050 29.008 262 142 10 61 282 140 397 3.06e-20 90.9
MS.gene060697.t1 AT5G01700 31.801 261 102 9 46 283 131 338 4.99e-20 89.4
MS.gene060697.t1 AT5G06750 30.522 249 114 11 70 268 85 324 1.22e-19 88.2
MS.gene060697.t1 AT5G06750 30.522 249 114 11 70 268 85 324 1.22e-19 88.2
MS.gene060697.t1 AT3G02750 35.714 196 108 7 89 267 177 371 3.13e-19 87.4
MS.gene060697.t1 AT3G02750 35.714 196 108 7 89 267 177 371 3.13e-19 87.4
MS.gene060697.t1 AT4G32950 32.296 257 127 12 64 282 69 316 3.75e-19 86.3
MS.gene060697.t1 AT1G16220 34.054 185 88 7 127 283 199 377 4.69e-19 87.0
MS.gene060697.t1 AT3G17090 27.875 287 141 9 59 282 75 358 9.43e-19 85.5
MS.gene060697.t1 AT4G27800 30.451 266 127 11 34 251 58 313 2.14e-18 84.0
MS.gene060697.t1 AT5G66080 32.645 242 99 9 102 282 14 252 2.31e-18 83.2
MS.gene060697.t1 AT4G27800 30.451 266 127 11 34 251 58 313 2.40e-18 84.0
MS.gene060697.t1 AT5G36250 33.488 215 118 8 92 282 171 384 2.57e-18 84.7
MS.gene060697.t1 AT3G51370 30.165 242 105 9 102 282 30 268 5.73e-18 82.4
MS.gene060697.t1 AT2G05050 40.171 117 62 3 173 283 76 190 5.83e-18 80.5
MS.gene060697.t1 AT4G03415 43.165 139 62 6 127 249 195 332 5.86e-18 84.0
MS.gene060697.t1 AT4G03415 43.165 139 62 6 127 249 195 332 5.86e-18 84.0
MS.gene060697.t1 AT4G03415 43.165 139 62 6 127 249 195 332 5.86e-18 84.0
MS.gene060697.t1 AT4G31860 40.164 122 56 4 127 237 160 275 1.53e-17 80.9
MS.gene060697.t1 AT4G33920 29.181 281 125 11 70 282 64 338 1.65e-16 79.0
MS.gene060697.t1 AT5G26010 31.496 254 136 10 67 283 73 325 2.55e-16 78.2
MS.gene060697.t1 AT5G36250 31.441 229 118 9 92 282 171 398 4.35e-15 75.5
MS.gene060697.t1 AT5G06750 34.066 182 73 8 127 268 68 242 8.55e-15 73.6
MS.gene060697.t1 AT1G03590 39.568 139 67 6 127 249 185 322 1.05e-14 74.3
MS.gene060697.t1 AT3G16560 30.909 220 93 8 117 282 266 480 2.72e-13 70.1
MS.gene060697.t1 AT3G16560 30.909 220 93 8 117 282 266 480 2.72e-13 70.1
MS.gene060697.t1 AT3G16560 30.909 220 93 8 117 282 266 480 2.72e-13 70.1
MS.gene060697.t1 AT5G36250 34.706 170 93 7 92 244 171 339 5.22e-13 68.6
MS.gene060697.t1 AT4G33920 29.388 245 106 9 102 282 14 255 7.49e-13 67.8
MS.gene060697.t1 AT4G33920 31.863 204 80 7 136 282 24 225 1.34e-12 66.6
MS.gene060697.t1 AT3G16560 32.804 189 89 7 117 272 266 449 1.65e-12 67.8
MS.gene060697.t1 AT5G19280 25.869 259 159 10 49 280 323 575 2.13e-12 67.4
MS.gene060697.t1 AT1G72770 34.731 167 76 5 67 203 238 401 4.61e-12 66.2
MS.gene060697.t1 AT1G72770 34.731 167 76 5 67 203 238 401 4.61e-12 66.2
MS.gene060697.t1 AT4G32950 33.010 206 98 11 64 238 69 265 7.17e-12 64.7
MS.gene060697.t1 AT5G59220 31.250 192 101 8 36 203 112 296 1.45e-11 64.3
MS.gene060697.t1 AT5G19280 25.279 269 158 11 49 280 323 585 2.17e-11 64.3
MS.gene060697.t1 AT2G40860 27.273 209 136 6 34 230 391 595 6.20e-11 63.2

Find 66 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCCTTTCCCTGAATC+AGG 0.135034 2.1:+21714651 None:intergenic
CAAATTGATAACCATGAATT+AGG 0.239726 2.1:-21714537 MS.gene060697:CDS
GGTTTATCAGACCCTGATTC+AGG 0.253231 2.1:-21714663 MS.gene060697:CDS
TTCCCATGTAGCCTGACTTC+TGG 0.289949 2.1:-21714261 MS.gene060697:intron
TTTAGAGAAGTCAGGTGAAT+TGG 0.311226 2.1:-21714185 MS.gene060697:CDS
ATATCCTCATGTTCTGTGTT+TGG 0.317522 2.1:+21714031 None:intergenic
GCTTCCTTGACAGCATTTAC+AGG 0.350045 2.1:+21714232 None:intergenic
GGCTTGTTTGCAATATTTGA+TGG 0.354328 2.1:-21714516 MS.gene060697:CDS
TTGGCAGTGTCGAGGGCATT+TGG 0.369814 2.1:-21713760 MS.gene060697:CDS
AGCCCGAGAATCCCCGATAT+TGG 0.376877 2.1:+21714102 None:intergenic
TTGCAAACAAGCCTAATTCA+TGG 0.382436 2.1:+21714526 None:intergenic
AAGTTAGTAGTAGCCAATAT+CGG 0.387423 2.1:-21714115 MS.gene060697:CDS
CACGGCTTTCACTTGGTAAA+GGG 0.388409 2.1:-21714606 MS.gene060697:CDS
ATGATCCACTGACAGTTGTT+TGG 0.398064 2.1:+21714057 None:intergenic
TTGCAGGAGAAAGTTGGATT+TGG 0.399250 2.1:-21714684 MS.gene060697:intron
TAGCCAATATCGGGGATTCT+CGG 0.408867 2.1:-21714105 MS.gene060697:CDS
TCACTGAAGAAGCAGTTAAC+AGG 0.409429 2.1:-21713418 MS.gene060697:CDS
AAATGAGACTGCAAGTAGTT+AGG 0.414154 2.1:+21714474 None:intergenic
TTAGAGAAGTCAGGTGAATT+GGG 0.420684 2.1:-21714184 MS.gene060697:CDS
AGTTAGTAGTAGCCAATATC+GGG 0.425576 2.1:-21714114 MS.gene060697:CDS
ACAGGTTCTGTCCAGAAGTC+AGG 0.428823 2.1:+21714250 None:intergenic
TGATTGTATCAAAGATATAA+AGG 0.438060 2.1:-21713465 MS.gene060697:CDS
GGGAAGATCATATCATGAAA+TGG 0.442666 2.1:-21714586 MS.gene060697:CDS
GTTTGATAATATCTTAAAAG+AGG 0.444827 2.1:-21714451 MS.gene060697:intron
AGTCAGGTGAATTGGGAAGA+GGG 0.450651 2.1:-21714177 MS.gene060697:CDS
GGGGACGTTCCACGAGTTGA+TGG 0.455936 2.1:-21713787 MS.gene060697:CDS
CTTCTCTAAAATACTAGAAT+CGG 0.465360 2.1:+21714198 None:intergenic
AGCCAATATCGGGGATTCTC+GGG 0.474017 2.1:-21714104 MS.gene060697:CDS
TCTTTCCTTTCCCTGAATCA+GGG 0.475011 2.1:+21714652 None:intergenic
TCACGGCTTTCACTTGGTAA+AGG 0.477649 2.1:-21714607 MS.gene060697:CDS
GTTACCGCGATATTGATTGA+TGG 0.478710 2.1:-21714142 MS.gene060697:CDS
AAGTCAGGTGAATTGGGAAG+AGG 0.482949 2.1:-21714178 MS.gene060697:CDS
GAAAAGCAGCGACGATATCT+CGG 0.486004 2.1:-21713396 MS.gene060697:CDS
GCAATATTTGATGGCCATGC+TGG 0.487035 2.1:-21714507 MS.gene060697:CDS
TGTTGGTTGCAGGAGAAAGT+TGG 0.488727 2.1:-21714690 MS.gene060697:intron
TCAGACCCTGATTCAGGGAA+AGG 0.503717 2.1:-21714657 MS.gene060697:CDS
CAAAGATATAAAGGATGCTC+GGG 0.504451 2.1:-21713456 MS.gene060697:CDS
TTTGTTATATTAGCCAGTGA+TGG 0.505428 2.1:-21713664 MS.gene060697:CDS
GTTTATCAGACCCTGATTCA+GGG 0.507975 2.1:-21714662 MS.gene060697:CDS
CATAACTCACGGCTTTCACT+TGG 0.508216 2.1:-21714613 MS.gene060697:CDS
GTCAGGTGAATTGGGAAGAG+GGG 0.512339 2.1:-21714176 MS.gene060697:CDS
TATTAGCCAGTGATGGATTG+TGG 0.530644 2.1:-21713657 MS.gene060697:CDS
CGGGCTGTCTTATCAAAGAA+AGG 0.532439 2.1:-21714085 MS.gene060697:CDS
TCAAAGATATAAAGGATGCT+CGG 0.536981 2.1:-21713457 MS.gene060697:CDS
GACCTTCCACAATCCATCAC+TGG 0.559151 2.1:+21713651 None:intergenic
TATATCTTTGATACAATCAA+CGG 0.560301 2.1:+21713469 None:intergenic
ATGGACGGTTGGCAGTGTCG+AGG 0.565843 2.1:-21713768 MS.gene060697:CDS
TGGACGGTTGGCAGTGTCGA+GGG 0.566300 2.1:-21713767 MS.gene060697:CDS
AGATATTCTTCATAAGATGA+AGG 0.569831 2.1:-21716178 MS.gene060697:intron
AGAACCTGTAAATGCTGTCA+AGG 0.580802 2.1:-21714236 MS.gene060697:CDS
TCCACGAGTTGATGGACGGT+TGG 0.595972 2.1:-21713779 MS.gene060697:CDS
AGATATAAAGGATGCTCGGG+CGG 0.605795 2.1:-21713453 MS.gene060697:CDS
ATCTTCTCTACTGTCACATG+TGG 0.609752 2.1:+21713703 None:intergenic
AGCCAGTGATGGATTGTGGA+AGG 0.612846 2.1:-21713653 MS.gene060697:intron
TGTGGCCAAACAACTGTCAG+TGG 0.618489 2.1:-21714062 MS.gene060697:CDS
AAGATCATATCATGAAATGG+AGG 0.634765 2.1:-21714583 MS.gene060697:CDS
ACGTTCCACGAGTTGATGGA+CGG 0.635047 2.1:-21713783 MS.gene060697:CDS
TGAACCAAACACAGAACATG+AGG 0.635890 2.1:-21714035 MS.gene060697:CDS
GCCAACCGTCCATCAACTCG+TGG 0.637325 2.1:+21713778 None:intergenic
TGTTAACTGCTTCTTCAGTG+AGG 0.637515 2.1:+21713420 None:intergenic
TCAGGTGAATTGGGAAGAGG+GGG 0.645350 2.1:-21714175 MS.gene060697:CDS
ATGTCGAAACACATAACTCA+CGG 0.646422 2.1:-21714624 MS.gene060697:CDS
TAGGTACATTGTGACCAGCA+TGG 0.661746 2.1:+21714493 None:intergenic
TGTCTTATCAAAGAAAGGTG+TGG 0.685096 2.1:-21714080 MS.gene060697:CDS
CTGACCATCAATCAATATCG+CGG 0.699551 2.1:+21714138 None:intergenic
GTTAGTAGTAGCCAATATCG+GGG 0.703000 2.1:-21714113 MS.gene060697:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACAATTTAACATAATT+TGG + chr2.1:21713720-21713739 None:intergenic 10.0%
!! AATAAAGTATAATGAAATAA+AGG + chr2.1:21713427-21713446 None:intergenic 10.0%
!! ATTAAAAATATATATCCATA+AGG + chr2.1:21715968-21715987 None:intergenic 10.0%
!!! GATATATATTTTTAATACTA+AGG - chr2.1:21715972-21715991 MS.gene060697:intron 10.0%
!! TGAATCAAATTAATGAAAAT+TGG + chr2.1:21713508-21713527 None:intergenic 15.0%
!!! AAGCAAAAAAATAAGTTTTT+AGG - chr2.1:21713846-21713865 MS.gene060697:intron 15.0%
!!! AAGTAAAAACCATTTTTTTT+AGG + chr2.1:21713934-21713953 None:intergenic 15.0%
!!! TATAATGATATGATAATGAT+AGG - chr2.1:21714548-21714567 MS.gene060697:CDS 15.0%
!!! TATTCTATATATTTTTGTGA+CGG - chr2.1:21714833-21714852 MS.gene060697:intron 15.0%
!! AAAAACACACAAAAAACTAA+AGG + chr2.1:21713564-21713583 None:intergenic 20.0%
!! AAAACACACAAAAAACTAAA+GGG + chr2.1:21713563-21713582 None:intergenic 20.0%
!! AAGTATGTATGATCTAATAT+TGG + chr2.1:21713469-21713488 None:intergenic 20.0%
!! AATGAAATAAAGGATCTATA+TGG + chr2.1:21713417-21713436 None:intergenic 20.0%
!! TACTTATAAATGTAACCAAA+GGG - chr2.1:21713949-21713968 MS.gene060697:intron 20.0%
!! TATAAGAAATACCAATTTGA+TGG - chr2.1:21714637-21714656 MS.gene060697:CDS 20.0%
!! TATATCTTTGATACAATCAA+CGG + chr2.1:21716096-21716115 None:intergenic 20.0%
!! TGATTGTATCAAAGATATAA+AGG - chr2.1:21716097-21716116 MS.gene060697:intron 20.0%
!! TGCTAAAGTTATTGTTAATT+TGG - chr2.1:21714342-21714361 MS.gene060697:intron 20.0%
!! TTACTTATAAATGTAACCAA+AGG - chr2.1:21713948-21713967 MS.gene060697:intron 20.0%
!! TTCAATGAACCTAAAAAAAA+TGG - chr2.1:21713922-21713941 MS.gene060697:intron 20.0%
!!! AACTTATTATTATCCTTTTG+TGG - chr2.1:21714096-21714115 MS.gene060697:CDS 20.0%
!!! GTTTGATAATATCTTAAAAG+AGG - chr2.1:21715111-21715130 MS.gene060697:intron 20.0%
!!! TTTTTAATACTAAGGAAGTA+AGG - chr2.1:21715980-21715999 MS.gene060697:intron 20.0%
!!! TTTTTTGTGTGTTTTTCATT+TGG - chr2.1:21713568-21713587 MS.gene060697:intron 20.0%
! AAACACACAAAAAACTAAAG+GGG + chr2.1:21713562-21713581 None:intergenic 25.0%
! AAACTTTAATTAGCTAATGG+AGG + chr2.1:21714756-21714775 None:intergenic 25.0%
! AATATATAGAATACTAAGCG+AGG + chr2.1:21714826-21714845 None:intergenic 25.0%
! ACAAACAAACTAAAATGTTC+TGG + chr2.1:21714400-21714419 None:intergenic 25.0%
! AGAAAAACATTCCATCAAAT+TGG + chr2.1:21714651-21714670 None:intergenic 25.0%
! AGATATTCTTCATAAGATGA+AGG - chr2.1:21713384-21713403 MS.gene060697:CDS 25.0%
! AGGTATGATACACTTTATAA+TGG - chr2.1:21715587-21715606 MS.gene060697:intron 25.0%
! ATATATAGAATACTAAGCGA+GGG + chr2.1:21714825-21714844 None:intergenic 25.0%
! ATTATAAAGTGTATCATACC+TGG + chr2.1:21715588-21715607 None:intergenic 25.0%
! CAATTTAGCAAAATTCTTGA+TGG + chr2.1:21714253-21714272 None:intergenic 25.0%
! CATGAGGATATAAAAAATAG+AGG - chr2.1:21715543-21715562 MS.gene060697:intron 25.0%
! CATTGAATAACGAATGTATT+TGG + chr2.1:21713909-21713928 None:intergenic 25.0%
! GATAATAATAAGTTCGTGTT+TGG + chr2.1:21714090-21714109 None:intergenic 25.0%
! GTTTATTCATATATGATTCC+AGG - chr2.1:21716052-21716071 MS.gene060697:intron 25.0%
! TATGCATGCATATTTAACTA+GGG - chr2.1:21716020-21716039 MS.gene060697:intron 25.0%
! TCAATTAATTCTGATATCGT+TGG + chr2.1:21714432-21714451 None:intergenic 25.0%
! TGCAAACTTTAATTAGCTAA+TGG + chr2.1:21714759-21714778 None:intergenic 25.0%
!! CAAATTGATAACCATGAATT+AGG - chr2.1:21715025-21715044 MS.gene060697:intron 25.0%
!! TATTGTTAATTTGGTGAAGA+GGG - chr2.1:21714351-21714370 MS.gene060697:intron 25.0%
!! TTATTGTTAATTTGGTGAAG+AGG - chr2.1:21714350-21714369 MS.gene060697:intron 25.0%
!!! AGAACATTTTAGTTTGTTTG+TGG - chr2.1:21714399-21714418 MS.gene060697:intron 25.0%
!!! ATCTTTTTTGTCATCTAATC+AGG - chr2.1:21715754-21715773 MS.gene060697:intron 25.0%
!!! CTTCTCTAAAATACTAGAAT+CGG + chr2.1:21715367-21715386 None:intergenic 25.0%
!!! TCTTTTTTGTCATCTAATCA+GGG - chr2.1:21715755-21715774 MS.gene060697:intron 25.0%
!!! TTGTTCAAGTTGATTCTTTT+AGG + chr2.1:21715230-21715249 None:intergenic 25.0%
!!! TTTGACTTGTATTTGACTAA+AGG - chr2.1:21713605-21713624 MS.gene060697:intron 25.0%
AACTTGTATCATCACCAATT+TGG - chr2.1:21714135-21714154 MS.gene060697:CDS 30.0%
AAGATCATATCATGAAATGG+AGG - chr2.1:21714979-21714998 MS.gene060697:intron 30.0%
AAGTTAGTAGTAGCCAATAT+CGG - chr2.1:21715447-21715466 MS.gene060697:intron 30.0%
AATGTATCCGGTCTATATAT+AGG - chr2.1:21713883-21713902 MS.gene060697:intron 30.0%
AGCATAATGCAAATACCTTA+TGG - chr2.1:21715950-21715969 MS.gene060697:intron 30.0%
AGTTAAGAAGTAACCAGAAA+AGG + chr2.1:21715144-21715163 None:intergenic 30.0%
ATATATTTCCCTACAGATCA+GGG + chr2.1:21713648-21713667 None:intergenic 30.0%
ATGCATAAGATTTCCTATTG+TGG - chr2.1:21714594-21714613 MS.gene060697:CDS 30.0%
CATTGCATAACTAATGTATC+CGG - chr2.1:21713871-21713890 MS.gene060697:intron 30.0%
GAGGATATAAAAAATAGAGG+TGG - chr2.1:21715546-21715565 MS.gene060697:intron 30.0%
GTATGCATGCATATTTAACT+AGG - chr2.1:21716019-21716038 MS.gene060697:intron 30.0%
GTTAAATATGCATGCATACA+TGG + chr2.1:21716018-21716037 None:intergenic 30.0%
GTTAAGAAGTAACCAGAAAA+GGG + chr2.1:21715143-21715162 None:intergenic 30.0%
TATTTGGCCTATATATAGAC+CGG + chr2.1:21713893-21713912 None:intergenic 30.0%
TCAAAGATATAAAGGATGCT+CGG - chr2.1:21716105-21716124 MS.gene060697:intron 30.0%
TGATACAAGTTAACAAGAGA+CGG + chr2.1:21714126-21714145 None:intergenic 30.0%
TGCTTAGTAAAAAGTTCGAT+CGG - chr2.1:21715698-21715717 MS.gene060697:intron 30.0%
TTAGTACATGTTTGGTATCA+CGG - chr2.1:21713978-21713997 MS.gene060697:intron 30.0%
TTATACCTCCATATGTTGTT+TGG - chr2.1:21714571-21714590 MS.gene060697:CDS 30.0%
TTATGCATCCAAACAACATA+TGG + chr2.1:21714582-21714601 None:intergenic 30.0%
! ATTGTGTGTATCTTTGTTTC+TGG - chr2.1:21713675-21713694 MS.gene060697:CDS 30.0%
! TTGTGTGTATCTTTGTTTCT+GGG - chr2.1:21713676-21713695 MS.gene060697:CDS 30.0%
! TTTGTTATATTAGCCAGTGA+TGG - chr2.1:21715898-21715917 MS.gene060697:intron 30.0%
! TTTTTGCTTACAAATGTGAC+CGG + chr2.1:21713835-21713854 None:intergenic 30.0%
!! TCTAGTATTTTAGAGAAGTC+AGG - chr2.1:21715369-21715388 MS.gene060697:intron 30.0%
!!! CTTTTTTGTCATCTAATCAG+GGG - chr2.1:21715756-21715775 MS.gene060697:intron 30.0%
AAAAGATGTATCCTCAGTAC+TGG + chr2.1:21715741-21715760 None:intergenic 35.0%
AAATGAGACTGCAAGTAGTT+AGG + chr2.1:21715091-21715110 None:intergenic 35.0%
ACAGATCAGGGTTATTTGAA+AGG + chr2.1:21713636-21713655 None:intergenic 35.0%
AGTTAGTAGTAGCCAATATC+GGG - chr2.1:21715448-21715467 MS.gene060697:intron 35.0%
AGTTTAACTATACACACCCT+AGG + chr2.1:21714225-21714244 None:intergenic 35.0%
ATATCCTCATGTTCTGTGTT+TGG + chr2.1:21715534-21715553 None:intergenic 35.0%
ATGTCGAAACACATAACTCA+CGG - chr2.1:21714938-21714957 MS.gene060697:intron 35.0%
CAAAGATATAAAGGATGCTC+GGG - chr2.1:21716106-21716125 MS.gene060697:intron 35.0%
CTTTCTTCATAGACAATCAC+TGG - chr2.1:21714464-21714483 MS.gene060697:CDS 35.0%
GACTGGTAACTTCTAATACT+TGG + chr2.1:21714700-21714719 None:intergenic 35.0%
GATATATTTCCCTACAGATC+AGG + chr2.1:21713649-21713668 None:intergenic 35.0%
GGGAAGATCATATCATGAAA+TGG - chr2.1:21714976-21714995 MS.gene060697:intron 35.0%
GTCATTTGACATTAGCATGT+TGG - chr2.1:21714855-21714874 MS.gene060697:intron 35.0%
GTGATTGTCTATGAAGAAAG+AGG + chr2.1:21714464-21714483 None:intergenic 35.0%
GTGTGAATTGTTCAAAGTGA+AGG - chr2.1:21713751-21713770 MS.gene060697:CDS 35.0%
TAAGTTCGTGTTTGGTATCA+TGG + chr2.1:21714082-21714101 None:intergenic 35.0%
TAGACTTTAATCCAGTACTG+AGG - chr2.1:21715727-21715746 MS.gene060697:intron 35.0%
TCAAATAACCCTGATCTGTA+GGG - chr2.1:21713637-21713656 MS.gene060697:intron 35.0%
TCATGCAAAGATTGAGAAGA+TGG - chr2.1:21714718-21714737 MS.gene060697:intron 35.0%
TGTATCATCACCAATTTGGA+TGG - chr2.1:21714139-21714158 MS.gene060697:CDS 35.0%
TGTCTTATCAAAGAAAGGTG+TGG - chr2.1:21715482-21715501 MS.gene060697:intron 35.0%
TTAGAGAAGTCAGGTGAATT+GGG - chr2.1:21715378-21715397 MS.gene060697:intron 35.0%
TTCAAATAACCCTGATCTGT+AGG - chr2.1:21713636-21713655 MS.gene060697:intron 35.0%
TTGCAAACAAGCCTAATTCA+TGG + chr2.1:21715039-21715058 None:intergenic 35.0%
TTGTCGTTACTCTTTCACAA+TGG + chr2.1:21714519-21714538 None:intergenic 35.0%
TTTAGAGAAGTCAGGTGAAT+TGG - chr2.1:21715377-21715396 MS.gene060697:intron 35.0%
! AAGGAAGTAAGGATTAGTGT+TGG - chr2.1:21715991-21716010 MS.gene060697:intron 35.0%
! ATGTACTAAAGTACTCCCTT+TGG + chr2.1:21713967-21713986 None:intergenic 35.0%
! CTTCTTGATTTGACATTACC+TGG + chr2.1:21716073-21716092 None:intergenic 35.0%
! GGAGTACTTTAGTACATGTT+TGG - chr2.1:21713970-21713989 MS.gene060697:intron 35.0%
! GGCTTGTTTGCAATATTTGA+TGG - chr2.1:21715046-21715065 MS.gene060697:intron 35.0%
!! AGCTGTCACTTTCTTTATCA+CGG - chr2.1:21713792-21713811 MS.gene060697:intron 35.0%
!! GGTTTTGTATCAAGATTTCC+AGG - chr2.1:21715567-21715586 MS.gene060697:intron 35.0%
!!! TTTTAGTTTGTTTGTGGCCA+CGG - chr2.1:21714405-21714424 MS.gene060697:intron 35.0%
AAGAGACGGTAAACCACAAA+AGG + chr2.1:21714112-21714131 None:intergenic 40.0%
AGAACCTGTAAATGCTGTCA+AGG - chr2.1:21715326-21715345 MS.gene060697:intron 40.0%
AGATTTCCTATTGTGGATGC+TGG - chr2.1:21714601-21714620 MS.gene060697:CDS 40.0%
AGCTCATTCTTTCATGACCT+AGG - chr2.1:21714205-21714224 MS.gene060697:CDS 40.0%
ATCTTCTCTACTGTCACATG+TGG + chr2.1:21715862-21715881 None:intergenic 40.0%
ATGATCCACTGACAGTTGTT+TGG + chr2.1:21715508-21715527 None:intergenic 40.0%
ATTTGGATGGTAGACTTCTG+TGG - chr2.1:21714152-21714171 MS.gene060697:CDS 40.0%
CAGAAGTCTACCATCCAAAT+TGG + chr2.1:21714152-21714171 None:intergenic 40.0%
CATCTTTCCTAGAAGAGAGT+AGG + chr2.1:21714295-21714314 None:intergenic 40.0%
CATGGGAAAAAATGGATGGT+TGG + chr2.1:21715289-21715308 None:intergenic 40.0%
CGGTGAGTTTATCGAAATCA+TGG - chr2.1:21713998-21714017 MS.gene060697:CDS 40.0%
CTGACCATCAATCAATATCG+CGG + chr2.1:21715427-21715446 None:intergenic 40.0%
CTTCTCAATCTTTGCATGAC+TGG + chr2.1:21714717-21714736 None:intergenic 40.0%
GCTACATGGGAAAAAATGGA+TGG + chr2.1:21715293-21715312 None:intergenic 40.0%
GCTCATTCTTTCATGACCTA+GGG - chr2.1:21714206-21714225 MS.gene060697:CDS 40.0%
GTGATAAAGAAAGTGACAGC+TGG + chr2.1:21713793-21713812 None:intergenic 40.0%
GTTAGTAGTAGCCAATATCG+GGG - chr2.1:21715449-21715468 MS.gene060697:intron 40.0%
GTTTATCAGACCCTGATTCA+GGG - chr2.1:21714900-21714919 MS.gene060697:intron 40.0%
TCACTGAAGAAGCAGTTAAC+AGG - chr2.1:21716144-21716163 MS.gene060697:intron 40.0%
TCAGGCTACATGGGAAAAAA+TGG + chr2.1:21715297-21715316 None:intergenic 40.0%
TCTTTCCTTTCCCTGAATCA+GGG + chr2.1:21714913-21714932 None:intergenic 40.0%
TGAACCAAACACAGAACATG+AGG - chr2.1:21715527-21715546 MS.gene060697:intron 40.0%
TGCATCCAAACAACATATGG+AGG + chr2.1:21714579-21714598 None:intergenic 40.0%
TGTTAACTGCTTCTTCAGTG+AGG + chr2.1:21716145-21716164 None:intergenic 40.0%
TTGCAGGAGAAAGTTGGATT+TGG - chr2.1:21714878-21714897 MS.gene060697:intron 40.0%
TTGTTTCCAGCATCCACAAT+AGG + chr2.1:21714610-21714629 None:intergenic 40.0%
! AAGAGGTAACTTCCCTTTTC+TGG - chr2.1:21715128-21715147 MS.gene060697:intron 40.0%
! CTACTCTCTTCTAGGAAAGA+TGG - chr2.1:21714293-21714312 MS.gene060697:intron 40.0%
! GTTACCGCGATATTGATTGA+TGG - chr2.1:21715420-21715439 MS.gene060697:intron 40.0%
!! CTTCTAGGAAAGATGGACTA+TGG - chr2.1:21714300-21714319 MS.gene060697:intron 40.0%
!! TATTAGCCAGTGATGGATTG+TGG - chr2.1:21715905-21715924 MS.gene060697:intron 40.0%
!! TGTATCTTTGTTTCTGGGTC+AGG - chr2.1:21713681-21713700 MS.gene060697:CDS 40.0%
AAGTCAGGTGAATTGGGAAG+AGG - chr2.1:21715384-21715403 MS.gene060697:intron 45.0%
AGATATAAAGGATGCTCGGG+CGG - chr2.1:21716109-21716128 MS.gene060697:intron 45.0%
AGTCAGGTGAATTGGGAAGA+GGG - chr2.1:21715385-21715404 MS.gene060697:intron 45.0%
ATTCTGATATCGTTGGTCCG+TGG + chr2.1:21714425-21714444 None:intergenic 45.0%
CACGGCTTTCACTTGGTAAA+GGG - chr2.1:21714956-21714975 MS.gene060697:intron 45.0%
CATAACTCACGGCTTTCACT+TGG - chr2.1:21714949-21714968 MS.gene060697:intron 45.0%
CGGGCTGTCTTATCAAAGAA+AGG - chr2.1:21715477-21715496 MS.gene060697:intron 45.0%
CTCTTTCCTTTCCCTGAATC+AGG + chr2.1:21714914-21714933 None:intergenic 45.0%
GAAAAGCAGCGACGATATCT+CGG - chr2.1:21716166-21716185 MS.gene060697:intron 45.0%
GCTTCCTTGACAGCATTTAC+AGG + chr2.1:21715333-21715352 None:intergenic 45.0%
GGTTTATCAGACCCTGATTC+AGG - chr2.1:21714899-21714918 MS.gene060697:intron 45.0%
GTGCTTACCTACTCTCTTCT+AGG - chr2.1:21714285-21714304 MS.gene060697:intron 45.0%
TAGCCAATATCGGGGATTCT+CGG - chr2.1:21715457-21715476 MS.gene060697:intron 45.0%
TAGGTACATTGTGACCAGCA+TGG + chr2.1:21715072-21715091 None:intergenic 45.0%
TCACGGCTTTCACTTGGTAA+AGG - chr2.1:21714955-21714974 MS.gene060697:intron 45.0%
TGCTTACAAATGTGACCGGA+CGG + chr2.1:21713831-21713850 None:intergenic 45.0%
! AGTGACAGCTGGTTAGTTCT+AGG + chr2.1:21713782-21713801 None:intergenic 45.0%
! GACATTAGCATGTTGGTTGC+AGG - chr2.1:21714862-21714881 MS.gene060697:intron 45.0%
! GCAATATTTGATGGCCATGC+TGG - chr2.1:21715055-21715074 MS.gene060697:intron 45.0%
! TGTTGGTTGCAGGAGAAAGT+TGG - chr2.1:21714872-21714891 MS.gene060697:intron 45.0%
ACAGGTTCTGTCCAGAAGTC+AGG + chr2.1:21715315-21715334 None:intergenic 50.0%
AGCCAATATCGGGGATTCTC+GGG - chr2.1:21715458-21715477 MS.gene060697:intron 50.0%
GAAGAGGGTGAGAAAGTTGC+TGG - chr2.1:21714366-21714385 MS.gene060697:intron 50.0%
GACCTTCCACAATCCATCAC+TGG + chr2.1:21715914-21715933 None:intergenic 50.0%
GTCAGGTGAATTGGGAAGAG+GGG - chr2.1:21715386-21715405 MS.gene060697:intron 50.0%
GTCCAGAAGTCAGGCTACAT+GGG + chr2.1:21715306-21715325 None:intergenic 50.0%
TCAGACCCTGATTCAGGGAA+AGG - chr2.1:21714905-21714924 MS.gene060697:intron 50.0%
TCAGGTGAATTGGGAAGAGG+GGG - chr2.1:21715387-21715406 MS.gene060697:intron 50.0%
TGTCCAGAAGTCAGGCTACA+TGG + chr2.1:21715307-21715326 None:intergenic 50.0%
TGTGGCCAAACAACTGTCAG+TGG - chr2.1:21715500-21715519 MS.gene060697:intron 50.0%
TTCCCATGTAGCCTGACTTC+TGG - chr2.1:21715301-21715320 MS.gene060697:intron 50.0%
!! ACGTTCCACGAGTTGATGGA+CGG - chr2.1:21715779-21715798 MS.gene060697:intron 50.0%
!! AGCCAGTGATGGATTGTGGA+AGG - chr2.1:21715909-21715928 MS.gene060697:intron 50.0%
AGCCCGAGAATCCCCGATAT+TGG + chr2.1:21715463-21715482 None:intergenic 55.0%
! GGCATGCTGTTTACTCCGTC+CGG - chr2.1:21713813-21713832 MS.gene060697:intron 55.0%
!! TCCACGAGTTGATGGACGGT+TGG - chr2.1:21715783-21715802 MS.gene060697:intron 55.0%
!! TTGGCAGTGTCGAGGGCATT+TGG - chr2.1:21715802-21715821 MS.gene060697:intron 55.0%
ATGGACGGTTGGCAGTGTCG+AGG - chr2.1:21715794-21715813 MS.gene060697:intron 60.0%
GCCAACCGTCCATCAACTCG+TGG + chr2.1:21715787-21715806 None:intergenic 60.0%
! GGGGACGTTCCACGAGTTGA+TGG - chr2.1:21715775-21715794 MS.gene060697:intron 60.0%
! TGGACGGTTGGCAGTGTCGA+GGG - chr2.1:21715795-21715814 MS.gene060697:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 21713373 21716211 21713373 ID=MS.gene060697
chr2.1 mRNA 21713373 21716211 21713373 ID=MS.gene060697.t1;Parent=MS.gene060697
chr2.1 exon 21716179 21716211 21716179 ID=MS.gene060697.t1.exon1;Parent=MS.gene060697.t1
chr2.1 CDS 21716179 21716211 21716179 ID=cds.MS.gene060697.t1;Parent=MS.gene060697.t1
chr2.1 exon 21714452 21714700 21714452 ID=MS.gene060697.t1.exon2;Parent=MS.gene060697.t1
chr2.1 CDS 21714452 21714700 21714452 ID=cds.MS.gene060697.t1;Parent=MS.gene060697.t1
chr2.1 exon 21713996 21714272 21713996 ID=MS.gene060697.t1.exon3;Parent=MS.gene060697.t1
chr2.1 CDS 21713996 21714272 21713996 ID=cds.MS.gene060697.t1;Parent=MS.gene060697.t1
chr2.1 exon 21713654 21713808 21713654 ID=MS.gene060697.t1.exon4;Parent=MS.gene060697.t1
chr2.1 CDS 21713654 21713808 21713654 ID=cds.MS.gene060697.t1;Parent=MS.gene060697.t1
chr2.1 exon 21713373 21713510 21713373 ID=MS.gene060697.t1.exon5;Parent=MS.gene060697.t1
chr2.1 CDS 21713373 21713510 21713373 ID=cds.MS.gene060697.t1;Parent=MS.gene060697.t1
Gene Sequence

>MS.gene060697

ATGGCTGCTAGAGATATTCTTCATAAGATGAAGGTATATTTCCATATAGATCCTTTATTTCATTATACTTTATTGTTAAGTTGAATAAATGTTCCAATATTAGATCATACATACTTTTTTTTTTTTTTGCTGCCAATTTTCATTAATTTGATTCAATGAGCTTTTTTAATATGCTTAATTAATGAACCCCTTTAGTTTTTTGTGTGTTTTTCATTTGGCTTGCTTAATTCAGTTTGACTTGTATTTGACTAAAGGTAGAACCTTTCAAATAACCCTGATCTGTAGGGAAATATATCAATTGAATTGTGTGTATCTTTGTTTCTGGGTCAGGAAACTATACTATGCCAAATTATGTTAAATTGTTTTTAACAACTATCTGTGTGAATTGTTCAAAGTGAAGGCTTATCCTAGAACTAACCAGCTGTCACTTTCTTTATCACGGCATGCTGTTTACTCCGTCCGGTCACATTTGTAAGCAAAAAAATAAGTTTTTAGGTTCATTGCATAACTAATGTATCCGGTCTATATATAGGCCAAATACATTCGTTATTCAATGAACCTAAAAAAAATGGTTTTTACTTATAAATGTAACCAAAGGGAGTACTTTAGTACATGTTTGGTATCACGGTGAGTTTATCGAAATCATGGTGAGTTTATCGAAATCACTGTGAGACATAGTGATTTTGCTGTGATTCTGTCAAACTCACCATGATACCAAACACGAACTTATTATTATCCTTTTGTGGTTTACCGTCTCTTGTTAACTTGTATCATCACCAATTTGGATGGTAGACTTCTGTGGTATGACAAAATTACAAAACAATGATATTAGAGCTCATTCTTTCATGACCTAGGGTGTGTATAGTTAAACTATACACCATCAAGAATTTTGCTAAATTGTAAAAGAAAATAGTGCTTACCTACTCTCTTCTAGGAAAGATGGACTATGGAAAAGCTATTTGCTAATTTTGCTAAAGTTATTGTTAATTTGGTGAAGAGGGTGAGAAAGTTGCTGGTCATTTGACCAGAACATTTTAGTTTGTTTGTGGCCACGGACCAACGATATCAGAATTAATTGATTGAATGCACCTCTTTCTTCATAGACAATCACTGGTTTGAAACGCACTTTCTTGACTATGTGAACCATTGTGAAAGAGTAACGACAATGTCAAATTTATAATGATATGATAATGATAGGTTATACCTCCATATGTTGTTTGGATGCATAAGATTTCCTATTGTGGATGCTGGAAACAATTAGTGATATAAGAAATACCAATTTGATGGAATGTTTTTCTTTAGTTCAACTTTCTTGAAGAATTCACCAAGTATTAGAAGTTACCAGTCATGCAAAGATTGAGAAGATGGTTGTGATTGTGACCTCCATTAGCTAATTAAAGTTTGCAAATCTTTCTGTCAAGACATTTCTCTATACTTTCTGTCAATTTTCCCTCGCTTAGTATTCTATATATTTTTGTGACGGTCATTTGACATTAGCATGTTGGTTGCAGGAGAAAGTTGGATTTGGTTTATCAGACCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAACACATAACTCACGGCTTTCACTTGGTAAAGGGAAGATCATATCATGAAATGGAGGATTATCTTGTTGCTAGATTTAAGCAAATTGATAACCATGAATTAGGCTTGTTTGCAATATTTGATGGCCATGCTGGTCACAATGTACCTAACTACTTGCAGTCTCATTTGTTTGATAATATCTTAAAAGAGGTAACTTCCCTTTTCTGGTTACTTCTTAACTTGTTTTCTGCTTTCTATGATTCATGAACTGTACTCGAGTTTTCAGACAGATCTGCTTGCAGATCCTAAAAGAATCAACTTGAACAATTCATAATGTTAATTCAAGTCGCATGAATATGATGTCCAACCATCCATTTTTTCCCATGTAGCCTGACTTCTGGACAGAACCTGTAAATGCTGTCAAGGAAGCGTATAGTATAACCGATTCTAGTATTTTAGAGAAGTCAGGTGAATTGGGAAGAGGGGGTTCAACAGCAGTTACCGCGATATTGATTGATGGTCAGAAGTTAGTAGTAGCCAATATCGGGGATTCTCGGGCTGTCTTATCAAAGAAAGGTGTGGCCAAACAACTGTCAGTGGATCATGAACCAAACACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTTCCAGGTATGATACACTTTATAATGGTTATAATTTTGCTTGATCTTATTAGAATTTGACACATTTTTCGCTCAGCGAGCTTATGATTTTCAATGCATTTCTGATATAGATGAATTGCTTAGTAAAAAGTTCGATCGGACGTTATAGACTTTAATCCAGTACTGAGGATACATCTTTTTTGTCATCTAATCAGGGGACGTTCCACGAGTTGATGGACGGTTGGCAGTGTCGAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCACATGTGACAGTAGAGAAGATAAGTGAAGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTGTGGAAGGTCAGTTTTTGATAAATGAAGCATAATGCAAATACCTTATGGATATATATTTTTAATACTAAGGAAGTAAGGATTAGTGTTGGACCATGTATGCATGCATATTTAACTAGGGTTTAAATCTGTTTATTCATATATGATTCCAGGTAATGTCAAATCAAGAAGCCGTTGATTGTATCAAAGATATAAAGGATGCTCGGGCGGCAGCAAAGCGCCTCACTGAAGAAGCAGTTAACAGGAAAAGCAGCGACGATATCTCGGTCATCGTTGTGAAACTTCAGTGA

Protein sequence

>MS.gene060697.t1

MAARDILHKMKEKVGFGLSDPDSGKGKSKMSKHITHGFHLVKGRSYHEMEDYLVARFKQIDNHELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWTEPVNAVKEAYSITDSSILEKSGELGRGGSTAVTAILIDGQKLVVANIGDSRAVLSKKGVAKQLSVDHEPNTEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVEKISEDAEFVILASDGLWKVMSNQEAVDCIKDIKDARAAAKRLTEEAVNRKSSDDISVIVVKLQ