Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45765.t1 | XP_003627756.1 | 92.6 | 431 | 29 | 1 | 1 | 428 | 1 | 431 | 1.50E-235 | 825.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45765.t1 | A8MRX0 | 53.5 | 424 | 189 | 3 | 2 | 417 | 11 | 434 | 1.7e-131 | 470.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45765.t1 | G7LEJ7 | 92.6 | 431 | 29 | 1 | 1 | 428 | 1 | 431 | 1.1e-235 | 825.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04986 | MS.gene45765 | 0.810424 | 1.16E-50 | -1.69E-46 |
| MS.gene056185 | MS.gene45765 | 0.918424 | 1.58E-86 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45765.t1 | MTR_8g037910 | 92.575 | 431 | 29 | 1 | 1 | 428 | 1 | 431 | 0.0 | 828 |
| MS.gene45765.t1 | MTR_8g037880 | 84.722 | 432 | 62 | 2 | 1 | 428 | 1 | 432 | 0.0 | 756 |
| MS.gene45765.t1 | MTR_8g037910 | 93.987 | 316 | 19 | 0 | 1 | 316 | 1 | 316 | 0.0 | 614 |
| MS.gene45765.t1 | MTR_8g037910 | 93.382 | 272 | 18 | 0 | 1 | 272 | 1 | 272 | 0.0 | 526 |
| MS.gene45765.t1 | MTR_5g012130 | 51.972 | 431 | 193 | 6 | 4 | 423 | 13 | 440 | 5.05e-148 | 428 |
| MS.gene45765.t1 | MTR_5g012130 | 55.031 | 318 | 139 | 3 | 4 | 317 | 33 | 350 | 2.95e-115 | 341 |
| MS.gene45765.t1 | MTR_3g437580 | 41.435 | 432 | 227 | 10 | 4 | 416 | 13 | 437 | 4.96e-109 | 329 |
| MS.gene45765.t1 | MTR_3g437580 | 43.385 | 325 | 168 | 6 | 4 | 313 | 13 | 336 | 5.02e-88 | 272 |
| MS.gene45765.t1 | MTR_5g012130 | 50.806 | 248 | 118 | 3 | 4 | 247 | 33 | 280 | 2.27e-73 | 231 |
| MS.gene45765.t1 | MTR_3g109520 | 28.095 | 210 | 121 | 6 | 6 | 211 | 41 | 224 | 1.07e-16 | 82.0 |
| MS.gene45765.t1 | MTR_2g450510 | 26.877 | 253 | 127 | 8 | 3 | 221 | 4 | 232 | 4.98e-16 | 80.5 |
| MS.gene45765.t1 | MTR_2g450310 | 26.877 | 253 | 127 | 8 | 3 | 221 | 4 | 232 | 1.89e-15 | 78.6 |
| MS.gene45765.t1 | MTR_7g107710 | 23.488 | 281 | 174 | 6 | 4 | 278 | 6 | 251 | 3.65e-15 | 77.0 |
| MS.gene45765.t1 | MTR_1g011630 | 24.038 | 208 | 128 | 6 | 6 | 211 | 18 | 197 | 5.61e-14 | 73.6 |
| MS.gene45765.t1 | MTR_2g043850 | 27.404 | 208 | 99 | 7 | 3 | 183 | 13 | 195 | 8.83e-14 | 73.6 |
| MS.gene45765.t1 | MTR_2g044140 | 27.885 | 208 | 98 | 7 | 3 | 183 | 13 | 195 | 1.22e-13 | 73.2 |
| MS.gene45765.t1 | MTR_7g107690 | 24.681 | 235 | 143 | 5 | 3 | 230 | 7 | 214 | 3.68e-13 | 70.9 |
| MS.gene45765.t1 | MTR_5g033260 | 24.880 | 209 | 131 | 4 | 4 | 210 | 6 | 190 | 3.94e-12 | 67.8 |
| MS.gene45765.t1 | MTR_1g008380 | 24.880 | 209 | 128 | 6 | 6 | 211 | 44 | 226 | 3.40e-11 | 65.1 |
| MS.gene45765.t1 | MTR_8g432640 | 22.667 | 225 | 147 | 5 | 4 | 226 | 6 | 205 | 6.18e-11 | 64.3 |
| MS.gene45765.t1 | MTR_6g086870 | 24.883 | 213 | 127 | 5 | 6 | 211 | 22 | 208 | 9.20e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45765.t1 | AT1G62620 | 52.941 | 425 | 189 | 4 | 4 | 417 | 13 | 437 | 1.16e-156 | 450 |
| MS.gene45765.t1 | AT1G12140 | 53.538 | 424 | 189 | 3 | 2 | 417 | 11 | 434 | 9.47e-156 | 448 |
| MS.gene45765.t1 | AT1G12140 | 53.538 | 424 | 189 | 3 | 2 | 417 | 11 | 434 | 9.47e-156 | 448 |
| MS.gene45765.t1 | AT1G63370 | 52.471 | 425 | 191 | 4 | 4 | 417 | 13 | 437 | 4.91e-155 | 446 |
| MS.gene45765.t1 | AT1G12200 | 53.972 | 428 | 182 | 5 | 4 | 417 | 14 | 440 | 1.89e-154 | 445 |
| MS.gene45765.t1 | AT1G12140 | 53.066 | 424 | 189 | 4 | 2 | 417 | 11 | 432 | 3.54e-152 | 439 |
| MS.gene45765.t1 | AT1G62600 | 52.225 | 427 | 191 | 4 | 4 | 417 | 13 | 439 | 4.03e-150 | 434 |
| MS.gene45765.t1 | AT1G62580 | 53.176 | 425 | 187 | 5 | 4 | 417 | 14 | 437 | 5.49e-147 | 426 |
| MS.gene45765.t1 | AT1G12160 | 49.658 | 439 | 192 | 7 | 4 | 416 | 12 | 447 | 8.98e-147 | 426 |
| MS.gene45765.t1 | AT1G62620 | 55.467 | 375 | 159 | 3 | 4 | 370 | 13 | 387 | 3.13e-145 | 419 |
| MS.gene45765.t1 | AT1G12130 | 51.011 | 445 | 189 | 7 | 4 | 423 | 13 | 453 | 7.10e-144 | 419 |
| MS.gene45765.t1 | AT1G65860 | 49.406 | 421 | 205 | 4 | 4 | 416 | 13 | 433 | 2.37e-143 | 417 |
| MS.gene45765.t1 | AT1G62560 | 49.057 | 424 | 203 | 6 | 4 | 416 | 13 | 434 | 4.60e-143 | 416 |
| MS.gene45765.t1 | AT1G62540 | 50.831 | 421 | 199 | 4 | 4 | 416 | 13 | 433 | 6.64e-141 | 410 |
| MS.gene45765.t1 | AT1G62580 | 49.563 | 458 | 186 | 8 | 4 | 417 | 14 | 470 | 9.03e-140 | 409 |
| MS.gene45765.t1 | AT1G62600 | 54.377 | 377 | 162 | 3 | 4 | 370 | 13 | 389 | 2.69e-138 | 402 |
| MS.gene45765.t1 | AT1G62570 | 50.118 | 423 | 199 | 5 | 4 | 416 | 13 | 433 | 2.75e-138 | 404 |
| MS.gene45765.t1 | AT1G62540 | 48.655 | 446 | 196 | 6 | 4 | 416 | 13 | 458 | 5.12e-137 | 402 |
| MS.gene45765.t1 | AT1G62560 | 51.451 | 379 | 174 | 5 | 4 | 374 | 13 | 389 | 2.20e-134 | 392 |
| MS.gene45765.t1 | AT1G63340 | 48.463 | 423 | 170 | 5 | 4 | 417 | 14 | 397 | 1.08e-131 | 386 |
| MS.gene45765.t1 | AT1G62540 | 48.694 | 421 | 190 | 6 | 4 | 416 | 13 | 415 | 7.72e-130 | 382 |
| MS.gene45765.t1 | AT1G63370 | 56.037 | 323 | 134 | 3 | 4 | 318 | 13 | 335 | 1.83e-124 | 364 |
| MS.gene45765.t1 | AT1G12200 | 57.276 | 323 | 127 | 3 | 4 | 316 | 14 | 335 | 1.93e-121 | 358 |
| MS.gene45765.t1 | AT5G61290 | 44.342 | 433 | 214 | 7 | 4 | 416 | 16 | 441 | 3.97e-119 | 355 |
| MS.gene45765.t1 | AT1G62580 | 55.287 | 331 | 130 | 3 | 4 | 316 | 14 | 344 | 3.39e-113 | 336 |
| MS.gene45765.t1 | AT5G07800 | 42.069 | 435 | 225 | 9 | 3 | 416 | 15 | 443 | 1.03e-110 | 333 |
| MS.gene45765.t1 | AT1G63390 | 58.042 | 143 | 52 | 2 | 4 | 138 | 13 | 155 | 4.60e-42 | 146 |
| MS.gene45765.t1 | AT5G45180 | 24.792 | 480 | 236 | 21 | 3 | 389 | 12 | 459 | 9.14e-20 | 91.7 |
| MS.gene45765.t1 | AT4G13260 | 23.558 | 208 | 133 | 4 | 6 | 211 | 30 | 213 | 4.52e-13 | 70.1 |
| MS.gene45765.t1 | AT4G13260 | 23.558 | 208 | 133 | 4 | 6 | 211 | 30 | 213 | 9.54e-13 | 70.1 |
| MS.gene45765.t1 | AT5G11320 | 23.301 | 206 | 130 | 4 | 6 | 211 | 19 | 196 | 3.51e-12 | 67.8 |
| MS.gene45765.t1 | AT5G11320 | 23.301 | 206 | 130 | 4 | 6 | 211 | 19 | 196 | 8.02e-12 | 67.0 |
| MS.gene45765.t1 | AT1G04610 | 22.535 | 213 | 130 | 4 | 6 | 210 | 39 | 224 | 9.49e-11 | 63.9 |
Find 118 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACAGGTTGTGATCTTAAT+TGG | 0.129363 | 8.3:+58773566 | MS.gene45765:intron |
| CTGTGATCCGAGAACGTTTC+CGG | 0.221154 | 8.3:+58772620 | MS.gene45765:CDS |
| TCATTCCATACGTCCGTTTC+AGG | 0.249205 | 8.3:+58774426 | MS.gene45765:CDS |
| GAAGAATTTGCAGGTGAGTT+TGG | 0.263053 | 8.3:+58772669 | MS.gene45765:CDS |
| CCAAGACATGCTTTGGTTCC+TGG | 0.277481 | 8.3:+58772837 | MS.gene45765:CDS |
| GCTCCATGGCTCTCTTTCAT+TGG | 0.284807 | 8.3:+58774147 | MS.gene45765:CDS |
| CAAATACCACATTCCTTTCC+TGG | 0.326620 | 8.3:+58774050 | MS.gene45765:CDS |
| TTACTATTCCATTAGTTTCC+AGG | 0.333072 | 8.3:-58774068 | None:intergenic |
| GCAGGTGAGTTTGGAATTCA+TGG | 0.347435 | 8.3:+58772678 | MS.gene45765:CDS |
| ATTCCTTTCCTGGAAACTAA+TGG | 0.347863 | 8.3:+58774060 | MS.gene45765:CDS |
| TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8.3:-58773904 | None:intergenic |
| CACCACCTCTGTTTCAAATC+GGG | 0.375170 | 8.3:-58772706 | None:intergenic |
| GGTTGCCTCCGTTAGAAGAT+TGG | 0.375234 | 8.3:+58776138 | MS.gene45765:CDS |
| TCACCACCTCTGTTTCAAAT+CGG | 0.375247 | 8.3:-58772707 | None:intergenic |
| AACTTCATACCCTTCAATAG+TGG | 0.379745 | 8.3:-58773668 | None:intergenic |
| ATGACTGGGATGATAACTAT+TGG | 0.380916 | 8.3:+58776213 | MS.gene45765:CDS |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.381244 | 8.3:-58772516 | None:intergenic |
| TGTAGAACCAAGACATGCTT+TGG | 0.386407 | 8.3:+58772830 | MS.gene45765:CDS |
| CATGTCTTGGTTCTACAAAA+TGG | 0.387592 | 8.3:-58772824 | None:intergenic |
| ATACCCTTCAATAGTGGATT+CGG | 0.390856 | 8.3:-58773662 | None:intergenic |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.3:-58772515 | None:intergenic |
| TGTGATCCGAGAACGTTTCC+GGG | 0.400644 | 8.3:+58772621 | MS.gene45765:CDS |
| TCATGACCCGGAAACGTTCT+CGG | 0.402567 | 8.3:-58772627 | None:intergenic |
| GGCGATGAGGCCGGAGACTC+CGG | 0.404278 | 8.3:-58772379 | None:intergenic |
| TTGAGAGGAAAGGGAAGGAC+TGG | 0.407090 | 8.3:+58772733 | MS.gene45765:CDS |
| CAATGGCTAGCGGCACAGAT+TGG | 0.414104 | 8.3:+58776116 | MS.gene45765:CDS |
| TGGTGAAAGTTGAGAGGAAA+GGG | 0.417022 | 8.3:+58772724 | MS.gene45765:CDS |
| AGATTCCATCATTTCTTCTT+CGG | 0.421032 | 8.3:-58774350 | None:intergenic |
| GCCTTCCTGTTGTAGCTCCT+TGG | 0.421074 | 8.3:-58772403 | None:intergenic |
| GAAGCGGTTGTTGTATGTTC+TGG | 0.424267 | 8.3:+58772801 | MS.gene45765:CDS |
| TTCCTCCTTCGCTGGCTCCA+TGG | 0.424941 | 8.3:+58774133 | MS.gene45765:CDS |
| GACATCTCAAAAGATATTGC+AGG | 0.428767 | 8.3:+58773608 | MS.gene45765:CDS |
| TACAGGTTGTGATCTTAATT+GGG | 0.433986 | 8.3:+58773567 | MS.gene45765:intron |
| AAATCTTCCAAGGCAAATCA+TGG | 0.439066 | 8.3:+58772563 | MS.gene45765:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.3:+58773840 | MS.gene45765:CDS |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.449086 | 8.3:+58772369 | MS.gene45765:CDS |
| CCTGGTATTGAAAACTTTCG+TGG | 0.451982 | 8.3:+58772855 | MS.gene45765:CDS |
| CGCCGCCAAGGAGCTACAAC+AGG | 0.458403 | 8.3:+58772398 | MS.gene45765:CDS |
| GGCTTGGTTGTCTTTGAAGA+TGG | 0.458513 | 8.3:+58773861 | MS.gene45765:CDS |
| ACTGCTGTGAACTGTTTCTC+TGG | 0.461299 | 8.3:-58772520 | None:intergenic |
| AGGATTCTCGCTTGGACAAA+GGG | 0.470355 | 8.3:-58772599 | None:intergenic |
| CGGATCACAGGATTCTCGCT+TGG | 0.472811 | 8.3:-58772607 | None:intergenic |
| AAGAATCCCATGATTTGCCT+TGG | 0.478861 | 8.3:-58772570 | None:intergenic |
| ACCTACCGAAGAAGAAATGA+TGG | 0.482196 | 8.3:+58774345 | MS.gene45765:CDS |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.483813 | 8.3:+58772354 | MS.gene45765:CDS |
| AATGGCTAGCGGCACAGATT+GGG | 0.485605 | 8.3:+58776117 | MS.gene45765:CDS |
| CAGGATTCTCGCTTGGACAA+AGG | 0.488933 | 8.3:-58772600 | None:intergenic |
| GAGAAGAACAACCGCGTTGG+AGG | 0.491903 | 8.3:+58772444 | MS.gene45765:CDS |
| TTGGATGGACAATATGTTGA+TGG | 0.492691 | 8.3:+58776157 | MS.gene45765:CDS |
| ACTATTGAAGGGTATGAAGT+TGG | 0.493692 | 8.3:+58773670 | MS.gene45765:CDS |
| CTCCTTGGCGGCGATGAGGC+CGG | 0.501222 | 8.3:-58772388 | None:intergenic |
| TAAAGACATATATCGCATCT+TGG | 0.506300 | 8.3:+58774375 | MS.gene45765:CDS |
| AGGACTGGGTTGTTGAGTCT+AGG | 0.506737 | 8.3:+58772748 | MS.gene45765:CDS |
| AGCTGATTCATTCTGAATGA+TGG | 0.509144 | 8.3:-58776240 | None:intergenic |
| TGACTGGGATGATAACTATT+GGG | 0.515543 | 8.3:+58776214 | MS.gene45765:CDS |
| CGAAGCATTTCTTCATGACC+CGG | 0.517432 | 8.3:-58772639 | None:intergenic |
| GGACTGGGTTGTTGAGTCTA+GGG | 0.521342 | 8.3:+58772749 | MS.gene45765:CDS |
| ATTCCATTAGTTTCCAGGAA+AGG | 0.523441 | 8.3:-58774063 | None:intergenic |
| ATGGAATGAGTGTAACGCTT+GGG | 0.523974 | 8.3:-58774412 | None:intergenic |
| AGCCATGGAGCCAGCGAAGG+AGG | 0.524115 | 8.3:-58774135 | None:intergenic |
| AAATACCTGAAACGGACGTA+TGG | 0.525652 | 8.3:-58774431 | None:intergenic |
| TGAGAGGAAAGGGAAGGACT+GGG | 0.526653 | 8.3:+58772734 | MS.gene45765:CDS |
| CTCCGGCCTCATCGCCGCCA+AGG | 0.529871 | 8.3:+58772386 | MS.gene45765:CDS |
| GATGCCATAATTCACTGTAC+AGG | 0.531205 | 8.3:+58773900 | MS.gene45765:CDS |
| ACAGACGCAAATACCTGAAA+CGG | 0.534676 | 8.3:-58774439 | None:intergenic |
| CAGGTGAGTTTGGAATTCAT+GGG | 0.536690 | 8.3:+58772679 | MS.gene45765:CDS |
| TTTGAGATGTCAAATGAACT+AGG | 0.538090 | 8.3:-58773596 | None:intergenic |
| TTCCTGTTGTAGCTCCTTGG+CGG | 0.540823 | 8.3:-58772400 | None:intergenic |
| CGATTGAAGATAATCGCGTT+GGG | 0.546471 | 8.3:+58774091 | MS.gene45765:CDS |
| CGGAAACGTTCTCGGATCAC+AGG | 0.547744 | 8.3:-58772619 | None:intergenic |
| TCTCGAAAACGACGACGTTG+TGG | 0.551159 | 8.3:-58772425 | None:intergenic |
| CCAGGAACCAAAGCATGTCT+TGG | 0.554091 | 8.3:-58772837 | None:intergenic |
| ACAACCGCGTTGGAGGAACC+TGG | 0.554708 | 8.3:+58772451 | MS.gene45765:CDS |
| ATGAAATGTATAGAGATGAC+TGG | 0.555017 | 8.3:+58776198 | MS.gene45765:CDS |
| GTTGTGATCTTAATTGGGCT+AGG | 0.557914 | 8.3:+58773572 | MS.gene45765:CDS |
| ACGATTGAAGATAATCGCGT+TGG | 0.558753 | 8.3:+58774090 | MS.gene45765:CDS |
| TAAAACTCTTGCAACCCACT+TGG | 0.561189 | 8.3:-58774305 | None:intergenic |
| TCCATCATTTCTTCTTCGGT+AGG | 0.562596 | 8.3:-58774346 | None:intergenic |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.3:+58772360 | MS.gene45765:CDS |
| TCCTCACTATTTCAAAGACC+AGG | 0.568511 | 8.3:+58772908 | MS.gene45765:CDS |
| GTGGTGAAAGTTGAGAGGAA+AGG | 0.568850 | 8.3:+58772723 | MS.gene45765:CDS |
| CTTTACGCACAAATCTTCCA+AGG | 0.568859 | 8.3:+58772553 | MS.gene45765:CDS |
| TTCGAGAAGAACAACCGCGT+TGG | 0.570371 | 8.3:+58772441 | MS.gene45765:CDS |
| AAAACCGAATCCACTATTGA+AGG | 0.571520 | 8.3:+58773658 | MS.gene45765:CDS |
| GAGAGCCATGGAGCCAGCGA+AGG | 0.571530 | 8.3:-58774138 | None:intergenic |
| CAGAGGTGGTGAAAGTTGAG+AGG | 0.575528 | 8.3:+58772718 | MS.gene45765:CDS |
| GTAGCTCCTTGGCGGCGATG+AGG | 0.577088 | 8.3:-58772392 | None:intergenic |
| GCCTCCGTTAGAAGATTGGA+TGG | 0.580895 | 8.3:+58776142 | MS.gene45765:CDS |
| AATCTTCCAAGGCAAATCAT+GGG | 0.585719 | 8.3:+58772564 | MS.gene45765:CDS |
| AGATATTGCAGGAGTTGCAA+AGG | 0.586378 | 8.3:+58773619 | MS.gene45765:CDS |
| AAACCGAATCCACTATTGAA+GGG | 0.595030 | 8.3:+58773659 | MS.gene45765:CDS |
| CTGGTTGGGTCTATACTAAG+AGG | 0.600004 | 8.3:-58772501 | None:intergenic |
| GCCAAGGAGCTACAACAGGA+AGG | 0.605200 | 8.3:+58772402 | MS.gene45765:CDS |
| GAAGATTTGTGCGTAAAGAG+TGG | 0.607471 | 8.3:-58772548 | None:intergenic |
| TGGGTCTATACTAAGAGGAT+CGG | 0.608316 | 8.3:-58772496 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.3:+58773845 | MS.gene45765:CDS |
| TTGTCCATCCAATCTTCTAA+CGG | 0.613321 | 8.3:-58776146 | None:intergenic |
| TATGGAATGAGTGTAACGCT+TGG | 0.615376 | 8.3:-58774413 | None:intergenic |
| GAAAGTTGAGAGGAAAGGGA+AGG | 0.618934 | 8.3:+58772728 | MS.gene45765:CDS |
| AATTGAGTTACAAGCCAAGT+GGG | 0.620693 | 8.3:+58774291 | MS.gene45765:CDS |
| GGTATGAAGTTGGAAAATGC+TGG | 0.621768 | 8.3:+58773680 | MS.gene45765:CDS |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.623772 | 8.3:+58772785 | MS.gene45765:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.625503 | 8.3:+58773901 | MS.gene45765:CDS |
| TAGTTTCCAGGAAAGGAATG+TGG | 0.628193 | 8.3:-58774056 | None:intergenic |
| CAATATATGTTTCCATACTG+TGG | 0.630725 | 8.3:+58773703 | MS.gene45765:CDS |
| ACCTGGTCTTTGAAATAGTG+AGG | 0.634047 | 8.3:-58772909 | None:intergenic |
| TGGGTTGTTGAGTCTAGGGG+AGG | 0.634206 | 8.3:+58772753 | MS.gene45765:CDS |
| AAACCAATGAAAGAGAGCCA+TGG | 0.638563 | 8.3:-58774150 | None:intergenic |
| GACCCGATTTGAAACAGAGG+TGG | 0.641010 | 8.3:+58772704 | MS.gene45765:CDS |
| GACTGGGTTGTTGAGTCTAG+GGG | 0.643870 | 8.3:+58772750 | MS.gene45765:CDS |
| TGAAATGTATAGAGATGACT+GGG | 0.657076 | 8.3:+58776199 | MS.gene45765:CDS |
| TAATTGAGTTACAAGCCAAG+TGG | 0.658830 | 8.3:+58774290 | MS.gene45765:CDS |
| TCCATCCAATCTTCTAACGG+AGG | 0.663161 | 8.3:-58776143 | None:intergenic |
| AGACATATATCGCATCTTGG+AGG | 0.672722 | 8.3:+58774378 | MS.gene45765:CDS |
| GTCAGGCTGACTACAAACAA+TGG | 0.679900 | 8.3:+58776099 | MS.gene45765:intron |
| TGACTACAAACAATGGCTAG+CGG | 0.698143 | 8.3:+58776106 | MS.gene45765:CDS |
| GTTGACCCGATTTGAAACAG+AGG | 0.712999 | 8.3:+58772701 | MS.gene45765:CDS |
| ATATCCAGGTTCCTCCAACG+CGG | 0.760535 | 8.3:-58772455 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTAAAAAAATACATAA+CGG | + | chr8.3:58774944-58774963 | MS.gene45765:intron | 10.0% |
| !!! | AAATATTTAGATTTAGATTT+TGG | + | chr8.3:58773042-58773061 | MS.gene45765:intron | 10.0% |
| !!! | ATTAATTTTCCAAATAAAAT+AGG | - | chr8.3:58773533-58773552 | None:intergenic | 10.0% |
| !!! | ATTTAATAAGTTGAAATTAT+TGG | + | chr8.3:58772971-58772990 | MS.gene45765:intron | 10.0% |
| !!! | ATTTTATTTGGAAAATTAAT+TGG | + | chr8.3:58773533-58773552 | MS.gene45765:intron | 10.0% |
| !! | AATATCTATCATATAAAGTA+TGG | - | chr8.3:58773766-58773785 | None:intergenic | 15.0% |
| !! | ATATAAACTAATATTGTAAC+AGG | + | chr8.3:58774025-58774044 | MS.gene45765:intron | 15.0% |
| !! | GTACGATTAAAAAAAAAAAA+CGG | + | chr8.3:58774966-58774985 | MS.gene45765:intron | 15.0% |
| !!! | ATTTTCCAAATTTGAAAAAA+TGG | + | chr8.3:58772939-58772958 | MS.gene45765:intron | 15.0% |
| !!! | TAAAACCATTTTTTCAAATT+TGG | - | chr8.3:58772947-58772966 | None:intergenic | 15.0% |
| !! | AATATTGTACAATTTAATCC+AGG | + | chr8.3:58773080-58773099 | MS.gene45765:intron | 20.0% |
| !! | ATATAAATCACCTTCTTATA+GGG | - | chr8.3:58774886-58774905 | None:intergenic | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | + | chr8.3:58773840-58773859 | MS.gene45765:CDS | 20.0% |
| !! | TAAAAGAAAAAATACGTTGA+AGG | - | chr8.3:58773953-58773972 | None:intergenic | 20.0% |
| !! | TAATATTACATTAGATGCAA+TGG | + | chr8.3:58775380-58775399 | MS.gene45765:intron | 20.0% |
| !! | TACAAGTAAATAGTTAAACT+CGG | - | chr8.3:58776069-58776088 | None:intergenic | 20.0% |
| !! | TATATAAATCACCTTCTTAT+AGG | - | chr8.3:58774887-58774906 | None:intergenic | 20.0% |
| !! | TGAACTTAGAGTTAAAAAAA+TGG | + | chr8.3:58775573-58775592 | MS.gene45765:intron | 20.0% |
| !!! | AATCTCTAGATTTTACAAAT+TGG | - | chr8.3:58775970-58775989 | None:intergenic | 20.0% |
| !!! | ATTAAGATGAAGTATTTCAA+TGG | + | chr8.3:58772999-58773018 | MS.gene45765:intron | 20.0% |
| !!! | CTAAGAAATTAATCATTTTG+AGG | + | chr8.3:58774001-58774020 | MS.gene45765:intron | 20.0% |
| !!! | TGTTTAATGCCTATTTTATT+TGG | + | chr8.3:58773521-58773540 | MS.gene45765:intron | 20.0% |
| ! | AACTCGGAAGAATTTATAAT+CGG | - | chr8.3:58776053-58776072 | None:intergenic | 25.0% |
| ! | ATCGTTAAAATTATAAGCAC+CGG | - | chr8.3:58776000-58776019 | None:intergenic | 25.0% |
| ! | TGGAGATATTTATTATGAGA+CGG | - | chr8.3:58773746-58773765 | None:intergenic | 25.0% |
| ! | TTACAATAGAAATAGTTTCC+TGG | - | chr8.3:58774273-58774292 | None:intergenic | 25.0% |
| !! | AGGAGAAAGTTCATTATTTT+TGG | + | chr8.3:58773259-58773278 | MS.gene45765:intron | 25.0% |
| !! | ATTTTTAACATACCACAGTA+TGG | - | chr8.3:58773718-58773737 | None:intergenic | 25.0% |
| !! | CACATCTATATGTTTTCATA+GGG | + | chr8.3:58775444-58775463 | MS.gene45765:intron | 25.0% |
| !! | GGATAATTTTGCTCAATTAA+CGG | + | chr8.3:58774477-58774496 | MS.gene45765:intron | 25.0% |
| !! | TATTTGTGAGTTGAATTTGA+GGG | + | chr8.3:58775284-58775303 | MS.gene45765:intron | 25.0% |
| !! | TCATCTGAAATTGTATGTAA+TGG | + | chr8.3:58774657-58774676 | MS.gene45765:intron | 25.0% |
| !!! | AATTGTGTTTTTGTTTGAGT+CGG | + | chr8.3:58773412-58773431 | MS.gene45765:intron | 25.0% |
| !!! | AGATGATTGTTTTAGTTGTT+TGG | + | chr8.3:58774793-58774812 | MS.gene45765:intron | 25.0% |
| !!! | GTTACTAGAGAATGTTTTAA+AGG | + | chr8.3:58775913-58775932 | MS.gene45765:intron | 25.0% |
| !!! | TCAATTAACGGATTTAAGAT+AGG | + | chr8.3:58774489-58774508 | MS.gene45765:intron | 25.0% |
| !!! | TTATGTCATGTTTTTTCTAG+AGG | + | chr8.3:58775716-58775735 | MS.gene45765:intron | 25.0% |
| AAATTAGTTCCTTATAGAGC+TGG | - | chr8.3:58775685-58775704 | None:intergenic | 30.0% | |
| AATGAACTTTCTCCTATGAA+TGG | - | chr8.3:58773254-58773273 | None:intergenic | 30.0% | |
| ACTAAGATATCCCTATAAGA+AGG | + | chr8.3:58774873-58774892 | MS.gene45765:intron | 30.0% | |
| ACTAGTACTAACACATTTGT+TGG | + | chr8.3:58773206-58773225 | MS.gene45765:intron | 30.0% | |
| ACTAGTAGAGTCAACAAAAT+TGG | - | chr8.3:58773192-58773211 | None:intergenic | 30.0% | |
| ACTTGTAAAATTACTCTGTC+AGG | + | chr8.3:58776082-58776101 | MS.gene45765:intron | 30.0% | |
| AGACTAAAACGATTAACACA+TGG | - | chr8.3:58773112-58773131 | None:intergenic | 30.0% | |
| AGATTCCATCATTTCTTCTT+CGG | - | chr8.3:58774353-58774372 | None:intergenic | 30.0% | |
| ATGAAATGTATAGAGATGAC+TGG | + | chr8.3:58776198-58776217 | MS.gene45765:CDS | 30.0% | |
| CAATATATGTTTCCATACTG+TGG | + | chr8.3:58773703-58773722 | MS.gene45765:CDS | 30.0% | |
| CAATGGATATTAATGCAAGT+AGG | + | chr8.3:58773016-58773035 | MS.gene45765:intron | 30.0% | |
| CCTATGAAAACATATAGATG+TGG | - | chr8.3:58775446-58775465 | None:intergenic | 30.0% | |
| GAAAGTGAAAAGAAAGTGAA+AGG | + | chr8.3:58774823-58774842 | MS.gene45765:intron | 30.0% | |
| GGAAAAACATGTTTGTATAG+TGG | - | chr8.3:58774117-58774136 | None:intergenic | 30.0% | |
| GTAAGAGGAAAGATTGTTAA+AGG | + | chr8.3:58774738-58774757 | MS.gene45765:intron | 30.0% | |
| GTCTGTTAAAGACATTTCAT+TGG | + | chr8.3:58774456-58774475 | MS.gene45765:intron | 30.0% | |
| TAAAGACATATATCGCATCT+TGG | + | chr8.3:58774375-58774394 | MS.gene45765:CDS | 30.0% | |
| TACAGGTTGTGATCTTAATT+GGG | + | chr8.3:58773567-58773586 | MS.gene45765:intron | 30.0% | |
| TCAAAGATCAAAGTGACTAA+TGG | + | chr8.3:58773370-58773389 | MS.gene45765:intron | 30.0% | |
| TGAAATGTATAGAGATGACT+GGG | + | chr8.3:58776199-58776218 | MS.gene45765:CDS | 30.0% | |
| TGTATTAGAGAAAGACACAT+AGG | + | chr8.3:58773143-58773162 | MS.gene45765:intron | 30.0% | |
| TTGACATTCTTTCCTTTGTT+TGG | - | chr8.3:58775194-58775213 | None:intergenic | 30.0% | |
| TTGAGCATTTCTCTAAACAA+TGG | + | chr8.3:58774592-58774611 | MS.gene45765:intron | 30.0% | |
| TTTGGAAAATGTAATGTACC+TGG | - | chr8.3:58772929-58772948 | None:intergenic | 30.0% | |
| ! | AAGCATCGTTCAATTGTTAA+AGG | + | chr8.3:58774560-58774579 | MS.gene45765:intron | 30.0% |
| ! | AATGGAGACTTTTCGTTTAT+AGG | + | chr8.3:58774610-58774629 | MS.gene45765:intron | 30.0% |
| ! | AATTGGTAATTACTACCTAC+AGG | + | chr8.3:58773550-58773569 | MS.gene45765:intron | 30.0% |
| ! | ATATGTTTTCATAGGGAACT+AGG | + | chr8.3:58775451-58775470 | MS.gene45765:intron | 30.0% |
| ! | CCACATCTATATGTTTTCAT+AGG | + | chr8.3:58775443-58775462 | MS.gene45765:intron | 30.0% |
| ! | CGCAGAAACATATTTTGTAT+GGG | + | chr8.3:58775126-58775145 | MS.gene45765:intron | 30.0% |
| ! | GCAGAAACATATTTTGTATG+GGG | + | chr8.3:58775127-58775146 | MS.gene45765:intron | 30.0% |
| ! | GTATTTGTGAGTTGAATTTG+AGG | + | chr8.3:58775283-58775302 | MS.gene45765:intron | 30.0% |
| ! | GTTAAAGGAAAGAAAGTATG+AGG | + | chr8.3:58774753-58774772 | MS.gene45765:intron | 30.0% |
| ! | TATGTTTTCATAGGGAACTA+GGG | + | chr8.3:58775452-58775471 | MS.gene45765:intron | 30.0% |
| ! | TTACTATTCCATTAGTTTCC+AGG | - | chr8.3:58774071-58774090 | None:intergenic | 30.0% |
| ! | TTGTAAAGCATTTGCTTTGT+GGG | + | chr8.3:58775047-58775066 | MS.gene45765:intron | 30.0% |
| ! | TTTGAGATGTCAAATGAACT+AGG | - | chr8.3:58773599-58773618 | None:intergenic | 30.0% |
| !!! | AATCTAGAGATTGTTTTGAC+CGG | + | chr8.3:58775978-58775997 | MS.gene45765:intron | 30.0% |
| !!! | GTTTTTTCTAGAGGAAGTTT+AGG | + | chr8.3:58775725-58775744 | MS.gene45765:intron | 30.0% |
| !!! | TGAAGAAATGCTTCGTTTTT+TGG | + | chr8.3:58772647-58772666 | MS.gene45765:CDS | 30.0% |
| !!! | TTGAATTTGAGGGTTTTGAA+GGG | + | chr8.3:58775294-58775313 | MS.gene45765:intron | 30.0% |
| AAAACCGAATCCACTATTGA+AGG | + | chr8.3:58773658-58773677 | MS.gene45765:CDS | 35.0% | |
| AAACCGAATCCACTATTGAA+GGG | + | chr8.3:58773659-58773678 | MS.gene45765:CDS | 35.0% | |
| AAATCTTCCAAGGCAAATCA+TGG | + | chr8.3:58772563-58772582 | MS.gene45765:CDS | 35.0% | |
| AACTCACAAATACACCCTAA+TGG | - | chr8.3:58775276-58775295 | None:intergenic | 35.0% | |
| AACTTCATACCCTTCAATAG+TGG | - | chr8.3:58773671-58773690 | None:intergenic | 35.0% | |
| AATCTTCCAAGGCAAATCAT+GGG | + | chr8.3:58772564-58772583 | MS.gene45765:CDS | 35.0% | |
| AATTGAGTTACAAGCCAAGT+GGG | + | chr8.3:58774291-58774310 | MS.gene45765:CDS | 35.0% | |
| ATCTTTCCTCTCACTTTCTT+TGG | - | chr8.3:58774717-58774736 | None:intergenic | 35.0% | |
| ATGACTGGGATGATAACTAT+TGG | + | chr8.3:58776213-58776232 | MS.gene45765:CDS | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | + | chr8.3:58773901-58773920 | MS.gene45765:CDS | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8.3:58772354-58772373 | MS.gene45765:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | + | chr8.3:58773845-58773864 | MS.gene45765:CDS | 35.0% | |
| ATTAACACATGGAACAATCC+TGG | - | chr8.3:58773101-58773120 | None:intergenic | 35.0% | |
| ATTAGAGAAAGACACATAGG+CGG | + | chr8.3:58773146-58773165 | MS.gene45765:intron | 35.0% | |
| ATTCCTTTCCTGGAAACTAA+TGG | + | chr8.3:58774060-58774079 | MS.gene45765:CDS | 35.0% | |
| CAATTAAGATCACAACCTGT+AGG | - | chr8.3:58773568-58773587 | None:intergenic | 35.0% | |
| CATCGTTCAATTGTTAAAGG+TGG | + | chr8.3:58774563-58774582 | MS.gene45765:intron | 35.0% | |
| CCAAAACAAACAGACCATTA+GGG | + | chr8.3:58775259-58775278 | MS.gene45765:intron | 35.0% | |
| CTACAGGTTGTGATCTTAAT+TGG | + | chr8.3:58773566-58773585 | MS.gene45765:intron | 35.0% | |
| CTAGTAGGAAAGATTGAAGA+AGG | - | chr8.3:58775233-58775252 | None:intergenic | 35.0% | |
| GAACCAACTCGATAATAGTT+CGG | + | chr8.3:58775488-58775507 | MS.gene45765:intron | 35.0% | |
| GAAGAAGGATAGAAAGTAGT+AGG | - | chr8.3:58775218-58775237 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAACT+TGG | + | chr8.3:58775521-58775540 | MS.gene45765:intron | 35.0% | |
| GACATCTCAAAAGATATTGC+AGG | + | chr8.3:58773608-58773627 | MS.gene45765:CDS | 35.0% | |
| GACTCTACTAAACCATTCAT+AGG | + | chr8.3:58773239-58773258 | MS.gene45765:intron | 35.0% | |
| TAATTGAGTTACAAGCCAAG+TGG | + | chr8.3:58774290-58774309 | MS.gene45765:CDS | 35.0% | |
| TGACTCGATAAGAATTGACT+CGG | - | chr8.3:58775628-58775647 | None:intergenic | 35.0% | |
| TGACTGGGATGATAACTATT+GGG | + | chr8.3:58776214-58776233 | MS.gene45765:CDS | 35.0% | |
| TGATGTGACACGTTAATATG+CGG | - | chr8.3:58775868-58775887 | None:intergenic | 35.0% | |
| TTACCCTGTACAGTGAATTA+TGG | - | chr8.3:58773907-58773926 | None:intergenic | 35.0% | |
| TTGGATGGACAATATGTTGA+TGG | + | chr8.3:58776157-58776176 | MS.gene45765:CDS | 35.0% | |
| TTGTCCATCCAATCTTCTAA+CGG | - | chr8.3:58776149-58776168 | None:intergenic | 35.0% | |
| TTTGATGTGGTTCCAAACAA+AGG | + | chr8.3:58775179-58775198 | MS.gene45765:intron | 35.0% | |
| ! | ACTATTGAAGGGTATGAAGT+TGG | + | chr8.3:58773670-58773689 | MS.gene45765:CDS | 35.0% |
| ! | AGCTGATTCATTCTGAATGA+TGG | - | chr8.3:58776243-58776262 | None:intergenic | 35.0% |
| ! | ATTCCATTAGTTTCCAGGAA+AGG | - | chr8.3:58774066-58774085 | None:intergenic | 35.0% |
| ! | GAAAGTATGAGGAAAGTGAA+TGG | + | chr8.3:58774764-58774783 | MS.gene45765:intron | 35.0% |
| ! | GCGCAGAAACATATTTTGTA+TGG | + | chr8.3:58775125-58775144 | MS.gene45765:intron | 35.0% |
| ! | GTTGTAAAGCATTTGCTTTG+TGG | + | chr8.3:58775046-58775065 | MS.gene45765:intron | 35.0% |
| ! | GTTTGGAACCACATCAAAAT+GGG | - | chr8.3:58775177-58775196 | None:intergenic | 35.0% |
| ! | TATAGCGCAAACCATCATTT+TGG | - | chr8.3:58773472-58773491 | None:intergenic | 35.0% |
| ! | TGTTTGGAACCACATCAAAA+TGG | - | chr8.3:58775178-58775197 | None:intergenic | 35.0% |
| ! | TTTGGAACCACATCAAAATG+GGG | - | chr8.3:58775176-58775195 | None:intergenic | 35.0% |
| !! | ATACCCTTCAATAGTGGATT+CGG | - | chr8.3:58773665-58773684 | None:intergenic | 35.0% |
| !! | CATGTCTTGGTTCTACAAAA+TGG | - | chr8.3:58772827-58772846 | None:intergenic | 35.0% |
| !! | CCTAATGGTCTGTTTGTTTT+GGG | - | chr8.3:58775261-58775280 | None:intergenic | 35.0% |
| !! | GAACTATTATCGAGTTGGTT+CGG | - | chr8.3:58775489-58775508 | None:intergenic | 35.0% |
| !! | GTTGAATTTGAGGGTTTTGA+AGG | + | chr8.3:58775293-58775312 | MS.gene45765:intron | 35.0% |
| !! | TAATATTTCTAGACTTGCCG+TGG | + | chr8.3:58774247-58774266 | MS.gene45765:intron | 35.0% |
| !!! | CGTTTTTTGGAAGAATTTGC+AGG | + | chr8.3:58772660-58772679 | MS.gene45765:CDS | 35.0% |
| !!! | TGTTTTTGGAGTGTATATCC+AGG | - | chr8.3:58772472-58772491 | None:intergenic | 35.0% |
| !!! | TTGTTTTGGGTGAAACTAGT+AGG | - | chr8.3:58775248-58775267 | None:intergenic | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8.3:58774153-58774172 | None:intergenic | 40.0% | |
| AAATACCTGAAACGGACGTA+TGG | - | chr8.3:58774434-58774453 | None:intergenic | 40.0% | |
| ACAGACGCAAATACCTGAAA+CGG | - | chr8.3:58774442-58774461 | None:intergenic | 40.0% | |
| ACCTACCGAAGAAGAAATGA+TGG | + | chr8.3:58774345-58774364 | MS.gene45765:CDS | 40.0% | |
| ACGATTGAAGATAATCGCGT+TGG | + | chr8.3:58774090-58774109 | MS.gene45765:CDS | 40.0% | |
| ACTTCCAGAGACCAAAATGA+TGG | + | chr8.3:58773458-58773477 | MS.gene45765:intron | 40.0% | |
| AGACATATATCGCATCTTGG+AGG | + | chr8.3:58774378-58774397 | MS.gene45765:CDS | 40.0% | |
| AGACTTCTGATGCGTTATCA+GGG | - | chr8.3:58773302-58773321 | None:intergenic | 40.0% | |
| AGATATTGCAGGAGTTGCAA+AGG | + | chr8.3:58773619-58773638 | MS.gene45765:CDS | 40.0% | |
| ATGGAATGAGTGTAACGCTT+GGG | - | chr8.3:58774415-58774434 | None:intergenic | 40.0% | |
| CAAATACCACATTCCTTTCC+TGG | + | chr8.3:58774050-58774069 | MS.gene45765:CDS | 40.0% | |
| CAATGGCATTGCACATGTAT+TGG | + | chr8.3:58775397-58775416 | MS.gene45765:intron | 40.0% | |
| CCCAAAACAAACAGACCATT+AGG | + | chr8.3:58775258-58775277 | MS.gene45765:intron | 40.0% | |
| CGATTGAAGATAATCGCGTT+GGG | + | chr8.3:58774091-58774110 | MS.gene45765:CDS | 40.0% | |
| CGTTGAAGGTGAGAAAATGT+TGG | - | chr8.3:58773939-58773958 | None:intergenic | 40.0% | |
| CTTTACGCACAAATCTTCCA+AGG | + | chr8.3:58772553-58772572 | MS.gene45765:CDS | 40.0% | |
| GAAGAATTTGCAGGTGAGTT+TGG | + | chr8.3:58772669-58772688 | MS.gene45765:CDS | 40.0% | |
| GAAGATTTGTGCGTAAAGAG+TGG | - | chr8.3:58772551-58772570 | None:intergenic | 40.0% | |
| GACTCATTTCCAGCTCTATA+AGG | + | chr8.3:58775673-58775692 | MS.gene45765:intron | 40.0% | |
| GATGCCATAATTCACTGTAC+AGG | + | chr8.3:58773900-58773919 | MS.gene45765:CDS | 40.0% | |
| GGTATGAAGTTGGAAAATGC+TGG | + | chr8.3:58773680-58773699 | MS.gene45765:CDS | 40.0% | |
| GGTCAAAATAGAGTCCCTTA+GGG | + | chr8.3:58774678-58774697 | MS.gene45765:intron | 40.0% | |
| GTGAGAGGAAAGATTGTAAG+AGG | + | chr8.3:58774723-58774742 | MS.gene45765:intron | 40.0% | |
| GTTCCGAACTATTATCGAGT+TGG | - | chr8.3:58775494-58775513 | None:intergenic | 40.0% | |
| GTTGTGATCTTAATTGGGCT+AGG | + | chr8.3:58773572-58773591 | MS.gene45765:CDS | 40.0% | |
| TAAAACTCTTGCAACCCACT+TGG | - | chr8.3:58774308-58774327 | None:intergenic | 40.0% | |
| TAGAAATAGTTTCCTGGCCA+CGG | - | chr8.3:58774267-58774286 | None:intergenic | 40.0% | |
| TAGACTTCTGATGCGTTATC+AGG | - | chr8.3:58773303-58773322 | None:intergenic | 40.0% | |
| TAGTTTCCAGGAAAGGAATG+TGG | - | chr8.3:58774059-58774078 | None:intergenic | 40.0% | |
| TATGGAATGAGTGTAACGCT+TGG | - | chr8.3:58774416-58774435 | None:intergenic | 40.0% | |
| TCACCACCTCTGTTTCAAAT+CGG | - | chr8.3:58772710-58772729 | None:intergenic | 40.0% | |
| TCCATCATTTCTTCTTCGGT+AGG | - | chr8.3:58774349-58774368 | None:intergenic | 40.0% | |
| TCCTCACTATTTCAAAGACC+AGG | + | chr8.3:58772908-58772927 | MS.gene45765:CDS | 40.0% | |
| TGACTACAAACAATGGCTAG+CGG | + | chr8.3:58776106-58776125 | MS.gene45765:CDS | 40.0% | |
| TGGGTCTATACTAAGAGGAT+CGG | - | chr8.3:58772499-58772518 | None:intergenic | 40.0% | |
| TGGTCAAAATAGAGTCCCTT+AGG | + | chr8.3:58774677-58774696 | MS.gene45765:intron | 40.0% | |
| TGGTGAAAGTTGAGAGGAAA+GGG | + | chr8.3:58772724-58772743 | MS.gene45765:CDS | 40.0% | |
| TGTAGAACCAAGACATGCTT+TGG | + | chr8.3:58772830-58772849 | MS.gene45765:CDS | 40.0% | |
| TTGGAACCACATCAAAATGG+GGG | - | chr8.3:58775175-58775194 | None:intergenic | 40.0% | |
| ! | AAGAATCCCATGATTTGCCT+TGG | - | chr8.3:58772573-58772592 | None:intergenic | 40.0% |
| ! | AATATGTTTCTGCGCTCTTG+AGG | - | chr8.3:58775120-58775139 | None:intergenic | 40.0% |
| ! | CAGGTGAGTTTGGAATTCAT+GGG | + | chr8.3:58772679-58772698 | MS.gene45765:CDS | 40.0% |
| ! | CAGTTCAAGTTCAGCTCATT+TGG | - | chr8.3:58775555-58775574 | None:intergenic | 40.0% |
| ! | CCACGAAAGTTTTCAATACC+AGG | - | chr8.3:58772858-58772877 | None:intergenic | 40.0% |
| ! | CCCTAATGGTCTGTTTGTTT+TGG | - | chr8.3:58775262-58775281 | None:intergenic | 40.0% |
| ! | CCTGGTATTGAAAACTTTCG+TGG | + | chr8.3:58772855-58772874 | MS.gene45765:CDS | 40.0% |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr8.3:58772518-58772537 | None:intergenic | 40.0% |
| !! | ACCTGGTCTTTGAAATAGTG+AGG | - | chr8.3:58772912-58772931 | None:intergenic | 40.0% |
| !! | CAAACCATCATTTTGGTCTC+TGG | - | chr8.3:58773465-58773484 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8.3:58772785-58772804 | MS.gene45765:CDS | 40.0% |
| !! | TGGGTTGCAAGAGTTTTATC+TGG | + | chr8.3:58774310-58774329 | MS.gene45765:CDS | 40.0% |
| ACATCAAAATGGGGGAGGAA+AGG | - | chr8.3:58775167-58775186 | None:intergenic | 45.0% | |
| AGGATTCTCGCTTGGACAAA+GGG | - | chr8.3:58772602-58772621 | None:intergenic | 45.0% | |
| CACCACCTCTGTTTCAAATC+GGG | - | chr8.3:58772709-58772728 | None:intergenic | 45.0% | |
| CTGGTTGGGTCTATACTAAG+AGG | - | chr8.3:58772504-58772523 | None:intergenic | 45.0% | |
| GAAAGTTGAGAGGAAAGGGA+AGG | + | chr8.3:58772728-58772747 | MS.gene45765:CDS | 45.0% | |
| GAAGCGGTTGTTGTATGTTC+TGG | + | chr8.3:58772801-58772820 | MS.gene45765:CDS | 45.0% | |
| GACGACGTGTACTAATGAGA+AGG | - | chr8.3:58773331-58773350 | None:intergenic | 45.0% | |
| GGATCACCAAAGAAAGTGAG+AGG | + | chr8.3:58774708-58774727 | MS.gene45765:intron | 45.0% | |
| GTCAGGCTGACTACAAACAA+TGG | + | chr8.3:58776099-58776118 | MS.gene45765:intron | 45.0% | |
| GTGATCCAAACACACCCTAA+GGG | - | chr8.3:58774695-58774714 | None:intergenic | 45.0% | |
| GTGGTGAAAGTTGAGAGGAA+AGG | + | chr8.3:58772723-58772742 | MS.gene45765:CDS | 45.0% | |
| TCATTCCATACGTCCGTTTC+AGG | + | chr8.3:58774426-58774445 | MS.gene45765:CDS | 45.0% | |
| TCCATCCAATCTTCTAACGG+AGG | - | chr8.3:58776146-58776165 | None:intergenic | 45.0% | |
| ! | ACATGTTTTTCCTCCTTCGC+TGG | + | chr8.3:58774125-58774144 | MS.gene45765:CDS | 45.0% |
| ! | ACTGCTGTGAACTGTTTCTC+TGG | - | chr8.3:58772523-58772542 | None:intergenic | 45.0% |
| ! | AGAGGATCGGAGTCTGTTTT+TGG | - | chr8.3:58772486-58772505 | None:intergenic | 45.0% |
| ! | CGAAGCATTTCTTCATGACC+CGG | - | chr8.3:58772642-58772661 | None:intergenic | 45.0% |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr8.3:58772519-58772538 | None:intergenic | 45.0% |
| ! | GCAGGTGAGTTTGGAATTCA+TGG | + | chr8.3:58772678-58772697 | MS.gene45765:CDS | 45.0% |
| ! | GGCTTGGTTGTCTTTGAAGA+TGG | + | chr8.3:58773861-58773880 | MS.gene45765:CDS | 45.0% |
| ! | GTTGACCCGATTTGAAACAG+AGG | + | chr8.3:58772701-58772720 | MS.gene45765:CDS | 45.0% |
| !! | GAGGAAAGGTACTGTTGACT+GGG | - | chr8.3:58775153-58775172 | None:intergenic | 45.0% |
| !! | TTTCCTCCCCCATTTTGATG+TGG | + | chr8.3:58775166-58775185 | MS.gene45765:intron | 45.0% |
| AATGGCTAGCGGCACAGATT+GGG | + | chr8.3:58776117-58776136 | MS.gene45765:CDS | 50.0% | |
| AGAGTCCCTTAGGGTGTGTT+TGG | + | chr8.3:58774687-58774706 | MS.gene45765:intron | 50.0% | |
| AGGACTGGGTTGTTGAGTCT+AGG | + | chr8.3:58772748-58772767 | MS.gene45765:CDS | 50.0% | |
| ATATCCAGGTTCCTCCAACG+CGG | - | chr8.3:58772458-58772477 | None:intergenic | 50.0% | |
| CAGAGGTGGTGAAAGTTGAG+AGG | + | chr8.3:58772718-58772737 | MS.gene45765:CDS | 50.0% | |
| CAGGATTCTCGCTTGGACAA+AGG | - | chr8.3:58772603-58772622 | None:intergenic | 50.0% | |
| CCAGGAACCAAAGCATGTCT+TGG | - | chr8.3:58772840-58772859 | None:intergenic | 50.0% | |
| CTGTGATCCGAGAACGTTTC+CGG | + | chr8.3:58772620-58772639 | MS.gene45765:CDS | 50.0% | |
| GAACCACATCAAAATGGGGG+AGG | - | chr8.3:58775172-58775191 | None:intergenic | 50.0% | |
| GACTGGGTTGTTGAGTCTAG+GGG | + | chr8.3:58772750-58772769 | MS.gene45765:CDS | 50.0% | |
| GCCTCCGTTAGAAGATTGGA+TGG | + | chr8.3:58776142-58776161 | MS.gene45765:CDS | 50.0% | |
| GCTCCATGGCTCTCTTTCAT+TGG | + | chr8.3:58774147-58774166 | MS.gene45765:CDS | 50.0% | |
| GCTCTTGAGGATGGAAAGCA+TGG | - | chr8.3:58775107-58775126 | None:intergenic | 50.0% | |
| GGACTGGGTTGTTGAGTCTA+GGG | + | chr8.3:58772749-58772768 | MS.gene45765:CDS | 50.0% | |
| GGTGATCCAAACACACCCTA+AGG | - | chr8.3:58774696-58774715 | None:intergenic | 50.0% | |
| GGTTGCCTCCGTTAGAAGAT+TGG | + | chr8.3:58776138-58776157 | MS.gene45765:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+CGG | - | chr8.3:58772630-58772649 | None:intergenic | 50.0% | |
| TCTCGAAAACGACGACGTTG+TGG | - | chr8.3:58772428-58772447 | None:intergenic | 50.0% | |
| TGAGAGGAAAGGGAAGGACT+GGG | + | chr8.3:58772734-58772753 | MS.gene45765:CDS | 50.0% | |
| TGTGATCCGAGAACGTTTCC+GGG | + | chr8.3:58772621-58772640 | MS.gene45765:CDS | 50.0% | |
| TTCCTGTTGTAGCTCCTTGG+CGG | - | chr8.3:58772403-58772422 | None:intergenic | 50.0% | |
| TTCGAGAAGAACAACCGCGT+TGG | + | chr8.3:58772441-58772460 | MS.gene45765:CDS | 50.0% | |
| TTGAGAGGAAAGGGAAGGAC+TGG | + | chr8.3:58772733-58772752 | MS.gene45765:CDS | 50.0% | |
| ! | CCAAGACATGCTTTGGTTCC+TGG | + | chr8.3:58772837-58772856 | MS.gene45765:CDS | 50.0% |
| ! | GACCCGATTTGAAACAGAGG+TGG | + | chr8.3:58772704-58772723 | MS.gene45765:CDS | 50.0% |
| ! | GCGGTTGATGTGTGTTCTCA+TGG | + | chr8.3:58773165-58773184 | MS.gene45765:intron | 50.0% |
| ! | TGTTTCTGCGCTCTTGAGGA+TGG | - | chr8.3:58775116-58775135 | None:intergenic | 50.0% |
| !! | GGAGGAAAGGTACTGTTGAC+TGG | - | chr8.3:58775154-58775173 | None:intergenic | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8.3:58772360-58772379 | MS.gene45765:CDS | 55.0% | |
| CAATGGCTAGCGGCACAGAT+TGG | + | chr8.3:58776116-58776135 | MS.gene45765:CDS | 55.0% | |
| CGGAAACGTTCTCGGATCAC+AGG | - | chr8.3:58772622-58772641 | None:intergenic | 55.0% | |
| CGGATCACAGGATTCTCGCT+TGG | - | chr8.3:58772610-58772629 | None:intergenic | 55.0% | |
| GAGAAGAACAACCGCGTTGG+AGG | + | chr8.3:58772444-58772463 | MS.gene45765:CDS | 55.0% | |
| GAGTCGAACTCGTCTGAGCT+CGG | - | chr8.3:58775653-58775672 | None:intergenic | 55.0% | |
| GCCAAGGAGCTACAACAGGA+AGG | + | chr8.3:58772402-58772421 | MS.gene45765:CDS | 55.0% | |
| GCCTTCCTGTTGTAGCTCCT+TGG | - | chr8.3:58772406-58772425 | None:intergenic | 55.0% | |
| TGGGTTGTTGAGTCTAGGGG+AGG | + | chr8.3:58772753-58772772 | MS.gene45765:CDS | 55.0% | |
| TTTCTAGACTTGCCGTGGCC+AGG | + | chr8.3:58774252-58774271 | MS.gene45765:intron | 55.0% | |
| ACAACCGCGTTGGAGGAACC+TGG | + | chr8.3:58772451-58772470 | MS.gene45765:CDS | 60.0% | |
| !! | TTCCTCCTTCGCTGGCTCCA+TGG | + | chr8.3:58774133-58774152 | MS.gene45765:CDS | 60.0% |
| AGCCATGGAGCCAGCGAAGG+AGG | - | chr8.3:58774138-58774157 | None:intergenic | 65.0% | |
| CGCCGCCAAGGAGCTACAAC+AGG | + | chr8.3:58772398-58772417 | MS.gene45765:CDS | 65.0% | |
| GAGAGCCATGGAGCCAGCGA+AGG | - | chr8.3:58774141-58774160 | None:intergenic | 65.0% | |
| GTAGCTCCTTGGCGGCGATG+AGG | - | chr8.3:58772395-58772414 | None:intergenic | 65.0% | |
| CTCCTTGGCGGCGATGAGGC+CGG | - | chr8.3:58772391-58772410 | None:intergenic | 70.0% | |
| GGCGATGAGGCCGGAGACTC+CGG | - | chr8.3:58772382-58772401 | None:intergenic | 70.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr8.3:58772369-58772388 | MS.gene45765:CDS | 70.0% |
| CTCCGGCCTCATCGCCGCCA+AGG | + | chr8.3:58772386-58772405 | MS.gene45765:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 58772354 | 58776268 | 58772354 | ID=MS.gene45765 |
| chr8.3 | mRNA | 58772354 | 58776268 | 58772354 | ID=MS.gene45765.t1;Parent=MS.gene45765 |
| chr8.3 | exon | 58772354 | 58772929 | 58772354 | ID=MS.gene45765.t1.exon1;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58772354 | 58772929 | 58772354 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| chr8.3 | exon | 58773572 | 58773724 | 58773572 | ID=MS.gene45765.t1.exon2;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58773572 | 58773724 | 58773572 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| chr8.3 | exon | 58773840 | 58773922 | 58773840 | ID=MS.gene45765.t1.exon3;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58773840 | 58773922 | 58773840 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| chr8.3 | exon | 58774047 | 58774182 | 58774047 | ID=MS.gene45765.t1.exon4;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58774047 | 58774182 | 58774047 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| chr8.3 | exon | 58774274 | 58774447 | 58774274 | ID=MS.gene45765.t1.exon5;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58774274 | 58774447 | 58774274 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| chr8.3 | exon | 58776104 | 58776268 | 58776104 | ID=MS.gene45765.t1.exon6;Parent=MS.gene45765.t1 |
| chr8.3 | CDS | 58776104 | 58776268 | 58776104 | ID=cds.MS.gene45765.t1;Parent=MS.gene45765.t1 |
| Gene Sequence |
| Protein sequence |
