Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46923.t1 | XP_003609202.1 | 97.6 | 377 | 9 | 0 | 1 | 377 | 34 | 410 | 3.40E-199 | 704.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46923.t1 | Q1EBV7 | 87.2 | 351 | 44 | 1 | 28 | 377 | 59 | 409 | 3.5e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46923.t1 | G7JU57 | 97.6 | 377 | 9 | 0 | 1 | 377 | 34 | 410 | 2.5e-199 | 704.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051244 | MS.gene46923 | 0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene055971 | MS.gene46923 | 0.846276 | 2.40E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene46923 | 0.844447 | 7.52E-59 | -1.69E-46 |
| MS.gene060557 | MS.gene46923 | 0.986876 | 2.81E-168 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 85 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCATTTGCTATTGGTTAT+TGG | 0.150047 | 8.4:+15585711 | MS.gene46923:CDS |
| TGATGACAAAGACGACTTTA+AGG | 0.192231 | 8.4:+15586509 | MS.gene46923:CDS |
| GGGTTTCCTCATGCTGTCTA+TGG | 0.198961 | 8.4:+15583377 | MS.gene46923:CDS |
| TCTTGCAACTGGTCTTATTT+TGG | 0.200101 | 8.4:+15584113 | MS.gene46923:CDS |
| CATGCTGCTGCATTTGCTAT+TGG | 0.299073 | 8.4:+15585704 | MS.gene46923:CDS |
| TTCTACAGGTGTTCAACTAT+TGG | 0.338192 | 8.4:+15584859 | MS.gene46923:intron |
| TTGTATGCGCAGGTCATCTT+GGG | 0.340243 | 8.4:+15583194 | MS.gene46923:intron |
| TGCATTTAGAAGTGAGTTGC+AGG | 0.346099 | 8.4:+15581638 | MS.gene46923:CDS |
| TCTTTGTCATCAACGGGAAT+TGG | 0.350500 | 8.4:-15586498 | None:intergenic |
| TAGTCCATCTAGCGTCAAAA+AGG | 0.368389 | 8.4:+15581700 | MS.gene46923:CDS |
| GACCTATTTACTCTTGGCTT+GGG | 0.369788 | 8.4:+15583357 | MS.gene46923:CDS |
| TTCTCAGACACTAAAACTTT+CGG | 0.372149 | 8.4:+15584086 | MS.gene46923:intron |
| CTTGTATGCGCAGGTCATCT+TGG | 0.374061 | 8.4:+15583193 | MS.gene46923:intron |
| ATCTTACCTCCCACAATTGT+AGG | 0.403675 | 8.4:-15585257 | None:intergenic |
| GATTATCTTTGAAGTGAACT+TGG | 0.415890 | 8.4:-15585440 | None:intergenic |
| AAGTCGTCTTTGTCATCAAC+GGG | 0.418041 | 8.4:-15586504 | None:intergenic |
| AACCCAAGCCAAGAGTAAAT+AGG | 0.419662 | 8.4:-15583359 | None:intergenic |
| TTAGCACCAGTAGCAACAAT+TGG | 0.423758 | 8.4:-15581669 | None:intergenic |
| GGTTTCCTCATGCTGTCTAT+GGG | 0.424749 | 8.4:+15583378 | MS.gene46923:CDS |
| CTCGTGTTGTCCTGGAGGTC+AGG | 0.424832 | 8.4:+15584137 | MS.gene46923:CDS |
| TGGATGTCAAGAATATCATT+TGG | 0.431918 | 8.4:+15585731 | MS.gene46923:CDS |
| GGAGTGCTCTAGCTGTGTAT+TGG | 0.435900 | 8.4:+15586466 | MS.gene46923:CDS |
| GAACTTACAGCAGCATCAAC+AGG | 0.438663 | 8.4:-15584934 | None:intergenic |
| CTTTCGGCTCCTCTTGCAAC+TGG | 0.440648 | 8.4:+15584102 | MS.gene46923:CDS |
| TCAGCTTCAACAAACATATC+TGG | 0.448870 | 8.4:+15583009 | MS.gene46923:CDS |
| ATCTATCGAGTGTGGGATGC+AGG | 0.454978 | 8.4:+15585775 | MS.gene46923:CDS |
| CCAGTAGCAACAATTGGATT+AGG | 0.455683 | 8.4:-15581663 | None:intergenic |
| TTTATTTCAGGTAACTTGGT+TGG | 0.456017 | 8.4:+15583329 | MS.gene46923:intron |
| AAGACAGTTCTTACAGCAGC+TGG | 0.466585 | 8.4:-15583239 | None:intergenic |
| CCTAATCCAATTGTTGCTAC+TGG | 0.467233 | 8.4:+15581663 | MS.gene46923:CDS |
| ACATTTGATGCCTGACCTCC+AGG | 0.471096 | 8.4:-15584147 | None:intergenic |
| GAGACAGACCTATTTACTCT+TGG | 0.473070 | 8.4:+15583351 | MS.gene46923:CDS |
| GAGATGTTCCTGAAAGTGCT+GGG | 0.473507 | 8.4:+15583031 | MS.gene46923:CDS |
| TGCTGTCAGTGTTGTCTGCA+TGG | 0.473678 | 8.4:+15586319 | MS.gene46923:CDS |
| TGACTTTATTTCAGGTAACT+TGG | 0.475397 | 8.4:+15583325 | MS.gene46923:intron |
| GGAGATGTTCCTGAAAGTGC+TGG | 0.475562 | 8.4:+15583030 | MS.gene46923:CDS |
| AGCCTTAGACTTACCCAAAC+GGG | 0.475608 | 8.4:-15583102 | None:intergenic |
| AGACCTATTTACTCTTGGCT+TGG | 0.477469 | 8.4:+15583356 | MS.gene46923:CDS |
| ATCACGGTCACACCTTTGAT+AGG | 0.479069 | 8.4:+15585460 | MS.gene46923:CDS |
| AGAGAGAGCAACGTTTCCCT+TGG | 0.489152 | 8.4:-15584184 | None:intergenic |
| TGTTTGCAGAGCTCTGCACT+TGG | 0.497307 | 8.4:+15586245 | MS.gene46923:intron |
| GTGCTCTAGCTGTGTATTGG+AGG | 0.507859 | 8.4:+15586469 | MS.gene46923:CDS |
| ATTATCTTTGAAGTGAACTT+GGG | 0.524375 | 8.4:-15585439 | None:intergenic |
| CTCCTAACGAAGCTTCTAGC+TGG | 0.529020 | 8.4:+15584901 | MS.gene46923:CDS |
| GACCAGCTAGAAGCTTCGTT+AGG | 0.533754 | 8.4:-15584903 | None:intergenic |
| TCTTACCTCCCACAATTGTA+GGG | 0.534398 | 8.4:-15585256 | None:intergenic |
| TATTTGATCAAGCCCGTGCT+AGG | 0.535455 | 8.4:+15583561 | MS.gene46923:CDS |
| CTGCCGTAATGCAGCTTGGT+GGG | 0.539439 | 8.4:+15586445 | MS.gene46923:intron |
| CTTGAAAGGTGCTAATTGCC+AGG | 0.540089 | 8.4:-15585223 | None:intergenic |
| TGTTTGTCCCTTACAGTCCA+CGG | 0.554456 | 8.4:-15583444 | None:intergenic |
| TGTTGCAACATACATATCCA+AGG | 0.564619 | 8.4:+15584167 | MS.gene46923:CDS |
| AAGCCTTAGACTTACCCAAA+CGG | 0.566589 | 8.4:-15583103 | None:intergenic |
| AAAGTCGTCTTTGTCATCAA+CGG | 0.567068 | 8.4:-15586505 | None:intergenic |
| GACGATGTCTGCGAAATCCG+TGG | 0.569012 | 8.4:+15583427 | MS.gene46923:CDS |
| ACTGCCGTAATGCAGCTTGG+TGG | 0.570730 | 8.4:+15586444 | MS.gene46923:intron |
| CGCACAATATCTATCGAGTG+TGG | 0.573334 | 8.4:+15585767 | MS.gene46923:CDS |
| AGGGACTAAAACAACTTGAA+AGG | 0.575131 | 8.4:-15585237 | None:intergenic |
| GCAGCATGTAAAGCAAGGAC+TGG | 0.578322 | 8.4:-15585689 | None:intergenic |
| GTCAGAATAACTCCTATCAA+AGG | 0.579554 | 8.4:-15585472 | None:intergenic |
| GCTAGAAGCTTCGTTAGGAG+TGG | 0.586839 | 8.4:-15584898 | None:intergenic |
| CAGACAACACTGACAGCAGA+AGG | 0.589026 | 8.4:-15586314 | None:intergenic |
| GCATTTAGAAGTGAGTTGCA+GGG | 0.593011 | 8.4:+15581639 | MS.gene46923:CDS |
| TGTATGCGCAGGTCATCTTG+GGG | 0.596551 | 8.4:+15583195 | MS.gene46923:intron |
| AGATGTTCCTGAAAGTGCTG+GGG | 0.599940 | 8.4:+15583032 | MS.gene46923:CDS |
| TTGGTCTCGTGTTGTCCTGG+AGG | 0.601309 | 8.4:+15584132 | MS.gene46923:CDS |
| TACTGGGCTTGCACAAAGGA+GGG | 0.601541 | 8.4:-15585497 | None:intergenic |
| TTACTGGGCTTGCACAAAGG+AGG | 0.605677 | 8.4:-15585498 | None:intergenic |
| GATAGATATTGTGCGTGATG+TGG | 0.609427 | 8.4:-15585759 | None:intergenic |
| AAAATAAGACCAGTTGCAAG+AGG | 0.609602 | 8.4:-15584111 | None:intergenic |
| ATGCAGCAGCATGTAAAGCA+AGG | 0.610129 | 8.4:-15585694 | None:intergenic |
| AGGAACAGCTACAAGTGGGT+TGG | 0.613007 | 8.4:-15586294 | None:intergenic |
| GTATGCGCAGGTCATCTTGG+GGG | 0.613520 | 8.4:+15583196 | MS.gene46923:intron |
| GATGTTCCTGAAAGTGCTGG+GGG | 0.615383 | 8.4:+15583033 | MS.gene46923:CDS |
| GCAGAAGGAACAGCTACAAG+TGG | 0.624409 | 8.4:-15586299 | None:intergenic |
| TCAAACCCATAGACAGCATG+AGG | 0.627326 | 8.4:-15583383 | None:intergenic |
| GCACAATATCTATCGAGTGT+GGG | 0.631842 | 8.4:+15585768 | MS.gene46923:CDS |
| GTTCACTTCAAAGATAATCA+CGG | 0.634653 | 8.4:+15585444 | MS.gene46923:CDS |
| AACTTACTGGGCTTGCACAA+AGG | 0.635521 | 8.4:-15585501 | None:intergenic |
| TTAGTCCCTACAATTGTGGG+AGG | 0.636420 | 8.4:+15585251 | MS.gene46923:CDS |
| GTTGCAACATACATATCCAA+GGG | 0.644060 | 8.4:+15584168 | MS.gene46923:CDS |
| TTTGACGCTAGATGGACTAA+GGG | 0.646699 | 8.4:-15581696 | None:intergenic |
| CAGAAGGAACAGCTACAAGT+GGG | 0.665602 | 8.4:-15586298 | None:intergenic |
| TGGGCTTGCACAAAGGAGGG+TGG | 0.682947 | 8.4:-15585494 | None:intergenic |
| CAGCTGGCTTGTAAATACCG+AGG | 0.715500 | 8.4:-15583223 | None:intergenic |
| TGTCAGTGTTGTCTGCATGG+CGG | 0.751349 | 8.4:+15586322 | MS.gene46923:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATACAAAATACAT+AGG | - | chr8.4:15584256-15584275 | None:intergenic | 10.0% |
| !! | ATATATATAAAAGATACAAT+GGG | - | chr8.4:15585149-15585168 | None:intergenic | 10.0% |
| !! | TATATATATAAAAGATACAA+TGG | - | chr8.4:15585150-15585169 | None:intergenic | 10.0% |
| !!! | TAAATTTTTGATATTTTTAC+TGG | + | chr8.4:15582901-15582920 | MS.gene46923:intron | 10.0% |
| !! | AAATTATTAATCTATTGATC+TGG | - | chr8.4:15586085-15586104 | None:intergenic | 15.0% |
| !! | TAAATTAGAAACCAATTATA+TGG | + | chr8.4:15584432-15584451 | MS.gene46923:intron | 15.0% |
| !!! | AATGTTTTTGCTTTATTATT+TGG | + | chr8.4:15585393-15585412 | MS.gene46923:intron | 15.0% |
| !!! | ATTAACTTTTTCAAATGATT+AGG | - | chr8.4:15585095-15585114 | None:intergenic | 15.0% |
| !!! | TAGGAATTTTAATTTAAAGT+AGG | + | chr8.4:15582227-15582246 | MS.gene46923:intron | 15.0% |
| !!! | TTACTATTTTACCATATAAT+TGG | - | chr8.4:15584446-15584465 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTATTTTTTCTC+TGG | + | chr8.4:15584262-15584281 | MS.gene46923:intron | 15.0% |
| !! | AATAAATCATAATTAGTGGT+AGG | - | chr8.4:15583505-15583524 | None:intergenic | 20.0% |
| !! | AATAGTAAAACTTATAGGAT+TGG | + | chr8.4:15584458-15584477 | MS.gene46923:intron | 20.0% |
| !! | AATGAAAATCAGAAAAACAA+AGG | + | chr8.4:15582800-15582819 | MS.gene46923:intron | 20.0% |
| !! | ACACAATAAATCATAATTAG+TGG | - | chr8.4:15583509-15583528 | None:intergenic | 20.0% |
| !! | ATATACATTACCACAAATTT+AGG | - | chr8.4:15584570-15584589 | None:intergenic | 20.0% |
| !! | ATATTAATTGTAAGTGCTTT+AGG | + | chr8.4:15586192-15586211 | MS.gene46923:intron | 20.0% |
| !! | ATTCTGATTTATTTCATTGA+TGG | + | chr8.4:15582663-15582682 | MS.gene46923:intron | 20.0% |
| !! | CATTTGAAAAAGTTAATATC+TGG | + | chr8.4:15585098-15585117 | MS.gene46923:intron | 20.0% |
| !! | GGTAAAATAGTAAAACTTAT+AGG | + | chr8.4:15584453-15584472 | MS.gene46923:intron | 20.0% |
| !! | TGGTAATTCAAAATATAACA+GGG | - | chr8.4:15583675-15583694 | None:intergenic | 20.0% |
| !! | TTAGAAGTTACATTACTTAA+TGG | - | chr8.4:15582517-15582536 | None:intergenic | 20.0% |
| !! | TTCTGATTTATTTCATTGAT+GGG | + | chr8.4:15582664-15582683 | MS.gene46923:intron | 20.0% |
| !! | TTGACAAAAAATGAAATAAC+TGG | + | chr8.4:15581784-15581803 | MS.gene46923:intron | 20.0% |
| !!! | TATTAGGATGTATGTTTTTT+AGG | + | chr8.4:15585842-15585861 | MS.gene46923:intron | 20.0% |
| !!! | TATTGTTATGACTTTATTTC+AGG | + | chr8.4:15583317-15583336 | MS.gene46923:intron | 20.0% |
| !!! | TTAATTTAAAGTAGGAACAA+GGG | + | chr8.4:15582235-15582254 | MS.gene46923:intron | 20.0% |
| !!! | TTTAATTTAAAGTAGGAACA+AGG | + | chr8.4:15582234-15582253 | MS.gene46923:intron | 20.0% |
| !!! | TTTCAATAATTTTCTCATAC+TGG | - | chr8.4:15583065-15583084 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTAATTGTTGAA+TGG | + | chr8.4:15582053-15582072 | MS.gene46923:intron | 20.0% |
| ! | ACAGAACAAATAAATAGAAG+TGG | - | chr8.4:15583915-15583934 | None:intergenic | 25.0% |
| ! | ACATAGCTAGTTATTTATTG+AGG | + | chr8.4:15583810-15583829 | MS.gene46923:intron | 25.0% |
| ! | ACCAAGAACTTTAATCTAAA+AGG | - | chr8.4:15582195-15582214 | None:intergenic | 25.0% |
| ! | AGCTATTTGTAGAATTAAGA+GGG | - | chr8.4:15585807-15585826 | None:intergenic | 25.0% |
| ! | ATCAGAAAAACAAAGGAAAA+TGG | + | chr8.4:15582807-15582826 | MS.gene46923:intron | 25.0% |
| ! | ATGACATTGAACTAAATTTC+TGG | + | chr8.4:15586108-15586127 | MS.gene46923:intron | 25.0% |
| ! | ATTATACCAAAGTAAACTGT+TGG | - | chr8.4:15585565-15585584 | None:intergenic | 25.0% |
| ! | ATTATATATACCTATGGAGT+TGG | + | chr8.4:15585883-15585902 | MS.gene46923:intron | 25.0% |
| ! | ATTGATATAATCTATCTTGC+CGG | + | chr8.4:15582618-15582637 | MS.gene46923:intron | 25.0% |
| ! | CAATCAAAATCAACTTGTAT+GGG | - | chr8.4:15584393-15584412 | None:intergenic | 25.0% |
| ! | CTACTGAACAATTAAGAAAT+TGG | - | chr8.4:15583152-15583171 | None:intergenic | 25.0% |
| ! | CTTATTGTTCTGTATAAGTT+AGG | + | chr8.4:15582870-15582889 | MS.gene46923:intron | 25.0% |
| ! | GAAAAAGTTAATATCTGGAT+AGG | + | chr8.4:15585103-15585122 | MS.gene46923:intron | 25.0% |
| ! | GAAGTTAATGTTAGCAAATT+TGG | - | chr8.4:15584063-15584082 | None:intergenic | 25.0% |
| ! | GAGACAAATATTTGAAAGAT+TGG | + | chr8.4:15583976-15583995 | MS.gene46923:intron | 25.0% |
| ! | GTATACCTAAAATTCAGAAA+TGG | - | chr8.4:15582563-15582582 | None:intergenic | 25.0% |
| ! | GTGGTAATTCAAAATATAAC+AGG | - | chr8.4:15583676-15583695 | None:intergenic | 25.0% |
| ! | TAAGAAATTGGAAAGATGTT+AGG | - | chr8.4:15583140-15583159 | None:intergenic | 25.0% |
| ! | TCAATCAAAATCAACTTGTA+TGG | - | chr8.4:15584394-15584413 | None:intergenic | 25.0% |
| ! | TGACATTGAACTAAATTTCT+GGG | + | chr8.4:15586109-15586128 | MS.gene46923:intron | 25.0% |
| ! | TGATAACAATCATAAGTCAA+TGG | - | chr8.4:15583731-15583750 | None:intergenic | 25.0% |
| ! | TGTTGTTGAGTACAAATATT+AGG | + | chr8.4:15585826-15585845 | MS.gene46923:intron | 25.0% |
| ! | TTATATGTGTTAGAGTTTGT+TGG | + | chr8.4:15585294-15585313 | MS.gene46923:intron | 25.0% |
| ! | TTCTAGTAATTGAAGTTTGA+TGG | + | chr8.4:15581970-15581989 | MS.gene46923:intron | 25.0% |
| !! | ATATAACTATGTGCTTTTCA+AGG | + | chr8.4:15582687-15582706 | MS.gene46923:intron | 25.0% |
| !! | ATGCTGATTATATATACCTA+TGG | + | chr8.4:15585877-15585896 | MS.gene46923:intron | 25.0% |
| !! | TCTTTGATAACAATCTTATG+TGG | - | chr8.4:15583695-15583714 | None:intergenic | 25.0% |
| !!! | ATGATTTATTGTGTTTTTGC+AGG | + | chr8.4:15583515-15583534 | MS.gene46923:intron | 25.0% |
| !!! | ATTATCTTTGAAGTGAACTT+GGG | - | chr8.4:15585442-15585461 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTTTGATTGAAT+TGG | + | chr8.4:15584396-15584415 | MS.gene46923:intron | 25.0% |
| !!! | GACATTTTTTTTCCTTTTCT+CGG | + | chr8.4:15586353-15586372 | MS.gene46923:intron | 25.0% |
| !!! | TATTTATTGAGGCCATTTTT+GGG | + | chr8.4:15583821-15583840 | MS.gene46923:intron | 25.0% |
| !!! | TATTTTTTCTCTGGCTTATT+TGG | + | chr8.4:15584271-15584290 | MS.gene46923:intron | 25.0% |
| !!! | TCTTGGTTCTATTTTAAAGT+AGG | + | chr8.4:15582208-15582227 | MS.gene46923:intron | 25.0% |
| !!! | TGTATGTTTTTTAGGCTTTT+AGG | + | chr8.4:15585850-15585869 | MS.gene46923:intron | 25.0% |
| !!! | TTATTTATTGAGGCCATTTT+TGG | + | chr8.4:15583820-15583839 | MS.gene46923:intron | 25.0% |
| !!! | TTTAACTTGTTCAACTTACT+GGG | - | chr8.4:15585516-15585535 | None:intergenic | 25.0% |
| !!! | TTTATTAACAGCTTGCTAAT+AGG | - | chr8.4:15585033-15585052 | None:intergenic | 25.0% |
| AAAATTAGCATTAACAGTCG+TGG | - | chr8.4:15582448-15582467 | None:intergenic | 30.0% | |
| AAATCATAATTAGTGGTAGG+AGG | - | chr8.4:15583502-15583521 | None:intergenic | 30.0% | |
| AAGCTAAAATAACTTCATCC+AGG | - | chr8.4:15584744-15584763 | None:intergenic | 30.0% | |
| AATACATAGGAAACCAAACA+AGG | - | chr8.4:15584243-15584262 | None:intergenic | 30.0% | |
| ACTTGTTTATTGCTATGTCT+AGG | + | chr8.4:15582968-15582987 | MS.gene46923:intron | 30.0% | |
| AGACAATGTCATATAGTAGT+TGG | - | chr8.4:15582844-15582863 | None:intergenic | 30.0% | |
| AGCAATCTATGGTAAAATTC+CGG | - | chr8.4:15582640-15582659 | None:intergenic | 30.0% | |
| AGCTAAAATAACTTCATCCA+GGG | - | chr8.4:15584743-15584762 | None:intergenic | 30.0% | |
| AGGTATGGTTCTTAATGATT+AGG | + | chr8.4:15585359-15585378 | MS.gene46923:intron | 30.0% | |
| AGGTGTTTGCAAATTGAATA+GGG | - | chr8.4:15584512-15584531 | None:intergenic | 30.0% | |
| ATATCTGGATAGGATACTTT+CGG | + | chr8.4:15585113-15585132 | MS.gene46923:intron | 30.0% | |
| CAATTTGCAAACACCTAAAA+AGG | + | chr8.4:15584516-15584535 | MS.gene46923:intron | 30.0% | |
| CAGCTATTTGTAGAATTAAG+AGG | - | chr8.4:15585808-15585827 | None:intergenic | 30.0% | |
| CTATTTGTAGAATTAAGAGG+GGG | - | chr8.4:15585805-15585824 | None:intergenic | 30.0% | |
| GACATTGAACTAAATTTCTG+GGG | + | chr8.4:15586110-15586129 | MS.gene46923:intron | 30.0% | |
| GATGTCAATCTTCTGTAATT+TGG | - | chr8.4:15586040-15586059 | None:intergenic | 30.0% | |
| GCTATTTGTAGAATTAAGAG+GGG | - | chr8.4:15585806-15585825 | None:intergenic | 30.0% | |
| GTACAAACACTTCATATTGA+AGG | - | chr8.4:15581865-15581884 | None:intergenic | 30.0% | |
| GTTACGAGTTAGCTAATTTA+GGG | + | chr8.4:15582026-15582045 | MS.gene46923:intron | 30.0% | |
| GTTCACTTCAAAGATAATCA+CGG | + | chr8.4:15585444-15585463 | MS.gene46923:CDS | 30.0% | |
| TACCTAAAATTCAGAAATGG+AGG | - | chr8.4:15582560-15582579 | None:intergenic | 30.0% | |
| TAGCAAATTTGGCATGATAT+AGG | - | chr8.4:15584052-15584071 | None:intergenic | 30.0% | |
| TAGGTGTTTGCAAATTGAAT+AGG | - | chr8.4:15584513-15584532 | None:intergenic | 30.0% | |
| TCCCTTTCATGCATAAAAAT+AGG | - | chr8.4:15584967-15584986 | None:intergenic | 30.0% | |
| TGGATGTCAAGAATATCATT+TGG | + | chr8.4:15585731-15585750 | MS.gene46923:CDS | 30.0% | |
| TGTTAAAGATCCTGTATGAA+GGG | + | chr8.4:15582111-15582130 | MS.gene46923:intron | 30.0% | |
| TTATTCCAGGAAGAAAAGAA+TGG | - | chr8.4:15582729-15582748 | None:intergenic | 30.0% | |
| TTCTCAGACACTAAAACTTT+CGG | + | chr8.4:15584086-15584105 | MS.gene46923:intron | 30.0% | |
| TTGATTGAATTGGATCAGAT+CGG | + | chr8.4:15584406-15584425 | MS.gene46923:intron | 30.0% | |
| TTTGTTTAAATTCCGCTATG+TGG | - | chr8.4:15582408-15582427 | None:intergenic | 30.0% | |
| ! | AAAGTAAACTGTTGGCTAAA+AGG | - | chr8.4:15585557-15585576 | None:intergenic | 30.0% |
| ! | AAGTAAACTGTTGGCTAAAA+GGG | - | chr8.4:15585556-15585575 | None:intergenic | 30.0% |
| ! | ATCCTCCATTTCTGAATTTT+AGG | + | chr8.4:15582555-15582574 | MS.gene46923:intron | 30.0% |
| ! | CAGAACGAACATAATTTTTC+AGG | - | chr8.4:15585968-15585987 | None:intergenic | 30.0% |
| ! | CATGTTATTTACCATTCTAC+AGG | + | chr8.4:15584845-15584864 | MS.gene46923:intron | 30.0% |
| ! | CGTCTTTTCAAATGACAAAA+GGG | - | chr8.4:15582085-15582104 | None:intergenic | 30.0% |
| ! | GAATTTTACCATAGATTGCT+AGG | + | chr8.4:15582640-15582659 | MS.gene46923:intron | 30.0% |
| ! | GCATTTAAGTTCTTTATTCC+AGG | - | chr8.4:15582742-15582761 | None:intergenic | 30.0% |
| ! | GCCTTTTAGATTAAAGTTCT+TGG | + | chr8.4:15582191-15582210 | MS.gene46923:intron | 30.0% |
| ! | TGACTTTATTTCAGGTAACT+TGG | + | chr8.4:15583325-15583344 | MS.gene46923:intron | 30.0% |
| ! | TTTATTTCAGGTAACTTGGT+TGG | + | chr8.4:15583329-15583348 | MS.gene46923:intron | 30.0% |
| ! | TTTTAGCCAACAGTTTACTT+TGG | + | chr8.4:15585556-15585575 | MS.gene46923:intron | 30.0% |
| !! | AGAAGTTGTTTTCAGAAATC+AGG | + | chr8.4:15584815-15584834 | MS.gene46923:intron | 30.0% |
| !! | ATTTATTGTGTTTTTGCAGG+TGG | + | chr8.4:15583518-15583537 | MS.gene46923:intron | 30.0% |
| !! | CCTTTTGTCATTTGAAAAGA+CGG | + | chr8.4:15582083-15582102 | MS.gene46923:intron | 30.0% |
| !! | CTTTAACTTGTTCAACTTAC+TGG | - | chr8.4:15585517-15585536 | None:intergenic | 30.0% |
| !! | CTTTTGTCATTTGAAAAGAC+GGG | + | chr8.4:15582084-15582103 | MS.gene46923:intron | 30.0% |
| !! | GATTATCTTTGAAGTGAACT+TGG | - | chr8.4:15585443-15585462 | None:intergenic | 30.0% |
| !! | GCTTTATTATTTGGCAGTTT+TGG | + | chr8.4:15585402-15585421 | MS.gene46923:intron | 30.0% |
| !! | TTAACTTGCATTTCCTTGTT+TGG | + | chr8.4:15584227-15584246 | MS.gene46923:intron | 30.0% |
| !! | TTTATTGTGTTTTTGCAGGT+GGG | + | chr8.4:15583519-15583538 | MS.gene46923:intron | 30.0% |
| !!! | ATGTATTGACTTTTCAGATC+GGG | + | chr8.4:15585621-15585640 | MS.gene46923:intron | 30.0% |
| !!! | CATGTATTGACTTTTCAGAT+CGG | + | chr8.4:15585620-15585639 | MS.gene46923:intron | 30.0% |
| !!! | GCCTATTTTTATGCATGAAA+GGG | + | chr8.4:15584963-15584982 | MS.gene46923:intron | 30.0% |
| !!! | TGCCTATTTTTATGCATGAA+AGG | + | chr8.4:15584962-15584981 | MS.gene46923:intron | 30.0% |
| AAAATAAGACCAGTTGCAAG+AGG | - | chr8.4:15584114-15584133 | None:intergenic | 35.0% | |
| AAAGTCGTCTTTGTCATCAA+CGG | - | chr8.4:15586508-15586527 | None:intergenic | 35.0% | |
| AAATCAACTTGTATGGGATC+AGG | - | chr8.4:15584387-15584406 | None:intergenic | 35.0% | |
| AACACTGCATATCCCAAAAA+TGG | - | chr8.4:15583836-15583855 | None:intergenic | 35.0% | |
| AAGCAATTACAGATAACCTC+AGG | + | chr8.4:15582473-15582492 | MS.gene46923:intron | 35.0% | |
| AATTACTCTTGTGTGTGTCA+TGG | + | chr8.4:15584697-15584716 | MS.gene46923:intron | 35.0% | |
| AGGGACTAAAACAACTTGAA+AGG | - | chr8.4:15585240-15585259 | None:intergenic | 35.0% | |
| ATAACTGGATGTAACCAAGA+TGG | + | chr8.4:15581799-15581818 | MS.gene46923:intron | 35.0% | |
| ATAGTTGAACACCTGTAGAA+TGG | - | chr8.4:15584859-15584878 | None:intergenic | 35.0% | |
| ATATGCAGTGTTTCTTTGTG+TGG | + | chr8.4:15583844-15583863 | MS.gene46923:intron | 35.0% | |
| ATCAGAATCCTAGCAATCTA+TGG | - | chr8.4:15582651-15582670 | None:intergenic | 35.0% | |
| ATCATATAGTGCTTTGTACC+TGG | + | chr8.4:15583775-15583794 | MS.gene46923:intron | 35.0% | |
| ATTGTTCAGTAGTTGAAAGC+TGG | + | chr8.4:15583160-15583179 | MS.gene46923:intron | 35.0% | |
| CAAACAACAAGAAAAGCTAG+AGG | - | chr8.4:15586010-15586029 | None:intergenic | 35.0% | |
| CAAACACACACCTAAATTTG+TGG | + | chr8.4:15584557-15584576 | MS.gene46923:intron | 35.0% | |
| CACAAATTTAGGTGTGTGTT+TGG | - | chr8.4:15584559-15584578 | None:intergenic | 35.0% | |
| CGTGTTTGAAGAGGATATTT+AGG | - | chr8.4:15584649-15584668 | None:intergenic | 35.0% | |
| CTGTTAAAGATCCTGTATGA+AGG | + | chr8.4:15582110-15582129 | MS.gene46923:intron | 35.0% | |
| CTTACTGAGAATTATGGAGA+GGG | + | chr8.4:15581922-15581941 | MS.gene46923:intron | 35.0% | |
| GCATAGCTTATACAAGCAAT+GGG | + | chr8.4:15581886-15581905 | MS.gene46923:intron | 35.0% | |
| GGTTACGAGTTAGCTAATTT+AGG | + | chr8.4:15582025-15582044 | MS.gene46923:intron | 35.0% | |
| GTCAATCTTCTGTAATTTGG+CGG | - | chr8.4:15586037-15586056 | None:intergenic | 35.0% | |
| GTCAGAATAACTCCTATCAA+AGG | - | chr8.4:15585475-15585494 | None:intergenic | 35.0% | |
| GTGCAAATACTGTCAAGTAA+CGG | + | chr8.4:15582371-15582390 | MS.gene46923:intron | 35.0% | |
| GTTGCAACATACATATCCAA+GGG | + | chr8.4:15584168-15584187 | MS.gene46923:CDS | 35.0% | |
| TATACTAATGTGTCTCCACT+TGG | + | chr8.4:15585332-15585351 | MS.gene46923:intron | 35.0% | |
| TATGCAGTGTTTCTTTGTGT+GGG | + | chr8.4:15583845-15583864 | MS.gene46923:intron | 35.0% | |
| TCAGCTTCAACAAACATATC+TGG | + | chr8.4:15583009-15583028 | MS.gene46923:CDS | 35.0% | |
| TCTGTATAAGTTAGGTACTC+TGG | + | chr8.4:15582878-15582897 | MS.gene46923:intron | 35.0% | |
| TGATGACAAAGACGACTTTA+AGG | + | chr8.4:15586509-15586528 | MS.gene46923:CDS | 35.0% | |
| TGCATAGCTTATACAAGCAA+TGG | + | chr8.4:15581885-15581904 | MS.gene46923:intron | 35.0% | |
| TGTTGCAACATACATATCCA+AGG | + | chr8.4:15584167-15584186 | MS.gene46923:CDS | 35.0% | |
| TTCTACAGGTGTTCAACTAT+TGG | + | chr8.4:15584859-15584878 | MS.gene46923:intron | 35.0% | |
| ! | ATTACCTTTTTGACGCTAGA+TGG | - | chr8.4:15581707-15581726 | None:intergenic | 35.0% |
| ! | CCGTCTTTTCAAATGACAAA+AGG | - | chr8.4:15582086-15582105 | None:intergenic | 35.0% |
| ! | CTAGTCCATAATCTTTGAGA+CGG | - | chr8.4:15582598-15582617 | None:intergenic | 35.0% |
| ! | GTAATTGAAGTTTGATGGAC+TGG | + | chr8.4:15581975-15581994 | MS.gene46923:intron | 35.0% |
| ! | TGAACTAAATTTCTGGGGAA+GGG | + | chr8.4:15586115-15586134 | MS.gene46923:intron | 35.0% |
| ! | TGGCTTATTTGGTTGCTATT+TGG | + | chr8.4:15584282-15584301 | MS.gene46923:intron | 35.0% |
| ! | TGTTGCTCTTTCTCTTTTTC+AGG | + | chr8.4:15585199-15585218 | MS.gene46923:intron | 35.0% |
| ! | TGTTTTCGTATGCATTATGC+AGG | + | chr8.4:15582004-15582023 | MS.gene46923:intron | 35.0% |
| ! | TTCATATTGAAGGTGTGTCT+GGG | - | chr8.4:15581855-15581874 | None:intergenic | 35.0% |
| ! | TTCATCCATTCTTTTCTTCC+TGG | + | chr8.4:15582721-15582740 | MS.gene46923:intron | 35.0% |
| ! | TTGAACTAAATTTCTGGGGA+AGG | + | chr8.4:15586114-15586133 | MS.gene46923:intron | 35.0% |
| !! | ATGCTTGCTGTCTTTAAAAG+AGG | + | chr8.4:15584341-15584360 | MS.gene46923:intron | 35.0% |
| !! | ATGTGTTAGAGTTTGTTGGA+CGG | + | chr8.4:15585298-15585317 | MS.gene46923:intron | 35.0% |
| !! | ATTAACAGCTTGCTAATAGG+AGG | - | chr8.4:15585030-15585049 | None:intergenic | 35.0% |
| !! | CTGCATTTGCTATTGGTTAT+TGG | + | chr8.4:15585711-15585730 | MS.gene46923:CDS | 35.0% |
| !! | GTTGCTCTTTCTCTTTTTCA+GGG | + | chr8.4:15585200-15585219 | MS.gene46923:intron | 35.0% |
| !! | GTTTTAGTCCCTACAATTGT+GGG | + | chr8.4:15585248-15585267 | MS.gene46923:CDS | 35.0% |
| !!! | AATCAGAGAAGTACTTTTGC+AGG | - | chr8.4:15584614-15584633 | None:intergenic | 35.0% |
| !!! | TAATTTTCTCATACTGGCTC+AGG | - | chr8.4:15583059-15583078 | None:intergenic | 35.0% |
| !!! | TCTTGCAACTGGTCTTATTT+TGG | + | chr8.4:15584113-15584132 | MS.gene46923:CDS | 35.0% |
| !!! | TGTTTTAGTCCCTACAATTG+TGG | + | chr8.4:15585247-15585266 | MS.gene46923:CDS | 35.0% |
| AAACCAAAGAGACCGAGAAA+AGG | - | chr8.4:15586368-15586387 | None:intergenic | 40.0% | |
| AACCCAAGCCAAGAGTAAAT+AGG | - | chr8.4:15583362-15583381 | None:intergenic | 40.0% | |
| AACTTCATCCAGGGATAACA+CGG | - | chr8.4:15584734-15584753 | None:intergenic | 40.0% | |
| AAGCCTTAGACTTACCCAAA+CGG | - | chr8.4:15583106-15583125 | None:intergenic | 40.0% | |
| AAGTCGTCTTTGTCATCAAC+GGG | - | chr8.4:15586507-15586526 | None:intergenic | 40.0% | |
| ACAACAAGAAAAGCTAGAGG+TGG | - | chr8.4:15586007-15586026 | None:intergenic | 40.0% | |
| ACGAGTTAGCTAATTTAGGG+CGG | + | chr8.4:15582029-15582048 | MS.gene46923:intron | 40.0% | |
| ACTTGTATGGGATCAGGTTT+CGG | - | chr8.4:15584381-15584400 | None:intergenic | 40.0% | |
| AGAAGTGGCAGACATCAATA+TGG | - | chr8.4:15583900-15583919 | None:intergenic | 40.0% | |
| AGACCTATTTACTCTTGGCT+TGG | + | chr8.4:15583356-15583375 | MS.gene46923:CDS | 40.0% | |
| ATACCTGGACTATAGCATAG+CGG | + | chr8.4:15582304-15582323 | MS.gene46923:intron | 40.0% | |
| ATCTTACCTCCCACAATTGT+AGG | - | chr8.4:15585260-15585279 | None:intergenic | 40.0% | |
| ATCTTCTGTAATTTGGCGGT+AGG | - | chr8.4:15586033-15586052 | None:intergenic | 40.0% | |
| CAACAAGAAAAGCTAGAGGT+GGG | - | chr8.4:15586006-15586025 | None:intergenic | 40.0% | |
| CCAGTAGCAACAATTGGATT+AGG | - | chr8.4:15581666-15581685 | None:intergenic | 40.0% | |
| CCTAATCCAATTGTTGCTAC+TGG | + | chr8.4:15581663-15581682 | MS.gene46923:CDS | 40.0% | |
| CCTCTCCATAATTCTCAGTA+AGG | - | chr8.4:15581924-15581943 | None:intergenic | 40.0% | |
| CCTTACTGAGAATTATGGAG+AGG | + | chr8.4:15581921-15581940 | MS.gene46923:intron | 40.0% | |
| CTATGTTAAGTCCTACAACC+AGG | - | chr8.4:15583796-15583815 | None:intergenic | 40.0% | |
| GACCTATTTACTCTTGGCTT+GGG | + | chr8.4:15583357-15583376 | MS.gene46923:CDS | 40.0% | |
| GAGACAGACCTATTTACTCT+TGG | + | chr8.4:15583351-15583370 | MS.gene46923:CDS | 40.0% | |
| GATAGATATTGTGCGTGATG+TGG | - | chr8.4:15585762-15585781 | None:intergenic | 40.0% | |
| GCACAATATCTATCGAGTGT+GGG | + | chr8.4:15585768-15585787 | MS.gene46923:CDS | 40.0% | |
| GCATGCCTTACTGAGAATTA+TGG | + | chr8.4:15581916-15581935 | MS.gene46923:intron | 40.0% | |
| GCATTTAGAAGTGAGTTGCA+GGG | + | chr8.4:15581639-15581658 | MS.gene46923:CDS | 40.0% | |
| TAGTCCATCTAGCGTCAAAA+AGG | + | chr8.4:15581700-15581719 | MS.gene46923:CDS | 40.0% | |
| TCTTACCTCCCACAATTGTA+GGG | - | chr8.4:15585259-15585278 | None:intergenic | 40.0% | |
| TCTTTCTGCAGCTAGTTACA+TGG | + | chr8.4:15583258-15583277 | MS.gene46923:intron | 40.0% | |
| TCTTTGTCATCAACGGGAAT+TGG | - | chr8.4:15586501-15586520 | None:intergenic | 40.0% | |
| TGCAAAGCAAGAATGACAAG+TGG | - | chr8.4:15585590-15585609 | None:intergenic | 40.0% | |
| TGCAATGAAAAAGCCTAGCA+CGG | - | chr8.4:15583577-15583596 | None:intergenic | 40.0% | |
| TGCATTTAGAAGTGAGTTGC+AGG | + | chr8.4:15581638-15581657 | MS.gene46923:CDS | 40.0% | |
| TGCTATAGTCCAGGTATAGT+CGG | - | chr8.4:15582301-15582320 | None:intergenic | 40.0% | |
| TGTTATGGGAAGAGTGGAAA+AGG | - | chr8.4:15582278-15582297 | None:intergenic | 40.0% | |
| TTAGCACCAGTAGCAACAAT+TGG | - | chr8.4:15581672-15581691 | None:intergenic | 40.0% | |
| TTAGGTGTGTGTTTGGATTG+CGG | - | chr8.4:15584552-15584571 | None:intergenic | 40.0% | |
| TTATGGAGAGGGATGTGTAA+TGG | + | chr8.4:15581933-15581952 | MS.gene46923:intron | 40.0% | |
| ! | AACCACTCTTTTTCCCGTTT+GGG | + | chr8.4:15583089-15583108 | MS.gene46923:CDS | 40.0% |
| ! | CGGTACAAGAAAGCCTTTTT+AGG | - | chr8.4:15584532-15584551 | None:intergenic | 40.0% |
| ! | CTTCATATTGAAGGTGTGTC+TGG | - | chr8.4:15581856-15581875 | None:intergenic | 40.0% |
| ! | GAACTAAATTTCTGGGGAAG+GGG | + | chr8.4:15586116-15586135 | MS.gene46923:intron | 40.0% |
| ! | GTTTCTTTGTGTGGGTTACT+TGG | + | chr8.4:15583853-15583872 | MS.gene46923:intron | 40.0% |
| ! | TAAACTGTTGGCTAAAAGGG+TGG | - | chr8.4:15585553-15585572 | None:intergenic | 40.0% |
| ! | TAACCACTCTTTTTCCCGTT+TGG | + | chr8.4:15583088-15583107 | MS.gene46923:CDS | 40.0% |
| ! | TTTCCTTTTCTCGGTCTCTT+TGG | + | chr8.4:15586362-15586381 | MS.gene46923:intron | 40.0% |
| !! | GCGGAAGTGTTAAAAACTCA+AGG | + | chr8.4:15585650-15585669 | MS.gene46923:CDS | 40.0% |
| !! | TCCATAATCTTTGAGACGGA+GGG | - | chr8.4:15582594-15582613 | None:intergenic | 40.0% |
| !! | TGACTTTAACTTGTATGCGC+AGG | + | chr8.4:15583184-15583203 | MS.gene46923:intron | 40.0% |
| !! | TGTGTTAGAGTTTGTTGGAC+GGG | + | chr8.4:15585299-15585318 | MS.gene46923:intron | 40.0% |
| !! | TTTGACGCTAGATGGACTAA+GGG | - | chr8.4:15581699-15581718 | None:intergenic | 40.0% |
| !!! | GCTAGGCTTTTTCATTGCAA+TGG | + | chr8.4:15583578-15583597 | MS.gene46923:CDS | 40.0% |
| !!! | TTTTGACGCTAGATGGACTA+AGG | - | chr8.4:15581700-15581719 | None:intergenic | 40.0% |
| AACTTACTGGGCTTGCACAA+AGG | - | chr8.4:15585504-15585523 | None:intergenic | 45.0% | |
| AAGACAGTTCTTACAGCAGC+TGG | - | chr8.4:15583242-15583261 | None:intergenic | 45.0% | |
| AGCCTTAGACTTACCCAAAC+GGG | - | chr8.4:15583105-15583124 | None:intergenic | 45.0% | |
| AGTGCTTTGTACCTGGTTGT+AGG | + | chr8.4:15583782-15583801 | MS.gene46923:intron | 45.0% | |
| ATCACGGTCACACCTTTGAT+AGG | + | chr8.4:15585460-15585479 | MS.gene46923:CDS | 45.0% | |
| ATGCAGCAGCATGTAAAGCA+AGG | - | chr8.4:15585697-15585716 | None:intergenic | 45.0% | |
| ATTACTGCCGTAATGCAGCT+TGG | + | chr8.4:15586441-15586460 | MS.gene46923:intron | 45.0% | |
| ATTCCGCTATGCTATAGTCC+AGG | - | chr8.4:15582310-15582329 | None:intergenic | 45.0% | |
| CAGAAGGAACAGCTACAAGT+GGG | - | chr8.4:15586301-15586320 | None:intergenic | 45.0% | |
| CGCACAATATCTATCGAGTG+TGG | + | chr8.4:15585767-15585786 | MS.gene46923:CDS | 45.0% | |
| GAAAAAGCAATCTGAGCCTG+AGG | - | chr8.4:15582492-15582511 | None:intergenic | 45.0% | |
| GAACCATACCTTACACCAAG+TGG | - | chr8.4:15585350-15585369 | None:intergenic | 45.0% | |
| GAACTTACAGCAGCATCAAC+AGG | - | chr8.4:15584937-15584956 | None:intergenic | 45.0% | |
| GCAATGAAAAAGCCTAGCAC+GGG | - | chr8.4:15583576-15583595 | None:intergenic | 45.0% | |
| GCATTAACAGTCGTGGATAG+TGG | - | chr8.4:15582441-15582460 | None:intergenic | 45.0% | |
| GCTATAGCATTGCCACATAG+CGG | + | chr8.4:15582393-15582412 | MS.gene46923:intron | 45.0% | |
| GGTTTCCTCATGCTGTCTAT+GGG | + | chr8.4:15583378-15583397 | MS.gene46923:CDS | 45.0% | |
| GTTGATGCTGCTGTAAGTTC+TGG | + | chr8.4:15584937-15584956 | MS.gene46923:intron | 45.0% | |
| TACCCAAACGGGAAAAAGAG+TGG | - | chr8.4:15583094-15583113 | None:intergenic | 45.0% | |
| TATACAAGCAATGGGCCTAG+TGG | + | chr8.4:15581894-15581913 | MS.gene46923:intron | 45.0% | |
| TATTTGATCAAGCCCGTGCT+AGG | + | chr8.4:15583561-15583580 | MS.gene46923:CDS | 45.0% | |
| TCAAACCCATAGACAGCATG+AGG | - | chr8.4:15583386-15583405 | None:intergenic | 45.0% | |
| TCAGCTTTGCGTGTTTGAAG+AGG | - | chr8.4:15584658-15584677 | None:intergenic | 45.0% | |
| TGCTAAGATGCCAACTCCAT+AGG | - | chr8.4:15585896-15585915 | None:intergenic | 45.0% | |
| TGTTTGTCCCTTACAGTCCA+CGG | - | chr8.4:15583447-15583466 | None:intergenic | 45.0% | |
| TTAGTCCCTACAATTGTGGG+AGG | + | chr8.4:15585251-15585270 | MS.gene46923:CDS | 45.0% | |
| TTCCCGTTTGGGTAAGTCTA+AGG | + | chr8.4:15583100-15583119 | MS.gene46923:intron | 45.0% | |
| TTGTATGCGCAGGTCATCTT+GGG | + | chr8.4:15583194-15583213 | MS.gene46923:intron | 45.0% | |
| ! | AACAGACTAGCCCTTCATAC+AGG | - | chr8.4:15582124-15582143 | None:intergenic | 45.0% |
| !! | AGATGTTCCTGAAAGTGCTG+GGG | + | chr8.4:15583032-15583051 | MS.gene46923:CDS | 45.0% |
| !! | ATGTGTCTCCACTTGGTGTA+AGG | + | chr8.4:15585339-15585358 | MS.gene46923:intron | 45.0% |
| !! | ATTTTGGTCTCGTGTTGTCC+TGG | + | chr8.4:15584129-15584148 | MS.gene46923:CDS | 45.0% |
| !! | CATGCTGCTGCATTTGCTAT+TGG | + | chr8.4:15585704-15585723 | MS.gene46923:CDS | 45.0% |
| !! | CCAGGTATAGTCGGTGTTAT+GGG | - | chr8.4:15582292-15582311 | None:intergenic | 45.0% |
| !! | CTTGAAAGGTGCTAATTGCC+AGG | - | chr8.4:15585226-15585245 | None:intergenic | 45.0% |
| !! | GAGATGTTCCTGAAAGTGCT+GGG | + | chr8.4:15583031-15583050 | MS.gene46923:CDS | 45.0% |
| !! | GTCCATAATCTTTGAGACGG+AGG | - | chr8.4:15582595-15582614 | None:intergenic | 45.0% |
| !! | TCCAGGTATAGTCGGTGTTA+TGG | - | chr8.4:15582293-15582312 | None:intergenic | 45.0% |
| !! | TCTCCACTTGGTGTAAGGTA+TGG | + | chr8.4:15585344-15585363 | MS.gene46923:intron | 45.0% |
| !!! | TCTTTCTCTTTTTCAGGGCC+TGG | + | chr8.4:15585205-15585224 | MS.gene46923:intron | 45.0% |
| !!! | ATTTCTTTAATTTTTTTTTT+TGG | + | chr8.4:15583602-15583621 | MS.gene46923:intron | 5.0% |
| ACATTTGATGCCTGACCTCC+AGG | - | chr8.4:15584150-15584169 | None:intergenic | 50.0% | |
| ACTCCCACCAAGCTGCATTA+CGG | - | chr8.4:15586451-15586470 | None:intergenic | 50.0% | |
| AGAGAGAGCAACGTTTCCCT+TGG | - | chr8.4:15584187-15584206 | None:intergenic | 50.0% | |
| AGGAACAGCTACAAGTGGGT+TGG | - | chr8.4:15586297-15586316 | None:intergenic | 50.0% | |
| ATCTATCGAGTGTGGGATGC+AGG | + | chr8.4:15585775-15585794 | MS.gene46923:CDS | 50.0% | |
| CAGACAACACTGACAGCAGA+AGG | - | chr8.4:15586317-15586336 | None:intergenic | 50.0% | |
| CTCCTAACGAAGCTTCTAGC+TGG | + | chr8.4:15584901-15584920 | MS.gene46923:CDS | 50.0% | |
| CTTGTATGCGCAGGTCATCT+TGG | + | chr8.4:15583193-15583212 | MS.gene46923:intron | 50.0% | |
| GACCAGCTAGAAGCTTCGTT+AGG | - | chr8.4:15584906-15584925 | None:intergenic | 50.0% | |
| GCAGAAGGAACAGCTACAAG+TGG | - | chr8.4:15586302-15586321 | None:intergenic | 50.0% | |
| GCAGCATGTAAAGCAAGGAC+TGG | - | chr8.4:15585692-15585711 | None:intergenic | 50.0% | |
| GCCCTCCGTCTCAAAGATTA+TGG | + | chr8.4:15582590-15582609 | MS.gene46923:intron | 50.0% | |
| GCTAGAAGCTTCGTTAGGAG+TGG | - | chr8.4:15584901-15584920 | None:intergenic | 50.0% | |
| GGGTTTCCTCATGCTGTCTA+TGG | + | chr8.4:15583377-15583396 | MS.gene46923:CDS | 50.0% | |
| GTGCTCTAGCTGTGTATTGG+AGG | + | chr8.4:15586469-15586488 | MS.gene46923:CDS | 50.0% | |
| TACTGGGCTTGCACAAAGGA+GGG | - | chr8.4:15585500-15585519 | None:intergenic | 50.0% | |
| TCTCAGTAAGGCATGCCACT+AGG | - | chr8.4:15581912-15581931 | None:intergenic | 50.0% | |
| TGCTGTCAGTGTTGTCTGCA+TGG | + | chr8.4:15586319-15586338 | MS.gene46923:CDS | 50.0% | |
| TGTATGCGCAGGTCATCTTG+GGG | + | chr8.4:15583195-15583214 | MS.gene46923:intron | 50.0% | |
| TGTCAGTGTTGTCTGCATGG+CGG | + | chr8.4:15586322-15586341 | MS.gene46923:CDS | 50.0% | |
| TGTCTGCATGGCGGTAAGAT+AGG | + | chr8.4:15586331-15586350 | MS.gene46923:intron | 50.0% | |
| TGTTTGCAGAGCTCTGCACT+TGG | + | chr8.4:15586245-15586264 | MS.gene46923:intron | 50.0% | |
| TTACTGGGCTTGCACAAAGG+AGG | - | chr8.4:15585501-15585520 | None:intergenic | 50.0% | |
| ! | AAGCTAGAGGTGGGTTCTCT+TGG | - | chr8.4:15585997-15586016 | None:intergenic | 50.0% |
| ! | AGAGGTGGGTTCTCTTGGTA+TGG | - | chr8.4:15585992-15586011 | None:intergenic | 50.0% |
| ! | CCCATAACACCGACTATACC+TGG | + | chr8.4:15582289-15582308 | MS.gene46923:intron | 50.0% |
| ! | CTAGTTGATGCACTGTGCTG+TGG | + | chr8.4:15584016-15584035 | MS.gene46923:intron | 50.0% |
| ! | GAGGTGGGTTCTCTTGGTAT+GGG | - | chr8.4:15585991-15586010 | None:intergenic | 50.0% |
| ! | GCGAAATCCGTGGACTGTAA+GGG | + | chr8.4:15583437-15583456 | MS.gene46923:intron | 50.0% |
| ! | GGAACAAGGGAAGAGTGCAT+TGG | + | chr8.4:15582248-15582267 | MS.gene46923:intron | 50.0% |
| ! | GGAGATGTTCCTGAAAGTGC+TGG | + | chr8.4:15583030-15583049 | MS.gene46923:CDS | 50.0% |
| ! | GGAGTGCTCTAGCTGTGTAT+TGG | + | chr8.4:15586466-15586485 | MS.gene46923:CDS | 50.0% |
| ! | TGCGAAATCCGTGGACTGTA+AGG | + | chr8.4:15583436-15583455 | MS.gene46923:intron | 50.0% |
| ! | TTTTCAGATCGGGCAAGTCG+CGG | + | chr8.4:15585631-15585650 | MS.gene46923:intron | 50.0% |
| !! | AGTCGGTGTTATGGGAAGAG+TGG | - | chr8.4:15582284-15582303 | None:intergenic | 50.0% |
| !! | CAGCTGGCTTGTAAATACCG+AGG | - | chr8.4:15583226-15583245 | None:intergenic | 50.0% |
| !! | GATGTTCCTGAAAGTGCTGG+GGG | + | chr8.4:15583033-15583052 | MS.gene46923:CDS | 50.0% |
| !! | GTGTTTTTGCAGGTGGGTGT+GGG | + | chr8.4:15583525-15583544 | MS.gene46923:intron | 50.0% |
| !! | TGTGTTTTTGCAGGTGGGTG+TGG | + | chr8.4:15583524-15583543 | MS.gene46923:intron | 50.0% |
| !! | TGTTTTTGCAGGTGGGTGTG+GGG | + | chr8.4:15583526-15583545 | MS.gene46923:intron | 50.0% |
| ACTGCCGTAATGCAGCTTGG+TGG | + | chr8.4:15586444-15586463 | MS.gene46923:intron | 55.0% | |
| CTGCCGTAATGCAGCTTGGT+GGG | + | chr8.4:15586445-15586464 | MS.gene46923:intron | 55.0% | |
| CTTTCGGCTCCTCTTGCAAC+TGG | + | chr8.4:15584102-15584121 | MS.gene46923:CDS | 55.0% | |
| GAAACTGACGCACGCCATCT+TGG | - | chr8.4:15581816-15581835 | None:intergenic | 55.0% | |
| GACGATGTCTGCGAAATCCG+TGG | + | chr8.4:15583427-15583446 | MS.gene46923:CDS | 55.0% | |
| GTATGCGCAGGTCATCTTGG+GGG | + | chr8.4:15583196-15583215 | MS.gene46923:intron | 55.0% | |
| TTGGTCTCGTGTTGTCCTGG+AGG | + | chr8.4:15584132-15584151 | MS.gene46923:CDS | 55.0% | |
| CAGCTGTGCCGTGTTATCCC+TGG | + | chr8.4:15584723-15584742 | MS.gene46923:intron | 60.0% | |
| CTCGTGTTGTCCTGGAGGTC+AGG | + | chr8.4:15584137-15584156 | MS.gene46923:CDS | 60.0% | |
| GGCGTGCGTCAGTTTCGTGT+TGG | + | chr8.4:15581820-15581839 | MS.gene46923:intron | 60.0% | |
| GTCATCTTGGGGGCTCTCCT+CGG | + | chr8.4:15583206-15583225 | MS.gene46923:CDS | 60.0% | |
| TGGGCTTGCACAAAGGAGGG+TGG | - | chr8.4:15585497-15585516 | None:intergenic | 60.0% | |
| CTCAGGCCCCCAGCACTTTC+AGG | - | chr8.4:15583042-15583061 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 15581613 | 15586536 | 15581613 | ID=MS.gene46923 |
| chr8.4 | mRNA | 15581613 | 15586536 | 15581613 | ID=MS.gene46923.t1;Parent=MS.gene46923 |
| chr8.4 | exon | 15581613 | 15581721 | 15581613 | ID=MS.gene46923.t1.exon1;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15581613 | 15581721 | 15581613 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15582990 | 15583110 | 15582990 | ID=MS.gene46923.t1.exon2;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15582990 | 15583110 | 15582990 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15583206 | 15583247 | 15583206 | ID=MS.gene46923.t1.exon3;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15583206 | 15583247 | 15583206 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15583339 | 15583452 | 15583339 | ID=MS.gene46923.t1.exon4;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15583339 | 15583452 | 15583339 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15583537 | 15583599 | 15583537 | ID=MS.gene46923.t1.exon5;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15583537 | 15583599 | 15583537 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15584093 | 15584220 | 15584093 | ID=MS.gene46923.t1.exon6;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15584093 | 15584220 | 15584093 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15584867 | 15584948 | 15584867 | ID=MS.gene46923.t1.exon7;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15584867 | 15584948 | 15584867 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15585221 | 15585272 | 15585221 | ID=MS.gene46923.t1.exon8;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15585221 | 15585272 | 15585221 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15585419 | 15585516 | 15585419 | ID=MS.gene46923.t1.exon9;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15585419 | 15585516 | 15585419 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15585638 | 15585796 | 15585638 | ID=MS.gene46923.t1.exon10;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15585638 | 15585796 | 15585638 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15586254 | 15586343 | 15586254 | ID=MS.gene46923.t1.exon11;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15586254 | 15586343 | 15586254 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| chr8.4 | exon | 15586459 | 15586536 | 15586459 | ID=MS.gene46923.t1.exon12;Parent=MS.gene46923.t1 |
| chr8.4 | CDS | 15586459 | 15586536 | 15586459 | ID=cds.MS.gene46923.t1;Parent=MS.gene46923.t1 |
| Gene Sequence |
| Protein sequence |
